Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 3 cut(s) | 309, 387, 465 |
| AccI | GTMKAC | 8 cut(s) | 295, 373, 451, 518, 1420, 1445, 1465, 1600 |
| AccIII | TCCGGA | 1 cut(s) | 990 |
| AciI | CCGC | 4 cut(s) | 309, 387, 465, 537 |
| AclWI | GGATC | 1 cut(s) | 1038 |
| AcsI | RAATTY | 5 cut(s) | 626, 808, 1651, 1658, 1840 |
| AcuI | CTGAAG | 1 cut(s) | 1794 |
| AcvI | CACGTG | 1 cut(s) | 1623 |
| AcyI | GRCGYC | 1 cut(s) | 1456 |
| AdeI | CACNNNGTG | 1 cut(s) | 1003 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1053, 1272, 1793, 1891, 1942 |
| AflIII | ACRYGT | 1 cut(s) | 1622 |
| AjnI | CCWGG | 3 cut(s) | 633, 896, 946 |
| AluBI | AGCT | 9 cut(s) | 242, 320, 398, 476, 766, 927, 1328, 1336, 1873 |
| AluI | AGCT | 9 cut(s) | 242, 320, 398, 476, 766, 927, 1328, 1336, 1873 |
| Alw21I | GWGCWC | 1 cut(s) | 768 |
| Alw26I | GTCTC | 4 cut(s) | 645, 858, 1291, 1463 |
| AlwI | GGATC | 1 cut(s) | 1038 |
| Ama87I | CYCGRG | 2 cut(s) | 767, 1633 |
| Aor13HI | TCCGGA | 1 cut(s) | 990 |
| AoxI | GGCC | 5 cut(s) | 1286, 1499, 1544, 1589, 1893 |
| ApeKI | GCWGC | 3 cut(s) | 317, 395, 473 |
| ApoI | RAATTY | 5 cut(s) | 626, 808, 1651, 1658, 1840 |
| AseI | ATTAAT | 1 cut(s) | 555 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1410 |
| AspLEI | GCGC | 2 cut(s) | 1316, 1391 |
| AspS9I | GGNCC | 1 cut(s) | 47 |
| AsuC2I | CCSGG | 1 cut(s) | 75 |
| AvaI | CYCGRG | 2 cut(s) | 767, 1633 |
| AvaII | GGWCC | 1 cut(s) | 47 |
| BanII | GRGCYC | 2 cut(s) | 175, 768 |
| BauI | CACGAG | 3 cut(s) | 288, 366, 1593 |
| BbrPI | CACGTG | 1 cut(s) | 1623 |
| Bbv12I | GWGCWC | 1 cut(s) | 768 |
| BbvI | GCAGC | 3 cut(s) | 329, 407, 485 |
| BccI | CCATC | 5 cut(s) | 204, 651, 702, 1103, 1107 |
| BceAI | ACGGC | 1 cut(s) | 1908 |
| BciT130I | CCWGG | 3 cut(s) | 635, 898, 948 |
| BclI | TGATCA | 1 cut(s) | 786 |
| BcnI | CCSGG | 1 cut(s) | 75 |
| BcoDI | GTCTC | 4 cut(s) | 645, 858, 1291, 1463 |
| BfaI | CTAG | 4 cut(s) | 678, 924, 981, 1272 |
| BfmI | CTRYAG | 4 cut(s) | 147, 592, 952, 1377 |
| BisI | GCNGC | 3 cut(s) | 318, 396, 474 |
| BlsI | GCNGC | 3 cut(s) | 319, 397, 475 |
| BmcAI | AGTACT | 8 cut(s) | 277, 355, 433, 1279, 1402, 1492, 1537, 1582 |
| Bme1390I | CCNGG | 4 cut(s) | 75, 635, 898, 948 |
| Bme18I | GGWCC | 1 cut(s) | 47 |
| BmeT110I | CYCGRG | 2 cut(s) | 767, 1633 |
