Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000235

Physical Location & Seq

Genomic Coordinates Reverse (-)

15027414 .. 15033076

Gene Structure 5663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G008940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGAGGGAGCATCCAAGGAGCCTACCTTCTTCAAGATAATCAAAACTGGGCTTAACACTGATGATCTGAGAATCCCCCCAAAGTTCCGGAGGCACATGCTAAATGAACTTTCTGAAACGGCAAGTTTGGAGTTGAAGGGTTCTTCAAAAGGTTCATGGACTGTTCAAGTGAGTCAAATAGAAAGTGATATATATTTCAAGAATGGATGGCAGAAGTTTATAAAAGATAACTCCTTGGGCGATTTTGAGTTTTTAGTATTTAGGTATGAGAGACCAATGCATTTTACTATAGAGATCTTTGACAAGACGGCATGCAAGAGAAACAATCTTCTGGAAAAATCCACTAGGGCTGACAACACAAAGAGGCCTCGGGGTAGACCAAGAAAGTGCAATCGTTCAGCTGCAGGTGAAAACATTCAAAGTTGCCAGTCCTTTGAACTGAAAGAGATCAAAGAAGAGGAAGAAGAGGAAGCTGCCACATTGCCCAGTTCTGGGTTCCGTTCTTTTACAAGTATTATGGGGAAACACTGTTATAATGTGGCAGTTCCAGTGGACTTCAGTAGGGAGCATCTTCCTCAGGGCTACTACAACATTGTGCTGAAAAATTTGAAGGGACGAAAATGGAAAGTGAAAGTCGTCTGTTCTGTTCCAGTGGACTTTCCGCAGGGTGGGTGGAGTTTAGACGTGCTAATCAAATTAACTGCGGAGATATTTGCACATTTGATCTTGTGGGAAGAAGGACCATGGTGGTTCACGTTATTCCAAATTGATCATTGTTCAGAGAAGCACCAGTCGGTAAAAATGGCAACAAGAACATTTGAGAATGGTGTTGAGGAGAAGAAGGGGCCAACCTTCTGCACATTTTTATCTCCTGGAATCAGCAACGAGATTTTGAAATTCCCACAAAATTTCCAGAAGCATATATTGAATGAGCTCTCAGAGCTGGCTCTTTTGAAGATAAAAGATTCCGAACATTGTTCATGGAACATTAGAGTACATCAAACTGGAAGCTGTATTTATCTGAAGGAAGGATGGAGAGAGTTTTTAGAAGATCACTCAATTGGTGACGGTGAGTTTTTGATAGTCAGATATGATGGACGTATGCAATTCAGTATACAGATATTTGACAAGAACCATGTTGAGAGGGTCGACTTTCCTAATACTGAAACACATGATAAAAATCGAACTTTTGCTAACAATTCAGAGCTCAATGGAGGGGAAGAAGATTACAAACACTATAGAGCTCGGGAAAATGCTAAGCAGTTCAAATCCAAGTTCCCAGCAGTGGCAATCACTATCGGAAACTCTAGTTATTATGCGGGATTTCCCACAGAATGGTGTAGGAAGTATTTACCAGCAAACCGCTACAAATTTTTGCTGAGAAACGCAGAAGATTTAGAGGGAAGAACATGGGAAGTGAATGGTGTTCCTACCAATGATAGGGTCATGTTATCTGCAGGGTGGGCTGCTTTTCTACAGGGTAACCAAGTCAAGAAAGGAGATGTTTGCTGGCTTGAGCTCGAGAGTAAAAGCAAGATGGTGGCTCACATAATTCGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

520

Amino Acids

60.25

Weight (kDa)

8.57

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	10 - 102	5.6e-14	B3 DNA binding domain
B3	PF02362	285 - 378	4.5e-12	B3 DNA binding domain
