Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 4 cut(s) | 733, 758, 778, 913 |
| AccIII | TCCGGA | 1 cut(s) | 306 |
| AclWI | GGATC | 1 cut(s) | 354 |
| AcsI | RAATTY | 5 cut(s) | 116, 147, 964, 971, 1153 |
| AcuI | CTGAAG | 1 cut(s) | 1107 |
| AcvI | CACGTG | 1 cut(s) | 936 |
| AcyI | GRCGYC | 1 cut(s) | 769 |
| AdeI | CACNNNGTG | 1 cut(s) | 319 |
| AfaI | GTAC | 8 cut(s) | 592, 715, 805, 850, 895, 981, 1088, 1175 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 369, 585, 1106, 1204, 1255 |
| AflIII | ACRYGT | 1 cut(s) | 935 |
| AjnI | CCWGG | 3 cut(s) | 80, 212, 262 |
| AluBI | AGCT | 3 cut(s) | 243, 641, 1186 |
| AluI | AGCT | 3 cut(s) | 243, 641, 1186 |
| Alw21I | GWGCWC | 1 cut(s) | 10 |
| Alw26I | GTCTC | 2 cut(s) | 604, 776 |
| AlwI | GGATC | 1 cut(s) | 354 |
| Ama87I | CYCGRG | 1 cut(s) | 946 |
| Aor13HI | TCCGGA | 1 cut(s) | 306 |
| AoxI | GGCC | 8 cut(s) | 12, 33, 54, 599, 812, 857, 902, 1206 |
| ApoI | RAATTY | 5 cut(s) | 116, 147, 964, 971, 1153 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 723 |
| AspLEI | GCGC | 1 cut(s) | 704 |
| AsuC2I | CCSGG | 2 cut(s) | 37, 58 |
| AsuHPI | GGTGA | 5 cut(s) | 67, 115, 214, 470, 1037 |
| AvaI | CYCGRG | 1 cut(s) | 946 |
| BauI | CACGAG | 1 cut(s) | 906 |
| BbrPI | CACGTG | 1 cut(s) | 936 |
| Bbv12I | GWGCWC | 1 cut(s) | 10 |
| BccI | CCATC | 2 cut(s) | 416, 420 |
| BceAI | ACGGC | 1 cut(s) | 1221 |
| BciT130I | CCWGG | 3 cut(s) | 82, 214, 264 |
| BcnI | CCSGG | 2 cut(s) | 37, 58 |
| BcoDI | GTCTC | 2 cut(s) | 604, 776 |
| BfaI | CTAG | 3 cut(s) | 240, 585, 624 |
| BfmI | CTRYAG | 2 cut(s) | 268, 690 |
| BmcAI | AGTACT | 4 cut(s) | 592, 715, 805, 895 |
| Bme1390I | CCNGG | 5 cut(s) | 37, 58, 82, 214, 264 |
| BmeT110I | CYCGRG | 1 cut(s) | 946 |
| BmrFI | CCNGG | 5 cut(s) | 37, 58, 82, 214, 264 |
| BmsI | GCATC | 3 cut(s) | 30, 51, 436 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 277, 309 |
| BpmI | CTGGAG | 1 cut(s) | 64 |
| BpuEI | CTTGAG | 1 cut(s) | 156 |
| BpuMI | CCSGG | 2 cut(s) | 37, 58 |
| BsaAI | YACGTR | 1 cut(s) | 936 |
| BsaHI | GRCGYC | 1 cut(s) | 769 |
| BsaI | GGTCTC | 1 cut(s) | 604 |
| BsaJI | CCNNGG | 1 cut(s) | 183 |
| BsaWI | WCCGGW | 1 cut(s) | 306 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 393, 423 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 369, 585, 1106, 1204, 1255 |
| BseAI | TCCGGA | 1 cut(s) | 306 |
| BseBI | CCWGG | 3 cut(s) | 82, 214, 264 |
| BseDI | CCNNGG | 1 cut(s) | 183 |
| BseGI | GGATG | 1 cut(s) | 431 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 369, 585, 1106, 1204, 1255 |
| BseMII | CTCAG | 5 cut(s) | 267, 431, 741, 997, 1149 |
| BseRI | GAGGAG | 3 cut(s) | 242, 417, 767 |
| BsgI | GTGCAG | 1 cut(s) | 149 |
| BshFI | GGCC | 8 cut(s) | 14, 35, 56, 601, 814, 859, 904, 1208 |
