Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000235

Physical Location & Seq

Genomic Coordinates Forward (+)

78886311 .. 78887897

Gene Structure 1587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0590600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGCATAAAGATCAATTCTTGGCTGAAATGGGGATTCCTAAAGTCCCCGAGTGGATTCCGGGCCTGCAGGAAGAGCTCGGCCTCGAGTGCCTGACCCGGCTTCCGTACTCGGCCCACCCGACCGCCTCCCGGGTCTGCCGTCCGTGGCGGTCCTTGCTCGAAAGCGAGGACTTCTATCGCCACAGGAAGCAGAACGGGTACACCCGAAACGTGGCCTGTTTGGTCCAGGCCGTTGCCGTTGCAGTTGCTGTCGAATTGAACACGGGCCCCAAATCGGGTGCCGGAGGCTCGCCGAGTTACGGAATCGCCGTGTTTGACTCGGTGAGTGGGACCTGGGAGCGGCTCGACCCGATTCCCAAGTACCCGAATGGGCTGCCGATGTTTTGTCAGGTGGCGAGCTGCGAGGGGAAGCTGGTGGTGATGGGCGGGTGGGATCCGGCGACGTACAAGCCGGTCACCGACGTGTTCGTGTACGAGTTTACGACGTGTCGTTGGAGGAGGGGGACGGCAATGCCGTCGAAGCGGTCGTTTTTCGCGATCGGGTCGCGCGGGAGTCGGGTTTACATTGCGGGCGGGCACGACGAGAGCAAGAACGCGCTGAATTCGGCGTGGGTTTACGATCTGAGGCGGGACGAGTGGGCCGAGTTGACTCAGATGAGTCGGGAGCGGGACGAGTGTCATGGGTTGGTGATCGGGGACGAGTTCTGGGTCGTGAGCGGGTACGGGACGGCGAGCCAGGGAGCGTTTGAGGGCGGAGCGGAGGTGTTGGATCTCGGGTCGGGTCGGTGGAGGCGGGTCGAGGGCGCGTGGGAGGAAGGGCAGTGTCCGAGGGCGTGTGGGGGTGGAGTTGGGAGAGATGGGAGGCTGGTGAGTTGGGCCGAGTTTGGCGCGGCGGTCCGGGTCGGGACCCGTGGGGTGAATCTCGGGTCCCGGGTCCTGGTGATGGGTTCGGAGTACGATGGCGGGAGCCAAGGGGTATTCATGAAGGATGGGCAAAATGGTAAATTAGAGAGGGTTAGTGTGCCTGAAGAGTTTTCTGGGTTTATTCAATCAGGCTGTTGCGTTGAGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

357

Amino Acids

39.08

Weight (kDa)

5.87

Isoelectric Point (pI)

47.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kelch_KLHDC2_KLHL20_DRC7	PF24681	101 - 277	3.9e-16	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	104 - 244	1.2e-10	FBX42, beta-propeller domain
Kelch_FKB95	PF25210	117 - 241	5.1e-09	FKB95, Kelch-repeats domain
Kelch_1	PF01344	129 - 172	4.6e-07	Kelch motif
Beta-prop_Calicin	PF13964	139 - 230	4.1e-10	Calicin, beta-propeller domain
Beta-prop_ATRN-LZTR1	PF24981	140 - 223	8.6e-06	Attractin/LZTR1 beta-propeller
Beta-prop_ATRN-LZTR1	PF24981	140 - 266	2.5e-06	Attractin/LZTR1 beta-propeller