| BmgT120I | GGNCC | 1 cut(s) | 47 |
| BmiI | GGNNCC | 1 cut(s) | 48 |
| BmrFI | CCNGG | 4 cut(s) | 75, 635, 898, 948 |
| BmsI | GCATC | 5 cut(s) | 304, 382, 460, 610, 1123 |
| Bpu10I | CCTNAGC | 1 cut(s) | 238 |
| BpuEI | CTTGAG | 3 cut(s) | 185, 833, 840 |
| BpuMI | CCSGG | 1 cut(s) | 75 |
| BsaAI | YACGTR | 1 cut(s) | 1623 |
| BsaBI | GATNNNNATC | 1 cut(s) | 195 |
| BsaHI | GRCGYC | 1 cut(s) | 1456 |
| BsaI | GGTCTC | 1 cut(s) | 1291 |
| BsaWI | WCCGGW | 1 cut(s) | 990 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1080, 1110 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1053, 1272, 1793, 1891, 1942 |
| Bse1I | ACTGG | 3 cut(s) | 267, 345, 501 |
| Bse8I | GATNNNNATC | 1 cut(s) | 195 |
| BseAI | TCCGGA | 1 cut(s) | 990 |
| BseBI | CCWGG | 3 cut(s) | 635, 898, 948 |
| BseGI | GGATG | 4 cut(s) | 215, 630, 713, 1118 |
| BseJI | GATNNNNATC | 1 cut(s) | 195 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1053, 1272, 1793, 1891, 1942 |
| BseMII | CTCAG | 7 cut(s) | 128, 951, 1118, 1428, 1521, 1684, 1836 |
| BseNI | ACTGG | 3 cut(s) | 267, 345, 501 |
| BseRI | GAGGAG | 3 cut(s) | 926, 1104, 1454 |
| BseXI | GCAGC | 3 cut(s) | 329, 407, 485 |
| BseYI | CCCAGC | 1 cut(s) | 1048 |
| BsgI | GTGCAG | 1 cut(s) | 80 |
| BshFI | GGCC | 5 cut(s) | 1288, 1501, 1546, 1591, 1895 |
| BsiHKAI | GWGCWC | 1 cut(s) | 768 |
| BsiHKCI | CYCGRG | 2 cut(s) | 767, 1633 |
| BsiSI | CCGG | 2 cut(s) | 75, 991 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1053, 1272, 1793, 1891, 1942 |
| BsmAI | GTCTC | 4 cut(s) | 645, 858, 1291, 1463 |
| BsmBI | CGTCTC | 1 cut(s) | 1463 |
| BsnI | GGCC | 5 cut(s) | 1288, 1501, 1546, 1591, 1895 |
| Bso31I | GGTCTC | 1 cut(s) | 1291 |
| BsoBI | CYCGRG | 2 cut(s) | 767, 1633 |
| Bsp1286I | GDGCHC | 2 cut(s) | 175, 768 |
| Bsp13I | TCCGGA | 1 cut(s) | 990 |
| Bsp1407I | TGTACA | 1 cut(s) | 1773 |
| Bsp143I | GATC | 3 cut(s) | 88, 786, 1043 |
| BspACI | CCGC | 4 cut(s) | 309, 387, 465, 537 |
| BspANI | GGCC | 5 cut(s) | 1288, 1501, 1546, 1591, 1895 |
| BspCNI | CTCAG | 7 cut(s) | 129, 952, 1119, 1429, 1522, 1683, 1837 |
| BspEI | TCCGGA | 1 cut(s) | 990 |
| BspHI | TCATGA | 1 cut(s) | 1899 |
| BspLI | GGNNCC | 1 cut(s) | 48 |
| BspMAI | CTGCAG | 1 cut(s) | 151 |
| BspPI | GGATC | 1 cut(s) | 1038 |
| BspTNI | GGTCTC | 1 cut(s) | 1291 |