B3	PF02362	442 - 519	5.2e-09	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000235)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22700 FvH4_2g06920 FvH4_2g06920 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06970 FvH4_2g06970 FvH4_2g07230 FvH4_2g07231 FvH4_2g07231 FvH4_2g07240 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_4g19990 FvH4_4g19990 FvH4_4g19990 FvH4_4g20070
malus_domestica	MD05G1072700.v1.1
prunus_persica	Prupe.8G113100_v2.0.a1
pyrus_communis	pycom05g06500 pycom10g06950
rosa_chinensis	RchiOBHm_Chr4g0425711 RchiOBHm_Chr6g0259241 RchiOBHm_Chr6g0259251 RchiOBHm_Chr6g0259321 RchiOBHm_Chr6g0259331 RchiOBHm_Chr6g0259781 RchiOBHm_Chr6g0259791 RchiOBHm_Chr6g0259811 RchiOBHm_Chr6g0259881 RchiOBHm_Chr6g0259931
rosa_laevigata	RLG00000007345 RLG00000014500 RLG00000014501 RLG00000014505 RLG00000014506 RLG00000014507 RLG00000014539 RLG00000014540 RLG00000014545 RLG00000014546
rosa_multiflora	Rmu_co8137334.1_g000001 Rmu_co8454279.1_g000001 Rmu_co8476373.1_g000001 Rmu_sc0001078.1_g000001 Rmu_sc0003958.1_g000011 Rmu_sc0009049.1_g000001 Rmu_sc0009049.1_g000009 Rmu_sc0010546.1_g000001 Rmu_sc0011974.1_g000002 Rmu_sc0011974.1_g000003 Rmu_sc0033846.1_g000001 Rmu_sc0036999.1_g000001 Rmu_ssc0000052.1_g000015
rosa_roxburghii	Rroxscaffold_5G00367690 Rroxscaffold_7G00206530 Rroxscaffold_7G00206540 Rroxscaffold_7G00206560 Rroxscaffold_7G00206570 Rroxscaffold_7G00207020 Rroxscaffold_7G00207030 Rroxscaffold_7G00207150 Rroxscaffold_7G00207160 Rroxscaffold_7G00207170 Rroxscaffold_7G00207270
rosa_rugosa	Rorug04G0205300 Rorug05G0586300 Rorug05G0586400 Rorug05G0586500 Rorug05G0586600 Rorug05G0586700 Rorug05G0587300 Rorug05G0587400 Rorug05G0587500 Rorug05G0587600 Rorug05G0590500 Rorug05G0590600 Rorug05G0591200 Rorug05G0591300 Rorug05G0591400 Rorug05G0591500
rosa_samantha	Rh4AG262200 Rh4BG268500 Rh4CG279700 Rh4DG264100 Rh6AG103100 Rh6AG103600 Rh6AG107100 Rh6AG107200 Rh6AG107700 Rh6BG095400 Rh6BG095500 Rh6BG095900 Rh6BG096000 Rh6BG096800 Rh6BG102600 Rh6BG102700 Rh6BG102800 Rh6BG103800 Rh6CG092300 Rh6CG092400 Rh6CG092800 Rh6CG092900 Rh6CG096200 Rh6CG096300 Rh6CG096800 Rh6CG097100 Rh6DG086300 Rh6DG086400 Rh6DG086700 Rh6DG086800 Rh6DG090000 Rh6DG090100 Rh6DG090500 Rh6DG090800