Kelch_1	PF01344	175 - 220	2.3e-10	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000235)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22700 FvH4_2g06920 FvH4_2g06920 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06970 FvH4_2g06970 FvH4_2g07230 FvH4_2g07231 FvH4_2g07231 FvH4_2g07240 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_4g19990 FvH4_4g19990 FvH4_4g19990 FvH4_4g20070
malus_domestica	MD05G1072700.v1.1
prunus_persica	Prupe.8G113100_v2.0.a1
pyrus_communis	pycom05g06500 pycom10g06950
rosa_chinensis	RchiOBHm_Chr4g0425711 RchiOBHm_Chr6g0259241 RchiOBHm_Chr6g0259251 RchiOBHm_Chr6g0259321 RchiOBHm_Chr6g0259331 RchiOBHm_Chr6g0259781 RchiOBHm_Chr6g0259791 RchiOBHm_Chr6g0259811 RchiOBHm_Chr6g0259881 RchiOBHm_Chr6g0259931
rosa_laevigata	RLG00000007345 RLG00000014500 RLG00000014501 RLG00000014505 RLG00000014506 RLG00000014507 RLG00000014539 RLG00000014540 RLG00000014545 RLG00000014546
rosa_multiflora	Rmu_co8137334.1_g000001 Rmu_co8454279.1_g000001 Rmu_co8476373.1_g000001 Rmu_sc0001078.1_g000001 Rmu_sc0003958.1_g000011 Rmu_sc0009049.1_g000001 Rmu_sc0009049.1_g000009 Rmu_sc0010546.1_g000001 Rmu_sc0011974.1_g000002 Rmu_sc0011974.1_g000003 Rmu_sc0033846.1_g000001 Rmu_sc0036999.1_g000001 Rmu_ssc0000052.1_g000015
rosa_roxburghii	Rroxscaffold_5G00367690 Rroxscaffold_7G00206530 Rroxscaffold_7G00206540 Rroxscaffold_7G00206560 Rroxscaffold_7G00206570 Rroxscaffold_7G00207020 Rroxscaffold_7G00207030 Rroxscaffold_7G00207150 Rroxscaffold_7G00207160 Rroxscaffold_7G00207170 Rroxscaffold_7G00207270
rosa_rugosa	Rorug04G0205300 Rorug05G0586300 Rorug05G0586400 Rorug05G0586500 Rorug05G0586600 Rorug05G0586700 Rorug05G0587300 Rorug05G0587400 Rorug05G0587500 Rorug05G0587600 Rorug05G0590500 Rorug05G0590600 Rorug05G0591200 Rorug05G0591300 Rorug05G0591400 Rorug05G0591500
rosa_samantha	Rh4AG262200 Rh4BG268500 Rh4CG279700 Rh4DG264100 Rh6AG103100 Rh6AG103600 Rh6AG107100 Rh6AG107200 Rh6AG107700 Rh6BG095400 Rh6BG095500 Rh6BG095900 Rh6BG096000 Rh6BG096800 Rh6BG102600 Rh6BG102700 Rh6BG102800 Rh6BG103800 Rh6CG092300 Rh6CG092400 Rh6CG092800 Rh6CG092900 Rh6CG096200 Rh6CG096300 Rh6CG096800 Rh6CG097100 Rh6DG086300 Rh6DG086400 Rh6DG086700 Rh6DG086800 Rh6DG090000 Rh6DG090100 Rh6DG090500 Rh6DG090800
rosa_wichuraiana	Rw4G022670 Rw6G008900 Rw6G008940 Rw6G009250 Rw6G009280 Rw6G009330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	278
