B3 domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 646 |
| AccB1I | GGYRCC | 1 cut(s) | 1967 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1723 |
| AccI | GTMKAC | 2 cut(s) | 1599, 2166 |
| AciI | CCGC | 3 cut(s) | 147, 467, 1033 |
| AclWI | GGATC | 6 cut(s) | 447, 697, 1267, 1419, 1734, 1806 |
| AcoI | YGGCCR | 1 cut(s) | 1699 |
| AcsI | RAATTY | 7 cut(s) | 335, 499, 748, 777, 1140, 1511, 2055 |
| AfaI | GTAC | 3 cut(s) | 1784, 1880, 2175 |
| AfeI | AGCGCT | 1 cut(s) | 1722 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 221, 222, 1255, 1723 |
| AhlI | ACTAGT | 1 cut(s) | 506 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1695, 1727 |
| AluBI | AGCT | 9 cut(s) | 110, 378, 494, 859, 1390, 1559, 1565, 1711, 1926 |
| AluI | AGCT | 9 cut(s) | 110, 378, 494, 859, 1390, 1559, 1565, 1711, 1926 |
| Alw21I | GWGCWC | 3 cut(s) | 840, 1532, 2027 |
| Alw26I | GTCTC | 2 cut(s) | 1244, 1879 |
| Alw44I | GTGCAC | 1 cut(s) | 1528 |
| AlwI | GGATC | 6 cut(s) | 447, 697, 1267, 1419, 1734, 1806 |
| Aor51HI | AGCGCT | 1 cut(s) | 1722 |
| AoxI | GGCC | 1 cut(s) | 1699 |
| ApaLI | GTGCAC | 1 cut(s) | 1528 |
| ApeKI | GCWGC | 4 cut(s) | 1471, 1559, 1562, 1708 |
| ApoI | RAATTY | 7 cut(s) | 335, 499, 748, 777, 1140, 1511, 2055 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 642, 674 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 63 |
| AspLEI | GCGC | 1 cut(s) | 1723 |
| AspS9I | GGNCC | 3 cut(s) | 539, 1895, 2117 |
| AsuC2I | CCSGG | 1 cut(s) | 1832 |
| AsuHPI | GGTGA | 4 cut(s) | 190, 781, 989, 1286 |
| AsuII | TTCGAA | 1 cut(s) | 1181 |
| AvaII | GGWCC | 3 cut(s) | 539, 1895, 2117 |
| BaeGI | GKGCMC | 2 cut(s) | 1532, 1972 |
| BalI | TGGCCA | 1 cut(s) | 1701 |
| BanI | GGYRCC | 1 cut(s) | 1967 |
| BanII | GRGCYC | 1 cut(s) | 228 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 610, 642 |
| BauI | CACGAG | 1 cut(s) | 1075 |
| BbsI | GAAGAC | 2 cut(s) | 114, 652 |
| Bbv12I | GWGCWC | 3 cut(s) | 840, 1532, 2027 |
| BbvI | GCAGC | 4 cut(s) | 1458, 1546, 1574, 1720 |
| BccI | CCATC | 8 cut(s) | 182, 412, 424, 427, 556, 855, 1219, 1912 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 922, 956, 1161, 1195, 1222, 1256 |
| BcnI | CCSGG | 1 cut(s) | 1832 |
| BcoDI | GTCTC | 2 cut(s) | 1244, 1879 |
| BcuI | ACTAGT | 1 cut(s) | 506 |
| BfaI | CTAG | 7 cut(s) | 323, 368, 507, 635, 1118, 1263, 1611 |
| BfmI | CTRYAG | 2 cut(s) | 653, 1560 |
| BfoI | RGCGCY | 1 cut(s) | 1724 |
| BfuAI | ACCTGC | 1 cut(s) | 646 |
| BisI | GCNGC | 4 cut(s) | 1472, 1560, 1563, 1709 |
| BlsI | GCNGC | 4 cut(s) | 1473, 1561, 1564, 1710 |
| Bme1390I | CCNGG | 1 cut(s) | 1832 |
| Bme18I | GGWCC | 3 cut(s) | 539, 1895, 2117 |
| BmgT120I | GGNCC | 3 cut(s) | 539, 1895, 2117 |
| BmiI | GGNNCC | 3 cut(s) | 1969, 2119, 2186 |
| BmrFI | CCNGG | 1 cut(s) | 1832 |