rosa_wichuraiana	Rw4G022670 Rw6G008900 Rw6G008940 Rw6G009250 Rw6G009280 Rw6G009330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	221, 534
AarI	CACCTGC	1 cut(s)	395
Acc36I	ACCTGC	1 cut(s)	395
AccB7I	CCANNNNNTGG	1 cut(s)	1335
AccI	GTMKAC	3 cut(s)	376, 1114, 1149
AccIII	TCCGGA	1 cut(s)	87
AciI	CCGC	4 cut(s)	662, 704, 1319, 1363
AcsI	RAATTY	4 cut(s)	604, 896, 907, 1370
AcuI	CTGAAG	2 cut(s)	541, 1043
AfaI	GTAC	1 cut(s)	996
AfiI	CCNNNNNNNGG	6 cut(s)	491, 492, 668, 1285, 1335, 1440
AjiI	CACGTC	1 cut(s)	685
AjnI	CCWGG	1 cut(s)	871
AluBI	AGCT	8 cut(s)	401, 473, 934, 943, 1011, 1207, 1244, 1519
AluI	AGCT	8 cut(s)	401, 473, 934, 943, 1011, 1207, 1244, 1519
Alw21I	GWGCWC	4 cut(s)	936, 1209, 1246, 1521
Alw26I	GTCTC	1 cut(s)	265
Ama87I	CYCGRG	3 cut(s)	369, 1245, 1520
Aor13HI	TCCGGA	1 cut(s)	87
AoxI	GGCC	2 cut(s)	365, 845
ApeKI	GCWGC	3 cut(s)	401, 473, 1466
ApoI	RAATTY	4 cut(s)	604, 896, 907, 1370
Asp700I	GAANNNNTTC	1 cut(s)	414
AspS9I	GGNCC	2 cut(s)	740, 845
AsuHPI	GGTGA	3 cut(s)	419, 1076, 1082
AvaI	CYCGRG	3 cut(s)	369, 1245, 1520
AvaII	GGWCC	1 cut(s)	740
AxyI	CCTNAGG	1 cut(s)	576
BanII	GRGCYC	4 cut(s)	936, 1209, 1246, 1521
Bbv12I	GWGCWC	4 cut(s)	936, 1209, 1246, 1521
BbvI	GCAGC	3 cut(s)	388, 460, 1453
BccI	CCATC	4 cut(s)	201, 1026, 1088, 1531
BceAI	ACGGC	2 cut(s)	135, 324
BciT130I	CCWGG	1 cut(s)	873
BclI	TGATCA	1 cut(s)	769
BcoDI	GTCTC	1 cut(s)	265
BfaI	CTAG	2 cut(s)	345, 1308
BfmI	CTRYAG	5 cut(s)	288, 402, 1237, 1455, 1475
BfuAI	ACCTGC	1 cut(s)	395
BglII	AGATCT	1 cut(s)	294
BisI	GCNGC	3 cut(s)	402, 474, 1467
BlpI	GCTNAGC	1 cut(s)	1257
BlsI	GCNGC	3 cut(s)	403, 475, 1468
Bme1390I	CCNGG	1 cut(s)	873
Bme18I	GGWCC	1 cut(s)	740
BmeT110I	CYCGRG	3 cut(s)	369, 1245, 1520
BmgBI	CACGTC	1 cut(s)	685
BmgT120I	GGNCC	2 cut(s)	740, 845
BmiI	GGNNCC	3 cut(s)	21, 497, 846
BmrFI	CCNGG	1 cut(s)	873
BmrI	ACTGGG	2 cut(s)	57, 480
BmsI	GCATC	2 cut(s)	20, 577
BmuI	ACTGGG	2 cut(s)	57, 480
Bpu1102I	GCTNAGC	1 cut(s)	1257
BpuEI	CTTGAG	1 cut(s)	1535
BsaBI	GATNNNNATC	1 cut(s)	1179
BsaI	GGTCTC	1 cut(s)	265
BsaJI	CCNNGG	4 cut(s)	15, 234, 368, 743