AccBSI	CCGCTC	4 cut(s)	340, 667, 717, 758
AccII	CGCG	6 cut(s)	536, 547, 549, 596, 806, 890
AclWI	GGATC	3 cut(s)	428, 441, 777
AcsI	RAATTY	1 cut(s)	601
AcuI	CTGAAG	1 cut(s)	1047
AfaI	GTAC	7 cut(s)	107, 200, 362, 446, 473, 722, 956
AfiI	CCNNNNNNNGG	8 cut(s)	129, 211, 274, 275, 299, 339, 937, 943
AflIII	ACRYGT	2 cut(s)	462, 485
AgsI	TTSAA	2 cut(s)	259, 1049
AjiI	CACGTC	2 cut(s)	463, 486
AjnI	CCWGG	4 cut(s)	225, 332, 735, 936
AleI	CACNNNNGTG	1 cut(s)	461
AluBI	AGCT	3 cut(s)	76, 399, 412
AluI	AGCT	3 cut(s)	76, 399, 412
Alw21I	GWGCWC	1 cut(s)	78
AlwI	GGATC	3 cut(s)	428, 441, 777
AlwNI	CAGNNNCTG	1 cut(s)	248
Ama87I	CYCGRG	6 cut(s)	47, 83, 129, 773, 923, 930
AoxI	GGCC	8 cut(s)	61, 79, 111, 213, 228, 265, 639, 876
ApaI	GGGCCC	1 cut(s)	269
ApeKI	GCWGC	2 cut(s)	373, 399
ApoI	RAATTY	1 cut(s)	601
AspLEI	GCGC	4 cut(s)	549, 598, 806, 890
AsuC2I	CCSGG	7 cut(s)	60, 97, 130, 131, 899, 931, 932
AsuHPI	GGTGA	7 cut(s)	334, 430, 448, 700, 880, 928, 952
AvaI	CYCGRG	6 cut(s)	47, 83, 129, 773, 923, 930
AvaII	GGWCC	7 cut(s)	150, 223, 330, 895, 906, 927, 934
BaeGI	GKGCMC	2 cut(s)	269, 579
BamHI	GGATCC	1 cut(s)	433
BanI	GGYRCC	1 cut(s)	278
BanII	GRGCYC	2 cut(s)	78, 269
Bbv12I	GWGCWC	1 cut(s)	78
BbvI	GCAGC	2 cut(s)	360, 386
BccI	CCATC	5 cut(s)	415, 851, 937, 953, 983
BceAI	ACGGC	7 cut(s)	123, 215, 221, 293, 499, 522, 744
BcgI	CGANNNNNNTGC	4 cut(s)	355, 389, 498, 532
BciT130I	CCWGG	4 cut(s)	227, 334, 737, 938
BcnI	CCSGG	7 cut(s)	60, 97, 130, 131, 899, 931, 932
BfmI	CTRYAG	1 cut(s)	65
BisI	GCNGC	4 cut(s)	341, 374, 400, 891
BlsI	GCNGC	4 cut(s)	342, 375, 401, 892
Bme18I	GGWCC	7 cut(s)	150, 223, 330, 895, 906, 927, 934
BmeT110I	CYCGRG	6 cut(s)	47, 83, 129, 773, 923, 930
BmgBI	CACGTC	2 cut(s)	463, 486
BoxI	GACNNNNGTC	1 cut(s)	675
BpuMI	CCSGG	7 cut(s)	60, 97, 130, 131, 899, 931, 932
BsaJI	CCNNGG	8 cut(s)	129, 143, 333, 736, 827, 910, 930, 970
BsaXI	ACNNNNNCTCC	2 cut(s)	747, 777
Bsc4I	CCNNNNNNNGG	8 cut(s)	129, 211, 274, 275, 299, 339, 937, 943
Bse118I	RCCGGY	1 cut(s)	451
Bse3DI	GCAATG	2 cut(s)	516, 564
BseBI	CCWGG	4 cut(s)	227, 334, 737, 938
BseDI	CCNNGG	8 cut(s)	129, 143, 333, 736, 827, 910, 930, 970