| BmrI | ACTGGG | 2 cut(s) | 1496, 1640 |
| BmsI | GCATC | 6 cut(s) | 1077, 1609, 1844, 1999, 2023, 2059 |
| BmuI | ACTGGG | 2 cut(s) | 1496, 1640 |
| BpiI | GAAGAC | 2 cut(s) | 114, 652 |
| BpmI | CTGGAG | 1 cut(s) | 1527 |
| Bpu14I | TTCGAA | 1 cut(s) | 1181 |
| BpuEI | CTTGAG | 1 cut(s) | 1551 |
| BpuMI | CCSGG | 1 cut(s) | 1832 |
| BsaJI | CCNNGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1730, 1760 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 221, 222, 1255, 1723 |
| Bse1I | ACTGG | 4 cut(s) | 420, 1491, 1646, 1800 |
| Bse3DI | GCAATG | 2 cut(s) | 908, 1218 |
| BseDI | CCNNGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| BseGI | GGATG | 2 cut(s) | 416, 548 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 221, 222, 1255, 1723 |
| BseMI | GCAATG | 2 cut(s) | 908, 1218 |
| BseMII | CTCAG | 3 cut(s) | 143, 1052, 1406 |
| BseNI | ACTGG | 4 cut(s) | 420, 1491, 1646, 1800 |
| BseRI | GAGGAG | 2 cut(s) | 117, 2236 |
| BseSI | GKGCMC | 2 cut(s) | 1532, 1972 |
| BseXI | GCAGC | 4 cut(s) | 1458, 1546, 1574, 1720 |
| BseYI | CCCAGC | 1 cut(s) | 1453 |
| BshFI | GGCC | 1 cut(s) | 1701 |
| BshNI | GGYRCC | 1 cut(s) | 1967 |
| BsiHKAI | GWGCWC | 3 cut(s) | 840, 1532, 2027 |
| BsiSI | CCGG | 2 cut(s) | 1749, 1832 |
| BslFI | GGGAC | 3 cut(s) | 1471, 1628, 2103 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 221, 222, 1255, 1723 |
| BsmAI | GTCTC | 2 cut(s) | 1244, 1879 |
| BsmBI | CGTCTC | 1 cut(s) | 1244 |
| BsmFI | GGGAC | 3 cut(s) | 1471, 1628, 2103 |
| BsnI | GGCC | 1 cut(s) | 1701 |
| Bsp119I | TTCGAA | 1 cut(s) | 1181 |
| Bsp1286I | GDGCHC | 5 cut(s) | 228, 840, 1532, 1972, 2027 |
| Bsp1407I | TGTACA | 1 cut(s) | 2173 |
| Bsp143I | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| Bsp19I | CCATGG | 1 cut(s) | 2060 |
| BspACI | CCGC | 3 cut(s) | 147, 467, 1033 |
| BspANI | GGCC | 1 cut(s) | 1701 |
| BspCNI | CTCAG | 3 cut(s) | 142, 1053, 1407 |
| BspLI | GGNNCC | 3 cut(s) | 1969, 2119, 2186 |
| BspMAI | CTGCAG | 2 cut(s) | 657, 1564 |
| BspMI | ACCTGC | 1 cut(s) | 646 |
| BspPI | GGATC | 6 cut(s) | 447, 697, 1267, 1419, 1734, 1806 |
| BspT104I | TTCGAA | 1 cut(s) | 1181 |
| BspT107I | GGYRCC | 1 cut(s) | 1967 |
| BsrDI | GCAATG | 2 cut(s) | 908, 1218 |
| BsrGI | TGTACA | 1 cut(s) | 2173 |
| BsrI | ACTGG | 4 cut(s) | 420, 1491, 1646, 1800 |
| BssECI | CCNNGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| BssMI | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| BssSI | CACGAG | 1 cut(s) | 1075 |
| BssT1I | CCWWGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| Bst2BI | CACGAG | 1 cut(s) | 1075 |
| Bst4CI | ACNGT | 1 cut(s) | 1292 |
| Bst6I | CTCTTC | 3 cut(s) | 46, 723, 1467 |
| BstAUI | TGTACA | 1 cut(s) | 2173 |
| BstBI | TTCGAA | 1 cut(s) | 1181 |
| BstC8I | GCNNGC | 3 cut(s) | 73, 1031, 2215 |
