Rorug07G0212400

Tropinone reductase homolog At1g07440-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000208
Physical Location & Seq
Reverse (-)
18775481 .. 18779316
3836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0212400.1

Sequence Viewer

Length: 1389 bp
ATGGTGGTTGAAGAGACCGTGCATCTTTTGGCACCATCAAGAGAAAATGTGTCACGAAGTAATATCCCTTCTCAGGAAAGATTGGAAAGGTTTCCCATGGAGAATGGCGAGTGTTTTTCCCATACTAAGTCACCTGAGTCTAGGAGGCGTAGAGTCTCTGCTGTTTGTGATTTTCCTGTAGGGTGTGGACCATATGCTCAGTTAAGCAGTTTGAGACCTGTCAAAGAGGTGGCTTCTGTTGGTTTTCCAAATGAAGAGCTGGCTACTGCTCTGTTGGATAGAAATTGTTTTTCACCACCTGATGGATCCACATCTGTATCTAATGACAATGATCCAGAAAAGATTCCAGATAAAATGTATCCTCGTGGAAGTGTAGTAGAAGCTGTTGGGGACTTTCCTCCATTCTGTGGAGTAAATGCTTCTTTGGAGGCTAGGACTTTGGGTCAAAAGAAGTCAGTTATGGGTTACAAACCATCATCATTAAACACAGTGAAGACTGATGTGAAACAAACGGGAATTGGGGACAGAGTTCAACCTAACACTGAGGAAAAAATTCACAGGGAAAAGCCTTTTGATATATCTCATTCTCCCAACCATCTGCACGAAGAAGATTTTGAAAGCTCGCGACTTCCATTGCATAAGTTGGTTGTGTTGGATTCTGATCAATTGCAGGTTAGTATGGGAGACAAACCATCATCATCAAACACTGCCAAGACTACTGTGAAAGAACCAGGAGTGAATCTTCAAAATGAAGAGTTTTTGAAAGAATGTGATCACAGCATTGAGATGCGAAAGAAGGTGTCAGGTGCATTGCGCCTGTTTAGTGTTGTTTTTGAAAGTCTAGAAGATGAAAAGTCAGAGGAAGGATCTGCTCCTAAAAGGGTTGATCTTAAAGCTGCAAAGATTCTCAAGAAGGAAGGAAGGTTTGTAAACACAGGCAAGCAAATTATTGGGCCTGTCCCAGGTGTTGAGGTTGGTGATGAATGTAAATACAGAGTTGAACTCACAATTATTGGCTTACATCGCCAGACTCGAGCAGGTATAGACTTTGTGATGCATGGTGGTAGGATTCTTGCCACCAGCATCGTTGCCTCAGGGAGCTATGAAGATAAGATTAGCAATGAAATGTCTATAATATATACAGGCCAAGGAGGAAATTACATGCTTCCAAGGAAGAAAGCTTATGATCAGAAGCTTAAAAGGGGAAACCTTGCTTTGAAGAACAGTTTGGATGAACAAAATCCGATCAGACTCATTCATAGGCTTTACTCTTCTGATGGTCAAAGGAAATACGTGTACAAAGGGCTGTTTGTAGTAACAAAATGTTTCCGGAAAAGAGGAACTCGGGGAAAGCTGGTTTGGGAATTTCATTTGCGCCTCCTGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00960 ko01100 ko01110 map00960 map01100 map01110
Pfam Domains
Protein Families
adh_short adh_short_C2

Protein Analysis

462

Amino Acids

51.64

Weight (kDa)

8.89

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 317 - 459 1.6e-41 SAD/SRA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000208)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07440 AT1G07440 AT2G29150 AT2G29170 AT2G29290 AT2G29290 AT2G29300 AT2G29300 AT2G29310 AT2G29310 AT2G29310 AT2G29310 AT2G29320 AT2G29320 AT2G29320 AT2G29340 AT2G29340 AT2G29340 AT2G29340 AT2G29350 AT2G29350 AT2G29350