| BsrBI | CCGCTC | 3 cut(s) | 309, 387, 465 |
| BsrGI | TGTACA | 1 cut(s) | 1773 |
| BsrI | ACTGG | 3 cut(s) | 267, 345, 501 |
| BssMI | GATC | 3 cut(s) | 88, 786, 1043 |
| BssNAI | GTATAC | 2 cut(s) | 519, 1446 |
| BssNI | GRCGYC | 1 cut(s) | 1456 |
| BssSI | CACGAG | 3 cut(s) | 288, 366, 1593 |
| Bst1107I | GTATAC | 2 cut(s) | 519, 1446 |
| Bst2BI | CACGAG | 3 cut(s) | 288, 366, 1593 |
| Bst2UI | CCWGG | 3 cut(s) | 635, 898, 948 |
| Bst4CI | ACNGT | 6 cut(s) | 275, 353, 431, 1646, 1719, 1788 |
| Bst6I | CTCTTC | 2 cut(s) | 1347, 1680 |
| BstACI | GRCGYC | 1 cut(s) | 1456 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1956 |
| BstAUI | TGTACA | 1 cut(s) | 1773 |
| BstBAI | YACGTR | 1 cut(s) | 1623 |
| BstC8I | GCNNGC | 2 cut(s) | 1138, 1318 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1270 |
| BstF5I | GGATG | 4 cut(s) | 215, 630, 713, 1118 |
| BstHHI | GCGC | 2 cut(s) | 1316, 1391 |
| BstKTI | GATC | 3 cut(s) | 91, 789, 1046 |
| BstMAI | GTCTC | 4 cut(s) | 645, 858, 1291, 1463 |
| BstMBI | GATC | 3 cut(s) | 88, 786, 1043 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1956 |
| BstNI | CCWGG | 3 cut(s) | 635, 898, 948 |
| BstNSI | RCATGY | 2 cut(s) | 1749, 1780 |
| BstSCI | CCNGG | 4 cut(s) | 73, 633, 896, 946 |
| BstSFI | CTRYAG | 4 cut(s) | 147, 592, 952, 1377 |
| BstV1I | GCAGC | 3 cut(s) | 329, 407, 485 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1709 |
| BstZ17I | GTATAC | 2 cut(s) | 519, 1446 |
| BsuRI | GGCC | 5 cut(s) | 1288, 1501, 1546, 1591, 1895 |
| BtsCI | GGATG | 4 cut(s) | 215, 630, 713, 1118 |
| BtsIMutI | CAGTG | 1 cut(s) | 957 |
| Cac8I | GCNNGC | 2 cut(s) | 1138, 1318 |
| CciI | TCATGA | 1 cut(s) | 1899 |
| CfoI | GCGC | 2 cut(s) | 1316, 1391 |
| Cfr13I | GGNCC | 1 cut(s) | 47 |
| CseI | GACGC | 1 cut(s) | 1445 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 7, 42, 851, 886 |
| CviAII | CATG | 6 cut(s) | 159, 702, 1059, 1746, 1777, 1900 |
| DpnI | GATC | 3 cut(s) | 90, 788, 1045 |
| DpnII | GATC | 3 cut(s) | 88, 786, 1043 |
| DraIII | CACNNNGTG | 1 cut(s) | 1003 |
| Eam1104I | CTCTTC | 2 cut(s) | 1347, 1680 |
| EarI | CTCTTC | 2 cut(s) | 1347, 1680 |
| Ecl136II | GAGCTC | 1 cut(s) | 766 |
| Eco147I | AGGCCT | 4 cut(s) | 1288, 1501, 1546, 1591 |
| Eco24I | GRGCYC | 2 cut(s) | 175, 768 |
