Rmu_sc0006475.1_g000008

Lignin degradation and detoxification of lignin-derived products

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006475.1
Physical Location & Seq
Reverse (-)
55596 .. 58000
2405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006475.1_g000008.1.cds

Sequence Viewer

Length: 1599 bp
atgaaatccctgaagagaactactggtccagtgatgtcgacacagtttccagtattcgctgtccttattatcatcctacagatcttcatctctctggcccgagccgaagtgcattactacgattttatagttaaggaggtaaacttcacaagactgtgcgagtcaaagctcatgttagtagtaaacgagagttttccgggtccagaattacgagctcgcaaaggggatacaatttatgttaatgtttacaatcaaggattttatggtttcaccattcactggcaagtcccatcacacgacctccctatttgtttgttgcatggagtaaagcaaccaagaaatccatggtttgatggcccggaatatgtgacacaatgcccaatttcaccgggaacaaattttacctatcaagttcaattgaccacagaagaaggaactgtatggtggcatgctcatagtgactggacgagagctagcgttcacggtaccattgtcgtcttgcctgctcttggaacaacatttccatttcctgagcccgatgaagaggagagcattgtgtttggatcttggtatttgggaaatttgaaacaaacgattgacgagtgtatggtgccagaaaatgctaccaacttacccgaagcagatgcttacacaataaatggccaacctggggattttgctctatgctccaagaattcaacatatcgtcttaaggtggactatggcaagacgtatcttcttcggatactgaacgccaacattgatgcggagatgtactttgctattgctgagcacaatctcactatggttggcatggacgaaccagcatacgacttcctcaggaaaattagaagcttagccaccccagaatatcctataaatgtcccaaaagagagtgacgttactaagagaatgtatataacagcttcctccaacgctctttactgtactccagatttaggtcccacatgtgtcaacatatcttgggctgcaagcgtcaataatattagttgggttaatccatcagaatctatcttgcaagcctactacaacaacataagcgaaccagtttatgaaacagacttcccagatgagccgcctgtttattttaacttcactgatgattcatcagcaatagatgtaggcttaacagtccaagggacaaaggtgacgatgctggaatacaatgaaacagttgagatggtgtttcaaggaactgatgtggagggagcggccgtgaatcatccaatgcacgtgcatggacttagcttttatgtgcttggttttggttttgggaattacttcgccgagagggactcaaaaaccttcaatttgattgatcctccttatgtagcaacgttcataactccaaaaaatggatgggtagctctcagattcgtagcgaataatccaggtgtatggttttggcattgtcatatggagagacacttgacatggggtatggagtctgcttttatagtgaagaacgggggcacacctgagactactatgctccctcctccggctacaatgccttcctgtgacgttccattgaagtcttcagccatcctagagaagcaactagaacggactaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

532

Amino Acids

59.98

Weight (kDa)

4.98

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 485
AccB1I GGYRCC 2 cut(s) 485, 610
AccB7I CCANNNNNTGG 2 cut(s) 279, 1376
AccBSI CCGCTC 1 cut(s) 1232
AccI GTMKAC 1 cut(s) 38
AciI CCGC 3 cut(s) 767, 1097, 1232
AclI AACGTT 1 cut(s) 1358
AclWI GGATC 2 cut(s) 571, 1334
