B3 domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF538 | PF04398 | 49 - 155 | 3.7e-30 | Protein of unknown function, DUF538 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 147 |
| AccII | CGCG | 1 cut(s) | 192 |
| AclWI | GGATC | 1 cut(s) | 198 |
| AcyI | GRCGYC | 1 cut(s) | 144 |
| AfaI | GTAC | 2 cut(s) | 167, 284 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 167, 178, 381 |
| AgsI | TTSAA | 1 cut(s) | 347 |
| AluBI | AGCT | 3 cut(s) | 310, 358, 506 |
| AluI | AGCT | 3 cut(s) | 310, 358, 506 |
| Alw26I | GTCTC | 1 cut(s) | 78 |
| AlwI | GGATC | 1 cut(s) | 198 |
| AoxI | GGCC | 2 cut(s) | 3, 169 |
| AsuHPI | GGTGA | 1 cut(s) | 7 |
| BanII | GRGCYC | 1 cut(s) | 433 |
| BccI | CCATC | 3 cut(s) | 20, 124, 218 |
| BceAI | ACGGC | 1 cut(s) | 184 |
| BclI | TGATCA | 1 cut(s) | 271 |
| BcoDI | GTCTC | 1 cut(s) | 78 |
| BfaI | CTAG | 1 cut(s) | 507 |
| BglII | AGATCT | 1 cut(s) | 237 |
| BmiI | GGNNCC | 1 cut(s) | 229 |
| BmsI | GCATC | 1 cut(s) | 375 |
| BsaHI | GRCGYC | 1 cut(s) | 144 |
| BsaI | GGTCTC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 2 cut(s) | 176, 496 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 200, 230, 495, 525 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 167, 178, 381 |
| BseDI | CCNNGG | 2 cut(s) | 176, 496 |
| BseGI | GGATG | 3 cut(s) | 8, 116, 390 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 167, 178, 381 |
| BseMII | CTCAG | 3 cut(s) | 69, 94, 302 |
| BseRI | GAGGAG | 3 cut(s) | 146, 513, 516 |
| Bsh1236I | CGCG | 1 cut(s) | 192 |
| BshFI | GGCC | 2 cut(s) | 5, 171 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 167, 178, 381 |
| BsmAI | GTCTC | 1 cut(s) | 78 |
| BsnI | GGCC | 2 cut(s) | 5, 171 |
| Bso31I | GGTCTC | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 433 |
| Bsp143I | GATC | 3 cut(s) | 203, 237, 271 |
| BspANI | GGCC | 2 cut(s) | 5, 171 |
| BspCNI | CTCAG | 3 cut(s) | 68, 93, 303 |
| BspFNI | CGCG | 1 cut(s) | 192 |
| BspLI | GGNNCC | 1 cut(s) | 229 |
| BspPI | GGATC | 1 cut(s) | 198 |
| BspTNI | GGTCTC | 1 cut(s) | 78 |
| BssECI | CCNNGG | 2 cut(s) | 176, 496 |
| BssMI | GATC | 3 cut(s) | 203, 237, 271 |
| BssNI | GRCGYC | 1 cut(s) | 144 |
| BssT1I | CCWWGG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 3 cut(s) | 113, 376, 459 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 56 |
| BstACI | GRCGYC | 1 cut(s) | 144 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 492 |
| BstC8I | GCNNGC | 2 cut(s) | 450, 493 |
| BstDEI | CTNAG | 3 cut(s) | 55, 80, 311 |
| BstEII | GGTNACC | 1 cut(s) | 370 |
| BstF5I | GGATG | 3 cut(s) | 8, 116, 390 |
| BstFNI | CGCG | 1 cut(s) | 192 |
| BstKTI | GATC | 3 cut(s) | 206, 240, 274 |
| BstMAI | GTCTC | 1 cut(s) | 78 |
| BstMBI | GATC | 3 cut(s) | 203, 237, 271 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 492 |
| BstPI | GGTNACC | 1 cut(s) | 370 |
| BstUI | CGCG | 1 cut(s) | 192 |
| BstX2I | RGATCY | 2 cut(s) | 203, 237 |
| BstYI | RGATCY | 2 cut(s) | 203, 237 |
| BsuRI | GGCC | 2 cut(s) | 5, 171 |
| BtsCI | GGATG | 3 cut(s) | 8, 116, 390 |
| Cac8I | GCNNGC | 2 cut(s) | 450, 493 |
| Csp6I | GTAC | 2 cut(s) | 166, 283 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 9 cut(s) | 5, 171, 310, 321, 350, 358, 431, 491, 506 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 171, 310, 321, 350, 358, 431, 491, 506 |
| CviQI | GTAC | 2 cut(s) | 166, 283 |
| DdeI | CTNAG | 3 cut(s) | 55, 80, 311 |
| DpnI | GATC | 3 cut(s) | 205, 239, 273 |
| DpnII | GATC | 3 cut(s) | 203, 237, 271 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 56 |
| EarI | CTCTTC | 2 cut(s) | 35, 56 |
