FvH4_6g39983

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000320
Physical Location & Seq
Reverse (-)
31578149 .. 31580632
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39983.t1

Sequence Viewer

Length: 1788 bp
ATGGCGACACAGTTTCTAGTGTTCGCTGTTCTTATTGTCATCCTACTGGTGTTCAGCTCTTTTGCTCAATGCGAAGTGCATTACCATGATTTTATAGTTAAGGAGGTAAACTTCACTAGATTGTGTGAAACAAAGCTCATGTTAGTAGTAAACGAGAGTTATCCAGGTCCAGCAATACGAGCTCGCAAAGGAGACACTATTTATGTTAATGTCTACAATAAAGGATATTACGGATTCACCATTCACTGGCATGGTGTAAAACAACCAAGAAATCCATGGTTTGATGGCCCAGAATATGTGACACAATGTCCAATCTTACCTGGTACTAATTTTACCTATCAAGTTCAGTTGAGCACAGAAGAAGGAACACTATGGTGGCATGCTCATAGTGATTGGACTAGAGCAAGCGTTCACGGTGCCATTGTTGTATTGCCTGCTCTTGTAACAACATTTCCATTTCCGGAGCCTGATGAAGAGGAGATCATTGTGTTCGGATCTTGGTACTTGGGAAATTTGAAAGAAGAAGTCGACGAGTGTTTGGACCCTGCTACTAACTCTAACTTACCCATAGCAGATGGTTACACAATCAATGGCCGACTTGGGGATTTTTCTGCATGCTCCCAAAATACAACTTATCGTCGCAAGGTGGACTACGGCAAGACATATCTTCTTCGGATAGTAAACGCAAACATCGATGTAGAGTTTTACTTCGCCATTGCTGAACACAGCCTCACTGTGGTTGGCTTGGACGGCTCCTATACCAAACCTATCAACACAGGCTATATACTGATAGCCCCTGGACAAACAATGGATGTGTTGCTCAACGCAAGTTCGTCTTTGGGAAGGTATTACATGGTCGGAAGAGAATACATAAGCGCTACAGTTGAAACACTCTCCGACACTGCGAATGATGCTATTGCAATCCTCGAATATAATGGAAACTATACCACTTCGGAAACTCCTTTATTTCCTGATCAGATTCCCAATTCCTTATCCCAAGAACCAGCATTCAGCTTCTACGGAAAACTTAGAAGTTTAGCCACCCCAGAATATCCTGCAAGTGTCCCAAAAGAAAGTGAGGTTACTACCAGAATGTACATAACAGCTTCTGCCAACGCTCTTTACTGTACTGAAGATTTAGGTCCCTCATGTGTTAACATATCTTTTGCTGCAAGCGTCAATAATATTAGCTGGGCTAATCCGAGGGAATCTGTCTTGCAAGCCTACTACAAAAACATAAGCGAGCCGGTTTATGAAACAGATTTCCCAGACGAGCCACCTACTTATTTTAACTTCACTGAAATAGCAATGACACTAGATCCAGTGCTAACAGTCCAAGGGACAAAGGTGAAGGTGCTAGAGTATAATGAAACAGTTGAGATGGTGTTTCAAGGCACTGATGTGATGGGAGGTTCTGTAAATCATCCAATGCACTTGCATGGACATAGCTTTTTTGTGCTTGGATTTGGTTTTGGGAATTACTTAGCCCAGAGGGACTCAAAAACTTTTAATTTGATTGATCCTCCGTATGTAGCAACGTTCATCACTCCAAAAAATGGATGGTTAGCTACCAGATTCGTAGCGAATAACCCAGGTGTGTGGTTTTGGCATTGTCATATGGAGAGACATTTGTCATGGGGTATGGAGTCTGCTTTTATAGTGAAGAACGGGGGCACACCGGAGACTACAATGCTCCCTCCTCCGGCTACAATGCCTTCCTGTGATGTTCCACTGGATTCTTCTACTATCCTAAGGCATGCGGAATTAAGTAAAAATCAACTAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

596

Amino Acids

66.65

Weight (kDa)

5.01

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 33 - 145 4.3e-38 Multicopper oxidase
Cu-oxidase PF00394 160 - 314 3.2e-30 Multicopper oxidase
