Rorug05G0591200

B3 domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
78908972 .. 78916049
7078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0591200.1

Sequence Viewer

Length: 2202 bp
ATGAGGGGAAGGAGTTACAGTCCATCACCACCACCAAGGGGATATGGTAGGAGAGGACGGAGTCCTAGCCCAAGGGGTCGTTATGGTGGTCATAGTAGAGATAGAGATCTTCCTACAAGCCTCCTAGTTCGTAACCTTCGCCATGATTGCAGGCCAGATGATCTTCGCCGTCCATTTGGGCAGTTTGGTCCTCTGAAGGACATTTACCTGCCAAAGGATTATTATTCAGGGCAACCTCGTGGTTTCGGTTTTGTCCAATTTGTTGATCCTACTGATGCTGCGGAGGCTAAATATCAAATGGATGGTCACGTTCTTCTTGGTCGCGAGGTAACTGTTGTATTTGCAGAGGAGAACAGGAAGAAGCCGTCTGATATGAGGCAAAGGGAGGGTCCAAGCTCCAGGGGTAGTGGTCGACATCGTGATCGAAGAGGGTCTCCTCCACGCTATTCACGCTCTCCACCTCCACGTCATGCAAGATCTCGGCCCCGCAGCCCTTCTTATGATTCCCCTCCCCCAAAAAGAAGGGAATATTCGAGATCTTTCTCACCCCCAGGGAGAAGGTACAGTAGAGAGAGATCGTTTTCCCGATCTCCTCCTCAACCATATAATGGCTCAAGGGGCCGCAGTCAGAGTCCGGTTAGGGGTCCAAGCCGGAGCAGAAGCCAGAGTCCAAGGCAAATTGGTAGAAGCTTGAGTGGCAGGCCACAAAGTCCTGATCATGAAGATTACTCAAGGGAACCAAATGGAGACAGATCAGGAGTTACGAGCTATAGGCACAGCACTGGAGGTGCATTCGTAGGGGTAAACATTGGTACTGATGTTTCAGACCTTCCATCTGGGACTGAAATGGTTGCGATCCTTATAGCCCATCAAATTACACATGTTCGCCTTTATGATGCTGATGCTCACATGCTGAGGGCCCTTTCAAACAGTGGTATTGAAGTAGTGGTAGGTATTACAAATGAGGAGGTCCTAGGGATTGGAGAGTCTCCATCAGTAGCAGCAGCCTGGGTTAATAAAAATGTCGCACCTTACTTACCTTCCACCAACATTACAGCCATTGCTGTTGGCAGTGAGGTTCTTACCCAAATTCCTCATGCTTCGCCAGTTTTGGTTTCTGCTATGAATTACATTCACAAAGCCCTGGTTGCTACAAACTTAAACTTCCAGGTCAAAGTTTCAACTCCACAATCCATGGATGTAATCCCTAAGGCTTTCCCCCCCTCCACTGCTACCTTTGATCCATCATGGAACTCTACAGTTTTCCAAATCCTTCAGTTTTTGAAAAACACAAATTCCTATTACATGTTAAATGCATATCCTTATTATGGTTACACCAAGGGTGACGGAATTTTCCCGATTGATTATGCTCTTTTTCAACCACTTCCTTCTGTCAAGCAGATTGTTGATCCAAACACTTTATCCCACTATAACAGCATGTTTGATGCTATGGTTGATGCTACCTATTATTCTATAGAGGCCCTCAATTTTACTGGGATTTCTGTTGTTGTTACGGAGAGTGGTTGGCCATCGTTGGGTGGATCCAATGAACCTGATGCGAATGTGGAAAATGCTCAGACATACACAAACAACTTGATTCGGCGAGTTTTGAATGATTCGGGTCCACCAAGCAAGCCAACTTTTCCTATCAACACTTACATTTATGAGTTGTTCAATGAAGATAAGAGGCCAGGGCCAGTGTCAGAGAAAAATTGGGGCGTGCTCTTCACTAATGGGTCTACTGTTTATCCTTTTACTTTGGGTACTTCCACTCCAACTGGAAATTCTTCAGGGTCGTTCTGTGTGGCGAAAACTGATGCTGATCCTGATAAGTTGCAAGATGGCTTAAACTGGGCTTGTGGGCAAGGCCAAGCTGATTGCACTCCCATTCAACAAGGGCATGGGTGTTTTCTTCCCAATACACTTGTAAATCATGCTTCATATGCTTATAATGATTACTATCAAAGAATGCAGAGTGTTGGTGGAACATGCGACTTTGATGGCACGGCTAAGACAACTACTGTTGATCCCAGTAATGGATCTTGCAAATTTGCAAGTTCTAATTCAAGTACAACCGGGGCACTTACACCAATCTCGGCGACTGCACCTTCAAGCCCTGTTGGAGGCTGGAGTTCAAATCTGAAAGTCTCCCAACTGCAGTATCTCATACCAGCCGCTTTTCTTCCTTTGTTATTGTTTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

