Rh6AG426700

Guanine nucleotide-binding protein subunit beta-like protein 1 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
61870498 .. 61890726
20229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG426700.1

Sequence Viewer

Length: 447 bp
ATGTTTAAATCTGATGCATTCTTTCCATTTCCTGTTGTGTCTTCTCCAACCTTAGGGTACATGTGTGATAAAAGAATAAAAGAAGAAATTGATTTGGAGCGACCTGGCATATCAAGAACCTCTATTCGACCTGATGGTAAAATCATTGCAACAGCTGGCTGGGATCACAGAGGACACCATGGTGGCACTTTGGAAACTCTATACTCCTCAAACCTGAGAGTGATATTAGAATCACATCGAGAATCAGTAAATGTTTCTGTTTCTGTAACTCCTGATGCAATGAATAATGTATACAAGGTGATTATTGATCCACTATGTGATGAAGAGAATATTGCTACTGATCTAGCAAGTAATGCAGACCAATTTCTGGAACAAGATATATCTGCATCTTCACTTAGATTTCTTGCTTGTAGTCAGGTATATCAATATTTATTTAGTTGGTCTTAA

Protein Analysis

148

Amino Acids

16.59

Weight (kDa)

4.96

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000414)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g15941 FvH4_1g22181 FvH4_3g31442 FvH4_4g06832 FvH4_5g15722 FvH4_6g30661 FvH4_7g13761
rosa_chinensis RchiOBHm_Chr3g0478271 RchiOBHm_Chr4g0421141
rosa_laevigata RLG00000002038 RLG00000016047 RLG00000021902 RLG00000024696 RLG00000027779 RLG00000033727 RLG00000035621
rosa_multiflora Rmu_sc0000125.1_g000007 Rmu_sc0000221.1_g000019 Rmu_sc0000221.1_g000020 Rmu_sc0000338.1_g000006 Rmu_sc0000429.1_g000059 Rmu_sc0000429.1_g000060 Rmu_sc0000429.1_g000061 Rmu_sc0000543.1_g000046 Rmu_sc0000689.1_g000008 Rmu_sc0000689.1_g000009 Rmu_sc0001436.1_g000002 Rmu_sc0001634.1_g000004 Rmu_sc0001782.1_g000025 Rmu_sc0002206.1_g000012 Rmu_sc0002985.1_g000008 Rmu_sc0002985.1_g000009 Rmu_sc0003044.1_g000040 Rmu_sc0003044.1_g000041 Rmu_sc0003044.1_g000042 Rmu_sc0003275.1_g000010 Rmu_sc0003561.1_g000002 Rmu_sc0003850.1_g000001 Rmu_sc0003850.1_g000002 Rmu_sc0004092.1_g000039 Rmu_sc0004311.1_g000003 Rmu_sc0004443.1_g000016 Rmu_sc0004542.1_g000002 Rmu_sc0004873.1_g000001 Rmu_sc0005757.1_g000002 Rmu_sc0005964.1_g000004 Rmu_sc0006598.1_g000014 Rmu_sc0006598.1_g000015 Rmu_sc0006889.1_g000023 Rmu_sc0007059.1_g000007 Rmu_sc0007390.1_g000014 Rmu_sc0008085.1_g000015 Rmu_sc0009948.1_g000001 Rmu_sc0010235.1_g000005 Rmu_sc0010665.1_g000022 Rmu_sc0011183.1_g000001 Rmu_sc0021637.1_g000001 Rmu_ssc0000242.1_g000016 Rmu_ssc0000317.1_g000003 Rmu_ssc0000317.1_g000004 Rmu_ssc0000432.1_g000093 Rmu_ssc0000432.1_g000095
rosa_roxburghii Rroxscaffold_1G00024670 Rroxscaffold_1G00047120 Rroxscaffold_4G00283230 Rroxscaffold_5G00365300 Rroxscaffold_7G00192220
rosa_rugosa Rorug03G0325200 Rorug06G0093800 Rorug07G0209800