Cu-oxidase_2 PF07731 421 - 556 9.3e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 416
AccB7I CCANNNNNTGG 2 cut(s) 246, 1556
AccI GTMKAC 2 cut(s) 213, 528
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 1 cut(s) 1760
AclI AACGTT 1 cut(s) 1538
AclWI GGATC 3 cut(s) 502, 1313, 1514
AcoI YGGCCR 1 cut(s) 592
AcsI RAATTY 1 cut(s) 511
AcuI CTGAAG 1 cut(s) 1152
AfaI GTAC 4 cut(s) 325, 503, 1097, 1129
AfeI AGCGCT 1 cut(s) 877
AfiI CCNNNNNNNGG 5 cut(s) 246, 601, 736, 1556, 1702
AgsI TTSAA 3 cut(s) 517, 887, 1391
AhdI GACNNNNNGTC 1 cut(s) 306
AjnI CCWGG 4 cut(s) 163, 319, 796, 1591
AleI CACNNNNGTG 2 cut(s) 373, 1400
AluBI AGCT 8 cut(s) 57, 136, 182, 1014, 1106, 1191, 1449, 1568
AluI AGCT 8 cut(s) 57, 136, 182, 1014, 1106, 1191, 1449, 1568
Alw21I GWGCWC 2 cut(s) 184, 356
Alw26I GTCTC 3 cut(s) 186, 1618, 1676
AlwI GGATC 3 cut(s) 502, 1313, 1514
AlwNI CAGNNNCTG 1 cut(s) 1109
Aor13HI TCCGGA 1 cut(s) 460
Aor51HI AGCGCT 1 cut(s) 877
AoxI GGCC 2 cut(s) 286, 592
ApeKI GCWGC 1 cut(s) 1169
ApoI RAATTY 1 cut(s) 511
AspLEI GCGC 1 cut(s) 878
AspS9I GGNCC 4 cut(s) 167, 287, 541, 1142
AsuHPI GGTGA 2 cut(s) 229, 1360
AvaII GGWCC 3 cut(s) 167, 541, 1142
AxyI CCTNAGG 1 cut(s) 1751
BaeGI GKGCMC 1 cut(s) 1676
BanI GGYRCC 1 cut(s) 416
BanII GRGCYC 1 cut(s) 184
Bbv12I GWGCWC 2 cut(s) 184, 356
BbvI GCAGC 1 cut(s) 1156
BccI CCATC 5 cut(s) 278, 569, 1375, 1399, 1554
BceAI ACGGC 2 cut(s) 670, 766
BciT130I CCWGG 4 cut(s) 165, 321, 798, 1593
BclI TGATCA 1 cut(s) 973
BcoDI GTCTC 3 cut(s) 186, 1618, 1676
BfaI CTAG 5 cut(s) 17, 117, 399, 1316, 1358
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 1 cut(s) 879
BisI GCNGC 1 cut(s) 1170
BlsI GCNGC 1 cut(s) 1171
Bme1390I CCNGG 4 cut(s) 165, 321, 798, 1593
Bme18I GGWCC 3 cut(s) 167, 541, 1142
BmeRI GACNNNNNGTC 1 cut(s) 306
BmgT120I GGNCC 4 cut(s) 167, 287, 541, 1142
BmiI GGNNCC 5 cut(s) 418, 465, 543, 754, 1144
BmrFI CCNGG 4 cut(s) 165, 321, 798, 1593
BmsI GCATC 1 cut(s) 901
BoxI GACNNNNGTC 1 cut(s) 1630
Bsa29I ATCGAT 1 cut(s) 693
BsaJI CCNNGG 5 cut(s) 275, 796, 1202, 1336, 1591
BsaWI WCCGGW 2 cut(s) 460, 1678
BsaXI ACNNNNNCTCC 2 cut(s) 1401, 1431
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 601, 736, 1556, 1702
Bse118I RCCGGY 1 cut(s) 1246
Bse1I ACTGG 4 cut(s) 51, 251, 1322, 1737