| BsiHKAI | GWGCWC | 1 cut(s) | 10 |
| BsiHKCI | CYCGRG | 1 cut(s) | 946 |
| BsiSI | CCGG | 3 cut(s) | 36, 57, 307 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 369, 585, 1106, 1204, 1255 |
| BsmAI | GTCTC | 2 cut(s) | 604, 776 |
| BsmBI | CGTCTC | 1 cut(s) | 776 |
| BsnI | GGCC | 8 cut(s) | 14, 35, 56, 601, 814, 859, 904, 1208 |
| Bso31I | GGTCTC | 1 cut(s) | 604 |
| BsoBI | CYCGRG | 1 cut(s) | 946 |
| Bsp1286I | GDGCHC | 1 cut(s) | 10 |
| Bsp13I | TCCGGA | 1 cut(s) | 306 |
| Bsp1407I | TGTACA | 1 cut(s) | 1086 |
| Bsp143I | GATC | 2 cut(s) | 94, 359 |
| BspANI | GGCC | 8 cut(s) | 14, 35, 56, 601, 814, 859, 904, 1208 |
| BspCNI | CTCAG | 5 cut(s) | 268, 432, 742, 996, 1150 |
| BspEI | TCCGGA | 1 cut(s) | 306 |
| BspHI | TCATGA | 1 cut(s) | 1212 |
| BspPI | GGATC | 1 cut(s) | 354 |
| BspTNI | GGTCTC | 1 cut(s) | 604 |
| BsrGI | TGTACA | 1 cut(s) | 1086 |
| BssECI | CCNNGG | 1 cut(s) | 183 |
| BssMI | GATC | 2 cut(s) | 94, 359 |
| BssNAI | GTATAC | 1 cut(s) | 759 |
| BssNI | GRCGYC | 1 cut(s) | 769 |
| BssSI | CACGAG | 1 cut(s) | 906 |
| BssT1I | CCWWGG | 1 cut(s) | 183 |
| Bst1107I | GTATAC | 1 cut(s) | 759 |
| Bst2BI | CACGAG | 1 cut(s) | 906 |
| Bst2UI | CCWGG | 3 cut(s) | 82, 214, 264 |
| Bst4CI | ACNGT | 4 cut(s) | 848, 1032, 1101, 1199 |
| Bst6I | CTCTTC | 2 cut(s) | 660, 993 |
| BstACI | GRCGYC | 1 cut(s) | 769 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1269 |
| BstAUI | TGTACA | 1 cut(s) | 1086 |
| BstBAI | YACGTR | 1 cut(s) | 936 |
| BstC8I | GCNNGC | 1 cut(s) | 451 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 583 |
| BstF5I | GGATG | 1 cut(s) | 431 |
| BstHHI | GCGC | 1 cut(s) | 704 |
| BstKTI | GATC | 2 cut(s) | 97, 362 |
| BstMAI | GTCTC | 2 cut(s) | 604, 776 |
| BstMBI | GATC | 2 cut(s) | 94, 359 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1269 |
| BstNI | CCWGG | 3 cut(s) | 82, 214, 264 |
| BstNSI | RCATGY | 2 cut(s) | 1062, 1093 |
| BstSCI | CCNGG | 5 cut(s) | 35, 56, 80, 212, 262 |
| BstSFI | CTRYAG | 2 cut(s) | 268, 690 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1022 |
| BstZ17I | GTATAC | 1 cut(s) | 759 |
| BsuRI | GGCC | 8 cut(s) | 14, 35, 56, 601, 814, 859, 904, 1208 |
| BtsCI | GGATG | 1 cut(s) | 431 |
| BtsIMutI | CAGTG | 1 cut(s) | 273 |
| Cac8I | GCNNGC | 1 cut(s) | 451 |
| CciI | TCATGA | 1 cut(s) | 1212 |
| CfoI | GCGC | 1 cut(s) | 704 |
| CseI | GACGC | 1 cut(s) | 758 |
| Csp6I | GTAC | 8 cut(s) | 591, 714, 804, 849, 894, 980, 1087, 1174 |
| CviAII | CATG | 4 cut(s) | 375, 1059, 1090, 1213 |
| CviQI | GTAC | 8 cut(s) | 591, 714, 804, 849, 894, 980, 1087, 1174 |
| DpnI | GATC | 2 cut(s) | 96, 361 |
| DpnII | GATC | 2 cut(s) | 94, 359 |
| DraIII | CACNNNGTG | 1 cut(s) | 319 |
| Eam1104I | CTCTTC | 2 cut(s) | 660, 993 |
