Rorug05G0591500

B3 domain-containing transcription factor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
78932045 .. 78935773
3729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0591500.1

Sequence Viewer

Length: 2028 bp
ATGGGAATTTCCTTTTCTTGCCCATTTTCTGAGGACTGTGATTTGGAAAGTGCGTTAGAATCAGTAACTGTAAAATCTATCAGTTTTGGAGATGATGAAGTAAAAACTCCAGTTAGATCAGTTAGTTTCAACCGCGGTGATGCAGAACCTTTGATAATGAGAGCCTTAGGTTCTGGAAAGATGACATTAGAAACTTCTGTTAGCTTTAAAGGGGATGAGTTAGAGAAAATGGGCTTGCTTAAGTTTCCTTCATTAGATAAAGAAAAGAGTATTGCCATTACATCAGTTAGCCCCCTTTGCAAAAAAGTGGACATTGGATCAATCAGTGCCGTTAGCAAAGAAATGGACATTCAATCCCCGAGATCAGATAATTCGGTGGGGATGATCCGACCCGTGCAAACAGATTTCACCAACCCCAAACACATGGCGGCAATTAAGTTGCAGAAAGTGTACAAAAGCTTTCGGACCAGAAGAAAGCTAGCAGATTGTGCAGTTCTAGTTGAGCAGAGCTGGTGGAAGCTATTAGATTTCGCTGAGCTTAAGCGGAGTTCTATATCATTCTTTGAAATTGAGAAACATGAAACTGCCATTTCACGTTGGTCTAGAGCAAGGACCAGAGCTGCCAAGGTTGGAAAGGGTTTATCAAAGAATAGTAAAGCACAAAAACTTGCTTTGCAGCACTGGCTTGAAGCGATTGATCCAAGGCACCGATATGGACACAATCTACACTTTTATTACATTAAGTGGCTTCATTGTCAGAGTAGAGAACCATTCTTCTACTGGCTAGATATAGGTGAAGGGAAGGAAGTGAATCTTGAAAAATGCCCTCGATCCAAACTTCAACAGCAGTGTATCAAGTATCTTGGTCCGATGGAAAGAATGGCCTATGAAGTTGTTGTGGAGGATGGAAAATTATTCTACAAGCAATCAGGGGAGCTCCTCCATACATCTGGAGAAGACAAGGATGCCAAATGGATTTTTGTTCTCAGCACTTCGAAAATCTTATATGTTGGCAAGAAACAGAAGGGCACATTTCAGCATTCCAGTTTTTTGGCTGGAGGAGCCACATCTGCTGCTGGGAGATTAGTTATTGAGAATGGCATTATCAAGGCAGTTTGGCCTCACAGTGGTCATTATAGACCAACAGAAGAGAATTTCAGAGACTTTGTTTCATTCCTTAAAGAGAACAATGTGGATCTCACTGATGTTAAGATGAGTCCAGTTGATGAAGAAGAAGGTTCACTTAGCAAGAAAAGAAGCAGTGCTCATCTGAGAAGCTACTCAGCTGAAGAGGAGTTAATCCCAGATCTATGTGACTTAAAAACTGAAAATACCATTGTTCGAGACTCTAGTAGGAAGGAGACTGATTCAATGGAGCAAGCTGTTGCAATGGAATCAAAGATAGCAAGCCGGCTCCACAGGCTTAGCCGAAAATTATCTAATCTTGAAATACCAAAAAGAGAAAGTTCGCTTGAGAGTGAAAGTCAAGCAGCTGCTTCAAGTTGCAACAATTTCCCTGTAGAATCTTCGGTACCAACAGAAGTACATCAACCATCAGAACAGGAATACATGGTTCCAAAGCAGAACTTGTTCGATGAAAACCATGAAGAGACTGAGGAAGAAACCATTCCTGAAGAATCGATTCTCAAAAGGATTAACTCACTCAAAGGAATGAAATCATATCAATTGGGAAAGCAGTTATCCTGCAAATGGACAACAGGAGCTGGACCTCGCATAGGTTGCGTAAGGGACTATCCTTCAGAGCTCCAGTTTCGAGCTCTGGAGCATGTCAACTTGTCTCCAAGAAAGGCTAACCGTCCTAGATCATACTTCTCTCCTCGGATCACTAATGTATCGAGTCCAACACTGCTGTCACCCACAACATGTGGCGGGGAGGTGGCGGCAATCTTAAGTCCAGCCGCATTTGATAGAGCAAGCTTGTTATCCAGAAGCTTTAAGCCTGCTAGAACACAGTCCTCTCCATTGTTTGTAGGAAGTAGAGTAACCAAAATCACTAATGTTTCATGA

Protein Analysis

675

Amino Acids