BsaWI	WCCGGW	1 cut(s)	87
Bsc4I	CCNNNNNNNGG	6 cut(s)	491, 492, 668, 1285, 1335, 1440
Bse1I	ACTGG	7 cut(s)	52, 427, 486, 548, 650, 790, 1009
Bse21I	CCTNAGG	1 cut(s)	576
Bse3DI	GCAATG	1 cut(s)	479
Bse8I	GATNNNNATC	1 cut(s)	1179
BseAI	TCCGGA	1 cut(s)	87
BseBI	CCWGG	1 cut(s)	873
BseDI	CCNNGG	4 cut(s)	15, 234, 368, 743
BseGI	GGATG	3 cut(s)	11, 212, 1037
BseJI	GATNNNNATC	1 cut(s)	1179
BseLI	CCNNNNNNNGG	6 cut(s)	491, 492, 668, 1285, 1335, 1440
BseMI	GCAATG	1 cut(s)	479
BseMII	CTCAG	4 cut(s)	59, 590, 951, 1370
BseNI	ACTGG	7 cut(s)	52, 427, 486, 548, 650, 790, 1009
BseRI	GAGGAG	1 cut(s)	848
BseXI	GCAGC	3 cut(s)	388, 460, 1453
BseYI	CCCAGC	1 cut(s)	1279
BsgI	GTGCAG	1 cut(s)	841
BshFI	GGCC	2 cut(s)	367, 847
BsiHKAI	GWGCWC	4 cut(s)	936, 1209, 1246, 1521
BsiHKCI	CYCGRG	3 cut(s)	369, 1245, 1520
BsiSI	CCGG	1 cut(s)	88
BslFI	GGGAC	1 cut(s)	627
BslI	CCNNNNNNNGG	6 cut(s)	491, 492, 668, 1285, 1335, 1440
BsmAI	GTCTC	1 cut(s)	265
BsmFI	GGGAC	1 cut(s)	627
BsnI	GGCC	2 cut(s)	367, 847
Bso31I	GGTCTC	1 cut(s)	265
BsoBI	CYCGRG	3 cut(s)	369, 1245, 1520
Bsp1286I	GDGCHC	4 cut(s)	936, 1209, 1246, 1521
Bsp13I	TCCGGA	1 cut(s)	87
Bsp143I	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
Bsp1720I	GCTNAGC	1 cut(s)	1257
Bsp19I	CCATGG	1 cut(s)	743
BspACI	CCGC	4 cut(s)	662, 704, 1319, 1363
BspANI	GGCC	2 cut(s)	367, 847
BspCNI	CTCAG	4 cut(s)	60, 589, 950, 1371
BspEI	TCCGGA	1 cut(s)	87
BspLI	GGNNCC	3 cut(s)	21, 497, 846
BspMAI	CTGCAG	2 cut(s)	406, 1459
BspMI	ACCTGC	1 cut(s)	395
BspTNI	GGTCTC	1 cut(s)	265
BsrDI	GCAATG	1 cut(s)	479
BsrI	ACTGG	7 cut(s)	52, 427, 486, 548, 650, 790, 1009
BssECI	CCNNGG	4 cut(s)	15, 234, 368, 743
BssMI	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
BssNAI	GTATAC	1 cut(s)	1115
BssT1I	CCWWGG	3 cut(s)	15, 234, 743
Bst1107I	GTATAC	1 cut(s)	1115
Bst2UI	CCWGG	1 cut(s)	873
Bst4CI	ACNGT	3 cut(s)	163, 530, 1070
Bst6I	CTCTTC	2 cut(s)	450, 459
BstC8I	GCNNGC	3 cut(s)	313, 945, 1511
BstDEI	CTNAG	5 cut(s)	68, 576, 937, 1257, 1379
BstDSI	CCRYGG	1 cut(s)	743
BstEII	GGTNACC	1 cut(s)	1481
BstF5I	GGATG	3 cut(s)	11, 212, 1037
BstKTI	GATC	6 cut(s)	67, 297, 450, 726, 772, 1054