BseGI	GGATG	1 cut(s)	994
BseLI	CCNNNNNNNGG	8 cut(s)	129, 211, 274, 275, 299, 339, 937, 943
BseMI	GCAATG	2 cut(s)	516, 564
BseMII	CTCAG	2 cut(s)	614, 665
BseRI	GAGGAG	1 cut(s)	511
BseSI	GKGCMC	2 cut(s)	269, 579
BseXI	GCAGC	2 cut(s)	360, 386
Bsh1236I	CGCG	6 cut(s)	536, 547, 549, 596, 806, 890
Bsh1285I	CGRYCG	3 cut(s)	123, 527, 540
BshFI	GGCC	8 cut(s)	63, 81, 113, 215, 230, 267, 641, 878
BshNI	GGYRCC	1 cut(s)	278
BsiEI	CGRYCG	3 cut(s)	123, 527, 540
BsiHKAI	GWGCWC	1 cut(s)	78
BsiHKCI	CYCGRG	6 cut(s)	47, 83, 129, 773, 923, 930
BsiSI	CCGG	8 cut(s)	59, 97, 130, 282, 437, 452, 898, 931
BslFI	GGGAC	9 cut(s)	29, 343, 517, 644, 683, 710, 739, 913, 919
BslI	CCNNNNNNNGG	8 cut(s)	129, 211, 274, 275, 299, 339, 937, 943
BsmFI	GGGAC	9 cut(s)	29, 343, 517, 644, 683, 710, 739, 913, 919
BsnI	GGCC	8 cut(s)	63, 81, 113, 215, 230, 267, 641, 878
BsoBI	CYCGRG	6 cut(s)	47, 83, 129, 773, 923, 930
Bsp120I	GGGCCC	1 cut(s)	265
Bsp1286I	GDGCHC	3 cut(s)	78, 269, 579
Bsp143I	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
Bsp68I	TCGCGA	1 cut(s)	536
BspANI	GGCC	8 cut(s)	63, 81, 113, 215, 230, 267, 641, 878
BspCNI	CTCAG	2 cut(s)	615, 664
BspFNI	CGCG	6 cut(s)	536, 547, 549, 596, 806, 890
BspHI	TCATGA	1 cut(s)	981
BspMAI	CTGCAG	1 cut(s)	69
BspPI	GGATC	3 cut(s)	428, 441, 777
BspQI	GCTCTTC	1 cut(s)	66
BspT107I	GGYRCC	1 cut(s)	278
BsrBI	CCGCTC	4 cut(s)	340, 667, 717, 758
BsrDI	GCAATG	2 cut(s)	516, 564
BsrFI	RCCGGY	1 cut(s)	451
BssAI	RCCGGY	1 cut(s)	451
BssECI	CCNNGG	8 cut(s)	129, 143, 333, 736, 827, 910, 930, 970
BssMI	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
BssT1I	CCWWGG	1 cut(s)	970
Bst2UI	CCWGG	4 cut(s)	227, 334, 737, 938
Bst6I	CTCTTC	2 cut(s)	66, 1023
BstC8I	GCNNGC	6 cut(s)	65, 290, 397, 571, 575, 733
BstDEI	CTNAG	2 cut(s)	623, 651
BstDSI	CCRYGG	2 cut(s)	143, 910
BstEII	GGTNACC	1 cut(s)	454
BstF5I	GGATG	1 cut(s)	994
BstFNI	CGCG	6 cut(s)	536, 547, 549, 596, 806, 890
BstHHI	GCGC	4 cut(s)	549, 598, 806, 890
BstKTI	GATC	6 cut(s)	13, 436, 540, 622, 693, 772
BstMBI	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
BstMCI	CGRYCG	3 cut(s)	123, 527, 540
BstMWI	GCNNNNNNNGC	4 cut(s)	73, 87, 154, 520
BstNI	CCWGG	4 cut(s)	227, 334, 737, 938