733

Amino Acids

80.38

Weight (kDa)

9.33

Isoelectric Point (pI)

61.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 41 - 110 6.5e-18 RNA recognition motif
Glyco_hydro_17 PF00332 266 - 583 4.5e-73 Glycosyl hydrolases family 17
X8 PF07983 600 - 670 4.3e-20 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000235)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22700 FvH4_2g06920 FvH4_2g06920 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06960 FvH4_2g06970 FvH4_2g06970 FvH4_2g07230 FvH4_2g07231 FvH4_2g07231 FvH4_2g07240 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07290 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_2g07300 FvH4_4g19990 FvH4_4g19990 FvH4_4g19990 FvH4_4g20070
malus_domestica MD05G1072700.v1.1
prunus_persica Prupe.8G113100_v2.0.a1
pyrus_communis pycom05g06500 pycom10g06950
rosa_chinensis RchiOBHm_Chr4g0425711 RchiOBHm_Chr6g0259241 RchiOBHm_Chr6g0259251 RchiOBHm_Chr6g0259321 RchiOBHm_Chr6g0259331 RchiOBHm_Chr6g0259781 RchiOBHm_Chr6g0259791 RchiOBHm_Chr6g0259811 RchiOBHm_Chr6g0259881 RchiOBHm_Chr6g0259931
rosa_laevigata RLG00000007345 RLG00000014500 RLG00000014501 RLG00000014505 RLG00000014506 RLG00000014507 RLG00000014539 RLG00000014540 RLG00000014545 RLG00000014546
rosa_multiflora Rmu_co8137334.1_g000001 Rmu_co8454279.1_g000001 Rmu_co8476373.1_g000001 Rmu_sc0001078.1_g000001 Rmu_sc0003958.1_g000011 Rmu_sc0009049.1_g000001 Rmu_sc0009049.1_g000009 Rmu_sc0010546.1_g000001 Rmu_sc0011974.1_g000002 Rmu_sc0011974.1_g000003 Rmu_sc0033846.1_g000001 Rmu_sc0036999.1_g000001 Rmu_ssc0000052.1_g000015
rosa_roxburghii Rroxscaffold_5G00367690 Rroxscaffold_7G00206530 Rroxscaffold_7G00206540 Rroxscaffold_7G00206560 Rroxscaffold_7G00206570 Rroxscaffold_7G00207020 Rroxscaffold_7G00207030 Rroxscaffold_7G00207150 Rroxscaffold_7G00207160 Rroxscaffold_7G00207170 Rroxscaffold_7G00207270
rosa_rugosa Rorug04G0205300 Rorug05G0586300 Rorug05G0586400 Rorug05G0586500 Rorug05G0586600 Rorug05G0586700 Rorug05G0587300 Rorug05G0587400 Rorug05G0587500 Rorug05G0587600 Rorug05G0590500 Rorug05G0590600 Rorug05G0591200 Rorug05G0591300 Rorug05G0591400 Rorug05G0591500
