Rw3G018220

FAR1-related protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
20236284 .. 20244946
8663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G018220.1

Sequence Viewer

Length: 2355 bp
ATGGATAATTCATTGGGTGCTACAGACATTGATATTGAGAATTCTGATTTGGAGTTGGATTGGAAACCTAGAAAAGGAATGGAGTTTGATTTTGAACAAGCAGCTTATGACTTCTACAATAGATATGGAGGAAAAAAGGGGTTTAGTATTAGAAGGGAGACTCATGGTAAGAATAAAAGAACAAAAGAACTCACTTCAAGATTATTTGTTTGCTGTAAGGAAGGTTTTCGATCCAAAGATAAGAGGGATTACATGATCAGAAAACCCAGAGCAGAGACAAGAACAGGTTGCGGTGCTCAACTTTGTATTAAATTGAATAGGAGGAACAATAAGTTCTTTGTTACCCATTTTGTTGAAGAGCACAATCATCCTCTTGTGGGGAAAGAATGTTCCCACATGCTACCTTCGCAACGGAAAGTACAAGACTCTCAAGGCATTGACATAGACTTAGCACACGATTCTGGAATTGGTGTGACTTCTTTATATGAATTGATGGGTAAGCAAGCAGGTGGAAGAGATGCTGTTGGGTATACAAAACAGGATGTAAAAAACTACCTTCGATCAAGGAGACAGAGAAGCTTGGAGTATGGAGAAGCTGGATATATTATGAAATATTTTTCAGATCAAACATTGGAAAACCCTTCATTCTACCATGCTATGCAATTAGATAGTGAGGAGCAAATAACAAACTTATTTTGGGCAGATGCTAAAATGATCATTGATTATGGCCAATTTGGGGATGTTGTTAGTTTTGATACAACATACAAGGTTAACAAATCTAATCGACCTCTTGCTGTGTTTGTAGGATTCAATCATCACCGCGAGACTATTATATTTGGGGTGGCTCTAATGTATGATGAAACAGCTGATTCATTTATATGGTTGTTTGAGACATTTTTGAGGGCAATGTCTGGAAAGGCTCCAAAGACAATATTTACAGATCAAGATGCTGCAATGGCAAAGGCTCTTCGACATGTTATGCCTGATTCATATCATAGGCTTTGCAAATGGCATATGATGCAAAATGCCATAAAGCATGGACATAGTTTTTTGACAGAAGAAGGTGGGATCACAAGTGTTTTGTCAAGGTTCATGGAAAATATTGAGGAGGAAGATGAGTTTATATCTGCTTGGTATGCTATGCTTGATAAATATGGTGCTCGTGACAATACTTGGTTAAGTAGCATATATGATTTAAGAGAAAAATGGGGCTTTCCGTATGTTAAGCGAGCATGGTCAGCTGGAATAAGAAGCACTCAACTGAGTGAAAGTTTTAACTCGGCCTTGAAAAAATATTTAGACTCTGACCATAATCTGTCAGAGTTTTTTATACACTTTGAGAGGATGGTTACTGATAAAAGGTATAAGGAGTTAGAAGCAGAATATGATATGTGCTTCAGGTTGCCTATTCTGAAAATGCATGTGAAAATGCTATATGAAGCAAGAAGAGTTTACACTAAGCTGATATTTGAAGATTTTCAGGATCAATTTGAATCATCCCTTGAAGCTTCTATAACAAATTGTGTTGATATTGATGGTGGAAAGATATATACAGTTATTAGAGATGGTTACTCTAGAGAACGCCAAGTGAAGAGAGATAGTGATGATATAGTCTCTTGTAGTTGCAGATTGTTTGAGATGAAAGGGGTTGTATGTAGGCACATTATCAAGGTCCTTAGAGAAGTGATGCAAATCAAAGAAATTCCTGAGCATTATATCTTAAAAAGATGGACCAAAAAAGCTAGAGCTGAAAGTGTTCAAGACATGCATGGGCGTGAAATTCAACCAGACCCTAAGTTGCAGCAAGCCTCTTGGTACAGATCCTTATGTTCCACCTACATTAGGATATCAAACAGGGCTTCTGAAAATGAAAAGGCATACAAATTAGCAATGATACATGCAGAGAAATTAGCAAAAGAAATTGAAGACTTGCTACGGTCTGAAATGAATGCTAATGGGGATGAGAATGAACATACAACTCAATCTACTCCTATTGAACAACTCAATGGTAATGTGGTGAATGCAAAGGGACTGAAGAAAAAGGAATCTTCTAGAGGAAGAAAACGGCGAATCAAGAGTCAATTGGAGATGAGCATGGAAAAAAATAAAAGACAGAAACAATCTAGTAAAAAAGCTATTGAGCTTTACTGTGTTCATCGCAACCAGTTGCATCAACCACCTTACCAATGCACGGTAAGTGCGGCCGGACGGGTAATTGAGACCGTGTTTCAGGCTTGGAGGAGGAAATCCGGGGTACATCTCTCTCTCGGTCATCCCGAGTTTCTAATATCAAATAACACGACTATACAAAATATGTCTAATAATTGGTTTCAAACTCCAATGCAAGTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

