Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 4 cut(s) | 664, 689, 709, 844 |
| AccIII | TCCGGA | 1 cut(s) | 237 |
| AclWI | GGATC | 2 cut(s) | 44, 285 |
| AcsI | RAATTY | 2 cut(s) | 902, 1084 |
| AcuI | CTGAAG | 1 cut(s) | 1038 |
| AcvI | CACGTG | 1 cut(s) | 867 |
| AcyI | GRCGYC | 1 cut(s) | 700 |
| AdeI | CACNNNGTG | 1 cut(s) | 250 |
| AfaI | GTAC | 7 cut(s) | 523, 646, 736, 826, 912, 1019, 1106 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 300, 516, 1037, 1135, 1186 |
| AflIII | ACRYGT | 1 cut(s) | 866 |
| AgsI | TTSAA | 6 cut(s) | 181, 286, 317, 349, 967, 1249 |
| AjnI | CCWGG | 2 cut(s) | 143, 193 |
| AluBI | AGCT | 4 cut(s) | 174, 572, 580, 1117 |
| AluI | AGCT | 4 cut(s) | 174, 572, 580, 1117 |
| Alw21I | GWGCWC | 1 cut(s) | 560 |
| Alw26I | GTCTC | 2 cut(s) | 535, 707 |
| AlwI | GGATC | 2 cut(s) | 44, 285 |
| Ama87I | CYCGRG | 1 cut(s) | 877 |
| Aor13HI | TCCGGA | 1 cut(s) | 237 |
| AoxI | GGCC | 5 cut(s) | 530, 743, 788, 833, 1137 |
| ApoI | RAATTY | 2 cut(s) | 902, 1084 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 31 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 654 |
| AspLEI | GCGC | 1 cut(s) | 635 |
| AsuHPI | GGTGA | 3 cut(s) | 145, 401, 968 |
| AvaI | CYCGRG | 1 cut(s) | 877 |
| BauI | CACGAG | 1 cut(s) | 837 |
| BbrPI | CACGTG | 1 cut(s) | 867 |
| BbsI | GAAGAC | 1 cut(s) | 12 |
| Bbv12I | GWGCWC | 1 cut(s) | 560 |
| BccI | CCATC | 2 cut(s) | 347, 351 |
| BceAI | ACGGC | 1 cut(s) | 1152 |
| BciT130I | CCWGG | 2 cut(s) | 145, 195 |
| BcoDI | GTCTC | 2 cut(s) | 535, 707 |
| BfaI | CTAG | 3 cut(s) | 171, 228, 516 |
| BfmI | CTRYAG | 1 cut(s) | 199 |
| BmcAI | AGTACT | 4 cut(s) | 523, 646, 736, 826 |
| Bme1390I | CCNGG | 2 cut(s) | 145, 195 |
| BmeT110I | CYCGRG | 1 cut(s) | 877 |
| BmrFI | CCNGG | 2 cut(s) | 145, 195 |
| BmsI | GCATC | 1 cut(s) | 367 |
| BpiI | GAAGAC | 1 cut(s) | 12 |
| BsaAI | YACGTR | 1 cut(s) | 867 |
| BsaHI | GRCGYC | 1 cut(s) | 700 |
| BsaI | GGTCTC | 1 cut(s) | 535 |
| BsaWI | WCCGGW | 1 cut(s) | 237 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 324, 354 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 300, 516, 1037, 1135, 1186 |
| BseAI | TCCGGA | 1 cut(s) | 237 |
| BseBI | CCWGG | 2 cut(s) | 145, 195 |
| BseGI | GGATG | 1 cut(s) | 362 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 300, 516, 1037, 1135, 1186 |
| BseMII | CTCAG | 6 cut(s) | 198, 362, 672, 765, 928, 1080 |
| BseRI | GAGGAG | 3 cut(s) | 173, 348, 698 |
| BshFI | GGCC | 5 cut(s) | 532, 745, 790, 835, 1139 |
| BsiHKAI | GWGCWC | 1 cut(s) | 560 |
| BsiHKCI | CYCGRG | 1 cut(s) | 877 |