AcoI YGGCCR 2 cut(s) 661, 1233
AcsI RAATTY 3 cut(s) 397, 580, 694
AcuI CTGAAG 2 cut(s) 32, 1545
AcvI CACGTG 1 cut(s) 1255
AfaI GTAC 3 cut(s) 487, 776, 949
AfiI CCNNNNNNNGG 6 cut(s) 279, 509, 670, 959, 1376, 1522
AflII CTTAAG 1 cut(s) 710
AflIII ACRYGT 1 cut(s) 968
AgsI TTSAA 6 cut(s) 416, 586, 699, 1211, 1330, 1555
AjnI CCWGG 2 cut(s) 667, 1411
AloI GAACNNNNNNTCC 4 cut(s) 10, 42, 505, 537
AluBI AGCT 7 cut(s) 169, 215, 473, 855, 926, 1269, 1388
AluI AGCT 7 cut(s) 169, 215, 473, 855, 926, 1269, 1388
Alw21I GWGCWC 2 cut(s) 217, 795
Alw26I GTCTC 2 cut(s) 1438, 1496
AlwI GGATC 2 cut(s) 571, 1334
Ama87I CYCGRG 1 cut(s) 99
AoxI GGCC 4 cut(s) 96, 355, 661, 1233
ApeKI GCWGC 1 cut(s) 989
ApoI RAATTY 3 cut(s) 397, 580, 694
Asp700I GAANNNNTTC 1 cut(s) 1301
Asp718I GGTACC 1 cut(s) 485
AspS9I GGNCC 5 cut(s) 26, 97, 200, 356, 962
AsuC2I CCSGG 3 cut(s) 198, 359, 390
AsuHPI GGTGA 3 cut(s) 262, 378, 1180
AsuNHI GCTAGC 1 cut(s) 473
AvaI CYCGRG 1 cut(s) 99
AvaII GGWCC 3 cut(s) 26, 200, 962
AxyI CCTNAGG 1 cut(s) 839
BaeGI GKGCMC 1 cut(s) 1496
BaeI ACNNNNGTAYC 2 cut(s) 477, 510
BalI TGGCCA 1 cut(s) 663
BanI GGYRCC 2 cut(s) 485, 610
BanII GRGCYC 2 cut(s) 217, 537
BbrPI CACGTG 1 cut(s) 1255
BbsI GAAGAC 1 cut(s) 1551
Bbv12I GWGCWC 2 cut(s) 217, 795
BbvI GCAGC 1 cut(s) 976
BccI CCATC 6 cut(s) 298, 347, 1030, 1195, 1374, 1574
BceAI ACGGC 1 cut(s) 1220
BcgI CGANNNNNNTGC 2 cut(s) 626, 660
BciT130I CCWGG 2 cut(s) 669, 1413
BciVI GTATCC 2 cut(s) 220, 738
BcnI CCSGG 3 cut(s) 198, 359, 390
BcoDI GTCTC 2 cut(s) 1438, 1496
BfaI CTAG 3 cut(s) 474, 1571, 1583
BfmI CTRYAG 1 cut(s) 77
BfrI CTTAAG 1 cut(s) 710
BfuI GTATCC 2 cut(s) 220, 738
BglII AGATCT 1 cut(s) 81
BisI GCNGC 3 cut(s) 990, 1097, 1233
BlpI GCTNAGC 2 cut(s) 789, 856
BlsI GCNGC 3 cut(s) 991, 1098, 1234
Bme1390I CCNGG 5 cut(s) 198, 359, 390, 669, 1413
Bme18I GGWCC 3 cut(s) 26, 200, 962
BmeT110I CYCGRG 1 cut(s) 99
BmgT120I GGNCC 5 cut(s) 26, 97, 200, 356, 962
BmiI GGNNCC 4 cut(s) 201, 487, 612, 964
BmrFI CCNGG 5 cut(s) 198, 359, 390, 669, 1413
BmsI GCATC 3 cut(s) 634, 754, 1164
BmtI GCTAGC 1 cut(s) 477
BpiI GAAGAC 1 cut(s) 1551
BplI GAGNNNNNCTC 2 cut(s) 1301, 1333
BpmI CTGGAG 1 cut(s) 936
Bpu10I CCTNAGC 1 cut(s) 531
Bpu1102I GCTNAGC 2 cut(s) 789, 856
BpuMI CCSGG 3 cut(s) 198, 359, 390
BsaAI YACGTR 1 cut(s) 1255
BsaBI GATNNNNATC 1 cut(s) 86