| EarI | CTCTTC | 2 cut(s) | 660, 993 |
| Eco130I | CCWWGG | 1 cut(s) | 183 |
| Eco147I | AGGCCT | 4 cut(s) | 601, 814, 859, 904 |
| Eco31I | GGTCTC | 1 cut(s) | 604 |
| Eco32I | GATATC | 1 cut(s) | 210 |
| Eco57I | CTGAAG | 1 cut(s) | 1107 |
| Eco72I | CACGTG | 1 cut(s) | 936 |
| Eco88I | CYCGRG | 1 cut(s) | 946 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 583 |
| EcoRII | CCWGG | 3 cut(s) | 80, 212, 262 |
| EcoRV | GATATC | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 183 |
| EcoT22I | ATGCAT | 1 cut(s) | 92 |
| ErhI | CCWWGG | 1 cut(s) | 183 |
| Esp3I | CGTCTC | 1 cut(s) | 776 |
| FaeI | CATG | 4 cut(s) | 378, 1062, 1093, 1216 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 227, 259, 1170, 1202 |
| FatI | CATG | 4 cut(s) | 374, 1058, 1089, 1212 |
| FblI | GTMKAC | 4 cut(s) | 733, 758, 778, 913 |
| FokI | GGATG | 1 cut(s) | 438 |
| FspBI | CTAG | 3 cut(s) | 240, 585, 624 |
| GlaI | GCGC | 1 cut(s) | 703 |
| GsuI | CTGGAG | 1 cut(s) | 64 |
| HaeIII | GGCC | 8 cut(s) | 14, 35, 56, 601, 814, 859, 904, 1208 |
| HapII | CCGG | 3 cut(s) | 36, 57, 307 |
| HgaI | GACGC | 1 cut(s) | 758 |
| HhaI | GCGC | 1 cut(s) | 704 |
| Hin1I | GRCGYC | 1 cut(s) | 769 |
| Hin1II | CATG | 4 cut(s) | 378, 1062, 1093, 1216 |
| Hin6I | GCGC | 1 cut(s) | 702 |
| HinP1I | GCGC | 1 cut(s) | 702 |
| HincII | GTYRAC | 2 cut(s) | 28, 49 |
| HindII | GTYRAC | 2 cut(s) | 28, 49 |
| HindIII | AAGCTT | 1 cut(s) | 1184 |
| HinfI | GANTC | 4 cut(s) | 288, 300, 944, 1019 |
| HpaII | CCGG | 3 cut(s) | 36, 57, 307 |
| HphI | GGTGA | 5 cut(s) | 67, 115, 214, 470, 1037 |
| Hpy188I | TCNGA | 6 cut(s) | 297, 441, 844, 970, 986, 1159 |
| Hpy188III | TCNNGA | 3 cut(s) | 307, 1125, 1213 |
| HpyAV | CCTTC | 3 cut(s) | 164, 373, 1219 |
| HpyCH4III | ACNGT | 4 cut(s) | 848, 1032, 1101, 1199 |
| HpyCH4IV | ACGT | 1 cut(s) | 935 |
| HpyCH4V | TGCA | 6 cut(s) | 90, 166, 681, 1048, 1062, 1238 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1269 |
| HpySE526I | ACGT | 1 cut(s) | 935 |
| Hsp92I | GRCGYC | 1 cut(s) | 769 |
| Hsp92II | CATG | 4 cut(s) | 378, 1062, 1093, 1216 |
| HspAI | GCGC | 1 cut(s) | 702 |
| Kpn2I | TCCGGA | 1 cut(s) | 306 |
| Kzo9I | GATC | 2 cut(s) | 94, 359 |
| LmnI | GCTCC | 3 cut(s) | 5, 39, 60 |
| LweI | GCATC | 3 cut(s) | 30, 51, 436 |
| MaeI | CTAG | 3 cut(s) | 240, 585, 624 |
| MaeII | ACGT | 1 cut(s) | 935 |
| MaeIII | GTNAC | 4 cut(s) | 458, 865, 1193, 1199 |
| MalI | GATC | 2 cut(s) | 96, 361 |
| MboI | GATC | 2 cut(s) | 94, 359 |
| MboII | GAAGA | 7 cut(s) | 217, 238, 677, 1010, 1016, 1019, 1113 |
| MhlI | GDGCHC | 1 cut(s) | 10 |
| MlyI | GAGTC | 1 cut(s) | 938 |
| Mph1103I | ATGCAT | 1 cut(s) | 92 |
| MroI | TCCGGA | 1 cut(s) | 306 |
| MroXI | GAANNNNTTC | 1 cut(s) | 723 |