BstMAI	GTCTC	1 cut(s)	265
BstMBI	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
BstMWI	GCNNNNNNNGC	2 cut(s)	940, 1463
BstNI	CCWGG	1 cut(s)	873
BstNSI	RCATGY	2 cut(s)	100, 315
BstPI	GGTNACC	1 cut(s)	1481
BstSCI	CCNGG	1 cut(s)	871
BstSFI	CTRYAG	5 cut(s)	288, 402, 1237, 1455, 1475
BstV1I	GCAGC	3 cut(s)	388, 460, 1453
BstX2I	RGATCY	1 cut(s)	294
BstYI	RGATCY	1 cut(s)	294
BstZ17I	GTATAC	1 cut(s)	1115
Bsu36I	CCTNAGG	1 cut(s)	576
BsuRI	GGCC	2 cut(s)	367, 847
BtgI	CCRYGG	1 cut(s)	743
BtrI	CACGTC	1 cut(s)	685
BtsCI	GGATG	3 cut(s)	11, 212, 1037
BtsI	GCAGTG	1 cut(s)	1290
BtsIMutI	CAGTG	5 cut(s)	57, 526, 555, 657, 1290
BveI	ACCTGC	1 cut(s)	395
Cac8I	GCNNGC	3 cut(s)	313, 945, 1511
Cfr13I	GGNCC	2 cut(s)	740, 845
Csp6I	GTAC	1 cut(s)	995
CviAII	CATG	9 cut(s)	97, 156, 312, 744, 981, 1136, 1172, 1410, 1447
CviQI	GTAC	1 cut(s)	995
DdeI	CTNAG	5 cut(s)	68, 576, 937, 1257, 1379
DpnI	GATC	6 cut(s)	66, 296, 449, 725, 771, 1053
DpnII	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
Eam1104I	CTCTTC	2 cut(s)	450, 459
EarI	CTCTTC	2 cut(s)	450, 459
Ecl136II	GAGCTC	4 cut(s)	934, 1207, 1244, 1519
Eco130I	CCWWGG	3 cut(s)	15, 234, 743
Eco147I	AGGCCT	1 cut(s)	367
Eco24I	GRGCYC	4 cut(s)	936, 1209, 1246, 1521
Eco31I	GGTCTC	1 cut(s)	265
Eco47I	GGWCC	1 cut(s)	740
Eco53kI	GAGCTC	4 cut(s)	934, 1207, 1244, 1519
Eco57I	CTGAAG	2 cut(s)	541, 1043
Eco81I	CCTNAGG	1 cut(s)	576
Eco88I	CYCGRG	3 cut(s)	369, 1245, 1520
Eco91I	GGTNACC	1 cut(s)	1481
EcoICRI	GAGCTC	4 cut(s)	934, 1207, 1244, 1519
EcoO65I	GGTNACC	1 cut(s)	1481
EcoRII	CCWGG	1 cut(s)	871
EcoT14I	CCWWGG	3 cut(s)	15, 234, 743
EcoT22I	ATGCAT	1 cut(s)	282
EcoT38I	GRGCYC	4 cut(s)	936, 1209, 1246, 1521
ErhI	CCWWGG	3 cut(s)	15, 234, 743
FaeI	CATG	9 cut(s)	100, 159, 315, 747, 984, 1139, 1175, 1413, 1450
FaqI	GGGAC	1 cut(s)	627
FatI	CATG	9 cut(s)	96, 155, 311, 743, 980, 1135, 1171, 1409, 1446
FauI	CCCGC	1 cut(s)	1312
FbaI	TGATCA	1 cut(s)	769
FblI	GTMKAC	3 cut(s)	376, 1114, 1149
Fnu4HI	GCNGC	3 cut(s)	402, 474, 1467
FokI	GGATG	2 cut(s)	219, 1044
FriOI	GRGCYC	4 cut(s)	936, 1209, 1246, 1521
Fsp4HI	GCNGC	3 cut(s)	402, 474, 1467
FspBI	CTAG	2 cut(s)	345, 1308
GluI	GCNGC	3 cut(s)	402, 474, 1467