75.94

Weight (kDa)

8.81

Isoelectric Point (pI)

54.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000235)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22700 FvH4_2g06920 FvH4_2g06920 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06970 FvH4_2g06970 FvH4_2g07230 FvH4_2g07231 FvH4_2g07231 FvH4_2g07240 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_4g19990 FvH4_4g19990 FvH4_4g19990 FvH4_4g20070
malus_domestica MD05G1072700.v1.1
prunus_persica Prupe.8G113100_v2.0.a1
pyrus_communis pycom05g06500 pycom10g06950
rosa_chinensis RchiOBHm_Chr4g0425711 RchiOBHm_Chr6g0259241 RchiOBHm_Chr6g0259251 RchiOBHm_Chr6g0259321 RchiOBHm_Chr6g0259331 RchiOBHm_Chr6g0259781 RchiOBHm_Chr6g0259791 RchiOBHm_Chr6g0259811 RchiOBHm_Chr6g0259881 RchiOBHm_Chr6g0259931
rosa_laevigata RLG00000007345 RLG00000014500 RLG00000014501 RLG00000014505 RLG00000014506 RLG00000014507 RLG00000014539 RLG00000014540 RLG00000014545 RLG00000014546
rosa_multiflora Rmu_co8137334.1_g000001 Rmu_co8454279.1_g000001 Rmu_co8476373.1_g000001 Rmu_sc0001078.1_g000001 Rmu_sc0003958.1_g000011 Rmu_sc0009049.1_g000001 Rmu_sc0009049.1_g000009 Rmu_sc0010546.1_g000001 Rmu_sc0011974.1_g000002 Rmu_sc0011974.1_g000003 Rmu_sc0033846.1_g000001 Rmu_sc0036999.1_g000001 Rmu_ssc0000052.1_g000015
rosa_roxburghii Rroxscaffold_5G00367690 Rroxscaffold_7G00206530 Rroxscaffold_7G00206540 Rroxscaffold_7G00206560 Rroxscaffold_7G00206570 Rroxscaffold_7G00207020 Rroxscaffold_7G00207030 Rroxscaffold_7G00207150 Rroxscaffold_7G00207160 Rroxscaffold_7G00207170 Rroxscaffold_7G00207270
rosa_rugosa Rorug04G0205300 Rorug05G0586300 Rorug05G0586400 Rorug05G0586500 Rorug05G0586600 Rorug05G0586700 Rorug05G0587300 Rorug05G0587400 Rorug05G0587500 Rorug05G0587600 Rorug05G0590500 Rorug05G0590600 Rorug05G0591200 Rorug05G0591300 Rorug05G0591400 Rorug05G0591500
rosa_samantha Rh4AG262200 Rh4BG268500 Rh4CG279700 Rh4DG264100 Rh6AG103100 Rh6AG103600 Rh6AG107100 Rh6AG107200 Rh6AG107700 Rh6BG095400 Rh6BG095500 Rh6BG095900 Rh6BG096000 Rh6BG096800 Rh6BG102600 Rh6BG102700 Rh6BG102800 Rh6BG103800 Rh6CG092300 Rh6CG092400 Rh6CG092800 Rh6CG092900 Rh6CG096200 Rh6CG096300 Rh6CG096800 Rh6CG097100 Rh6DG086300 Rh6DG086400 Rh6DG086700 Rh6DG086800 Rh6DG090000 Rh6DG090100 Rh6DG090500 Rh6DG090800