fragaria_vesca FvH4_3g01040 FvH4_3g36954 FvH4_3g36954 FvH4_3g36955 FvH4_3g36960 FvH4_3g36960 FvH4_3g37000 FvH4_3g37000 FvH4_3g37000
malus_domestica MD03G1085500.v1.1 MD03G1085700.v1.1 MD04G1134700.v1.1 MD11G1093400.v1.1 MD11G1093500.v1.1 MD11G1093700.v1.1 MD11G1093800.v1.1 MD11G1093900.v1.1 MD11G1094300.v1.1
prunus_persica Prupe.6G068900_v2.0.a1 Prupe.6G069000_v2.0.a1 Prupe.6G069000_v2.0.a1 Prupe.6G069000_v2.0.a1 Prupe.6G069100_v2.0.a1 Prupe.6G069200_v2.0.a1 Prupe.6G069500_v2.0.a1 Prupe.6G069500_v2.0.a1 Prupe.6G069700_v2.0.a1 Prupe.6G069900_v2.0.a1 Prupe.6G070000_v2.0.a1 Prupe.6G070000_v2.0.a1 Prupe.6G070000_v2.0.a1 Prupe.6G070000_v2.0.a1 Prupe.6G070000_v2.0.a1
pyrus_communis pycom03g06770 pycom11g07900 pycom11g07910 pycom11g07920 pycom11g07940 pycom11g07950 pycom11g07970 pycom11g07990 pycom12g14220
rosa_chinensis RchiOBHm_Chr2g0131701 RchiOBHm_Chr3g0473751 RchiOBHm_Chr4g0408441 RchiOBHm_Chr4g0408481 RchiOBHm_Chr4g0408501 RchiOBHm_Chr4g0408561 RchiOBHm_Chr4g0408611 RchiOBHm_Chr4g0408661 RchiOBHm_Chr4g0408721 RchiOBHm_Chr5g0045781 RchiOBHm_Chr5g0045851 RchiOBHm_Chr5g0068421 RchiOBHm_Chr7g0222951
rosa_laevigata RLG00000008645 RLG00000008646 RLG00000008649 RLG00000035864
rosa_multiflora Rmu_sc0000774.1_g000007 Rmu_sc0001746.1_g000006 Rmu_sc0002589.1_g000024 Rmu_sc0002736.1_g000004 Rmu_sc0003677.1_g000008 Rmu_sc0005087.1_g000003 Rmu_sc0005878.1_g000021 Rmu_sc0006514.1_g000011 Rmu_sc0025386.1_g000001 Rmu_sc0032361.1_g000001
rosa_roxburghii Rroxscaffold_1G00012360 Rroxscaffold_1G00013090 Rroxscaffold_1G00035120 Rroxscaffold_3G00236380 Rroxscaffold_5G00352920 Rroxscaffold_5G00352950 Rroxscaffold_5G00352980 Rroxscaffold_5G00353000 Rroxscaffold_5G00353020
rosa_rugosa Rorug02G0295300 Rorug04G0086300 Rorug04G0094800 Rorug05G0226700 Rorug05G0378300 Rorug05G0389700 Rorug07G0212400 Rorug07G0219800 Rorug07G0219900