rosa_samantha Rh1AG084000 Rh1AG202300 Rh1AG294200 Rh1BG259000 Rh2AG357500 Rh2AG389500 Rh2CG376700 Rh2CG468700 Rh2DG441200 Rh2DG504700 Rh2DG505700 Rh3BG359700 Rh3DG120200 Rh4BG161300 Rh4CG087000 Rh5BG550100 Rh5CG573000 Rh6AG284900 Rh6AG426700 Rh7DG285400
rosa_wichuraiana Rw1G030090 Rw2G030600 Rw3G018220 Rw3G027930 Rw4G000900 Rw6G003680 Rw6G036920 Rw6G043190 Rw7G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 367
AccI GTMKAC 1 cut(s) 291
AclWI GGATC 2 cut(s) 171, 302
AdeI CACNNNGTG 1 cut(s) 317
AfaI GTAC 1 cut(s) 59
AfiI CCNNNNNNNGG 2 cut(s) 53, 367
AflIII ACRYGT 1 cut(s) 60
AjnI CCWGG 1 cut(s) 103
AleI CACNNNNGTG 1 cut(s) 180
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
AlwI GGATC 2 cut(s) 171, 302
AsuHPI GGTGA 1 cut(s) 310
AxyI CCTNAGG 1 cut(s) 52
BaeI ACNNNNGTAYC 2 cut(s) 49, 82
BbsI GAAGAC 1 cut(s) 33
BccI CCATC 1 cut(s) 128
BciT130I CCWGG 1 cut(s) 105
BfaI CTAG 1 cut(s) 344
Bme1390I CCNGG 1 cut(s) 105
BmrFI CCNGG 1 cut(s) 105
BmsI GCATC 3 cut(s) 4, 265, 395
BpiI GAAGAC 1 cut(s) 33
BsaJI CCNNGG 1 cut(s) 178
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 367
Bse21I CCTNAGG 1 cut(s) 52
Bse3DI GCAATG 2 cut(s) 144, 285
BseBI CCWGG 1 cut(s) 105
BseDI CCNNGG 1 cut(s) 178
BseLI CCNNNNNNNGG 2 cut(s) 53, 367
BseMI GCAATG 2 cut(s) 144, 285
BseMII CTCAG 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 196
BseYI CCCAGC 1 cut(s) 159
BslI CCNNNNNNNGG 2 cut(s) 53, 367
BsmI GAATGC 1 cut(s) 17
Bsp143I GATC 3 cut(s) 163, 307, 340
Bsp19I CCATGG 1 cut(s) 178
BspCNI CTCAG 1 cut(s) 207
BspPI GGATC 2 cut(s) 171, 302
BsrDI GCAATG 2 cut(s) 144, 285
BssECI CCNNGG 1 cut(s) 178
BssMI GATC 3 cut(s) 163, 307, 340
BssNAI GTATAC 1 cut(s) 292
BssT1I CCWWGG 1 cut(s) 178
Bst1107I GTATAC 1 cut(s) 292
Bst2UI CCWGG 1 cut(s) 105
Bst6I CTCTTC 1 cut(s) 318
BstAPI GCANNNNNTGC 1 cut(s) 353
BstC8I GCNNGC 1 cut(s) 157
BstDEI CTNAG 3 cut(s) 52, 215, 395
BstDSI CCRYGG 1 cut(s) 178
BstKTI GATC 3 cut(s) 166, 310, 343
BstMBI GATC 3 cut(s) 163, 307, 340
BstMWI GCNNNNNNNGC 1 cut(s) 353
BstNI CCWGG 1 cut(s) 105
BstNSI RCATGY 1 cut(s) 64
BstSCI CCNGG 1 cut(s) 103
BstV2I GAAGAC 1 cut(s) 33
BstZ17I GTATAC 1 cut(s) 292
Bsu36I CCTNAGG 1 cut(s) 52
BtgI CCRYGG 1 cut(s) 178
Cac8I GCNNGC 1 cut(s) 157
Csp6I GTAC 1 cut(s) 58
CviAII CATG 2 cut(s) 61, 179
CviJI RGCY 2 cut(s) 155, 159
CviKI_1 RGCY 2 cut(s) 155, 159
CviQI GTAC 1 cut(s) 58
DdeI CTNAG 3 cut(s) 52, 215, 395
DpnI GATC 3 cut(s) 165, 309, 342
DpnII GATC 3 cut(s) 163, 307, 340
DraI TTTAAA 1 cut(s) 7