Bse21I CCTNAGG 1 cut(s) 1751
Bse3DI GCAATG 2 cut(s) 714, 1314
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 4 cut(s) 165, 321, 798, 1593
BseCI ATCGAT 1 cut(s) 693
BseDI CCNNGG 5 cut(s) 275, 796, 1202, 1336, 1591
BseGI GGATG 4 cut(s) 39, 817, 1423, 1565
BseLI CCNNNNNNNGG 5 cut(s) 246, 601, 736, 1556, 1702
BseMI GCAATG 2 cut(s) 714, 1314
BseNI ACTGG 4 cut(s) 51, 251, 1322, 1737
BseRI GAGGAG 2 cut(s) 491, 1689
BseSI GKGCMC 1 cut(s) 1676
BseXI GCAGC 1 cut(s) 1156
BseYI CCCAGC 1 cut(s) 1191
BshFI GGCC 2 cut(s) 288, 594
BshNI GGYRCC 1 cut(s) 416
BshVI ATCGAT 1 cut(s) 693
BsiHKAI GWGCWC 2 cut(s) 184, 356
BsiSI CCGG 4 cut(s) 461, 1247, 1679, 1703
BslFI GGGAC 4 cut(s) 1049, 1128, 1354, 1508
BslI CCNNNNNNNGG 5 cut(s) 246, 601, 736, 1556, 1702
BsmAI GTCTC 3 cut(s) 186, 1618, 1676
BsmFI GGGAC 4 cut(s) 1049, 1128, 1354, 1508
BsmI GAATGC 1 cut(s) 1007
BsnI GGCC 2 cut(s) 288, 594
Bsp1286I GDGCHC 3 cut(s) 184, 356, 1676
Bsp13I TCCGGA 1 cut(s) 460
Bsp1407I TGTACA 1 cut(s) 1095
Bsp143I GATC 5 cut(s) 480, 494, 973, 1318, 1519
Bsp19I CCATGG 1 cut(s) 275
BspACI CCGC 1 cut(s) 1760
BspANI GGCC 2 cut(s) 288, 594
BspDI ATCGAT 1 cut(s) 693
BspEI TCCGGA 1 cut(s) 460
BspLI GGNNCC 5 cut(s) 418, 465, 543, 754, 1144
BspPI GGATC 3 cut(s) 502, 1313, 1514
BspT107I GGYRCC 1 cut(s) 416
BsrDI GCAATG 2 cut(s) 714, 1314
BsrFI RCCGGY 1 cut(s) 1246
BsrGI TGTACA 1 cut(s) 1095
BsrI ACTGG 4 cut(s) 51, 251, 1322, 1737
BssAI RCCGGY 1 cut(s) 1246
BssECI CCNNGG 5 cut(s) 275, 796, 1202, 1336, 1591
BssMI GATC 5 cut(s) 480, 494, 973, 1318, 1519
BssT1I CCWWGG 2 cut(s) 275, 1336
Bst2UI CCWGG 4 cut(s) 165, 321, 798, 1593
Bst4CI ACNGT 7 cut(s) 12, 416, 736, 883, 1127, 1333, 1375
Bst6I CTCTTC 2 cut(s) 468, 856
BstAUI TGTACA 1 cut(s) 1095
BstC8I GCNNGC 9 cut(s) 184, 381, 406, 435, 616, 1174, 1221, 1244, 1758
BstDEI CTNAG 3 cut(s) 1028, 1483, 1751
BstDSI CCRYGG 1 cut(s) 275
BstF5I GGATG 4 cut(s) 39, 817, 1423, 1565
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 1 cut(s) 878
BstKTI GATC 5 cut(s) 483, 497, 976, 1321, 1522
BstMAI GTCTC 3 cut(s) 186, 1618, 1676
BstMBI GATC 5 cut(s) 480, 494, 973, 1318, 1519
BstMWI GCNNNNNNNGC 3 cut(s) 179, 750, 911
BstNI CCWGG 4 cut(s) 165, 321, 798, 1593
BstNSI RCATGY 3 cut(s) 383, 618, 1760
BstPAI GACNNNNGTC 1 cut(s) 1630