rosa_samantha Rh4AG262200 Rh4BG268500 Rh4CG279700 Rh4DG264100 Rh6AG103100 Rh6AG103600 Rh6AG107100 Rh6AG107200 Rh6AG107700 Rh6BG095400 Rh6BG095500 Rh6BG095900 Rh6BG096000 Rh6BG096800 Rh6BG102600 Rh6BG102700 Rh6BG102800 Rh6BG103800 Rh6CG092300 Rh6CG092400 Rh6CG092800 Rh6CG092900 Rh6CG096200 Rh6CG096300 Rh6CG096800 Rh6CG097100 Rh6DG086300 Rh6DG086400 Rh6DG086700 Rh6DG086800 Rh6DG090000 Rh6DG090100 Rh6DG090500 Rh6DG090800
rosa_wichuraiana Rw4G022670 Rw6G008900 Rw6G008940 Rw6G009250 Rw6G009280 Rw6G009330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1950
Acc36I ACCTGC 1 cut(s) 216
AccB7I CCANNNNNTGG 1 cut(s) 608
AccI GTMKAC 2 cut(s) 412, 1739
AccII CGCG 1 cut(s) 324
AciI CCGC 4 cut(s) 281, 487, 622, 2175
AclWI GGATC 9 cut(s) 260, 850, 1235, 1403, 1536, 1549, 1817, 2021, 2047
AcoI YGGCCR 1 cut(s) 1526
AcsI RAATTY 5 cut(s) 1089, 1294, 1350, 1783, 2048
AcuI CTGAAG 3 cut(s) 215, 1259, 1773
AfaI GTAC 4 cut(s) 563, 814, 1765, 2071
AfiI CCNNNNNNNGG 8 cut(s) 38, 214, 608, 641, 1328, 1535, 2036, 2123
AflIII ACRYGT 2 cut(s) 880, 1305
AjiI CACGTC 1 cut(s) 467
AjnI CCWGG 6 cut(s) 398, 550, 1007, 1143, 1167, 1690
AjuI GAANNNNNNNTTGG 2 cut(s) 1768, 1800
AluBI AGCT 4 cut(s) 396, 690, 768, 1874
AluI AGCT 4 cut(s) 396, 690, 768, 1874
Alw21I GWGCWC 1 cut(s) 1725
Alw26I GTCTC 4 cut(s) 438, 741, 993, 2152
AlwI GGATC 9 cut(s) 260, 850, 1235, 1403, 1536, 1549, 1817, 2021, 2047
ApaI GGGCCC 1 cut(s) 922
ApeKI GCWGC 4 cut(s) 278, 489, 1001, 1004
ApoI RAATTY 5 cut(s) 1089, 1294, 1350, 1783, 2048
ArsI GACNNNNNNTTYG 4 cut(s) 289, 321, 373, 405
Asp700I GAANNNNTTC 1 cut(s) 1786
AspA2I CCTAGG 1 cut(s) 973
AsuC2I CCSGG 1 cut(s) 2077
AsuHPI GGTGA 3 cut(s) 18, 537, 1355
AvaII GGWCC 5 cut(s) 188, 389, 644, 970, 1622
AvrII CCTAGG 1 cut(s) 973
AxyI CCTNAGG 1 cut(s) 1209
BaeGI GKGCMC 2 cut(s) 922, 2083
BaeI ACNNNNGTAYC 4 cut(s) 804, 837, 2144, 2177
BalI TGGCCA 1 cut(s) 1528
BamHI GGATCC 1 cut(s) 1541
BanII GRGCYC 1 cut(s) 922
BarI GAAGNNNNNNTAC 2 cut(s) 188, 220
BauI CACGAG 1 cut(s) 237
Bbv12I GWGCWC 1 cut(s) 1725
BbvCI CCTCAGC 1 cut(s) 914
BbvI GCAGC 4 cut(s) 265, 501, 1013, 1016
BccI CCATC 9 cut(s) 31, 296, 841, 876, 1000, 1252, 1537, 1835, 1994
BceAI ACGGC 3 cut(s) 153, 349, 2022
BciT130I CCWGG 6 cut(s) 400, 552, 1009, 1145, 1169, 1692
BclI TGATCA 1 cut(s) 715
BcnI CCSGG 1 cut(s) 2077
BcoDI GTCTC 4 cut(s) 438, 741, 993, 2152
BfaI CTAG 3 cut(s) 66, 125, 974
BfmI CTRYAG 4 cut(s) 769, 1257, 1473, 2156
BfuAI ACCTGC 1 cut(s) 216
BglII AGATCT 3 cut(s) 106, 476, 536
BisI GCNGC 6 cut(s) 279, 490, 622, 1002, 1005, 2175