rosa_samantha Rh1AG094900 Rh2AG351700 Rh2BG358700 Rh2CG337200 Rh2DG376100 Rh3DG297400 Rh3DG365100 Rh4AG150600 Rh4AG150800 Rh4BG147900 Rh4BG148000 Rh4BG148100 Rh4CG158000 Rh4CG158700 Rh4CG159300 Rh4DG143600 Rh4DG143800 Rh4DG144200 Rh5AG307900 Rh5AG448500 Rh5BG316300 Rh5BG316700 Rh5BG466500 Rh5CG342400 Rh5CG488100 Rh5DG326600 Rh5DG480000 Rh7AG357400 Rh7AG406600 Rh7BG345700 Rh7CG375600 Rh7DG352300
rosa_wichuraiana Rw2G028560 Rw4G012300 Rw4G012330 Rw4G012340 Rw4G012350 Rw5G022400 Rw5G028830 Rw5G041870 Rw7G030400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 661, 1028
AccB1I GGYRCC 1 cut(s) 31
AccB7I CCANNNNNTGG 2 cut(s) 302, 407
AccII CGCG 1 cut(s) 625
AccIII TCCGGA 1 cut(s) 1329
AclWI GGATC 4 cut(s) 300, 313, 326, 874
AcsI RAATTY 2 cut(s) 552, 1364
AfaI GTAC 1 cut(s) 1298
AfiI CCNNNNNNNGG 4 cut(s) 73, 302, 407, 962
AflIII ACRYGT 1 cut(s) 1293
AgsI TTSAA 8 cut(s) 11, 533, 617, 746, 763, 836, 1001, 1219
AhdI GACNNNNNGTC 1 cut(s) 441
AjnI CCWGG 2 cut(s) 730, 961
AjuI GAANNNNNNNTTGG 4 cut(s) 1211, 1243, 1342, 1374
AluBI AGCT 8 cut(s) 259, 383, 621, 896, 1101, 1181, 1195, 1354
AluI AGCT 8 cut(s) 259, 383, 621, 896, 1101, 1181, 1195, 1354
Alw26I GTCTC 4 cut(s) 8, 160, 208, 678
AlwI GGATC 4 cut(s) 300, 313, 326, 874
Ama87I CYCGRG 2 cut(s) 1032, 1344
Aor13HI TCCGGA 1 cut(s) 1329
AoxI GGCC 2 cut(s) 953, 1144
ApeKI GCWGC 1 cut(s) 896
ApoI RAATTY 2 cut(s) 552, 1364
Asp700I GAANNNNTTC 3 cut(s) 90, 342, 552
AspLEI GCGC 2 cut(s) 816, 1377
AspS9I GGNCC 2 cut(s) 188, 953
AsuHPI GGTGA 3 cut(s) 123, 285, 989
AvaI CYCGRG 2 cut(s) 1032, 1344
AvaII GGWCC 1 cut(s) 188
AxyI CCTNAGG 1 cut(s) 1093
BaeI ACNNNNGTAYC 2 cut(s) 300, 333
BamHI GGATCC 1 cut(s) 305
BanI GGYRCC 1 cut(s) 31
BarI GAAGNNNNNNTAC 2 cut(s) 52, 84
BauI CACGAG 1 cut(s) 363
BbsI GAAGAC 1 cut(s) 500
BbvI GCAGC 1 cut(s) 883
BccI CCATC 6 cut(s) 43, 296, 481, 603, 700, 1271
BciT130I CCWGG 2 cut(s) 732, 963
BciVI GTATCC 1 cut(s) 369
BclI TGATCA 3 cut(s) 661, 772, 1186
BcoDI GTCTC 4 cut(s) 8, 160, 208, 678
BfaI CTAG 3 cut(s) 141, 432, 842
BfmI CTRYAG 1 cut(s) 177
BfuAI ACCTGC 2 cut(s) 661, 1028
BfuI GTATCC 1 cut(s) 369
BisI GCNGC 1 cut(s) 897
BlsI GCNGC 1 cut(s) 898
Bme1390I CCNGG 2 cut(s) 732, 963
Bme18I GGWCC 1 cut(s) 188
BmeRI GACNNNNNGTC 1 cut(s) 441
BmeT110I CYCGRG 2 cut(s) 1032, 1344
BmgT120I GGNCC 2 cut(s) 188, 953
BmiI GGNNCC 2 cut(s) 33, 307