BsaJI CCNNGG 3 cut(s) 344, 668, 1156
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 1221, 1251
Bsc4I CCNNNNNNNGG 6 cut(s) 279, 509, 670, 959, 1376, 1522
Bse1I ACTGG 6 cut(s) 28, 29, 50, 284, 467, 1067
Bse21I CCTNAGG 1 cut(s) 839
Bse8I GATNNNNATC 1 cut(s) 86
BseBI CCWGG 2 cut(s) 669, 1413
BseDI CCNNGG 3 cut(s) 344, 668, 1156
BseGI GGATG 4 cut(s) 72, 1243, 1385, 1566
BseJI GATNNNNATC 1 cut(s) 86
BseLI CCNNNNNNNGG 6 cut(s) 279, 509, 670, 959, 1376, 1522
BseMII CTCAG 5 cut(s) 522, 780, 853, 1405, 1491
BseNI ACTGG 6 cut(s) 28, 29, 50, 284, 467, 1067
BseRI GAGGAG 2 cut(s) 560, 1509
BseSI GKGCMC 1 cut(s) 1496
BseX3I CGGCCG 1 cut(s) 1233
BseXI GCAGC 1 cut(s) 976
Bsh1285I CGRYCG 1 cut(s) 1236
BshFI GGCC 4 cut(s) 98, 357, 663, 1235
BshNI GGYRCC 2 cut(s) 485, 610
BsiEI CGRYCG 1 cut(s) 1236
BsiHKAI GWGCWC 2 cut(s) 217, 795
BsiHKCI CYCGRG 1 cut(s) 99
BsiSI CCGG 4 cut(s) 197, 359, 389, 1523
BslFI GGGAC 5 cut(s) 272, 869, 948, 1174, 1328
BslI CCNNNNNNNGG 6 cut(s) 279, 509, 670, 959, 1376, 1522
BsmAI GTCTC 2 cut(s) 1438, 1496
BsmFI GGGAC 5 cut(s) 272, 869, 948, 1174, 1328
BsnI GGCC 4 cut(s) 98, 357, 663, 1235
BsoBI CYCGRG 1 cut(s) 99
Bsp1286I GDGCHC 4 cut(s) 217, 537, 795, 1496
Bsp143I GATC 3 cut(s) 81, 563, 1339
Bsp1720I GCTNAGC 2 cut(s) 789, 856
Bsp19I CCATGG 1 cut(s) 344
BspACI CCGC 3 cut(s) 767, 1097, 1232
BspANI GGCC 4 cut(s) 98, 357, 663, 1235
BspCNI CTCAG 5 cut(s) 523, 781, 852, 1404, 1492
BspLI GGNNCC 4 cut(s) 201, 487, 612, 964
BspOI GCTAGC 1 cut(s) 477
BspPI GGATC 2 cut(s) 571, 1334
BspT107I GGYRCC 2 cut(s) 485, 610
BspTI CTTAAG 1 cut(s) 710
BsrBI CCGCTC 1 cut(s) 1232
BsrI ACTGG 6 cut(s) 28, 29, 50, 284, 467, 1067
BssECI CCNNGG 3 cut(s) 344, 668, 1156
BssMI GATC 3 cut(s) 81, 563, 1339
BssT1I CCWWGG 2 cut(s) 344, 1156
Bst2UI CCWGG 2 cut(s) 669, 1413
Bst4CI ACNGT 7 cut(s) 45, 156, 439, 485, 947, 1153, 1195
Bst6I CTCTTC 2 cut(s) 8, 537
BstAFI CTTAAG 1 cut(s) 710
BstBAI YACGTR 1 cut(s) 1255
BstC8I GCNNGC 6 cut(s) 217, 450, 475, 504, 994, 1041
BstDEI CTNAG 8 cut(s) 531, 789, 839, 856, 906, 1265, 1391, 1500
BstDSI CCRYGG 1 cut(s) 344
BstF5I GGATG 4 cut(s) 72, 1243, 1385, 1566
BstKTI GATC 3 cut(s) 84, 566, 1342
BstMAI GTCTC 2 cut(s) 1438, 1496
BstMBI GATC 3 cut(s) 81, 563, 1339
BstMCI CGRYCG 1 cut(s) 1236
BstNI CCWGG 2 cut(s) 669, 1413