BlnI CCTAGG 1 cut(s) 973
BlsI GCNGC 6 cut(s) 280, 491, 623, 1003, 1006, 2176
Bme1390I CCNGG 7 cut(s) 400, 552, 1009, 1145, 1169, 1692, 2077
Bme18I GGWCC 5 cut(s) 188, 389, 644, 970, 1622
BmgBI CACGTC 1 cut(s) 467
BmiI GGNNCC 8 cut(s) 390, 485, 620, 645, 738, 920, 1543, 1623
BmrFI CCNGG 7 cut(s) 400, 552, 1009, 1145, 1169, 1692, 2077
BmrI ACTGGG 3 cut(s) 1503, 1861, 2025
BmsI GCATC 7 cut(s) 265, 886, 892, 1435, 1447, 1546, 1807
BmuI ACTGGG 3 cut(s) 1503, 1861, 2025
BpmI CTGGAG 3 cut(s) 382, 804, 2149
Bpu10I CCTNAGC 1 cut(s) 914
BpuEI CTTGAG 3 cut(s) 598, 712, 715
BpuMI CCSGG 1 cut(s) 2077
BsaBI GATNNNNATC 3 cut(s) 105, 1821, 1959
BsaI GGTCTC 1 cut(s) 438
BsaWI WCCGGW 1 cut(s) 634
BsaXI ACNNNNNCTCC 3 cut(s) 34, 1756, 1786
Bsc4I CCNNNNNNNGG 8 cut(s) 38, 214, 608, 641, 1328, 1535, 2036, 2123
Bse1I ACTGG 7 cut(s) 787, 1106, 1498, 1697, 1783, 1856, 2031
Bse21I CCTNAGG 1 cut(s) 1209
Bse3DI GCAATG 1 cut(s) 1059
Bse8I GATNNNNATC 3 cut(s) 105, 1821, 1959
BseBI CCWGG 6 cut(s) 400, 552, 1009, 1145, 1169, 1692
BseGI GGATG 2 cut(s) 307, 1204
BseJI GATNNNNATC 3 cut(s) 105, 1821, 1959
BseLI CCNNNNNNNGG 8 cut(s) 38, 214, 608, 641, 1328, 1535, 2036, 2123
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 2 cut(s) 905, 1589
BseNI ACTGG 7 cut(s) 787, 1106, 1498, 1697, 1783, 1856, 2031
BseRI GAGGAG 5 cut(s) 362, 426, 582, 585, 980
BseSI GKGCMC 2 cut(s) 922, 2083
BseXI GCAGC 4 cut(s) 265, 501, 1013, 1016
BsgI GTGCAG 1 cut(s) 2088
Bsh1236I CGCG 1 cut(s) 324
BsiHKAI GWGCWC 1 cut(s) 1725
BsiSI CCGG 3 cut(s) 635, 652, 2076
BslFI GGGAC 1 cut(s) 853
BslI CCNNNNNNNGG 8 cut(s) 38, 214, 608, 641, 1328, 1535, 2036, 2123
BsmAI GTCTC 4 cut(s) 438, 741, 993, 2152
BsmFI GGGAC 1 cut(s) 853
BsmI GAATGC 2 cut(s) 791, 1974
Bso31I GGTCTC 1 cut(s) 438
Bsp120I GGGCCC 1 cut(s) 918
Bsp1286I GDGCHC 3 cut(s) 922, 1725, 2083
Bsp19I CCATGG 1 cut(s) 1194
Bsp68I TCGCGA 1 cut(s) 324
BspACI CCGC 4 cut(s) 281, 487, 622, 2175
BspCNI CTCAG 2 cut(s) 906, 1588
BspFNI CGCG 1 cut(s) 324
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 8 cut(s) 390, 485, 620, 645, 738, 920, 1543, 1623
BspMAI CTGCAG 1 cut(s) 2160
BspMI ACCTGC 1 cut(s) 216
BspPI GGATC 9 cut(s) 260, 850, 1235, 1403, 1536, 1549, 1817, 2021, 2047
BspQI GCTCTTC 1 cut(s) 1730
BspTNI GGTCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 1059
BsrI ACTGG 7 cut(s) 787, 1106, 1498, 1697, 1783, 1856, 2031