| Eco130I | CCWWGG | 1 cut(s) | 176 |
| Eco24I | GRGCYC | 1 cut(s) | 433 |
| Eco31I | GGTCTC | 1 cut(s) | 78 |
| Eco91I | GGTNACC | 1 cut(s) | 370 |
| EcoO65I | GGTNACC | 1 cut(s) | 370 |
| EcoT14I | CCWWGG | 1 cut(s) | 176 |
| EcoT22I | ATGCAT | 1 cut(s) | 390 |
| EcoT38I | GRGCYC | 1 cut(s) | 433 |
| ErhI | CCWWGG | 1 cut(s) | 176 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 5 cut(s) | 150, 261, 390, 392, 478 |
| FatI | CATG | 1 cut(s) | 148 |
| FauNDI | CATATG | 1 cut(s) | 390 |
| FbaI | TGATCA | 1 cut(s) | 271 |
| FokI | GGATG | 2 cut(s) | 103, 397 |
| FriOI | GRGCYC | 1 cut(s) | 433 |
| FspBI | CTAG | 1 cut(s) | 507 |
| HaeIII | GGCC | 2 cut(s) | 5, 171 |
| Hin1I | GRCGYC | 1 cut(s) | 144 |
| Hin1II | CATG | 1 cut(s) | 152 |
| HinfI | GANTC | 3 cut(s) | 343, 407, 515 |
| HphI | GGTGA | 1 cut(s) | 7 |
| Hpy166II | GTNNAC | 2 cut(s) | 265, 283 |
| Hpy188I | TCNGA | 6 cut(s) | 58, 83, 220, 331, 406, 439 |
| Hpy188III | TCNNGA | 2 cut(s) | 235, 245 |
| Hpy8I | GTNNAC | 2 cut(s) | 265, 283 |
| Hpy99I | CGWCG | 1 cut(s) | 224 |
| HpyAV | CCTTC | 2 cut(s) | 44, 241 |
| HpyCH4III | ACNGT | 3 cut(s) | 113, 376, 459 |
| HpyCH4IV | ACGT | 3 cut(s) | 144, 198, 423 |
| HpyCH4V | TGCA | 1 cut(s) | 388 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 492 |
| HpyF3I | CTNAG | 3 cut(s) | 55, 80, 311 |
| HpySE526I | ACGT | 3 cut(s) | 144, 198, 423 |
| Hsp92I | GRCGYC | 1 cut(s) | 144 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Ksp22I | TGATCA | 1 cut(s) | 271 |
| Kzo9I | GATC | 3 cut(s) | 203, 237, 271 |
| LmnI | GCTCC | 2 cut(s) | 132, 503 |
| LpnPI | CCDG | 2 cut(s) | 462, 486 |
| LweI | GCATC | 1 cut(s) | 375 |
| MaeI | CTAG | 1 cut(s) | 507 |
| MaeII | ACGT | 3 cut(s) | 144, 198, 423 |
| MaeIII | GTNAC | 3 cut(s) | 186, 370, 376 |
| MalI | GATC | 3 cut(s) | 205, 239, 273 |
| MboI | GATC | 3 cut(s) | 203, 237, 271 |
| MboII | GAAGA | 2 cut(s) | 22, 43 |
| MflI | RGATCY | 2 cut(s) | 203, 237 |
| MhlI | GDGCHC | 1 cut(s) | 433 |
| MluCI | AATT | 2 cut(s) | 65, 443 |
| MlyI | GAGTC | 1 cut(s) | 524 |
| MmeI | TCCRAC | 1 cut(s) | 243 |
| Mph1103I | ATGCAT | 1 cut(s) | 390 |
| MseI | TTAA | 1 cut(s) | 300 |
| MvnI | CGCG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 492 |
| NdeI | CATATG | 1 cut(s) | 390 |
| NdeII | GATC | 3 cut(s) | 203, 237, 271 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NlaIV | GGNNCC | 1 cut(s) | 229 |
| NmeAIII | GCCGAG | 1 cut(s) | 521 |
| NmuCI | GTSAC | 1 cut(s) | 376 |
| NsiI | ATGCAT | 1 cut(s) | 390 |
| PfeI | GAWTC | 2 cut(s) | 343, 407 |
| PleI | GAGTC | 1 cut(s) | 523 |
| PpsI | GAGTC | 1 cut(s) | 523 |
| PspEI | GGTNACC | 1 cut(s) | 370 |
| PspN4I | GGNNCC | 1 cut(s) | 229 |
| PsuI | RGATCY | 2 cut(s) | 203, 237 |
| RsaI | GTAC | 2 cut(s) | 167, 284 |
| RsaNI | GTAC | 2 cut(s) | 166, 283 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| Sau3AI | GATC | 3 cut(s) | 203, 237, 271 |
| SchI | GAGTC | 1 cut(s) | 524 |
| SduI | GDGCHC | 1 cut(s) | 433 |
| SfaNI | GCATC | 1 cut(s) | 375 |
| Sse9I | AATT | 2 cut(s) | 65, 443 |
| SspMI | CTAG | 1 cut(s) | 507 |
| StyI | CCWWGG | 1 cut(s) | 176 |
| TaaI | ACNGT | 3 cut(s) | 113, 376, 459 |
| TaiI | ACGT | 3 cut(s) | 147, 201, 426 |
| TaqI | TCGA | 4 cut(s) | 234, 246, 462, 518 |
| TasI | AATT | 2 cut(s) | 65, 443 |
| TatI | WGTACW | 1 cut(s) | 282 |
| TfiI | GAWTC | 2 cut(s) | 343, 407 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TseFI | GTSAC | 1 cut(s) | 376 |
| Tsp45I | GTSAC | 1 cut(s) | 376 |
| XspI | CTAG | 1 cut(s) | 507 |
| ZraI | GACGTC | 1 cut(s) | 145 |
| Zsp2I | ATGCAT | 1 cut(s) | 390 |