| Eco31I | GGTCTC | 1 cut(s) | 1291 |
| Eco32I | GATATC | 1 cut(s) | 894 |
| Eco47I | GGWCC | 1 cut(s) | 47 |
| Eco53kI | GAGCTC | 1 cut(s) | 766 |
| Eco57I | CTGAAG | 1 cut(s) | 1794 |
| Eco72I | CACGTG | 1 cut(s) | 1623 |
| Eco88I | CYCGRG | 2 cut(s) | 767, 1633 |
| EcoICRI | GAGCTC | 1 cut(s) | 766 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1270 |
| EcoO109I | RGGNCCY | 1 cut(s) | 47 |
| EcoRII | CCWGG | 3 cut(s) | 633, 896, 946 |
| EcoRV | GATATC | 1 cut(s) | 894 |
| EcoT38I | GRGCYC | 2 cut(s) | 175, 768 |
| Esp3I | CGTCTC | 1 cut(s) | 1463 |
| FaeI | CATG | 6 cut(s) | 162, 705, 1062, 1749, 1780, 1903 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 112, 144, 911, 943, 1857, 1889 |
| FatI | CATG | 6 cut(s) | 158, 701, 1058, 1745, 1776, 1899 |
| FauI | CCCGC | 1 cut(s) | 544 |
| FbaI | TGATCA | 1 cut(s) | 786 |
| FblI | GTMKAC | 8 cut(s) | 295, 373, 451, 518, 1420, 1445, 1465, 1600 |
| Fnu4HI | GCNGC | 3 cut(s) | 318, 396, 474 |
| FokI | GGATG | 4 cut(s) | 222, 617, 720, 1125 |
| FriOI | GRGCYC | 2 cut(s) | 175, 768 |
| Fsp4HI | GCNGC | 3 cut(s) | 318, 396, 474 |
| FspBI | CTAG | 4 cut(s) | 678, 924, 981, 1272 |
| GlaI | GCGC | 2 cut(s) | 1315, 1390 |
| GluI | GCNGC | 3 cut(s) | 318, 396, 474 |
| GsaI | CCCAGC | 1 cut(s) | 1052 |
| HaeIII | GGCC | 5 cut(s) | 1288, 1501, 1546, 1591, 1895 |
| HapII | CCGG | 2 cut(s) | 75, 991 |
| HgaI | GACGC | 1 cut(s) | 1445 |
| HhaI | GCGC | 2 cut(s) | 1316, 1391 |
| Hin1I | GRCGYC | 1 cut(s) | 1456 |
| Hin1II | CATG | 6 cut(s) | 162, 705, 1062, 1749, 1780, 1903 |
| Hin6I | GCGC | 2 cut(s) | 1314, 1389 |
| HinP1I | GCGC | 2 cut(s) | 1314, 1389 |
| HindIII | AAGCTT | 1 cut(s) | 1871 |
| HpaII | CCGG | 2 cut(s) | 75, 991 |
| Hpy188I | TCNGA | 8 cut(s) | 138, 170, 548, 1128, 1531, 1657, 1673, 1846 |
| Hpy99I | CGWCG | 1 cut(s) | 450 |
| HpyAV | CCTTC | 6 cut(s) | 37, 64, 180, 200, 1057, 1906 |
| HpyCH4III | ACNGT | 6 cut(s) | 275, 353, 431, 1646, 1719, 1788 |
| HpyCH4IV | ACGT | 1 cut(s) | 1622 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1956 |
| HpySE526I | ACGT | 1 cut(s) | 1622 |
| Hsp92I | GRCGYC | 1 cut(s) | 1456 |
| Hsp92II | CATG | 6 cut(s) | 162, 705, 1062, 1749, 1780, 1903 |
| HspAI | GCGC | 2 cut(s) | 1314, 1389 |
| Kpn2I | TCCGGA | 1 cut(s) | 990 |
| Ksp22I | TGATCA | 1 cut(s) | 786 |