BssSI CACGAG 1 cut(s) 237
BssT1I CCWWGG 6 cut(s) 35, 71, 671, 973, 1194, 1338
Bst2BI CACGAG 1 cut(s) 237
Bst2UI CCWGG 6 cut(s) 400, 552, 1009, 1145, 1169, 1692
Bst4CI ACNGT 7 cut(s) 20, 334, 566, 932, 1261, 1744, 2023
Bst6I CTCTTC 2 cut(s) 421, 1730
BstC8I GCNNGC 4 cut(s) 152, 701, 1634, 1721
BstDEI CTNAG 4 cut(s) 914, 1209, 1575, 2010
BstDSI CCRYGG 1 cut(s) 1194
BstENI CCTNNNNNAGG 2 cut(s) 212, 2121
BstF5I GGATG 2 cut(s) 307, 1204
BstFNI CGCG 1 cut(s) 324
BstMAI GTCTC 4 cut(s) 438, 741, 993, 2152
BstMWI GCNNNNNNNGC 7 cut(s) 147, 284, 450, 618, 696, 1148, 1943
BstNI CCWGG 6 cut(s) 400, 552, 1009, 1145, 1169, 1692
BstNSI RCATGY 5 cut(s) 884, 913, 1309, 1441, 1992
BstSCI CCNGG 7 cut(s) 398, 550, 1007, 1143, 1167, 1690, 2075
BstSFI CTRYAG 4 cut(s) 769, 1257, 1473, 2156
BstSLI GKGCMC 2 cut(s) 922, 2083
BstUI CGCG 1 cut(s) 324
BstV1I GCAGC 4 cut(s) 265, 501, 1013, 1016
BstX2I RGATCY 5 cut(s) 106, 476, 536, 1541, 2039
BstYI RGATCY 5 cut(s) 106, 476, 536, 1541, 2039
Bsu36I CCTNAGG 1 cut(s) 1209
BtgI CCRYGG 1 cut(s) 1194
BtrI CACGTC 1 cut(s) 467
BtsCI GGATG 2 cut(s) 307, 1204
BtsI GCAGTG 2 cut(s) 1078, 1227
BtsIMutI CAGTG 5 cut(s) 780, 937, 1078, 1227, 1704
BtuMI TCGCGA 1 cut(s) 324
BveI ACCTGC 1 cut(s) 216
Cac8I GCNNGC 4 cut(s) 152, 701, 1634, 1721
CciI TCATGA 1 cut(s) 718
Csp6I GTAC 4 cut(s) 562, 813, 1764, 2070
CviQI GTAC 4 cut(s) 562, 813, 1764, 2070
DdeI CTNAG 4 cut(s) 914, 1209, 1575, 2010
EaeI YGGCCR 1 cut(s) 1526
Eam1104I CTCTTC 2 cut(s) 421, 1730
EarI CTCTTC 2 cut(s) 421, 1730
Eco130I CCWWGG 6 cut(s) 35, 71, 671, 973, 1194, 1338
Eco24I GRGCYC 1 cut(s) 922
Eco31I GGTCTC 1 cut(s) 438
Eco47I GGWCC 5 cut(s) 188, 389, 644, 970, 1622
Eco57I CTGAAG 3 cut(s) 215, 1259, 1773
Eco81I CCTNAGG 1 cut(s) 1209
EcoNI CCTNNNNNAGG 2 cut(s) 212, 2121
EcoO109I RGGNCCY 4 cut(s) 918, 919, 970, 1480
EcoRII CCWGG 6 cut(s) 398, 550, 1007, 1143, 1167, 1690
EcoT14I CCWWGG 6 cut(s) 35, 71, 671, 973, 1194, 1338
EcoT22I ATGCAT 1 cut(s) 1318
EcoT38I GRGCYC 1 cut(s) 922
ErhI CCWWGG 6 cut(s) 35, 71, 671, 973, 1194, 1338
FaqI GGGAC 1 cut(s) 853
FauI CCCGC 1 cut(s) 494
FauNDI CATATG 1 cut(s) 1942
FbaI TGATCA 1 cut(s) 715
FblI GTMKAC 2 cut(s) 412, 1739
Fnu4HI GCNGC 6 cut(s) 279, 490, 622, 1002, 1005, 2175
FokI GGATG 2 cut(s) 314, 1211
FriOI GRGCYC 1 cut(s) 922
Fsp4HI GCNGC 6 cut(s) 279, 490, 622, 1002, 1005, 2175
FspBI CTAG 3 cut(s) 66, 125, 974