rosa_wichuraiana Rw4G022670 Rw6G008900 Rw6G008940 Rw6G009250 Rw6G009280 Rw6G009330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1531
AccB1I GGYRCC 2 cut(s) 705, 1531
AccII CGCG 1 cut(s) 135
AciI CCGC 7 cut(s) 133, 135, 428, 544, 1890, 1901, 1920
AclWI GGATC 6 cut(s) 325, 379, 692, 825, 1203, 1850
AcsI RAATTY 2 cut(s) 6, 1153
AcuI CTGAAG 3 cut(s) 1308, 1653, 1743
AfaI GTAC 3 cut(s) 452, 1533, 1545
AfiI CCNNNNNNNGG 3 cut(s) 1127, 1710, 1736
AflII CTTAAG 3 cut(s) 239, 539, 1909
AflIII ACRYGT 1 cut(s) 1883
AgsI TTSAA 9 cut(s) 130, 353, 566, 689, 818, 842, 1371, 1448, 1500
Alw21I GWGCWC 4 cut(s) 939, 1267, 1767, 1780
Alw26I GTCTC 5 cut(s) 1155, 1338, 1355, 1604, 1803
AlwI GGATC 6 cut(s) 325, 379, 692, 825, 1203, 1850
AlwNI CAGNNNCTG 2 cut(s) 68, 1724
Ama87I CYCGRG 1 cut(s) 358
AoxI GGCC 2 cut(s) 882, 1118
ApeKI GCWGC 5 cut(s) 620, 676, 1073, 1490, 1493
ApoI RAATTY 2 cut(s) 6, 1153
Asp700I GAANNNNTTC 3 cut(s) 1589, 1626, 1641
Asp718I GGTACC 1 cut(s) 1531
AspS9I GGNCC 4 cut(s) 465, 612, 866, 1727
AsuHPI GGTGA 4 cut(s) 149, 400, 806, 1866
AsuII TTCGAA 1 cut(s) 995
AsuNHI GCTAGC 1 cut(s) 478
AvaI CYCGRG 1 cut(s) 358
AvaII GGWCC 4 cut(s) 465, 612, 866, 1727
AxyI CCTNAGG 1 cut(s) 166
BaeGI GKGCMC 1 cut(s) 1031
BaeI ACNNNNGTAYC 2 cut(s) 1836, 1869
BanI GGYRCC 2 cut(s) 705, 1531
BanII GRGCYC 3 cut(s) 939, 1767, 1780
BbsI GAAGAC 1 cut(s) 963
Bbv12I GWGCWC 4 cut(s) 939, 1267, 1767, 1780
BbvI GCAGC 5 cut(s) 607, 688, 1060, 1480, 1502
BccI CCATC 3 cut(s) 865, 899, 1561
BceAI ACGGC 1 cut(s) 314
BcoDI GTCTC 5 cut(s) 1155, 1338, 1355, 1604, 1803
BfaI CTAG 7 cut(s) 479, 497, 603, 785, 1350, 1821, 1965
BfmI CTRYAG 1 cut(s) 1518
BfrI CTTAAG 3 cut(s) 239, 539, 1909
BglII AGATCT 1 cut(s) 1306
BisI GCNGC 8 cut(s) 429, 621, 677, 1074, 1491, 1494, 1902, 1920
BlpI GCTNAGC 2 cut(s) 534, 1424
BlsI GCNGC 8 cut(s) 430, 622, 678, 1075, 1492, 1495, 1903, 1921
Bme18I GGWCC 4 cut(s) 465, 612, 866, 1727
BmeT110I CYCGRG 1 cut(s) 358
BmgT120I GGNCC 4 cut(s) 465, 612, 866, 1727
BmiI GGNNCC 5 cut(s) 707, 1063, 1415, 1533, 1575
BmsI GCATC 2 cut(s) 130, 955
BmtI GCTAGC 1 cut(s) 482
BpiI GAAGAC 1 cut(s) 963
BpmI CTGGAG 5 cut(s) 93, 972, 1077, 1751, 1802
Bpu1102I GCTNAGC 2 cut(s) 534, 1424
Bpu14I TTCGAA 1 cut(s) 995
BpuEI CTTGAG 1 cut(s) 1493
Bsa29I ATCGAT 1 cut(s) 1640
BsaJI CCNNGG 4 cut(s) 133, 624, 701, 1838
Bsc4I CCNNNNNNNGG 3 cut(s) 1127, 1710, 1736