| Kzo9I | GATC | 3 cut(s) | 88, 786, 1043 |
| LmnI | GCTCC | 1 cut(s) | 37 |
| Lsp1109I | GCAGC | 3 cut(s) | 329, 407, 485 |
| LweI | GCATC | 5 cut(s) | 304, 382, 460, 610, 1123 |
| MaeI | CTAG | 4 cut(s) | 678, 924, 981, 1272 |
| MaeII | ACGT | 1 cut(s) | 1622 |
| MaeIII | GTNAC | 6 cut(s) | 269, 347, 728, 1145, 1618, 1880 |
| MalI | GATC | 3 cut(s) | 90, 788, 1045 |
| MbiI | CCGCTC | 3 cut(s) | 309, 387, 465 |
| MboI | GATC | 3 cut(s) | 88, 786, 1043 |
| MfeI | CAATTG | 1 cut(s) | 2008 |
| MhlI | GDGCHC | 2 cut(s) | 175, 768 |
| MlyI | GAGTC | 2 cut(s) | 127, 1625 |
| MroI | TCCGGA | 1 cut(s) | 990 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1410 |
| MseI | TTAA | 3 cut(s) | 555, 1031, 1347 |
| MslI | CAYNNNNRTG | 1 cut(s) | 706 |
| MspA1I | CMGCKG | 4 cut(s) | 320, 398, 476, 1328 |
| MspI | CCGG | 2 cut(s) | 75, 991 |
| MspR9I | CCNGG | 4 cut(s) | 75, 635, 898, 948 |
| MunI | CAATTG | 1 cut(s) | 2008 |
| MvaI | CCWGG | 3 cut(s) | 635, 898, 948 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1956 |
| NciI | CCSGG | 1 cut(s) | 75 |
| NdeII | GATC | 3 cut(s) | 88, 786, 1043 |
| NlaIII | CATG | 6 cut(s) | 162, 705, 1062, 1749, 1780, 1903 |
| NlaIV | GGNNCC | 1 cut(s) | 48 |
| NmuCI | GTSAC | 2 cut(s) | 1145, 1618 |
| NspI | RCATGY | 2 cut(s) | 1749, 1780 |
| PaeR7I | CTCGAG | 1 cut(s) | 767 |
| PagI | TCATGA | 1 cut(s) | 1899 |
| PceI | AGGCCT | 4 cut(s) | 1288, 1501, 1546, 1591 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1410 |
| PflFI | GACNNNGTC | 1 cut(s) | 444 |
| PfoI | TCCNGGA | 2 cut(s) | 633, 896 |
| PkrI | GCNGC | 3 cut(s) | 319, 397, 475 |
| PleI | GAGTC | 2 cut(s) | 127, 1625 |
| PmaCI | CACGTG | 1 cut(s) | 1623 |
| PmlI | CACGTG | 1 cut(s) | 1623 |
| PpsI | GAGTC | 2 cut(s) | 127, 1625 |
| Ppu21I | YACGTR | 1 cut(s) | 1623 |
| PpuMI | RGGWCCY | 1 cut(s) | 47 |
| PshBI | ATTAAT | 1 cut(s) | 555 |
| Psp124BI | GAGCTC | 1 cut(s) | 768 |
| Psp5II | RGGWCCY | 1 cut(s) | 47 |
| Psp6I | CCWGG | 3 cut(s) | 633, 896, 946 |
| PspCI | CACGTG | 1 cut(s) | 1623 |
| PspFI | CCCAGC | 1 cut(s) | 1048 |
| PspGI | CCWGG | 3 cut(s) | 633, 896, 946 |
| PspN4I | GGNNCC | 1 cut(s) | 48 |
| PspPI | GGNCC | 1 cut(s) | 47 |
| PspPPI | RGGWCCY | 1 cut(s) | 47 |
| PstI | CTGCAG | 1 cut(s) | 151 |
| PsyI | GACNNNGTC | 1 cut(s) | 444 |