DraIII CACNNNGTG 1 cut(s) 317
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Eco130I CCWWGG 1 cut(s) 178
Eco81I CCTNAGG 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 178
EcoT22I ATGCAT 1 cut(s) 19
ErhI CCWWGG 1 cut(s) 178
FaeI CATG 2 cut(s) 64, 182
FaiI YATR 8 cut(s) 62, 110, 180, 202, 292, 316, 380, 421
FatI CATG 2 cut(s) 60, 178
FblI GTMKAC 1 cut(s) 291
FspBI CTAG 1 cut(s) 344
GsaI CCCAGC 1 cut(s) 163
Hin1II CATG 2 cut(s) 64, 182
HinfI GANTC 2 cut(s) 230, 242
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 4 cut(s) 114, 239, 272, 368
Hpy8I GTNNAC 1 cut(s) 292
HpyCH4V TGCA 5 cut(s) 17, 149, 278, 356, 386
HpyF10VI GCNNNNNNNGC 1 cut(s) 353
HpyF3I CTNAG 3 cut(s) 52, 215, 395
Hsp92II CATG 2 cut(s) 64, 182
Kzo9I GATC 3 cut(s) 163, 307, 340
LmnI GCTCC 1 cut(s) 97
LweI GCATC 3 cut(s) 4, 265, 395
MaeI CTAG 1 cut(s) 344
MaeIII GTNAC 1 cut(s) 265
MalI GATC 3 cut(s) 165, 309, 342
MboI GATC 3 cut(s) 163, 307, 340
MboII GAAGA 4 cut(s) 33, 95, 335, 381
MluCI AATT 2 cut(s) 87, 362
MmeI TCCRAC 1 cut(s) 71
MnlI CCTC 3 cut(s) 130, 164, 217
Mph1103I ATGCAT 1 cut(s) 19
MseI TTAA 2 cut(s) 6, 445
MslI CAYNNNNRTG 1 cut(s) 180
MspA1I CMGCKG 1 cut(s) 155
MspR9I CCNGG 1 cut(s) 105
Mva1269I GAATGC 1 cut(s) 17
MvaI CCWGG 1 cut(s) 105
MwoI GCNNNNNNNGC 1 cut(s) 353
NcoI CCATGG 1 cut(s) 178
NdeII GATC 3 cut(s) 163, 307, 340
NlaIII CATG 2 cut(s) 64, 182
NsiI ATGCAT 1 cut(s) 19
NspI RCATGY 1 cut(s) 64
OliI CACNNNNGTG 1 cut(s) 180
PciI ACATGT 1 cut(s) 60
PctI GAATGC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 230, 242
PflMI CCANNNNNTGG 1 cut(s) 367
PscI ACATGT 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 103
PspFI CCCAGC 1 cut(s) 159
PspGI CCWGG 1 cut(s) 103
PvuII CAGCTG 1 cut(s) 155
RsaI GTAC 1 cut(s) 59
RsaNI GTAC 1 cut(s) 58
RseI CAYNNNNRTG 1 cut(s) 180
SaqAI TTAA 2 cut(s) 6, 445
Sau3AI GATC 3 cut(s) 163, 307, 340
ScrFI CCNGG 1 cut(s) 105
SetI ASST 8 cut(s) 53, 106, 122, 133, 157, 216, 300, 420
SfaNI GCATC 3 cut(s) 4, 265, 395
SmiMI CAYNNNNRTG 1 cut(s) 180
Sse9I AATT 2 cut(s) 87, 362
SspI AATATT 2 cut(s) 331, 428
SspMI CTAG 1 cut(s) 344
StyD4I CCNGG 1 cut(s) 103
StyI CCWWGG 1 cut(s) 178
TaqI TCGA 2 cut(s) 127, 238
TasI AATT 2 cut(s) 87, 362
TfiI GAWTC 2 cut(s) 230, 242
Tru1I TTAA 2 cut(s) 6, 445
Tru9I TTAA 2 cut(s) 6, 445
TspDTI ATGAA 2 cut(s) 296, 336
Van91I CCANNNNNTGG 1 cut(s) 367
XceI RCATGY 1 cut(s) 64
XmiI GTMKAC 1 cut(s) 291
XspI CTAG 1 cut(s) 344
Zsp2I ATGCAT 1 cut(s) 19
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.