BstPAI	GACNNNNGTC	1 cut(s)	675
BstPI	GGTNACC	1 cut(s)	454
BstSFI	CTRYAG	1 cut(s)	65
BstSLI	GKGCMC	2 cut(s)	269, 579
BstUI	CGCG	6 cut(s)	536, 547, 549, 596, 806, 890
BstV1I	GCAGC	2 cut(s)	360, 386
BstX2I	RGATCY	2 cut(s)	433, 769
BstYI	RGATCY	2 cut(s)	433, 769
BsuRI	GGCC	8 cut(s)	63, 81, 113, 215, 230, 267, 641, 878
BtgI	CCRYGG	2 cut(s)	143, 910
BtrI	CACGTC	2 cut(s)	463, 486
BtsCI	GGATG	1 cut(s)	994
BtsI	GCAGTG	1 cut(s)	827
BtsIMutI	CAGTG	1 cut(s)	827
BtuMI	TCGCGA	1 cut(s)	536
Cac8I	GCNNGC	6 cut(s)	65, 290, 397, 571, 575, 733
CaiI	CAGNNNCTG	1 cut(s)	248
CciI	TCATGA	1 cut(s)	981
CfoI	GCGC	4 cut(s)	549, 598, 806, 890
Cfr10I	RCCGGY	1 cut(s)	451
Cfr9I	CCCGGG	2 cut(s)	129, 930
CpoI	CGGWCCG	1 cut(s)	895
Csp6I	GTAC	7 cut(s)	106, 199, 361, 445, 472, 721, 955
CspI	CGGWCCG	1 cut(s)	895
CviAII	CATG	2 cut(s)	680, 982
CviQI	GTAC	7 cut(s)	106, 199, 361, 445, 472, 721, 955
DdeI	CTNAG	2 cut(s)	623, 651
DpnI	GATC	6 cut(s)	12, 435, 539, 621, 692, 771
DpnII	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
Eam1104I	CTCTTC	2 cut(s)	66, 1023
EarI	CTCTTC	2 cut(s)	66, 1023
EciI	GGCGGA	1 cut(s)	768
Ecl136II	GAGCTC	1 cut(s)	76
Eco130I	CCWWGG	1 cut(s)	970
Eco24I	GRGCYC	2 cut(s)	78, 269
Eco47I	GGWCC	7 cut(s)	150, 223, 330, 895, 906, 927, 934
Eco53kI	GAGCTC	1 cut(s)	76
Eco57I	CTGAAG	1 cut(s)	1047
Eco88I	CYCGRG	6 cut(s)	47, 83, 129, 773, 923, 930
Eco91I	GGTNACC	1 cut(s)	454
EcoICRI	GAGCTC	1 cut(s)	76
EcoO109I	RGGNCCY	5 cut(s)	266, 330, 906, 927, 934
EcoO65I	GGTNACC	1 cut(s)	454
EcoRI	GAATTC	1 cut(s)	601
EcoRII	CCWGG	4 cut(s)	225, 332, 735, 936
EcoT14I	CCWWGG	1 cut(s)	970
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	78, 269
ErhI	CCWWGG	1 cut(s)	970
FaeI	CATG	2 cut(s)	683, 985
FaiI	YATR	3 cut(s)	6, 681, 983
FaqI	GGGAC	9 cut(s)	29, 343, 517, 644, 683, 710, 739, 913, 919
FatI	CATG	2 cut(s)	679, 981
FauI	CCCGC	9 cut(s)	419, 542, 562, 566, 621, 660, 710, 786, 956
Fnu4HI	GCNGC	4 cut(s)	341, 374, 400, 891
FokI	GGATG	1 cut(s)	1001
FriOI	GRGCYC	2 cut(s)	78, 269
Fsp4HI	GCNGC	4 cut(s)	341, 374, 400, 891
GlaI	GCGC	4 cut(s)	548, 597, 805, 889
GluI	GCNGC	4 cut(s)	341, 374, 400, 891
HaeIII	GGCC	8 cut(s)	63, 81, 113, 215, 230, 267, 641, 878