| PvuII | CAGCTG | 4 cut(s) | 320, 398, 476, 1328 |
| RseI | CAYNNNNRTG | 1 cut(s) | 706 |
| SacI | GAGCTC | 1 cut(s) | 768 |
| SaqAI | TTAA | 3 cut(s) | 555, 1031, 1347 |
| SatI | GCNGC | 3 cut(s) | 318, 396, 474 |
| Sau3AI | GATC | 3 cut(s) | 88, 786, 1043 |
| Sau96I | GGNCC | 1 cut(s) | 47 |
| ScaI | AGTACT | 8 cut(s) | 277, 355, 433, 1279, 1402, 1492, 1537, 1582 |
| SchI | GAGTC | 2 cut(s) | 127, 1625 |
| ScrFI | CCNGG | 4 cut(s) | 75, 635, 898, 948 |
| SduI | GDGCHC | 2 cut(s) | 175, 768 |
| SfaNI | GCATC | 5 cut(s) | 304, 382, 460, 610, 1123 |
| SfcI | CTRYAG | 4 cut(s) | 147, 592, 952, 1377 |
| Sfr274I | CTCGAG | 1 cut(s) | 767 |
| SinI | GGWCC | 1 cut(s) | 47 |
| SlaI | CTCGAG | 1 cut(s) | 767 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 706 |
| SmlI | CTYRAG | 4 cut(s) | 200, 767, 848, 855 |
| SmoI | CTYRAG | 4 cut(s) | 200, 767, 848, 855 |
| SseBI | AGGCCT | 4 cut(s) | 1288, 1501, 1546, 1591 |
| SsiI | CCGC | 4 cut(s) | 309, 387, 465, 537 |
| SspMI | CTAG | 4 cut(s) | 678, 924, 981, 1272 |
| SstI | GAGCTC | 1 cut(s) | 768 |
| StuI | AGGCCT | 4 cut(s) | 1288, 1501, 1546, 1591 |
| StyD4I | CCNGG | 4 cut(s) | 73, 633, 896, 946 |
| TaaI | ACNGT | 6 cut(s) | 275, 353, 431, 1646, 1719, 1788 |
| TaiI | ACGT | 1 cut(s) | 1625 |
| TaqI | TCGA | 2 cut(s) | 768, 1310 |
| Tru1I | TTAA | 3 cut(s) | 555, 1031, 1347 |
| Tru9I | TTAA | 3 cut(s) | 555, 1031, 1347 |
| TscAI | CASTG | 1 cut(s) | 964 |
| TseFI | GTSAC | 2 cut(s) | 1145, 1618 |
| TseI | GCWGC | 3 cut(s) | 317, 395, 473 |
| Tsp45I | GTSAC | 2 cut(s) | 1145, 1618 |
| TspDTI | ATGAA | 6 cut(s) | 123, 147, 619, 1156, 1836, 1888 |
| TspGWI | ACGGA | 2 cut(s) | 747, 1191 |
| TspRI | CASTG | 1 cut(s) | 964 |
| Tth111I | GACNNNGTC | 1 cut(s) | 444 |
| VpaK11BI | GGWCC | 1 cut(s) | 47 |
| VspI | ATTAAT | 1 cut(s) | 555 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1270 |
| XapI | RAATTY | 5 cut(s) | 626, 808, 1651, 1658, 1840 |
| XceI | RCATGY | 2 cut(s) | 1749, 1780 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1056 |
| XhoI | CTCGAG | 1 cut(s) | 767 |
| XmiI | GTMKAC | 8 cut(s) | 295, 373, 451, 518, 1420, 1445, 1465, 1600 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1410 |
| XspI | CTAG | 4 cut(s) | 678, 924, 981, 1272 |
| ZrmI | AGTACT | 8 cut(s) | 277, 355, 433, 1279, 1402, 1492, 1537, 1582 |