| BstDSI | CCRYGG | 1 cut(s) | 2060 |
| BstEII | GGTNACC | 1 cut(s) | 196 |
| BstF5I | GGATG | 2 cut(s) | 416, 548 |
| BstH2I | RGCGCY | 1 cut(s) | 1724 |
| BstHHI | GCGC | 1 cut(s) | 1723 |
| BstKTI | GATC | 8 cut(s) | 328, 358, 442, 692, 1262, 1414, 1729, 1801 |
| BstMAI | GTCTC | 2 cut(s) | 1244, 1879 |
| BstMBI | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 81, 1387 |
| BstPI | GGTNACC | 1 cut(s) | 196 |
| BstSCI | CCNGG | 1 cut(s) | 1830 |
| BstSFI | CTRYAG | 2 cut(s) | 653, 1560 |
| BstSLI | GKGCMC | 2 cut(s) | 1532, 1972 |
| BstV1I | GCAGC | 4 cut(s) | 1458, 1546, 1574, 1720 |
| BstV2I | GAAGAC | 2 cut(s) | 114, 652 |
| BstX2I | RGATCY | 5 cut(s) | 439, 1259, 1411, 1726, 1798 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 830, 1505, 1820 |
| BstYI | RGATCY | 5 cut(s) | 439, 1259, 1411, 1726, 1798 |
| BsuRI | GGCC | 1 cut(s) | 1701 |
| BtgI | CCRYGG | 1 cut(s) | 2060 |
| BtsCI | GGATG | 2 cut(s) | 416, 548 |
| BveI | ACCTGC | 1 cut(s) | 646 |
| Cac8I | GCNNGC | 3 cut(s) | 73, 1031, 2215 |
| CfoI | GCGC | 1 cut(s) | 1723 |
| Cfr13I | GGNCC | 3 cut(s) | 539, 1895, 2117 |
| Csp6I | GTAC | 3 cut(s) | 1783, 1879, 2174 |
| CviAII | CATG | 9 cut(s) | 68, 461, 988, 1377, 1786, 1807, 2061, 2189, 2218 |
| CviQI | GTAC | 3 cut(s) | 1783, 1879, 2174 |
| DpnI | GATC | 8 cut(s) | 327, 357, 441, 691, 1261, 1413, 1728, 1800 |
| DpnII | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| EaeI | YGGCCR | 1 cut(s) | 1699 |
| Eam1104I | CTCTTC | 3 cut(s) | 46, 723, 1467 |
| EarI | CTCTTC | 3 cut(s) | 46, 723, 1467 |
| Eco130I | CCWWGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| Eco24I | GRGCYC | 1 cut(s) | 228 |
| Eco32I | GATATC | 2 cut(s) | 982, 1770 |
| Eco47I | GGWCC | 3 cut(s) | 539, 1895, 2117 |
| Eco47III | AGCGCT | 1 cut(s) | 1722 |
| Eco91I | GGTNACC | 1 cut(s) | 196 |
| EcoO109I | RGGNCCY | 1 cut(s) | 539 |
| EcoO65I | GGTNACC | 1 cut(s) | 196 |
| EcoRI | GAATTC | 1 cut(s) | 335 |
| EcoRV | GATATC | 2 cut(s) | 982, 1770 |
| EcoT14I | CCWWGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| EcoT22I | ATGCAT | 1 cut(s) | 2152 |
| EcoT38I | GRGCYC | 1 cut(s) | 228 |
| ErhI | CCWWGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| Esp3I | CGTCTC | 1 cut(s) | 1244 |
| FaeI | CATG | 9 cut(s) | 71, 464, 991, 1380, 1789, 1810, 2064, 2192, 2221 |
| FaqI | GGGAC | 3 cut(s) | 1471, 1628, 2103 |
| FatI | CATG | 9 cut(s) | 67, 460, 987, 1376, 1785, 1806, 2060, 2188, 2217 |
| FauNDI | CATATG | 1 cut(s) | 954 |
| FblI | GTMKAC | 2 cut(s) | 1599, 2166 |
| Fnu4HI | GCNGC | 4 cut(s) | 1472, 1560, 1563, 1709 |
| FokI | GGATG | 2 cut(s) | 403, 535 |
| FriOI | GRGCYC | 1 cut(s) | 228 |
| Fsp4HI | GCNGC | 4 cut(s) | 1472, 1560, 1563, 1709 |
| FspBI | CTAG | 7 cut(s) | 323, 368, 507, 635, 1118, 1263, 1611 |
| GlaI | GCGC | 1 cut(s) | 1722 |