BstSCI CCNGG 4 cut(s) 163, 319, 796, 1591
BstSFI CTRYAG 1 cut(s) 879
BstSLI GKGCMC 1 cut(s) 1676
BstV1I GCAGC 1 cut(s) 1156
BstX2I RGATCY 2 cut(s) 494, 1318
BstXI CCANNNNNNTGG 1 cut(s) 1599
BstYI RGATCY 2 cut(s) 494, 1318
Bsu15I ATCGAT 1 cut(s) 693
Bsu36I CCTNAGG 1 cut(s) 1751
BsuRI GGCC 2 cut(s) 288, 594
BsuTUI ATCGAT 1 cut(s) 693
BtgI CCRYGG 1 cut(s) 275
BtsCI GGATG 4 cut(s) 39, 817, 1423, 1565
BtsI GCAGTG 1 cut(s) 900
BtsIMutI CAGTG 7 cut(s) 244, 732, 900, 1296, 1329, 1395, 1730
Cac8I GCNNGC 9 cut(s) 184, 381, 406, 435, 616, 1174, 1221, 1244, 1758
CaiI CAGNNNCTG 1 cut(s) 1109
CfoI GCGC 1 cut(s) 878
Cfr10I RCCGGY 1 cut(s) 1246
Cfr13I GGNCC 4 cut(s) 167, 287, 541, 1142
ClaI ATCGAT 1 cut(s) 693
CseI GACGC 1 cut(s) 1165
CsiI ACCWGGT 1 cut(s) 319
Csp6I GTAC 4 cut(s) 324, 502, 1096, 1128
CviQI GTAC 4 cut(s) 324, 502, 1096, 1128
DdeI CTNAG 3 cut(s) 1028, 1483, 1751
DpnI GATC 5 cut(s) 482, 496, 975, 1320, 1521
DpnII GATC 5 cut(s) 480, 494, 973, 1318, 1519
DriI GACNNNNNGTC 1 cut(s) 306
EaeI YGGCCR 1 cut(s) 592
Eam1104I CTCTTC 2 cut(s) 468, 856
Eam1105I GACNNNNNGTC 1 cut(s) 306
EarI CTCTTC 2 cut(s) 468, 856
Ecl136II GAGCTC 1 cut(s) 182
Eco130I CCWWGG 2 cut(s) 275, 1336
Eco24I GRGCYC 1 cut(s) 184
Eco47I GGWCC 3 cut(s) 167, 541, 1142
Eco47III AGCGCT 1 cut(s) 877
Eco53kI GAGCTC 1 cut(s) 182
Eco57I CTGAAG 1 cut(s) 1152
Eco81I CCTNAGG 1 cut(s) 1751
EcoICRI GAGCTC 1 cut(s) 182
EcoO109I RGGNCCY 1 cut(s) 1142
EcoRII CCWGG 4 cut(s) 163, 319, 796, 1591
EcoT14I CCWWGG 2 cut(s) 275, 1336
EcoT38I GRGCYC 1 cut(s) 184
ErhI CCWWGG 2 cut(s) 275, 1336
FalI AAGNNNNNCTT 2 cut(s) 820, 852
FaqI GGGAC 4 cut(s) 1049, 1128, 1354, 1508
FauNDI CATATG 1 cut(s) 1617
FbaI TGATCA 1 cut(s) 973
FblI GTMKAC 2 cut(s) 213, 528
Fnu4HI GCNGC 1 cut(s) 1170
FokI GGATG 4 cut(s) 26, 824, 1410, 1572
FriOI GRGCYC 1 cut(s) 184
Fsp4HI GCNGC 1 cut(s) 1170
FspBI CTAG 5 cut(s) 17, 117, 399, 1316, 1358
GlaI GCGC 1 cut(s) 877
GluI GCNGC 1 cut(s) 1170
GsaI CCCAGC 1 cut(s) 1195
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 2 cut(s) 288, 594
HapII CCGG 4 cut(s) 461, 1247, 1679, 1703
HgaI GACGC 1 cut(s) 1165
HhaI GCGC 1 cut(s) 878
Hin6I GCGC 1 cut(s) 876
HinP1I GCGC 1 cut(s) 876
HincII GTYRAC 2 cut(s) 529, 1156
HindII GTYRAC 2 cut(s) 529, 1156