BstNSI RCATGY 2 cut(s) 452, 972
BstSCI CCNGG 5 cut(s) 196, 357, 388, 667, 1411
BstSFI CTRYAG 1 cut(s) 77
BstSLI GKGCMC 1 cut(s) 1496
BstV1I GCAGC 1 cut(s) 976
BstV2I GAAGAC 1 cut(s) 1551
BstX2I RGATCY 2 cut(s) 81, 563
BstXI CCANNNNNNTGG 1 cut(s) 1419
BstYI RGATCY 2 cut(s) 81, 563
BstZI CGGCCG 1 cut(s) 1233
Bsu36I CCTNAGG 1 cut(s) 839
BsuI GTATCC 2 cut(s) 220, 738
BsuRI GGCC 4 cut(s) 98, 357, 663, 1235
BtgI CCRYGG 1 cut(s) 344
BtsCI GGATG 4 cut(s) 72, 1243, 1385, 1566
BtsIMutI CAGTG 3 cut(s) 36, 277, 1116
Cac8I GCNNGC 6 cut(s) 217, 450, 475, 504, 994, 1041
Cfr13I GGNCC 5 cut(s) 26, 97, 200, 356, 962
CseI GACGC 1 cut(s) 985
Csp6I GTAC 3 cut(s) 486, 775, 948
CviAII CATG 8 cut(s) 172, 320, 345, 449, 814, 969, 1259, 1455
CviQI GTAC 3 cut(s) 486, 775, 948
DdeI CTNAG 8 cut(s) 531, 789, 839, 856, 906, 1265, 1391, 1500
DpnI GATC 3 cut(s) 83, 565, 1341
DpnII GATC 3 cut(s) 81, 563, 1339
EaeI YGGCCR 2 cut(s) 661, 1233
EagI CGGCCG 1 cut(s) 1233
Eam1104I CTCTTC 2 cut(s) 8, 537
EarI CTCTTC 2 cut(s) 8, 537
Ecl136II GAGCTC 1 cut(s) 215
EclXI CGGCCG 1 cut(s) 1233
Eco130I CCWWGG 2 cut(s) 344, 1156
Eco24I GRGCYC 2 cut(s) 217, 537
Eco47I GGWCC 3 cut(s) 26, 200, 962
Eco52I CGGCCG 1 cut(s) 1233
Eco53kI GAGCTC 1 cut(s) 215
Eco57I CTGAAG 2 cut(s) 32, 1545
Eco72I CACGTG 1 cut(s) 1255
Eco81I CCTNAGG 1 cut(s) 839
Eco88I CYCGRG 1 cut(s) 99
EcoICRI GAGCTC 1 cut(s) 215
EcoO109I RGGNCCY 1 cut(s) 962
EcoRI GAATTC 1 cut(s) 694
EcoRII CCWGG 2 cut(s) 667, 1411
EcoT14I CCWWGG 2 cut(s) 344, 1156
EcoT38I GRGCYC 2 cut(s) 217, 537
ErhI CCWWGG 2 cut(s) 344, 1156
FaeI CATG 8 cut(s) 175, 323, 348, 452, 817, 972, 1262, 1458
FaqI GGGAC 5 cut(s) 272, 869, 948, 1174, 1328
FatI CATG 8 cut(s) 171, 319, 344, 448, 813, 968, 1258, 1454
FauNDI CATATG 1 cut(s) 1437
FblI GTMKAC 1 cut(s) 38
Fnu4HI GCNGC 3 cut(s) 990, 1097, 1233
FokI GGATG 4 cut(s) 59, 1230, 1392, 1553
FriOI GRGCYC 2 cut(s) 217, 537
Fsp4HI GCNGC 3 cut(s) 990, 1097, 1233
FspBI CTAG 3 cut(s) 474, 1571, 1583
GluI GCNGC 3 cut(s) 990, 1097, 1233
GsuI CTGGAG 1 cut(s) 936
HaeIII GGCC 4 cut(s) 98, 357, 663, 1235
HapII CCGG 4 cut(s) 197, 359, 389, 1523
HgaI GACGC 1 cut(s) 985
Hin1II CATG 8 cut(s) 175, 323, 348, 452, 817, 972, 1262, 1458
HincII GTYRAC 2 cut(s) 39, 976
HindII GTYRAC 2 cut(s) 39, 976
HindIII AAGCTT 1 cut(s) 853
HinfI GANTC 7 cut(s) 161, 1028, 1124, 1240, 1316, 1395, 1466