BmrFI CCNGG 2 cut(s) 732, 963
BmsI GCATC 4 cut(s) 31, 777, 1044, 1092
BpiI GAAGAC 1 cut(s) 500
BplI GAGNNNNNCTC 2 cut(s) 987, 1019
BpuEI CTTGAG 1 cut(s) 893
BsaAI YACGTR 1 cut(s) 1294
BsaBI GATNNNNATC 2 cut(s) 310, 660
BsaI GGTCTC 2 cut(s) 8, 208
BsaJI CCNNGG 4 cut(s) 96, 961, 1147, 1169
BsaWI WCCGGW 1 cut(s) 1329
Bsc4I CCNNNNNNNGG 4 cut(s) 73, 302, 407, 962
Bse21I CCTNAGG 1 cut(s) 1093
Bse3DI GCAATG 3 cut(s) 632, 809, 1126
Bse8I GATNNNNATC 2 cut(s) 310, 660
BseAI TCCGGA 1 cut(s) 1329
BseBI CCWGG 2 cut(s) 732, 963
BseDI CCNNGG 4 cut(s) 96, 961, 1147, 1169
BseGI GGATG 1 cut(s) 1237
BseJI GATNNNNATC 2 cut(s) 310, 660
BseLI CCNNNNNNNGG 4 cut(s) 73, 302, 407, 962
BseMI GCAATG 3 cut(s) 632, 809, 1126
BseMII CTCAG 5 cut(s) 86, 126, 212, 534, 1107
BseXI GCAGC 1 cut(s) 883
BsgI GTGCAG 1 cut(s) 584
Bsh1236I CGCG 1 cut(s) 625
BshFI GGCC 2 cut(s) 955, 1146
BshNI GGYRCC 1 cut(s) 31
BsiHKCI CYCGRG 2 cut(s) 1032, 1344
BsiSI CCGG 1 cut(s) 1330
BslFI GGGAC 3 cut(s) 404, 536, 944
BslI CCNNNNNNNGG 4 cut(s) 73, 302, 407, 962
BsmAI GTCTC 4 cut(s) 8, 160, 208, 678
BsmFI GGGAC 3 cut(s) 404, 536, 944
BsnI GGCC 2 cut(s) 955, 1146
Bso31I GGTCTC 2 cut(s) 8, 208
BsoBI CYCGRG 2 cut(s) 1032, 1344
Bsp13I TCCGGA 1 cut(s) 1329
Bsp1407I TGTACA 1 cut(s) 1296
Bsp143I GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
Bsp19I CCATGG 1 cut(s) 96
Bsp68I TCGCGA 1 cut(s) 625
BspANI GGCC 2 cut(s) 955, 1146
BspCNI CTCAG 5 cut(s) 85, 127, 211, 535, 1106
BspEI TCCGGA 1 cut(s) 1329
BspFNI CGCG 1 cut(s) 625
BspLI GGNNCC 2 cut(s) 33, 307
BspMI ACCTGC 2 cut(s) 661, 1028
BspPI GGATC 4 cut(s) 300, 313, 326, 874
BspQI GCTCTTC 1 cut(s) 249
BspT107I GGYRCC 1 cut(s) 31
BspTNI GGTCTC 2 cut(s) 8, 208
BsrDI GCAATG 3 cut(s) 632, 809, 1126
BsrGI TGTACA 1 cut(s) 1296
BssECI CCNNGG 4 cut(s) 96, 961, 1147, 1169
BssMI GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
BssSI CACGAG 1 cut(s) 363
BssT1I CCWWGG 3 cut(s) 96, 1147, 1169
Bst2BI CACGAG 1 cut(s) 363
Bst2UI CCWGG 2 cut(s) 732, 963
Bst4CI ACNGT 4 cut(s) 19, 490, 721, 1226
Bst6I CTCTTC 4 cut(s) 6, 249, 747, 1276
BstAUI TGTACA 1 cut(s) 1296
BstBAI YACGTR 1 cut(s) 1294
BstC8I GCNNGC 3 cut(s) 261, 623, 941