Bse118I RCCGGY 1 cut(s) 1410
Bse1I ACTGG 6 cut(s) 110, 686, 785, 1044, 1220, 1768
Bse21I CCTNAGG 1 cut(s) 166
Bse3DI GCAATG 1 cut(s) 1395
BseCI ATCGAT 1 cut(s) 1640
BseDI CCNNGG 4 cut(s) 133, 624, 701, 1838
BseGI GGATG 4 cut(s) 220, 387, 910, 970
BseLI CCNNNNNNNGG 3 cut(s) 1127, 1710, 1736
BseMI GCAATG 1 cut(s) 1395
BseMII CTCAG 6 cut(s) 21, 525, 1000, 1262, 1296, 1605
BseNI ACTGG 6 cut(s) 110, 686, 785, 1044, 1220, 1768
BseRI GAGGAG 4 cut(s) 929, 1074, 1307, 1827
BseSI GKGCMC 1 cut(s) 1031
BseXI GCAGC 5 cut(s) 607, 688, 1060, 1480, 1502
BseYI CCCAGC 1 cut(s) 1076
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 1 cut(s) 135
BshFI GGCC 2 cut(s) 884, 1120
BshNI GGYRCC 2 cut(s) 705, 1531
BshVI ATCGAT 1 cut(s) 1640
BsiHKAI GWGCWC 4 cut(s) 939, 1267, 1767, 1780
BsiHKCI CYCGRG 1 cut(s) 358
BsiSI CCGG 1 cut(s) 1411
BslFI GGGAC 1 cut(s) 1763
BslI CCNNNNNNNGG 3 cut(s) 1127, 1710, 1736
BsmAI GTCTC 5 cut(s) 1155, 1338, 1355, 1604, 1803
BsmFI GGGAC 1 cut(s) 1763
BsmI GAATGC 1 cut(s) 1039
BsnI GGCC 2 cut(s) 884, 1120
BsoBI CYCGRG 1 cut(s) 358
Bsp119I TTCGAA 1 cut(s) 995
Bsp1286I GDGCHC 5 cut(s) 939, 1031, 1267, 1767, 1780
Bsp1407I TGTACA 1 cut(s) 450
Bsp1720I GCTNAGC 2 cut(s) 534, 1424
BspACI CCGC 7 cut(s) 133, 135, 428, 544, 1890, 1901, 1920
BspANI GGCC 2 cut(s) 884, 1120
BspCNI CTCAG 6 cut(s) 22, 526, 999, 1263, 1295, 1606
BspDI ATCGAT 1 cut(s) 1640
BspFNI CGCG 1 cut(s) 135
BspHI TCATGA 1 cut(s) 2024
BspLI GGNNCC 5 cut(s) 707, 1063, 1415, 1533, 1575
BspOI GCTAGC 1 cut(s) 482
BspPI GGATC 6 cut(s) 325, 379, 692, 825, 1203, 1850
BspT104I TTCGAA 1 cut(s) 995
BspT107I GGYRCC 2 cut(s) 705, 1531
BspTI CTTAAG 3 cut(s) 239, 539, 1909
BsrDI GCAATG 1 cut(s) 1395
BsrFI RCCGGY 1 cut(s) 1410
BsrGI TGTACA 1 cut(s) 450
BsrI ACTGG 6 cut(s) 110, 686, 785, 1044, 1220, 1768
BssAI RCCGGY 1 cut(s) 1410
BssECI CCNNGG 4 cut(s) 133, 624, 701, 1838
BssT1I CCWWGG 2 cut(s) 624, 701
Bst4CI ACNGT 5 cut(s) 38, 70, 1127, 1817, 1974
Bst6I CTCTTC 3 cut(s) 1143, 1284, 1602
BstAFI CTTAAG 3 cut(s) 239, 539, 1909
BstAPI GCANNNNNTGC 2 cut(s) 488, 1740
BstAUI TGTACA 1 cut(s) 450
BstBI TTCGAA 1 cut(s) 995
BstC8I GCNNGC 7 cut(s) 236, 480, 1380, 1408, 1412, 1936, 1962
BstDEI CTNAG 9 cut(s) 30, 166, 534, 986, 1244, 1271, 1282, 1424, 1614
BstDSI CCRYGG 1 cut(s) 133
BstENI CCTNNNNNAGG 1 cut(s) 1734
BstF5I GGATG 4 cut(s) 220, 387, 910, 970