HinfI GANTC 7 cut(s) 234, 979, 1208, 1496, 1575, 1646, 1736
HpaI GTTAAC 1 cut(s) 1156
HpaII CCGG 4 cut(s) 461, 1247, 1679, 1703
HphI GGTGA 2 cut(s) 229, 1360
Hpy166II GTNNAC 8 cut(s) 109, 151, 214, 412, 529, 649, 682, 1156
Hpy188I TCNGA 7 cut(s) 494, 675, 860, 898, 955, 978, 1203
Hpy188III TCNNGA 2 cut(s) 461, 971
Hpy8I GTNNAC 8 cut(s) 109, 151, 214, 412, 529, 649, 682, 1156
Hpy99I CGWCG 2 cut(s) 533, 642
HpyAV CCTTC 4 cut(s) 356, 837, 1345, 1725
HpyCH4III ACNGT 7 cut(s) 12, 416, 736, 883, 1127, 1333, 1375
HpyCH4IV ACGT 1 cut(s) 1538
HpyCH4V TGCA 8 cut(s) 79, 614, 920, 1058, 1172, 1219, 1432, 1438
HpyF10VI GCNNNNNNNGC 3 cut(s) 179, 750, 911
HpyF3I CTNAG 3 cut(s) 1028, 1483, 1751
HpySE526I ACGT 1 cut(s) 1538
HspAI GCGC 1 cut(s) 876
Kpn2I TCCGGA 1 cut(s) 460
Ksp22I TGATCA 1 cut(s) 973
KspAI GTTAAC 1 cut(s) 1156
Kzo9I GATC 5 cut(s) 480, 494, 973, 1318, 1519
LmnI GCTCC 4 cut(s) 463, 623, 758, 1698
Lsp1109I GCAGC 1 cut(s) 1156
LweI GCATC 1 cut(s) 901
MabI ACCWGGT 1 cut(s) 319
MaeI CTAG 5 cut(s) 17, 117, 399, 1316, 1358
MaeII ACGT 1 cut(s) 1538
MaeIII GTNAC 4 cut(s) 298, 442, 578, 1081
MalI GATC 5 cut(s) 482, 496, 975, 1320, 1521
MboI GATC 5 cut(s) 480, 494, 973, 1318, 1519
MboII GAAGA 9 cut(s) 371, 485, 533, 659, 662, 873, 1145, 1675, 1731
MflI RGATCY 2 cut(s) 494, 1318
MhlI GDGCHC 3 cut(s) 184, 356, 1676
MluCI AATT 6 cut(s) 328, 511, 985, 1477, 1510, 1763
MlyI GAGTC 2 cut(s) 1490, 1655
MmeI TCCRAC 2 cut(s) 838, 921
MroI TCCGGA 1 cut(s) 460
MseI TTAA 6 cut(s) 99, 207, 1155, 1290, 1509, 1766
MslI CAYNNNNRTG 5 cut(s) 84, 249, 373, 1400, 1437
MspI CCGG 4 cut(s) 461, 1247, 1679, 1703
MspR9I CCNGG 4 cut(s) 165, 321, 798, 1593
Mva1269I GAATGC 1 cut(s) 1007
MvaI CCWGG 4 cut(s) 165, 321, 798, 1593
MwoI GCNNNNNNNGC 3 cut(s) 179, 750, 911
NcoI CCATGG 1 cut(s) 275
NdeI CATATG 1 cut(s) 1617
NdeII GATC 5 cut(s) 480, 494, 973, 1318, 1519
NlaIV GGNNCC 5 cut(s) 418, 465, 543, 754, 1144
NmuCI GTSAC 1 cut(s) 298
NspI RCATGY 3 cut(s) 383, 618, 1760
OliI CACNNNNGTG 2 cut(s) 373, 1400
PaeI GCATGC 3 cut(s) 383, 618, 1760
PcsI WCGNNNNNNNCGW 1 cut(s) 690
PctI GAATGC 1 cut(s) 1007
PfeI GAWTC 5 cut(s) 234, 979, 1208, 1575, 1736
PflMI CCANNNNNTGG 2 cut(s) 246, 1556
PkrI GCNGC 1 cut(s) 1171
PleI GAGTC 2 cut(s) 1490, 1654
PpsI GAGTC 2 cut(s) 1490, 1654
PpuMI RGGWCCY 1 cut(s) 1142