HpaII CCGG 4 cut(s) 197, 359, 389, 1523
HphI GGTGA 3 cut(s) 262, 378, 1180
Hpy166II GTNNAC 7 cut(s) 39, 142, 184, 247, 481, 718, 976
Hpy188I TCNGA 3 cut(s) 744, 1027, 1394
Hpy188III TCNNGA 4 cut(s) 203, 530, 841, 953
Hpy8I GTNNAC 7 cut(s) 39, 142, 184, 247, 481, 718, 976
HpyAV CCTTC 3 cut(s) 425, 1336, 1545
HpyCH4III ACNGT 7 cut(s) 45, 156, 439, 485, 947, 1153, 1195
HpyCH4IV ACGT 5 cut(s) 731, 900, 1254, 1358, 1545
HpyCH4V TGCA 6 cut(s) 112, 319, 992, 1039, 1252, 1258
HpyF3I CTNAG 8 cut(s) 531, 789, 839, 856, 906, 1265, 1391, 1500
HpySE526I ACGT 5 cut(s) 731, 900, 1254, 1358, 1545
Hsp92II CATG 8 cut(s) 175, 323, 348, 452, 817, 972, 1262, 1458
KpnI GGTACC 1 cut(s) 489
Kzo9I GATC 3 cut(s) 81, 563, 1339
LmnI GCTCC 3 cut(s) 692, 1229, 1518
Lsp1109I GCAGC 1 cut(s) 976
LweI GCATC 3 cut(s) 634, 754, 1164
MaeI CTAG 3 cut(s) 474, 1571, 1583
MaeII ACGT 5 cut(s) 731, 900, 1254, 1358, 1545
MaeIII GTNAC 6 cut(s) 367, 458, 896, 901, 1168, 1541
MalI GATC 3 cut(s) 83, 565, 1341
MbiI CCGCTC 1 cut(s) 1232
MboI GATC 3 cut(s) 81, 563, 1339
MboII GAAGA 8 cut(s) 25, 76, 440, 554, 728, 731, 1495, 1551
MfeI CAATTG 1 cut(s) 416
MflI RGATCY 2 cut(s) 81, 563
MhlI GDGCHC 4 cut(s) 217, 537, 795, 1496
MlsI TGGCCA 1 cut(s) 663
MluNI TGGCCA 1 cut(s) 663
MlyI GAGTC 3 cut(s) 170, 1310, 1475
MmeI TCCRAC 1 cut(s) 957
Mox20I TGGCCA 1 cut(s) 663
MroXI GAANNNNTTC 1 cut(s) 1301
MscI TGGCCA 1 cut(s) 663
MseI TTAA 7 cut(s) 132, 240, 711, 1017, 1110, 1148, 1597
MslI CAYNNNNRTG 1 cut(s) 1257
Msp20I TGGCCA 1 cut(s) 663
MspCI CTTAAG 1 cut(s) 710
MspI CCGG 4 cut(s) 197, 359, 389, 1523
MspR9I CCNGG 5 cut(s) 198, 359, 390, 669, 1413
MunI CAATTG 1 cut(s) 416
MvaI CCWGG 2 cut(s) 669, 1413
NciI CCSGG 3 cut(s) 198, 359, 390
NcoI CCATGG 1 cut(s) 344
NdeI CATATG 1 cut(s) 1437
NdeII GATC 3 cut(s) 81, 563, 1339
NheI GCTAGC 1 cut(s) 473
NlaIII CATG 8 cut(s) 175, 323, 348, 452, 817, 972, 1262, 1458
NlaIV GGNNCC 4 cut(s) 201, 487, 612, 964
NmeAIII GCCGAG 1 cut(s) 1333
NmuCI GTSAC 5 cut(s) 367, 458, 896, 1168, 1541
NspI RCATGY 2 cut(s) 452, 972
PaeI GCATGC 1 cut(s) 452
PciI ACATGT 1 cut(s) 968
PdmI GAANNNNTTC 1 cut(s) 1301
PfeI GAWTC 4 cut(s) 1028, 1124, 1240, 1395
PflMI CCANNNNNTGG 2 cut(s) 279, 1376
PkrI GCNGC 3 cut(s) 991, 1098, 1234
PleI GAGTC 3 cut(s) 169, 1310, 1474
PmaCI CACGTG 1 cut(s) 1255