BstDEI CTNAG 6 cut(s) 72, 126, 135, 198, 543, 1093
BstDSI CCRYGG 1 cut(s) 96
BstENI CCTNNNNNAGG 1 cut(s) 960
BstF5I GGATG 1 cut(s) 1237
BstFNI CGCG 1 cut(s) 625
BstHHI GCGC 2 cut(s) 816, 1377
BstKTI GATC 8 cut(s) 308, 334, 664, 775, 869, 889, 1189, 1248
BstMAI GTCTC 4 cut(s) 8, 160, 208, 678
BstMBI GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
BstMWI GCNNNNNNNGC 1 cut(s) 1023
BstNI CCWGG 2 cut(s) 732, 963
BstNSI RCATGY 1 cut(s) 1165
BstSCI CCNGG 2 cut(s) 730, 961
BstSFI CTRYAG 1 cut(s) 177
BstUI CGCG 1 cut(s) 625
BstV1I GCAGC 1 cut(s) 883
BstV2I GAAGAC 1 cut(s) 500
BstX2I RGATCY 2 cut(s) 305, 866
BstYI RGATCY 2 cut(s) 305, 866
Bsu36I CCTNAGG 1 cut(s) 1093
BsuI GTATCC 1 cut(s) 369
BsuRI GGCC 2 cut(s) 955, 1146
BtgI CCRYGG 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 1007
BtsCI GGATG 1 cut(s) 1237
BtsI GCAGTG 1 cut(s) 705
BtsIMutI CAGTG 3 cut(s) 495, 540, 705
BtuMI TCGCGA 1 cut(s) 625
BveI ACCTGC 2 cut(s) 661, 1028
Cac8I GCNNGC 3 cut(s) 261, 623, 941
CfoI GCGC 2 cut(s) 816, 1377
Cfr13I GGNCC 2 cut(s) 188, 953
Csp6I GTAC 1 cut(s) 1297
CviAII CATG 3 cut(s) 97, 1058, 1162
CviQI GTAC 1 cut(s) 1297
DdeI CTNAG 6 cut(s) 72, 126, 135, 198, 543, 1093
DpnI GATC 8 cut(s) 307, 333, 663, 774, 868, 888, 1188, 1247
DpnII GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
DriI GACNNNNNGTC 1 cut(s) 441
Eam1104I CTCTTC 4 cut(s) 6, 249, 747, 1276
Eam1105I GACNNNNNGTC 1 cut(s) 441
EarI CTCTTC 4 cut(s) 6, 249, 747, 1276
Eco130I CCWWGG 3 cut(s) 96, 1147, 1169
Eco31I GGTCTC 2 cut(s) 8, 208
Eco47I GGWCC 1 cut(s) 188
Eco81I CCTNAGG 1 cut(s) 1093
Eco88I CYCGRG 2 cut(s) 1032, 1344
EcoNI CCTNNNNNAGG 1 cut(s) 960
EcoRII CCWGG 2 cut(s) 730, 961
EcoT14I CCWWGG 3 cut(s) 96, 1147, 1169
EcoT22I ATGCAT 1 cut(s) 1059
ErhI CCWWGG 3 cut(s) 96, 1147, 1169
FaeI CATG 3 cut(s) 100, 1061, 1165
FaqI GGGAC 3 cut(s) 404, 536, 944
FatI CATG 3 cut(s) 96, 1057, 1161
FauNDI CATATG 1 cut(s) 193
FbaI TGATCA 3 cut(s) 661, 772, 1186
Fnu4HI GCNGC 1 cut(s) 897
FokI GGATG 1 cut(s) 1244
Fsp4HI GCNGC 1 cut(s) 897
FspBI CTAG 3 cut(s) 141, 432, 842
GlaI GCGC 2 cut(s) 815, 1376
GluI GCNGC 1 cut(s) 897
HaeIII GGCC 2 cut(s) 955, 1146