HapII	CCGG	8 cut(s)	59, 97, 130, 282, 437, 452, 898, 931
HhaI	GCGC	4 cut(s)	549, 598, 806, 890
Hin1II	CATG	2 cut(s)	683, 985
Hin6I	GCGC	4 cut(s)	547, 596, 804, 888
HinP1I	GCGC	4 cut(s)	547, 596, 804, 888
HincII	GTYRAC	1 cut(s)	648
HindII	GTYRAC	1 cut(s)	648
HinfI	GANTC	9 cut(s)	34, 55, 303, 317, 352, 553, 649, 658, 919
HpaII	CCGG	8 cut(s)	59, 97, 130, 282, 437, 452, 898, 931
HphI	GGTGA	7 cut(s)	334, 430, 448, 700, 880, 928, 952
Hpy166II	GTNNAC	6 cut(s)	201, 472, 480, 562, 616, 648
Hpy188I	TCNGA	4 cut(s)	624, 654, 828, 952
Hpy188III	TCNNGA	5 cut(s)	535, 662, 712, 904, 982
Hpy8I	GTNNAC	6 cut(s)	201, 472, 480, 562, 616, 648
Hpy99I	CGWCG	5 cut(s)	445, 464, 487, 520, 584
HpyAV	CCTTC	2 cut(s)	809, 979
HpyCH4IV	ACGT	4 cut(s)	210, 443, 462, 485
HpyCH4V	TGCA	3 cut(s)	4, 67, 242
HpyF10VI	GCNNNNNNNGC	4 cut(s)	73, 87, 154, 520
HpyF3I	CTNAG	2 cut(s)	623, 651
HpySE526I	ACGT	4 cut(s)	210, 443, 462, 485
Hsp92II	CATG	2 cut(s)	683, 985
HspAI	GCGC	4 cut(s)	547, 596, 804, 888
KflI	GGGWCCC	2 cut(s)	906, 927
Kzo9I	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
LguI	GCTCTTC	1 cut(s)	66
LmnI	GCTCC	5 cut(s)	337, 664, 740, 755, 966
Lsp1109I	GCAGC	2 cut(s)	360, 386
MaeII	ACGT	4 cut(s)	210, 443, 462, 485
MaeIII	GTNAC	2 cut(s)	296, 454
MalI	GATC	6 cut(s)	12, 435, 539, 621, 692, 771
MbiI	CCGCTC	4 cut(s)	340, 667, 717, 758
MboI	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
MboII	GAAGA	2 cut(s)	83, 1040
MflI	RGATCY	2 cut(s)	433, 769
MhlI	GDGCHC	3 cut(s)	78, 269, 579
MluCI	AATT	4 cut(s)	14, 254, 601, 1004
MlyI	GAGTC	4 cut(s)	311, 562, 643, 667
MmeI	TCCRAC	2 cut(s)	473, 747
Mph1103I	ATGCAT	1 cut(s)	6
MslI	CAYNNNNRTG	1 cut(s)	461
MspI	CCGG	8 cut(s)	59, 97, 130, 282, 437, 452, 898, 931
MvaI	CCWGG	4 cut(s)	227, 334, 737, 938
MvnI	CGCG	6 cut(s)	536, 547, 549, 596, 806, 890
MwoI	GCNNNNNNNGC	4 cut(s)	73, 87, 154, 520
NciI	CCSGG	7 cut(s)	60, 97, 130, 131, 899, 931, 932
NdeII	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
NlaIII	CATG	2 cut(s)	683, 985
NmeAIII	GCCGAG	5 cut(s)	57, 89, 318, 667, 904
NmuCI	GTSAC	1 cut(s)	454
NruI	TCGCGA	1 cut(s)	536
NsiI	ATGCAT	1 cut(s)	6
OliI	CACNNNNGTG	1 cut(s)	461
PaeR7I	CTCGAG	1 cut(s)	83
PagI	TCATGA	1 cut(s)	981