| BsiSI | CCGG | 1 cut(s) | 238 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 300, 516, 1037, 1135, 1186 |
| BsmAI | GTCTC | 2 cut(s) | 535, 707 |
| BsmBI | CGTCTC | 1 cut(s) | 707 |
| BsnI | GGCC | 5 cut(s) | 532, 745, 790, 835, 1139 |
| Bso31I | GGTCTC | 1 cut(s) | 535 |
| BsoBI | CYCGRG | 1 cut(s) | 877 |
| Bsp1286I | GDGCHC | 1 cut(s) | 560 |
| Bsp13I | TCCGGA | 1 cut(s) | 237 |
| Bsp1407I | TGTACA | 1 cut(s) | 1017 |
| Bsp143I | GATC | 2 cut(s) | 36, 290 |
| BspANI | GGCC | 5 cut(s) | 532, 745, 790, 835, 1139 |
| BspCNI | CTCAG | 6 cut(s) | 199, 363, 673, 766, 927, 1081 |
| BspEI | TCCGGA | 1 cut(s) | 237 |
| BspHI | TCATGA | 1 cut(s) | 1143 |
| BspPI | GGATC | 2 cut(s) | 44, 285 |
| BspTNI | GGTCTC | 1 cut(s) | 535 |
| BsrGI | TGTACA | 1 cut(s) | 1017 |
| BssMI | GATC | 2 cut(s) | 36, 290 |
| BssNAI | GTATAC | 1 cut(s) | 690 |
| BssNI | GRCGYC | 1 cut(s) | 700 |
| BssSI | CACGAG | 1 cut(s) | 837 |
| Bst1107I | GTATAC | 1 cut(s) | 690 |
| Bst2BI | CACGAG | 1 cut(s) | 837 |
| Bst2UI | CCWGG | 2 cut(s) | 145, 195 |
| Bst4CI | ACNGT | 2 cut(s) | 963, 1032 |
| Bst6I | CTCTTC | 2 cut(s) | 591, 924 |
| BstACI | GRCGYC | 1 cut(s) | 700 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1200 |
| BstAUI | TGTACA | 1 cut(s) | 1017 |
| BstBAI | YACGTR | 1 cut(s) | 867 |
| BstC8I | GCNNGC | 1 cut(s) | 382 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 514 |
| BstF5I | GGATG | 1 cut(s) | 362 |
| BstHHI | GCGC | 1 cut(s) | 635 |
| BstKTI | GATC | 2 cut(s) | 39, 293 |
| BstMAI | GTCTC | 2 cut(s) | 535, 707 |
| BstMBI | GATC | 2 cut(s) | 36, 290 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1200 |
| BstNI | CCWGG | 2 cut(s) | 145, 195 |
| BstNSI | RCATGY | 2 cut(s) | 993, 1024 |
| BstSCI | CCNGG | 2 cut(s) | 143, 193 |
| BstSFI | CTRYAG | 1 cut(s) | 199 |
| BstV2I | GAAGAC | 1 cut(s) | 12 |
| BstX2I | RGATCY | 1 cut(s) | 36 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 953 |
| BstYI | RGATCY | 1 cut(s) | 36 |
| BstZ17I | GTATAC | 1 cut(s) | 690 |
| BsuRI | GGCC | 5 cut(s) | 532, 745, 790, 835, 1139 |
| BtsCI | GGATG | 1 cut(s) | 362 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 1 cut(s) | 382 |
| CciI | TCATGA | 1 cut(s) | 1143 |
| CfoI | GCGC | 1 cut(s) | 635 |
| CseI | GACGC | 1 cut(s) | 689 |
| Csp6I | GTAC | 7 cut(s) | 522, 645, 735, 825, 911, 1018, 1105 |
| CviAII | CATG | 4 cut(s) | 306, 990, 1021, 1144 |
| CviQI | GTAC | 7 cut(s) | 522, 645, 735, 825, 911, 1018, 1105 |
| DpnI | GATC | 2 cut(s) | 38, 292 |
| DpnII | GATC | 2 cut(s) | 36, 290 |
| DraIII | CACNNNGTG | 1 cut(s) | 250 |
| Eam1104I | CTCTTC | 2 cut(s) | 591, 924 |
| EarI | CTCTTC | 2 cut(s) | 591, 924 |
| Eco147I | AGGCCT | 4 cut(s) | 532, 745, 790, 835 |