PmlI CACGTG 1 cut(s) 1255
PpsI GAGTC 3 cut(s) 169, 1310, 1474
Ppu21I YACGTR 1 cut(s) 1255
PpuMI RGGWCCY 1 cut(s) 962
PscI ACATGT 1 cut(s) 968
Psp124BI GAGCTC 1 cut(s) 217
Psp1406I AACGTT 1 cut(s) 1358
Psp5II RGGWCCY 1 cut(s) 962
Psp6I CCWGG 2 cut(s) 667, 1411
PspCI CACGTG 1 cut(s) 1255
PspGI CCWGG 2 cut(s) 667, 1411
PspN4I GGNNCC 4 cut(s) 201, 487, 612, 964
PspPI GGNCC 5 cut(s) 26, 97, 200, 356, 962
PspPPI RGGWCCY 1 cut(s) 962
PsrI GAACNNNNNNTAC 2 cut(s) 385, 417
PsuI RGATCY 2 cut(s) 81, 563
RsaI GTAC 3 cut(s) 487, 776, 949
RsaNI GTAC 3 cut(s) 486, 775, 948
RseI CAYNNNNRTG 1 cut(s) 1257
SacI GAGCTC 1 cut(s) 217
SalI GTCGAC 1 cut(s) 37
SaqAI TTAA 7 cut(s) 132, 240, 711, 1017, 1110, 1148, 1597
SatI GCNGC 3 cut(s) 990, 1097, 1233
Sau3AI GATC 3 cut(s) 81, 563, 1339
Sau96I GGNCC 5 cut(s) 26, 97, 200, 356, 962
SchI GAGTC 3 cut(s) 170, 1310, 1475
ScrFI CCNGG 5 cut(s) 198, 359, 390, 669, 1413
SduI GDGCHC 4 cut(s) 217, 537, 795, 1496
SfaNI GCATC 3 cut(s) 634, 754, 1164
SfcI CTRYAG 1 cut(s) 77
SinI GGWCC 3 cut(s) 26, 200, 962
SmiMI CAYNNNNRTG 1 cut(s) 1257
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
SphI GCATGC 1 cut(s) 452
SsiI CCGC 3 cut(s) 767, 1097, 1232
SspI AATATT 1 cut(s) 1006
SspMI CTAG 3 cut(s) 474, 1571, 1583
SstI GAGCTC 1 cut(s) 217
StyD4I CCNGG 5 cut(s) 196, 357, 388, 667, 1411
StyI CCWWGG 2 cut(s) 344, 1156
TaaI ACNGT 7 cut(s) 45, 156, 439, 485, 947, 1153, 1195
TaiI ACGT 5 cut(s) 734, 903, 1257, 1361, 1548
TaqI TCGA 1 cut(s) 38
TatI WGTACW 2 cut(s) 774, 947
TauI GCSGC 2 cut(s) 1099, 1235
TfiI GAWTC 4 cut(s) 1028, 1124, 1240, 1395
Tru1I TTAA 7 cut(s) 132, 240, 711, 1017, 1110, 1148, 1597
Tru9I TTAA 7 cut(s) 132, 240, 711, 1017, 1110, 1148, 1597
TscAI CASTG 3 cut(s) 36, 284, 1123
TseFI GTSAC 5 cut(s) 367, 458, 896, 1168, 1541
TseI GCWGC 1 cut(s) 989
Tsp45I GTSAC 5 cut(s) 367, 458, 896, 1168, 1541
TspDTI ATGAA 7 cut(s) 17, 76, 555, 1089, 1116, 1203, 1351
TspRI CASTG 3 cut(s) 36, 284, 1123
Van91I CCANNNNNTGG 2 cut(s) 279, 1376
Vha464I CTTAAG 1 cut(s) 710
VpaK11BI GGWCC 3 cut(s) 26, 200, 962
XapI RAATTY 3 cut(s) 397, 580, 694
XceI RCATGY 2 cut(s) 452, 972
XcmI CCANNNNNNNNNTGG 2 cut(s) 342, 1377
XmiI GTMKAC 1 cut(s) 38
XmnI GAANNNNTTC 1 cut(s) 1301
XspI CTAG 3 cut(s) 474, 1571, 1583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.