PciSI	GCTCTTC	1 cut(s)	66
PcsI	WCGNNNNNNNCGW	6 cut(s)	116, 306, 512, 524, 533, 639
PfeI	GAWTC	5 cut(s)	34, 55, 303, 352, 919
PkrI	GCNGC	4 cut(s)	342, 375, 401, 892
Ple19I	CGATCG	1 cut(s)	540
PleI	GAGTC	4 cut(s)	311, 561, 643, 666
PpsI	GAGTC	4 cut(s)	311, 561, 643, 666
PpuMI	RGGWCCY	4 cut(s)	330, 906, 927, 934
PshAI	GACNNNNGTC	1 cut(s)	675
Psp124BI	GAGCTC	1 cut(s)	78
Psp5II	RGGWCCY	4 cut(s)	330, 906, 927, 934
Psp6I	CCWGG	4 cut(s)	225, 332, 735, 936
PspEI	GGTNACC	1 cut(s)	454
PspGI	CCWGG	4 cut(s)	225, 332, 735, 936
PspOMI	GGGCCC	1 cut(s)	265
PspPPI	RGGWCCY	4 cut(s)	330, 906, 927, 934
PspXI	VCTCGAGB	1 cut(s)	83
PstI	CTGCAG	1 cut(s)	69
PstNI	CAGNNNCTG	1 cut(s)	248
PsuI	RGATCY	2 cut(s)	433, 769
PvuI	CGATCG	1 cut(s)	540
RruI	TCGCGA	1 cut(s)	536
RsaI	GTAC	7 cut(s)	107, 200, 362, 446, 473, 722, 956
RsaNI	GTAC	7 cut(s)	106, 199, 361, 445, 472, 721, 955
RseI	CAYNNNNRTG	1 cut(s)	461
Rsr2I	CGGWCCG	1 cut(s)	895
RsrII	CGGWCCG	1 cut(s)	895
SacI	GAGCTC	1 cut(s)	78
SapI	GCTCTTC	1 cut(s)	66
SatI	GCNGC	4 cut(s)	341, 374, 400, 891
Sau3AI	GATC	6 cut(s)	10, 433, 537, 619, 690, 769
SbfI	CCTGCAGG	1 cut(s)	69
SchI	GAGTC	4 cut(s)	311, 562, 643, 667
SdaI	CCTGCAGG	1 cut(s)	69
SduI	GDGCHC	3 cut(s)	78, 269, 579
SfcI	CTRYAG	1 cut(s)	65
Sfr274I	CTCGAG	1 cut(s)	83
SinI	GGWCC	7 cut(s)	150, 223, 330, 895, 906, 927, 934
SlaI	CTCGAG	1 cut(s)	83
SmaI	CCCGGG	2 cut(s)	131, 932
SmiMI	CAYNNNNRTG	1 cut(s)	461
SmlI	CTYRAG	1 cut(s)	83
SmoI	CTYRAG	1 cut(s)	83
Sse8387I	CCTGCAGG	1 cut(s)	69
Sse9I	AATT	4 cut(s)	14, 254, 601, 1004
SstI	GAGCTC	1 cut(s)	78
StyI	CCWWGG	1 cut(s)	970
TaiI	ACGT	4 cut(s)	213, 446, 465, 488
TaqI	TCGA	6 cut(s)	84, 159, 252, 345, 518, 798
TasI	AATT	4 cut(s)	14, 254, 601, 1004
TauI	GCSGC	2 cut(s)	343, 893
TfiI	GAWTC	5 cut(s)	34, 55, 303, 352, 919
TscAI	CASTG	1 cut(s)	827
TseFI	GTSAC	1 cut(s)	454
TseI	GCWGC	2 cut(s)	373, 399
Tsp45I	GTSAC	1 cut(s)	454
TspDTI	ATGAA	2 cut(s)	970, 998
TspGWI	ACGGA	3 cut(s)	93, 132, 315
TspMI	CCCGGG	2 cut(s)	129, 930
TspRI	CASTG	1 cut(s)	827
VpaK11BI	GGWCC	7 cut(s)	150, 223, 330, 895, 906, 927, 934
XapI	RAATTY	1 cut(s)	601
XhoI	CTCGAG	1 cut(s)	83
XmaI	CCCGGG	2 cut(s)	129, 930
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.