HapII CCGG 1 cut(s) 1330
HhaI GCGC 2 cut(s) 816, 1377
Hin1II CATG 3 cut(s) 100, 1061, 1165
Hin6I GCGC 2 cut(s) 814, 1375
HinP1I GCGC 2 cut(s) 814, 1375
HindIII AAGCTT 2 cut(s) 1179, 1193
HinfI GANTC 9 cut(s) 137, 153, 343, 656, 739, 904, 1030, 1069, 1251
HpaII CCGG 1 cut(s) 1330
HphI GGTGA 3 cut(s) 123, 285, 989
Hpy166II GTNNAC 3 cut(s) 188, 931, 1297
Hpy188I TCNGA 6 cut(s) 661, 859, 1191, 1245, 1250, 1276
Hpy188III TCNNGA 9 cut(s) 39, 54, 74, 335, 347, 624, 842, 910, 1330
Hpy8I GTNNAC 3 cut(s) 188, 931, 1297
HpyAV CCTTC 6 cut(s) 78, 790, 857, 907, 911, 915
HpyCH4III ACNGT 4 cut(s) 19, 490, 721, 1226
HpyCH4IV ACGT 1 cut(s) 1293
HpyCH4V TGCA 7 cut(s) 22, 601, 637, 670, 809, 899, 1057
HpyF10VI GCNNNNNNNGC 1 cut(s) 1023
HpyF3I CTNAG 6 cut(s) 72, 126, 135, 198, 543, 1093
HpySE526I ACGT 1 cut(s) 1293
Hsp92II CATG 3 cut(s) 100, 1061, 1165
HspAI GCGC 2 cut(s) 814, 1375
Kpn2I TCCGGA 1 cut(s) 1329
Ksp22I TGATCA 3 cut(s) 661, 772, 1186
Kzo9I GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
LguI GCTCTTC 1 cut(s) 249
LmnI GCTCC 2 cut(s) 877, 1098
Lsp1109I GCAGC 1 cut(s) 883
LweI GCATC 4 cut(s) 31, 777, 1044, 1092
MaeI CTAG 3 cut(s) 141, 432, 842
MaeII ACGT 1 cut(s) 1293
MaeIII GTNAC 4 cut(s) 51, 129, 464, 1315
MalI GATC 8 cut(s) 307, 333, 663, 774, 868, 888, 1188, 1247
MboI GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
MfeI CAATTG 1 cut(s) 665
MflI RGATCY 2 cut(s) 305, 866
MluCI AATT 8 cut(s) 283, 516, 552, 665, 945, 1008, 1156, 1364
MlyI GAGTC 4 cut(s) 146, 162, 1024, 1245
MmeI TCCRAC 2 cut(s) 255, 633
Mph1103I ATGCAT 1 cut(s) 1059
MroI TCCGGA 1 cut(s) 1329
MroXI GAANNNNTTC 3 cut(s) 90, 342, 552
MseI TTAA 4 cut(s) 203, 482, 891, 1197
MslI CAYNNNNRTG 1 cut(s) 785
MspI CCGG 1 cut(s) 1330
MspR9I CCNGG 2 cut(s) 732, 963
MunI CAATTG 1 cut(s) 665
MvaI CCWGG 2 cut(s) 732, 963
MvnI CGCG 1 cut(s) 625
MwoI GCNNNNNNNGC 1 cut(s) 1023
NcoI CCATGG 1 cut(s) 96
NdeI CATATG 1 cut(s) 193
NdeII GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
NlaIII CATG 3 cut(s) 100, 1061, 1165
NlaIV GGNNCC 2 cut(s) 33, 307
NmuCI GTSAC 2 cut(s) 51, 129
NruI TCGCGA 1 cut(s) 625
NsiI ATGCAT 1 cut(s) 1059
NspI RCATGY 1 cut(s) 1165