GluI GCNGC 6 cut(s) 279, 490, 622, 1002, 1005, 2175
GsuI CTGGAG 3 cut(s) 382, 804, 2149
HapII CCGG 3 cut(s) 635, 652, 2076
HincII GTYRAC 1 cut(s) 413
HindII GTYRAC 1 cut(s) 413
HindIII AAGCTT 1 cut(s) 688
HinfI GANTC 7 cut(s) 61, 503, 631, 667, 986, 1597, 1616
HpaII CCGG 3 cut(s) 635, 652, 2076
HphI GGTGA 3 cut(s) 18, 537, 1355
Hpy166II GTNNAC 4 cut(s) 413, 805, 1625, 1740
Hpy188I TCNGA 7 cut(s) 195, 370, 630, 826, 1578, 1705, 2142
Hpy188III TCNNGA 9 cut(s) 323, 419, 534, 585, 713, 719, 756, 1357, 1826
Hpy8I GTNNAC 4 cut(s) 413, 805, 1625, 1740
HpyCH4III ACNGT 7 cut(s) 20, 334, 566, 932, 1261, 1744, 2023
HpyCH4IV ACGT 2 cut(s) 309, 466
HpyF10VI GCNNNNNNNGC 7 cut(s) 147, 284, 450, 618, 696, 1148, 1943
HpyF3I CTNAG 4 cut(s) 914, 1209, 1575, 2010
HpySE526I ACGT 2 cut(s) 309, 466
Ksp22I TGATCA 1 cut(s) 715
LguI GCTCTTC 1 cut(s) 1730
LmnI GCTCC 2 cut(s) 401, 654
Lsp1109I GCAGC 4 cut(s) 265, 501, 1013, 1016
LweI GCATC 7 cut(s) 265, 886, 892, 1435, 1447, 1546, 1807
MaeI CTAG 3 cut(s) 66, 125, 974
MaeII ACGT 2 cut(s) 309, 466
MaeIII GTNAC 8 cut(s) 14, 131, 305, 328, 760, 1331, 1343, 1510
MflI RGATCY 5 cut(s) 106, 476, 536, 1541, 2039
MhlI GDGCHC 3 cut(s) 922, 1725, 2083
MlsI TGGCCA 1 cut(s) 1528
MluNI TGGCCA 1 cut(s) 1528
MlyI GAGTC 4 cut(s) 70, 640, 676, 995
MmeI TCCRAC 2 cut(s) 1799, 2101
Mox20I TGGCCA 1 cut(s) 1528
Mph1103I ATGCAT 1 cut(s) 1318
MroXI GAANNNNTTC 1 cut(s) 1786
MscI TGGCCA 1 cut(s) 1528
MseI TTAA 4 cut(s) 1014, 1160, 1310, 1847
Msp20I TGGCCA 1 cut(s) 1528
MspI CCGG 3 cut(s) 635, 652, 2076
MspR9I CCNGG 7 cut(s) 400, 552, 1009, 1145, 1169, 1692, 2077
Mva1269I GAATGC 2 cut(s) 791, 1974
MvaI CCWGG 6 cut(s) 400, 552, 1009, 1145, 1169, 1692
MvnI CGCG 1 cut(s) 324
MwoI GCNNNNNNNGC 7 cut(s) 147, 284, 450, 618, 696, 1148, 1943
NciI CCSGG 1 cut(s) 2077
NcoI CCATGG 1 cut(s) 1194
NdeI CATATG 1 cut(s) 1942
NlaIV GGNNCC 8 cut(s) 390, 485, 620, 645, 738, 920, 1543, 1623
NmeAIII GCCGAG 2 cut(s) 460, 2075
NmuCI GTSAC 2 cut(s) 305, 1343
NruI TCGCGA 1 cut(s) 324
NsiI ATGCAT 1 cut(s) 1318
NspI RCATGY 5 cut(s) 884, 913, 1309, 1441, 1992
PagI TCATGA 1 cut(s) 718
PasI CCCWGGG 1 cut(s) 551
PciI ACATGT 2 cut(s) 880, 1305
PciSI GCTCTTC 1 cut(s) 1730
PctI GAATGC 2 cut(s) 791, 1974
PdmI GAANNNNTTC 1 cut(s) 1786
PfeI GAWTC 3 cut(s) 503, 1597, 1616
PflFI GACNNNGTC 1 cut(s) 60
PflMI CCANNNNNTGG 1 cut(s) 608
PkrI GCNGC 6 cut(s) 280, 491, 623, 1003, 1006, 2176