GsaI	CCCAGC	1 cut(s)	1283
HaeIII	GGCC	2 cut(s)	367, 847
HapII	CCGG	1 cut(s)	88
Hin1II	CATG	9 cut(s)	100, 159, 315, 747, 984, 1139, 1175, 1413, 1450
HincII	GTYRAC	1 cut(s)	1150
HindII	GTYRAC	1 cut(s)	1150
HinfI	GANTC	4 cut(s)	72, 172, 876, 965
HpaII	CCGG	1 cut(s)	88
HphI	GGTGA	3 cut(s)	419, 1076, 1082
Hpy166II	GTNNAC	6 cut(s)	377, 553, 655, 753, 1115, 1150
Hpy188III	TCNNGA	8 cut(s)	34, 88, 199, 332, 913, 1247, 1492, 1522
Hpy8I	GTNNAC	6 cut(s)	377, 553, 655, 753, 1115, 1150
HpyAV	CCTTC	8 cut(s)	37, 130, 604, 731, 835, 862, 1018, 1022
HpyCH4III	ACNGT	3 cut(s)	163, 530, 1070
HpyCH4IV	ACGT	3 cut(s)	684, 755, 1099
HpyCH4V	TGCA	8 cut(s)	280, 315, 390, 404, 716, 858, 1105, 1457
HpyF10VI	GCNNNNNNNGC	2 cut(s)	940, 1463
HpyF3I	CTNAG	5 cut(s)	68, 576, 937, 1257, 1379
HpySE526I	ACGT	3 cut(s)	684, 755, 1099
Hsp92II	CATG	9 cut(s)	100, 159, 315, 747, 984, 1139, 1175, 1413, 1450
Kpn2I	TCCGGA	1 cut(s)	87
Ksp22I	TGATCA	1 cut(s)	769
Kzo9I	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
LmnI	GCTCC	3 cut(s)	8, 19, 565
Lsp1109I	GCAGC	3 cut(s)	388, 460, 1453
LweI	GCATC	2 cut(s)	20, 577
MaeI	CTAG	2 cut(s)	345, 1308
MaeII	ACGT	3 cut(s)	684, 755, 1099
MaeIII	GTNAC	2 cut(s)	1064, 1481
MalI	GATC	6 cut(s)	66, 296, 449, 725, 771, 1053
MboI	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
MfeI	CAATTG	1 cut(s)	1059
MflI	RGATCY	1 cut(s)	294
MhlI	GDGCHC	4 cut(s)	936, 1209, 1246, 1521
MlyI	GAGTC	1 cut(s)	181
Mph1103I	ATGCAT	1 cut(s)	282
MroI	TCCGGA	1 cut(s)	87
MroXI	GAANNNNTTC	1 cut(s)	414
MseI	TTAA	2 cut(s)	54, 698
MspA1I	CMGCKG	1 cut(s)	401
MspI	CCGG	1 cut(s)	88
MspR9I	CCNGG	1 cut(s)	873
MunI	CAATTG	1 cut(s)	1059
MvaI	CCWGG	1 cut(s)	873
MwoI	GCNNNNNNNGC	2 cut(s)	940, 1463
NcoI	CCATGG	1 cut(s)	743
NdeII	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
NlaIII	CATG	9 cut(s)	100, 159, 315, 747, 984, 1139, 1175, 1413, 1450
NlaIV	GGNNCC	3 cut(s)	21, 497, 846
NmuCI	GTSAC	1 cut(s)	1064
NsiI	ATGCAT	1 cut(s)	282
NspI	RCATGY	2 cut(s)	100, 315
PaeI	GCATGC	1 cut(s)	315
PaeR7I	CTCGAG	1 cut(s)	1520
PaqCI	CACCTGC	1 cut(s)	395
PceI	AGGCCT	1 cut(s)	367
PdmI	GAANNNNTTC	1 cut(s)	414