| GluI | GCNGC | 4 cut(s) | 1472, 1560, 1563, 1709 |
| GsaI | CCCAGC | 1 cut(s) | 1457 |
| GsuI | CTGGAG | 1 cut(s) | 1527 |
| HaeII | RGCGCY | 1 cut(s) | 1724 |
| HaeIII | GGCC | 1 cut(s) | 1701 |
| HapII | CCGG | 2 cut(s) | 1749, 1832 |
| HhaI | GCGC | 1 cut(s) | 1723 |
| Hin1II | CATG | 9 cut(s) | 71, 464, 991, 1380, 1789, 1810, 2064, 2192, 2221 |
| Hin6I | GCGC | 1 cut(s) | 1721 |
| HinP1I | GCGC | 1 cut(s) | 1721 |
| HindIII | AAGCTT | 2 cut(s) | 492, 1924 |
| HinfI | GANTC | 6 cut(s) | 292, 1105, 1428, 1459, 1951, 2109 |
| HpaII | CCGG | 2 cut(s) | 1749, 1832 |
| HphI | GGTGA | 4 cut(s) | 190, 781, 989, 1286 |
| Hpy166II | GTNNAC | 5 cut(s) | 458, 1022, 1530, 1600, 2167 |
| Hpy188I | TCNGA | 5 cut(s) | 432, 924, 1416, 1956, 1992 |
| Hpy8I | GTNNAC | 5 cut(s) | 458, 1022, 1530, 1600, 2167 |
| HpyAV | CCTTC | 6 cut(s) | 161, 395, 576, 610, 896, 1174 |
| HpyCH4III | ACNGT | 1 cut(s) | 1292 |
| HpyCH4IV | ACGT | 1 cut(s) | 1237 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 81, 1387 |
| HpySE526I | ACGT | 1 cut(s) | 1237 |
| Hsp92II | CATG | 9 cut(s) | 71, 464, 991, 1380, 1789, 1810, 2064, 2192, 2221 |
| HspAI | GCGC | 1 cut(s) | 1721 |
| Kzo9I | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| LmnI | GCTCC | 3 cut(s) | 843, 1789, 2047 |
| Lsp1109I | GCAGC | 4 cut(s) | 1458, 1546, 1574, 1720 |
| LweI | GCATC | 6 cut(s) | 1077, 1609, 1844, 1999, 2023, 2059 |
| MaeI | CTAG | 7 cut(s) | 323, 368, 507, 635, 1118, 1263, 1611 |
| MaeII | ACGT | 1 cut(s) | 1237 |
| MaeIII | GTNAC | 8 cut(s) | 196, 210, 521, 579, 671, 1201, 1398, 1661 |
| MalI | GATC | 8 cut(s) | 327, 357, 441, 691, 1261, 1413, 1728, 1800 |
| MboI | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| MfeI | CAATTG | 4 cut(s) | 160, 824, 1666, 1703 |
| MflI | RGATCY | 5 cut(s) | 439, 1259, 1411, 1726, 1798 |
| MhlI | GDGCHC | 5 cut(s) | 228, 840, 1532, 1972, 2027 |
| MlsI | TGGCCA | 1 cut(s) | 1701 |
| MluNI | TGGCCA | 1 cut(s) | 1701 |
| MlyI | GAGTC | 2 cut(s) | 1453, 2118 |
| MmeI | TCCRAC | 2 cut(s) | 511, 807 |
| Mox20I | TGGCCA | 1 cut(s) | 1701 |
| Mph1103I | ATGCAT | 1 cut(s) | 2152 |
| MroXI | GAANNNNTTC | 1 cut(s) | 63 |
| MscI | TGGCCA | 1 cut(s) | 1701 |
| MseI | TTAA | 5 cut(s) | 711, 993, 1311, 1851, 1869 |
| Msp20I | TGGCCA | 1 cut(s) | 1701 |
| MspA1I | CMGCKG | 1 cut(s) | 149 |
| MspI | CCGG | 2 cut(s) | 1749, 1832 |
| MspR9I | CCNGG | 1 cut(s) | 1832 |
| MunI | CAATTG | 4 cut(s) | 160, 824, 1666, 1703 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 81, 1387 |
| NciI | CCSGG | 1 cut(s) | 1832 |
| NcoI | CCATGG | 1 cut(s) | 2060 |
| NdeI | CATATG | 1 cut(s) | 954 |
| NdeII | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| NlaIII | CATG | 9 cut(s) | 71, 464, 991, 1380, 1789, 1810, 2064, 2192, 2221 |
| NlaIV | GGNNCC | 3 cut(s) | 1969, 2119, 2186 |