| Eco31I | GGTCTC | 1 cut(s) | 535 |
| Eco32I | GATATC | 1 cut(s) | 141 |
| Eco57I | CTGAAG | 1 cut(s) | 1038 |
| Eco72I | CACGTG | 1 cut(s) | 867 |
| Eco88I | CYCGRG | 1 cut(s) | 877 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 514 |
| EcoRII | CCWGG | 2 cut(s) | 143, 193 |
| EcoRV | GATATC | 1 cut(s) | 141 |
| Esp3I | CGTCTC | 1 cut(s) | 707 |
| FaeI | CATG | 4 cut(s) | 309, 993, 1024, 1147 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 158, 190, 1101, 1133 |
| FatI | CATG | 4 cut(s) | 305, 989, 1020, 1143 |
| FblI | GTMKAC | 4 cut(s) | 664, 689, 709, 844 |
| FokI | GGATG | 1 cut(s) | 369 |
| FspBI | CTAG | 3 cut(s) | 171, 228, 516 |
| GlaI | GCGC | 1 cut(s) | 634 |
| HaeIII | GGCC | 5 cut(s) | 532, 745, 790, 835, 1139 |
| HapII | CCGG | 1 cut(s) | 238 |
| HgaI | GACGC | 1 cut(s) | 689 |
| HhaI | GCGC | 1 cut(s) | 635 |
| Hin1I | GRCGYC | 1 cut(s) | 700 |
| Hin1II | CATG | 4 cut(s) | 309, 993, 1024, 1147 |
| Hin6I | GCGC | 1 cut(s) | 633 |
| HinP1I | GCGC | 1 cut(s) | 633 |
| HindIII | AAGCTT | 1 cut(s) | 1115 |
| HinfI | GANTC | 4 cut(s) | 219, 231, 875, 950 |
| HpaII | CCGG | 1 cut(s) | 238 |
| HphI | GGTGA | 3 cut(s) | 145, 401, 968 |
| Hpy166II | GTNNAC | 9 cut(s) | 253, 448, 665, 690, 710, 845, 959, 1018, 1240 |
| Hpy188I | TCNGA | 5 cut(s) | 372, 775, 901, 917, 1090 |
| Hpy188III | TCNNGA | 4 cut(s) | 238, 330, 1056, 1144 |
| Hpy8I | GTNNAC | 9 cut(s) | 253, 448, 665, 690, 710, 845, 959, 1018, 1240 |
| HpyAV | CCTTC | 2 cut(s) | 304, 1150 |
| HpyCH4III | ACNGT | 2 cut(s) | 963, 1032 |
| HpyCH4IV | ACGT | 1 cut(s) | 866 |
| HpyCH4V | TGCA | 4 cut(s) | 612, 979, 993, 1169 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1200 |
| HpySE526I | ACGT | 1 cut(s) | 866 |
| Hsp92I | GRCGYC | 1 cut(s) | 700 |
| Hsp92II | CATG | 4 cut(s) | 309, 993, 1024, 1147 |
| HspAI | GCGC | 1 cut(s) | 633 |
| Kpn2I | TCCGGA | 1 cut(s) | 237 |
| Kzo9I | GATC | 2 cut(s) | 36, 290 |
| LweI | GCATC | 1 cut(s) | 367 |
| MaeI | CTAG | 3 cut(s) | 171, 228, 516 |
| MaeII | ACGT | 1 cut(s) | 866 |
| MaeIII | GTNAC | 4 cut(s) | 389, 796, 862, 1124 |
| MalI | GATC | 2 cut(s) | 38, 292 |
| MboI | GATC | 2 cut(s) | 36, 290 |
| MboII | GAAGA | 9 cut(s) | 17, 31, 148, 169, 608, 941, 947, 950, 1044 |
| MfeI | CAATTG | 1 cut(s) | 1252 |
| MflI | RGATCY | 1 cut(s) | 36 |
| MhlI | GDGCHC | 1 cut(s) | 560 |
| MluCI | AATT | 9 cut(s) | 99, 106, 565, 902, 974, 1084, 1205, 1230, 1252 |
| MlyI | GAGTC | 1 cut(s) | 869 |
| MmeI | TCCRAC | 1 cut(s) | 14 |
| MroI | TCCGGA | 1 cut(s) | 237 |
| MroXI | GAANNNNTTC | 1 cut(s) | 654 |
| MseI | TTAA | 2 cut(s) | 278, 591 |
| MspA1I | CMGCKG | 1 cut(s) | 572 |