PshAI GACNNNNGTC 1 cut(s) 1630
Psp124BI GAGCTC 1 cut(s) 184
Psp1406I AACGTT 1 cut(s) 1538
Psp5II RGGWCCY 1 cut(s) 1142
Psp6I CCWGG 4 cut(s) 163, 319, 796, 1591
PspFI CCCAGC 1 cut(s) 1191
PspGI CCWGG 4 cut(s) 163, 319, 796, 1591
PspN4I GGNNCC 5 cut(s) 418, 465, 543, 754, 1144
PspPI GGNCC 4 cut(s) 167, 287, 541, 1142
PspPPI RGGWCCY 1 cut(s) 1142
PstNI CAGNNNCTG 1 cut(s) 1109
PsuI RGATCY 2 cut(s) 494, 1318
RsaI GTAC 4 cut(s) 325, 503, 1097, 1129
RsaNI GTAC 4 cut(s) 324, 502, 1096, 1128
RseI CAYNNNNRTG 5 cut(s) 84, 249, 373, 1400, 1437
SacI GAGCTC 1 cut(s) 184
SalI GTCGAC 1 cut(s) 527
SaqAI TTAA 6 cut(s) 99, 207, 1155, 1290, 1509, 1766
SatI GCNGC 1 cut(s) 1170
Sau3AI GATC 5 cut(s) 480, 494, 973, 1318, 1519
Sau96I GGNCC 4 cut(s) 167, 287, 541, 1142
SchI GAGTC 2 cut(s) 1490, 1655
ScrFI CCNGG 4 cut(s) 165, 321, 798, 1593
SduI GDGCHC 3 cut(s) 184, 356, 1676
SexAI ACCWGGT 1 cut(s) 319
SfaNI GCATC 1 cut(s) 901
SfcI CTRYAG 1 cut(s) 879
SinI GGWCC 3 cut(s) 167, 541, 1142
SmiMI CAYNNNNRTG 5 cut(s) 84, 249, 373, 1400, 1437
SphI GCATGC 3 cut(s) 383, 618, 1760
Sse9I AATT 6 cut(s) 328, 511, 985, 1477, 1510, 1763
SsiI CCGC 1 cut(s) 1760
SspI AATATT 1 cut(s) 1186
SspMI CTAG 5 cut(s) 17, 117, 399, 1316, 1358
SstI GAGCTC 1 cut(s) 184
StyD4I CCNGG 4 cut(s) 163, 319, 796, 1591
StyI CCWWGG 2 cut(s) 275, 1336
TaaI ACNGT 7 cut(s) 12, 416, 736, 883, 1127, 1333, 1375
TaiI ACGT 1 cut(s) 1541
TaqI TCGA 3 cut(s) 528, 693, 927
TasI AATT 6 cut(s) 328, 511, 985, 1477, 1510, 1763
TatI WGTACW 2 cut(s) 1095, 1127
TfiI GAWTC 5 cut(s) 234, 979, 1208, 1575, 1736
Tru1I TTAA 6 cut(s) 99, 207, 1155, 1290, 1509, 1766
Tru9I TTAA 6 cut(s) 99, 207, 1155, 1290, 1509, 1766
TscAI CASTG 7 cut(s) 251, 739, 907, 1303, 1329, 1402, 1737
TseFI GTSAC 1 cut(s) 298
TseI GCWGC 1 cut(s) 1169
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 4 cut(s) 486, 1269, 1383, 1531
TspGWI ACGGA 3 cut(s) 246, 1035, 1515
TspRI CASTG 7 cut(s) 251, 739, 907, 1303, 1329, 1402, 1737
Van91I CCANNNNNTGG 2 cut(s) 246, 1556
VpaK11BI GGWCC 3 cut(s) 167, 541, 1142
XapI RAATTY 1 cut(s) 511
XceI RCATGY 3 cut(s) 383, 618, 1760
XcmI CCANNNNNNNNNTGG 2 cut(s) 273, 1557
XmiI GTMKAC 2 cut(s) 213, 528
XspI CTAG 5 cut(s) 17, 117, 399, 1316, 1358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.