BstFNI CGCG 1 cut(s) 135
BstMAI GTCTC 5 cut(s) 1155, 1338, 1355, 1604, 1803
BstMWI GCNNNNNNNGC 7 cut(s) 297, 488, 682, 1061, 1070, 1420, 1740
BstNSI RCATGY 2 cut(s) 1790, 1887
BstSFI CTRYAG 1 cut(s) 1518
BstSLI GKGCMC 1 cut(s) 1031
BstUI CGCG 1 cut(s) 135
BstV1I GCAGC 5 cut(s) 607, 688, 1060, 1480, 1502
BstV2I GAAGAC 1 cut(s) 963
BstX2I RGATCY 2 cut(s) 1195, 1306
BstXI CCANNNNNNTGG 3 cut(s) 424, 950, 1051
BstYI RGATCY 2 cut(s) 1195, 1306
Bsu15I ATCGAT 1 cut(s) 1640
Bsu36I CCTNAGG 1 cut(s) 166
BsuRI GGCC 2 cut(s) 884, 1120
BsuTUI ATCGAT 1 cut(s) 1640
BtgI CCRYGG 1 cut(s) 133
BtsCI GGATG 4 cut(s) 220, 387, 910, 970
BtsI GCAGTG 3 cut(s) 854, 1267, 1865
BtsIMutI CAGTG 7 cut(s) 331, 679, 854, 1132, 1200, 1267, 1865
Cac8I GCNNGC 7 cut(s) 236, 480, 1380, 1408, 1412, 1936, 1962
CaiI CAGNNNCTG 2 cut(s) 68, 1724
CciI TCATGA 1 cut(s) 2024
Cfr10I RCCGGY 1 cut(s) 1410
Cfr13I GGNCC 4 cut(s) 465, 612, 866, 1727
Cfr42I CCGCGG 1 cut(s) 136
ClaI ATCGAT 1 cut(s) 1640
Csp6I GTAC 3 cut(s) 451, 1532, 1544
CviAII CATG 7 cut(s) 424, 578, 1570, 1604, 1787, 1884, 2025
CviQI GTAC 3 cut(s) 451, 1532, 1544
DdeI CTNAG 9 cut(s) 30, 166, 534, 986, 1244, 1271, 1282, 1424, 1614
DraI TTTAAA 1 cut(s) 208
Eam1104I CTCTTC 3 cut(s) 1143, 1284, 1602
EarI CTCTTC 3 cut(s) 1143, 1284, 1602
Ecl136II GAGCTC 3 cut(s) 937, 1765, 1778
Eco130I CCWWGG 2 cut(s) 624, 701
Eco24I GRGCYC 3 cut(s) 939, 1767, 1780
Eco47I GGWCC 4 cut(s) 465, 612, 866, 1727
Eco53kI GAGCTC 3 cut(s) 937, 1765, 1778
Eco57I CTGAAG 3 cut(s) 1308, 1653, 1743
Eco81I CCTNAGG 1 cut(s) 166
Eco88I CYCGRG 1 cut(s) 358
EcoICRI GAGCTC 3 cut(s) 937, 1765, 1778
EcoNI CCTNNNNNAGG 1 cut(s) 1734
EcoT14I CCWWGG 2 cut(s) 624, 701
EcoT38I GRGCYC 3 cut(s) 939, 1767, 1780
ErhI CCWWGG 2 cut(s) 624, 701
FaeI CATG 7 cut(s) 427, 581, 1573, 1607, 1790, 1887, 2028
FalI AAGNNNNNCTT 6 cut(s) 798, 830, 1227, 1259, 1571, 1603
FaqI GGGAC 1 cut(s) 1763
FatI CATG 7 cut(s) 423, 577, 1569, 1603, 1786, 1883, 2024
FauI CCCGC 1 cut(s) 1883
Fnu4HI GCNGC 8 cut(s) 429, 621, 677, 1074, 1491, 1494, 1902, 1920
FokI GGATG 4 cut(s) 227, 394, 917, 977
FriOI GRGCYC 3 cut(s) 939, 1767, 1780
Fsp4HI GCNGC 8 cut(s) 429, 621, 677, 1074, 1491, 1494, 1902, 1920
FspBI CTAG 7 cut(s) 479, 497, 603, 785, 1350, 1821, 1965
GluI GCNGC 8 cut(s) 429, 621, 677, 1074, 1491, 1494, 1902, 1920