PfeI	GAWTC	3 cut(s)	72, 876, 965
PflMI	CCANNNNNTGG	1 cut(s)	1335
PfoI	TCCNGGA	1 cut(s)	871
PkrI	GCNGC	3 cut(s)	403, 475, 1468
PleI	GAGTC	1 cut(s)	180
PpsI	GAGTC	1 cut(s)	180
PsiI	TTATAA	2 cut(s)	221, 534
Psp124BI	GAGCTC	4 cut(s)	936, 1209, 1246, 1521
Psp6I	CCWGG	1 cut(s)	871
PspEI	GGTNACC	1 cut(s)	1481
PspFI	CCCAGC	1 cut(s)	1279
PspGI	CCWGG	1 cut(s)	871
PspN4I	GGNNCC	3 cut(s)	21, 497, 846
PspPI	GGNCC	2 cut(s)	740, 845
PstI	CTGCAG	2 cut(s)	406, 1459
PsuI	RGATCY	1 cut(s)	294
PvuII	CAGCTG	1 cut(s)	401
RsaI	GTAC	1 cut(s)	996
RsaNI	GTAC	1 cut(s)	995
SacI	GAGCTC	4 cut(s)	936, 1209, 1246, 1521
SalI	GTCGAC	1 cut(s)	1148
SaqAI	TTAA	2 cut(s)	54, 698
SatI	GCNGC	3 cut(s)	402, 474, 1467
Sau3AI	GATC	6 cut(s)	64, 294, 447, 723, 769, 1051
Sau96I	GGNCC	2 cut(s)	740, 845
SchI	GAGTC	1 cut(s)	181
ScrFI	CCNGG	1 cut(s)	873
SduI	GDGCHC	4 cut(s)	936, 1209, 1246, 1521
SfaNI	GCATC	2 cut(s)	20, 577
SfcI	CTRYAG	5 cut(s)	288, 402, 1237, 1455, 1475
Sfr274I	CTCGAG	1 cut(s)	1520
SinI	GGWCC	1 cut(s)	740
SlaI	CTCGAG	1 cut(s)	1520
SmlI	CTYRAG	2 cut(s)	1514, 1520
SmoI	CTYRAG	2 cut(s)	1514, 1520
SphI	GCATGC	1 cut(s)	315
SseBI	AGGCCT	1 cut(s)	367
SsiI	CCGC	4 cut(s)	662, 704, 1319, 1363
SspMI	CTAG	2 cut(s)	345, 1308
SstI	GAGCTC	4 cut(s)	936, 1209, 1246, 1521
StuI	AGGCCT	1 cut(s)	367
StyD4I	CCNGG	1 cut(s)	871
StyI	CCWWGG	3 cut(s)	15, 234, 743
TaaI	ACNGT	3 cut(s)	163, 530, 1070
TaiI	ACGT	3 cut(s)	687, 758, 1102
TaqI	TCGA	3 cut(s)	1149, 1183, 1521
TatI	WGTACW	1 cut(s)	994
TfiI	GAWTC	3 cut(s)	72, 876, 965
Tru1I	TTAA	2 cut(s)	54, 698
Tru9I	TTAA	2 cut(s)	54, 698
TscAI	CASTG	5 cut(s)	64, 533, 555, 657, 1290
TseFI	GTSAC	1 cut(s)	1064
TseI	GCWGC	3 cut(s)	401, 473, 1466
Tsp45I	GTSAC	1 cut(s)	1064
TspDTI	ATGAA	3 cut(s)	120, 144, 969
TspGWI	ACGGA	1 cut(s)	488
TspRI	CASTG	5 cut(s)	64, 533, 555, 657, 1290
Van91I	CCANNNNNTGG	1 cut(s)	1335
VpaK11BI	GGWCC	1 cut(s)	740
XapI	RAATTY	4 cut(s)	604, 896, 907, 1370
XceI	RCATGY	2 cut(s)	100, 315
XhoI	CTCGAG	1 cut(s)	1520
XmiI	GTMKAC	3 cut(s)	376, 1114, 1149
XmnI	GAANNNNTTC	1 cut(s)	414
XspI	CTAG	2 cut(s)	345, 1308
Zsp2I	ATGCAT	1 cut(s)	282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.