| MseI | TTAA | 2 cut(s) | 347, 660 |
| MspA1I | CMGCKG | 1 cut(s) | 641 |
| MspI | CCGG | 3 cut(s) | 36, 57, 307 |
| MspR9I | CCNGG | 5 cut(s) | 37, 58, 82, 214, 264 |
| MvaI | CCWGG | 3 cut(s) | 82, 214, 264 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1269 |
| NciI | CCSGG | 2 cut(s) | 37, 58 |
| NdeII | GATC | 2 cut(s) | 94, 359 |
| NlaIII | CATG | 4 cut(s) | 378, 1062, 1093, 1216 |
| NmeAIII | GCCGAG | 1 cut(s) | 40 |
| NmuCI | GTSAC | 1 cut(s) | 458 |
| NsiI | ATGCAT | 1 cut(s) | 92 |
| NspI | RCATGY | 2 cut(s) | 1062, 1093 |
| PagI | TCATGA | 1 cut(s) | 1212 |
| PceI | AGGCCT | 4 cut(s) | 601, 814, 859, 904 |
| PdmI | GAANNNNTTC | 1 cut(s) | 723 |
| PfeI | GAWTC | 3 cut(s) | 288, 300, 1019 |
| PfoI | TCCNGGA | 1 cut(s) | 212 |
| PleI | GAGTC | 1 cut(s) | 938 |
| PmaCI | CACGTG | 1 cut(s) | 936 |
| PmlI | CACGTG | 1 cut(s) | 936 |
| PpsI | GAGTC | 1 cut(s) | 938 |
| Ppu21I | YACGTR | 1 cut(s) | 936 |
| Psp6I | CCWGG | 3 cut(s) | 80, 212, 262 |
| PspCI | CACGTG | 1 cut(s) | 936 |
| PspGI | CCWGG | 3 cut(s) | 80, 212, 262 |
| PvuII | CAGCTG | 1 cut(s) | 641 |
| RsaI | GTAC | 8 cut(s) | 592, 715, 805, 850, 895, 981, 1088, 1175 |
| RsaNI | GTAC | 8 cut(s) | 591, 714, 804, 849, 894, 980, 1087, 1174 |
| SaqAI | TTAA | 2 cut(s) | 347, 660 |
| Sau3AI | GATC | 2 cut(s) | 94, 359 |
| ScaI | AGTACT | 4 cut(s) | 592, 715, 805, 895 |
| SchI | GAGTC | 1 cut(s) | 938 |
| ScrFI | CCNGG | 5 cut(s) | 37, 58, 82, 214, 264 |
| SduI | GDGCHC | 1 cut(s) | 10 |
| SfaNI | GCATC | 3 cut(s) | 30, 51, 436 |
| SfcI | CTRYAG | 2 cut(s) | 268, 690 |
| SmlI | CTYRAG | 1 cut(s) | 171 |
| SmoI | CTYRAG | 1 cut(s) | 171 |
| SseBI | AGGCCT | 4 cut(s) | 601, 814, 859, 904 |
| SspMI | CTAG | 3 cut(s) | 240, 585, 624 |
| StuI | AGGCCT | 4 cut(s) | 601, 814, 859, 904 |
| StyD4I | CCNGG | 5 cut(s) | 35, 56, 80, 212, 262 |
| StyI | CCWWGG | 1 cut(s) | 183 |
| TaaI | ACNGT | 4 cut(s) | 848, 1032, 1101, 1199 |
| TaiI | ACGT | 1 cut(s) | 938 |
| TaqI | TCGA | 1 cut(s) | 68 |
| TatI | WGTACW | 6 cut(s) | 590, 713, 803, 893, 979, 1086 |
| TfiI | GAWTC | 3 cut(s) | 288, 300, 1019 |
| Tru1I | TTAA | 2 cut(s) | 347, 660 |
| Tru9I | TTAA | 2 cut(s) | 347, 660 |
| TscAI | CASTG | 1 cut(s) | 280 |
| TseFI | GTSAC | 1 cut(s) | 458 |
| Tsp45I | GTSAC | 1 cut(s) | 458 |
| TspDTI | ATGAA | 3 cut(s) | 469, 1149, 1201 |
| TspGWI | ACGGA | 1 cut(s) | 504 |
| TspRI | CASTG | 1 cut(s) | 280 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 583 |
| XapI | RAATTY | 5 cut(s) | 116, 147, 964, 971, 1153 |
| XceI | RCATGY | 2 cut(s) | 1062, 1093 |
| XmiI | GTMKAC | 4 cut(s) | 733, 758, 778, 913 |
| XmnI | GAANNNNTTC | 1 cut(s) | 723 |
| XspI | CTAG | 3 cut(s) | 240, 585, 624 |
| ZrmI | AGTACT | 4 cut(s) | 592, 715, 805, 895 |
| Zsp2I | ATGCAT | 1 cut(s) | 92 |