GsaI CCCAGC 1 cut(s) 1080
GsuI CTGGAG 5 cut(s) 93, 972, 1077, 1751, 1802
HaeIII GGCC 2 cut(s) 884, 1120
HapII CCGG 1 cut(s) 1411
Hin1II CATG 7 cut(s) 427, 581, 1573, 1607, 1790, 1887, 2028
HincII GTYRAC 1 cut(s) 1792
HindII GTYRAC 1 cut(s) 1792
HindIII AAGCTT 3 cut(s) 457, 1936, 1951
HpaII CCGG 1 cut(s) 1411
HphI GGTGA 4 cut(s) 149, 400, 806, 1866
Hpy166II GTNNAC 4 cut(s) 310, 451, 1241, 1792
Hpy8I GTNNAC 4 cut(s) 310, 451, 1241, 1792
HpyAV CCTTC 7 cut(s) 258, 791, 796, 1018, 1229, 1351, 1767
HpyCH4III ACNGT 5 cut(s) 38, 70, 1127, 1817, 1974
HpyCH4IV ACGT 1 cut(s) 595
HpyCH4V TGCA 9 cut(s) 143, 300, 397, 442, 491, 676, 1388, 1506, 1707
HpyF10VI GCNNNNNNNGC 7 cut(s) 297, 488, 682, 1061, 1070, 1420, 1740
HpyF3I CTNAG 9 cut(s) 30, 166, 534, 986, 1244, 1271, 1282, 1424, 1614
HpySE526I ACGT 1 cut(s) 595
Hsp92II CATG 7 cut(s) 427, 581, 1573, 1607, 1790, 1887, 2028
KpnI GGTACC 1 cut(s) 1535
KroI GCCGGC 1 cut(s) 1410
KroNI GCCGGC 1 cut(s) 1412
KspI CCGCGG 1 cut(s) 136
LmnI GCTCC 8 cut(s) 934, 942, 1061, 1375, 1419, 1721, 1770, 1783
Lsp1109I GCAGC 5 cut(s) 607, 688, 1060, 1480, 1502
LweI GCATC 2 cut(s) 130, 955
MaeI CTAG 7 cut(s) 479, 497, 603, 785, 1350, 1821, 1965
MaeII ACGT 1 cut(s) 595
MaeIII GTNAC 4 cut(s) 64, 1313, 1872, 2002
MfeI CAATTG 1 cut(s) 1685
MflI RGATCY 2 cut(s) 1195, 1306
MhlI GDGCHC 5 cut(s) 939, 1031, 1267, 1767, 1780
MluCI AATT 9 cut(s) 6, 370, 432, 567, 911, 1153, 1433, 1510, 1685
MlyI GAGTC 3 cut(s) 1225, 1340, 1867
MmeI TCCRAC 3 cut(s) 412, 610, 1886
MroNI GCCGGC 1 cut(s) 1410
MroXI GAANNNNTTC 3 cut(s) 1589, 1626, 1641
MslI CAYNNNNRTG 1 cut(s) 711
MspA1I CMGCKG 3 cut(s) 135, 1286, 1493
MspCI CTTAAG 3 cut(s) 239, 539, 1909
MspI CCGG 1 cut(s) 1411
MunI CAATTG 1 cut(s) 1685
Mva1269I GAATGC 1 cut(s) 1039
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 7 cut(s) 297, 488, 682, 1061, 1070, 1420, 1740
NaeI GCCGGC 1 cut(s) 1412
NgoMIV GCCGGC 1 cut(s) 1410
NheI GCTAGC 1 cut(s) 478
NlaIII CATG 7 cut(s) 427, 581, 1573, 1607, 1790, 1887, 2028
NlaIV GGNNCC 5 cut(s) 707, 1063, 1415, 1533, 1575
NmuCI GTSAC 2 cut(s) 1313, 1872
NspI RCATGY 2 cut(s) 1790, 1887
NspV TTCGAA 1 cut(s) 995
PagI TCATGA 1 cut(s) 2024
PciI ACATGT 1 cut(s) 1883
PctI GAATGC 1 cut(s) 1039
PdiI GCCGGC 1 cut(s) 1412
PdmI GAANNNNTTC 3 cut(s) 1589, 1626, 1641
PfeI GAWTC 7 cut(s) 59, 811, 1367, 1394, 1523, 1637, 1642