| MspI | CCGG | 1 cut(s) | 238 |
| MspR9I | CCNGG | 2 cut(s) | 145, 195 |
| MunI | CAATTG | 1 cut(s) | 1252 |
| MvaI | CCWGG | 2 cut(s) | 145, 195 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1200 |
| NdeII | GATC | 2 cut(s) | 36, 290 |
| NlaIII | CATG | 4 cut(s) | 309, 993, 1024, 1147 |
| NmuCI | GTSAC | 2 cut(s) | 389, 862 |
| NspI | RCATGY | 2 cut(s) | 993, 1024 |
| PagI | TCATGA | 1 cut(s) | 1143 |
| PceI | AGGCCT | 4 cut(s) | 532, 745, 790, 835 |
| PdmI | GAANNNNTTC | 1 cut(s) | 654 |
| PfeI | GAWTC | 3 cut(s) | 219, 231, 950 |
| PfoI | TCCNGGA | 1 cut(s) | 143 |
| PleI | GAGTC | 1 cut(s) | 869 |
| PmaCI | CACGTG | 1 cut(s) | 867 |
| PmlI | CACGTG | 1 cut(s) | 867 |
| PpsI | GAGTC | 1 cut(s) | 869 |
| Ppu21I | YACGTR | 1 cut(s) | 867 |
| Psp6I | CCWGG | 2 cut(s) | 143, 193 |
| PspCI | CACGTG | 1 cut(s) | 867 |
| PspGI | CCWGG | 2 cut(s) | 143, 193 |
| PsuI | RGATCY | 1 cut(s) | 36 |
| PvuII | CAGCTG | 1 cut(s) | 572 |
| RsaI | GTAC | 7 cut(s) | 523, 646, 736, 826, 912, 1019, 1106 |
| RsaNI | GTAC | 7 cut(s) | 522, 645, 735, 825, 911, 1018, 1105 |
| SaqAI | TTAA | 2 cut(s) | 278, 591 |
| Sau3AI | GATC | 2 cut(s) | 36, 290 |
| ScaI | AGTACT | 4 cut(s) | 523, 646, 736, 826 |
| SchI | GAGTC | 1 cut(s) | 869 |
| ScrFI | CCNGG | 2 cut(s) | 145, 195 |
| SduI | GDGCHC | 1 cut(s) | 560 |
| SfaNI | GCATC | 1 cut(s) | 367 |
| SfcI | CTRYAG | 1 cut(s) | 199 |
| Sse9I | AATT | 9 cut(s) | 99, 106, 565, 902, 974, 1084, 1205, 1230, 1252 |
| SseBI | AGGCCT | 4 cut(s) | 532, 745, 790, 835 |
| SspMI | CTAG | 3 cut(s) | 171, 228, 516 |
| StuI | AGGCCT | 4 cut(s) | 532, 745, 790, 835 |
| StyD4I | CCNGG | 2 cut(s) | 143, 193 |
| TaaI | ACNGT | 2 cut(s) | 963, 1032 |
| TaiI | ACGT | 1 cut(s) | 869 |
| TaqI | TCGA | 1 cut(s) | 554 |
| TasI | AATT | 9 cut(s) | 99, 106, 565, 902, 974, 1084, 1205, 1230, 1252 |
| TatI | WGTACW | 6 cut(s) | 521, 644, 734, 824, 910, 1017 |
| TfiI | GAWTC | 3 cut(s) | 219, 231, 950 |
| Tru1I | TTAA | 2 cut(s) | 278, 591 |
| Tru9I | TTAA | 2 cut(s) | 278, 591 |
| TscAI | CASTG | 1 cut(s) | 211 |
| TseFI | GTSAC | 2 cut(s) | 389, 862 |
| Tsp45I | GTSAC | 2 cut(s) | 389, 862 |
| TspDTI | ATGAA | 3 cut(s) | 400, 1080, 1132 |
| TspGWI | ACGGA | 1 cut(s) | 435 |
| TspRI | CASTG | 1 cut(s) | 211 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 514 |
| XapI | RAATTY | 2 cut(s) | 902, 1084 |
| XceI | RCATGY | 2 cut(s) | 993, 1024 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 303 |
| XmiI | GTMKAC | 4 cut(s) | 664, 689, 709, 844 |
| XmnI | GAANNNNTTC | 1 cut(s) | 654 |
| XspI | CTAG | 3 cut(s) | 171, 228, 516 |
| ZrmI | AGTACT | 4 cut(s) | 523, 646, 736, 826 |