| NmuCI | GTSAC | 3 cut(s) | 196, 1201, 1661 |
| NsiI | ATGCAT | 1 cut(s) | 2152 |
| NspV | TTCGAA | 1 cut(s) | 1181 |
| PdmI | GAANNNNTTC | 1 cut(s) | 63 |
| PfeI | GAWTC | 4 cut(s) | 292, 1105, 1428, 1951 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1723 |
| PkrI | GCNGC | 4 cut(s) | 1473, 1561, 1564, 1710 |
| PleI | GAGTC | 2 cut(s) | 1453, 2117 |
| PpsI | GAGTC | 2 cut(s) | 1453, 2117 |
| PpuMI | RGGWCCY | 1 cut(s) | 539 |
| Psp5II | RGGWCCY | 1 cut(s) | 539 |
| PspEI | GGTNACC | 1 cut(s) | 196 |
| PspFI | CCCAGC | 1 cut(s) | 1453 |
| PspN4I | GGNNCC | 3 cut(s) | 1969, 2119, 2186 |
| PspPI | GGNCC | 3 cut(s) | 539, 1895, 2117 |
| PspPPI | RGGWCCY | 1 cut(s) | 539 |
| PstI | CTGCAG | 2 cut(s) | 657, 1564 |
| PsuI | RGATCY | 5 cut(s) | 439, 1259, 1411, 1726, 1798 |
| RsaI | GTAC | 3 cut(s) | 1784, 1880, 2175 |
| RsaNI | GTAC | 3 cut(s) | 1783, 1879, 2174 |
| SaqAI | TTAA | 5 cut(s) | 711, 993, 1311, 1851, 1869 |
| SatI | GCNGC | 4 cut(s) | 1472, 1560, 1563, 1709 |
| Sau3AI | GATC | 8 cut(s) | 325, 355, 439, 689, 1259, 1411, 1726, 1798 |
| Sau96I | GGNCC | 3 cut(s) | 539, 1895, 2117 |
| SchI | GAGTC | 2 cut(s) | 1453, 2118 |
| ScrFI | CCNGG | 1 cut(s) | 1832 |
| SduI | GDGCHC | 5 cut(s) | 228, 840, 1532, 1972, 2027 |
| SfaNI | GCATC | 6 cut(s) | 1077, 1609, 1844, 1999, 2023, 2059 |
| SfcI | CTRYAG | 2 cut(s) | 653, 1560 |
| SfuI | TTCGAA | 1 cut(s) | 1181 |
| SinI | GGWCC | 3 cut(s) | 539, 1895, 2117 |
| SmlI | CTYRAG | 1 cut(s) | 1566 |
| SmoI | CTYRAG | 1 cut(s) | 1566 |
| SpeI | ACTAGT | 1 cut(s) | 506 |
| SsiI | CCGC | 3 cut(s) | 147, 467, 1033 |
| SspMI | CTAG | 7 cut(s) | 323, 368, 507, 635, 1118, 1263, 1611 |
| StyD4I | CCNGG | 1 cut(s) | 1830 |
| StyI | CCWWGG | 5 cut(s) | 1254, 1466, 2043, 2060, 2121 |
| TaaI | ACNGT | 1 cut(s) | 1292 |
| TaiI | ACGT | 1 cut(s) | 1240 |
| TaqI | TCGA | 5 cut(s) | 184, 360, 1181, 1330, 1385 |
| TatI | WGTACW | 2 cut(s) | 1782, 2173 |
| TfiI | GAWTC | 4 cut(s) | 292, 1105, 1428, 1951 |
| Tru1I | TTAA | 5 cut(s) | 711, 993, 1311, 1851, 1869 |
| Tru9I | TTAA | 5 cut(s) | 711, 993, 1311, 1851, 1869 |
| TseFI | GTSAC | 3 cut(s) | 196, 1201, 1661 |
| TseI | GCWGC | 4 cut(s) | 1471, 1559, 1562, 1708 |
| Tsp45I | GTSAC | 3 cut(s) | 196, 1201, 1661 |
| TspDTI | ATGAA | 9 cut(s) | 56, 462, 741, 897, 941, 1137, 1229, 1823, 2080 |
| TspGWI | ACGGA | 1 cut(s) | 653 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1723 |
| VneI | GTGCAC | 1 cut(s) | 1528 |
| VpaK11BI | GGWCC | 3 cut(s) | 539, 1895, 2117 |
| XapI | RAATTY | 7 cut(s) | 335, 499, 748, 777, 1140, 1511, 2055 |
| XbaI | TCTAGA | 2 cut(s) | 322, 1117 |
| XmiI | GTMKAC | 2 cut(s) | 1599, 2166 |
| XmnI | GAANNNNTTC | 1 cut(s) | 63 |
| XspI | CTAG | 7 cut(s) | 323, 368, 507, 635, 1118, 1263, 1611 |
| Zsp2I | ATGCAT | 1 cut(s) | 2152 |