PkrI GCNGC 8 cut(s) 430, 622, 678, 1075, 1492, 1495, 1903, 1921
PleI GAGTC 3 cut(s) 1224, 1340, 1866
PpsI GAGTC 3 cut(s) 1224, 1340, 1866
PscI ACATGT 1 cut(s) 1883
Psp124BI GAGCTC 3 cut(s) 939, 1767, 1780
PspFI CCCAGC 1 cut(s) 1076
PspN4I GGNNCC 5 cut(s) 707, 1063, 1415, 1533, 1575
PspPI GGNCC 4 cut(s) 465, 612, 866, 1727
PstNI CAGNNNCTG 2 cut(s) 68, 1724
PsuI RGATCY 2 cut(s) 1195, 1306
PvuII CAGCTG 2 cut(s) 1286, 1493
RsaI GTAC 3 cut(s) 452, 1533, 1545
RsaNI GTAC 3 cut(s) 451, 1532, 1544
RseI CAYNNNNRTG 1 cut(s) 711
SacI GAGCTC 3 cut(s) 939, 1767, 1780
SacII CCGCGG 1 cut(s) 136
SatI GCNGC 8 cut(s) 429, 621, 677, 1074, 1491, 1494, 1902, 1920
Sau96I GGNCC 4 cut(s) 465, 612, 866, 1727
SchI GAGTC 3 cut(s) 1225, 1340, 1867
SduI GDGCHC 5 cut(s) 939, 1031, 1267, 1767, 1780
SfaNI GCATC 2 cut(s) 130, 955
SfcI CTRYAG 1 cut(s) 1518
Sfr303I CCGCGG 1 cut(s) 136
SfuI TTCGAA 1 cut(s) 995
SgrBI CCGCGG 1 cut(s) 136
SinI GGWCC 4 cut(s) 465, 612, 866, 1727
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 4 cut(s) 239, 539, 1472, 1909
SmoI CTYRAG 4 cut(s) 239, 539, 1472, 1909
Sse9I AATT 9 cut(s) 6, 370, 432, 567, 911, 1153, 1433, 1510, 1685
SsiI CCGC 7 cut(s) 133, 135, 428, 544, 1890, 1901, 1920
SspMI CTAG 7 cut(s) 479, 497, 603, 785, 1350, 1821, 1965
SstI GAGCTC 3 cut(s) 939, 1767, 1780
StyI CCWWGG 2 cut(s) 624, 701
TaaI ACNGT 5 cut(s) 38, 70, 1127, 1817, 1974
TaiI ACGT 1 cut(s) 598
TaqI TCGA 7 cut(s) 829, 995, 1342, 1593, 1640, 1774, 1856
TasI AATT 9 cut(s) 6, 370, 432, 567, 911, 1153, 1433, 1510, 1685
TatI WGTACW 2 cut(s) 450, 1543
TauI GCSGC 3 cut(s) 431, 1904, 1922
TfiI GAWTC 7 cut(s) 59, 811, 1367, 1394, 1523, 1637, 1642
TscAI CASTG 7 cut(s) 331, 686, 854, 1132, 1207, 1267, 1872
TseFI GTSAC 2 cut(s) 1313, 1872
TseI GCWGC 5 cut(s) 620, 676, 1073, 1490, 1493
Tsp45I GTSAC 2 cut(s) 1313, 1872
TspRI CASTG 7 cut(s) 331, 686, 854, 1132, 1207, 1267, 1872
Vha464I CTTAAG 3 cut(s) 239, 539, 1909
VpaK11BI GGWCC 4 cut(s) 465, 612, 866, 1727
XagI CCTNNNNNAGG 1 cut(s) 1734
XapI RAATTY 2 cut(s) 6, 1153
XbaI TCTAGA 1 cut(s) 602
XceI RCATGY 2 cut(s) 1790, 1887
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XmnI GAANNNNTTC 3 cut(s) 1589, 1626, 1641
XspI CTAG 7 cut(s) 479, 497, 603, 785, 1350, 1821, 1965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.