PleI GAGTC 4 cut(s) 69, 639, 675, 994
PpsI GAGTC 4 cut(s) 69, 639, 675, 994
PpuMI RGGWCCY 1 cut(s) 970
PscI ACATGT 2 cut(s) 880, 1305
PsiI TTATAA 1 cut(s) 1950
Psp5II RGGWCCY 1 cut(s) 970
Psp6I CCWGG 6 cut(s) 398, 550, 1007, 1143, 1167, 1690
PspGI CCWGG 6 cut(s) 398, 550, 1007, 1143, 1167, 1690
PspN4I GGNNCC 8 cut(s) 390, 485, 620, 645, 738, 920, 1543, 1623
PspOMI GGGCCC 1 cut(s) 918
PspPPI RGGWCCY 1 cut(s) 970
PstI CTGCAG 1 cut(s) 2160
PsuI RGATCY 5 cut(s) 106, 476, 536, 1541, 2039
PsyI GACNNNGTC 1 cut(s) 60
RruI TCGCGA 1 cut(s) 324
RsaI GTAC 4 cut(s) 563, 814, 1765, 2071
RsaNI GTAC 4 cut(s) 562, 813, 1764, 2070
SalI GTCGAC 1 cut(s) 411
SapI GCTCTTC 1 cut(s) 1730
SaqAI TTAA 4 cut(s) 1014, 1160, 1310, 1847
SatI GCNGC 6 cut(s) 279, 490, 622, 1002, 1005, 2175
SchI GAGTC 4 cut(s) 70, 640, 676, 995
ScrFI CCNGG 7 cut(s) 400, 552, 1009, 1145, 1169, 1692, 2077
SduI GDGCHC 3 cut(s) 922, 1725, 2083
SfaNI GCATC 7 cut(s) 265, 886, 892, 1435, 1447, 1546, 1807
SfcI CTRYAG 4 cut(s) 769, 1257, 1473, 2156
SinI GGWCC 5 cut(s) 188, 389, 644, 970, 1622
SmlI CTYRAG 3 cut(s) 613, 691, 730
SmoI CTYRAG 3 cut(s) 613, 691, 730
SsiI CCGC 4 cut(s) 281, 487, 622, 2175
SspI AATATT 1 cut(s) 530
SspMI CTAG 3 cut(s) 66, 125, 974
StyD4I CCNGG 7 cut(s) 398, 550, 1007, 1143, 1167, 1690, 2075
StyI CCWWGG 6 cut(s) 35, 71, 671, 973, 1194, 1338
TaaI ACNGT 7 cut(s) 20, 334, 566, 932, 1261, 1744, 2023
TaiI ACGT 2 cut(s) 312, 469
TaqI TCGA 3 cut(s) 412, 424, 533
TatI WGTACW 1 cut(s) 2069
TauI GCSGC 2 cut(s) 624, 2177
TfiI GAWTC 3 cut(s) 503, 1597, 1616
Tru1I TTAA 4 cut(s) 1014, 1160, 1310, 1847
Tru9I TTAA 4 cut(s) 1014, 1160, 1310, 1847
TscAI CASTG 5 cut(s) 787, 937, 1078, 1234, 1704
TseFI GTSAC 2 cut(s) 305, 1343
TseI GCWGC 4 cut(s) 278, 489, 1001, 1004
Tsp45I GTSAC 2 cut(s) 305, 1343
TspDTI ATGAA 5 cut(s) 735, 1139, 1563, 1692, 1929
TspGWI ACGGA 3 cut(s) 73, 1362, 1529
TspRI CASTG 5 cut(s) 787, 937, 1078, 1234, 1704
Tth111I GACNNNGTC 1 cut(s) 60
Van91I CCANNNNNTGG 1 cut(s) 608
VpaK11BI GGWCC 5 cut(s) 188, 389, 644, 970, 1622
XagI CCTNNNNNAGG 2 cut(s) 212, 2121
XapI RAATTY 5 cut(s) 1089, 1294, 1350, 1783, 2048
XceI RCATGY 5 cut(s) 884, 913, 1309, 1441, 1992
XmaJI CCTAGG 1 cut(s) 973
XmiI GTMKAC 2 cut(s) 412, 1739
XmnI GAANNNNTTC 1 cut(s) 1786
XspI CTAG 3 cut(s) 66, 125, 974
Zsp2I ATGCAT 1 cut(s) 1318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.