PaeR7I CTCGAG 1 cut(s) 1032
PciSI GCTCTTC 1 cut(s) 249
PcsI WCGNNNNNNNCGW 1 cut(s) 1030
PdmI GAANNNNTTC 3 cut(s) 90, 342, 552
PfeI GAWTC 5 cut(s) 343, 656, 739, 904, 1069
PflMI CCANNNNNTGG 2 cut(s) 302, 407
PkrI GCNGC 1 cut(s) 898
PleI GAGTC 4 cut(s) 145, 161, 1024, 1245
PpsI GAGTC 4 cut(s) 145, 161, 1024, 1245
Ppu21I YACGTR 1 cut(s) 1294
Psp6I CCWGG 2 cut(s) 730, 961
PspGI CCWGG 2 cut(s) 730, 961
PspN4I GGNNCC 2 cut(s) 33, 307
PspPI GGNCC 2 cut(s) 188, 953
PspXI VCTCGAGB 1 cut(s) 1032
PsuI RGATCY 2 cut(s) 305, 866
RruI TCGCGA 1 cut(s) 625
RsaI GTAC 1 cut(s) 1298
RsaNI GTAC 1 cut(s) 1297
RseI CAYNNNNRTG 1 cut(s) 785
SapI GCTCTTC 1 cut(s) 249
SaqAI TTAA 4 cut(s) 203, 482, 891, 1197
SatI GCNGC 1 cut(s) 897
Sau3AI GATC 8 cut(s) 305, 331, 661, 772, 866, 886, 1186, 1245
Sau96I GGNCC 2 cut(s) 188, 953
SchI GAGTC 4 cut(s) 146, 162, 1024, 1245
ScrFI CCNGG 2 cut(s) 732, 963
SfaNI GCATC 4 cut(s) 31, 777, 1044, 1092
SfcI CTRYAG 1 cut(s) 177
Sfr274I CTCGAG 1 cut(s) 1032
SinI GGWCC 1 cut(s) 188
SlaI CTCGAG 1 cut(s) 1032
SmiMI CAYNNNNRTG 1 cut(s) 785
SmlI CTYRAG 2 cut(s) 908, 1032
SmoI CTYRAG 2 cut(s) 908, 1032
Sse9I AATT 8 cut(s) 283, 516, 552, 665, 945, 1008, 1156, 1364
SspMI CTAG 3 cut(s) 141, 432, 842
StyD4I CCNGG 2 cut(s) 730, 961
StyI CCWWGG 3 cut(s) 96, 1147, 1169
TaaI ACNGT 4 cut(s) 19, 490, 721, 1226
TaiI ACGT 1 cut(s) 1296
TaqI TCGA 1 cut(s) 1033
TasI AATT 8 cut(s) 283, 516, 552, 665, 945, 1008, 1156, 1364
TatI WGTACW 1 cut(s) 1296
TfiI GAWTC 5 cut(s) 343, 656, 739, 904, 1069
Tru1I TTAA 4 cut(s) 203, 482, 891, 1197
Tru9I TTAA 4 cut(s) 203, 482, 891, 1197
TscAI CASTG 3 cut(s) 495, 547, 712
TseFI GTSAC 2 cut(s) 51, 129
TseI GCWGC 1 cut(s) 896
Tsp45I GTSAC 2 cut(s) 51, 129
TspDTI ATGAA 9 cut(s) 267, 765, 864, 996, 1119, 1137, 1247, 1248, 1358
TspRI CASTG 3 cut(s) 495, 547, 712
Van91I CCANNNNNTGG 2 cut(s) 302, 407
VpaK11BI GGWCC 1 cut(s) 188
XagI CCTNNNNNAGG 1 cut(s) 960
XapI RAATTY 2 cut(s) 552, 1364
XbaI TCTAGA 1 cut(s) 841
XceI RCATGY 1 cut(s) 1165
XhoI CTCGAG 1 cut(s) 1032
XmnI GAANNNNTTC 3 cut(s) 90, 342, 552
XspI CTAG 3 cut(s) 141, 432, 842
Zsp2I ATGCAT 1 cut(s) 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.