784

Amino Acids

91.41

Weight (kDa)

8.85

Isoelectric Point (pI)

49.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 37 - 126 3.2e-23 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 217 - 329 1.1e-11 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 248 - 342 1.7e-29 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000414)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g15941 FvH4_1g22181 FvH4_3g31442 FvH4_4g06832 FvH4_5g15722 FvH4_6g30661 FvH4_7g13761
rosa_chinensis RchiOBHm_Chr3g0478271 RchiOBHm_Chr4g0421141
rosa_laevigata RLG00000002038 RLG00000016047 RLG00000021902 RLG00000024696 RLG00000027779 RLG00000033727 RLG00000035621
rosa_multiflora Rmu_sc0000125.1_g000007 Rmu_sc0000221.1_g000019 Rmu_sc0000221.1_g000020 Rmu_sc0000338.1_g000006 Rmu_sc0000429.1_g000059 Rmu_sc0000429.1_g000060 Rmu_sc0000429.1_g000061 Rmu_sc0000543.1_g000046 Rmu_sc0000689.1_g000008 Rmu_sc0000689.1_g000009 Rmu_sc0001436.1_g000002 Rmu_sc0001634.1_g000004 Rmu_sc0001782.1_g000025 Rmu_sc0002206.1_g000012 Rmu_sc0002985.1_g000008 Rmu_sc0002985.1_g000009 Rmu_sc0003044.1_g000040 Rmu_sc0003044.1_g000041 Rmu_sc0003044.1_g000042 Rmu_sc0003275.1_g000010 Rmu_sc0003561.1_g000002 Rmu_sc0003850.1_g000001 Rmu_sc0003850.1_g000002 Rmu_sc0004092.1_g000039 Rmu_sc0004311.1_g000003 Rmu_sc0004443.1_g000016 Rmu_sc0004542.1_g000002 Rmu_sc0004873.1_g000001 Rmu_sc0005757.1_g000002 Rmu_sc0005964.1_g000004 Rmu_sc0006598.1_g000014 Rmu_sc0006598.1_g000015 Rmu_sc0006889.1_g000023 Rmu_sc0007059.1_g000007 Rmu_sc0007390.1_g000014 Rmu_sc0008085.1_g000015 Rmu_sc0009948.1_g000001 Rmu_sc0010235.1_g000005 Rmu_sc0010665.1_g000022 Rmu_sc0011183.1_g000001 Rmu_sc0021637.1_g000001 Rmu_ssc0000242.1_g000016 Rmu_ssc0000317.1_g000003 Rmu_ssc0000317.1_g000004 Rmu_ssc0000432.1_g000093 Rmu_ssc0000432.1_g000095
rosa_roxburghii Rroxscaffold_1G00024670 Rroxscaffold_1G00047120 Rroxscaffold_4G00283230 Rroxscaffold_5G00365300 Rroxscaffold_7G00192220
rosa_rugosa Rorug03G0325200 Rorug06G0093800 Rorug07G0209800
rosa_samantha Rh1AG084000 Rh1AG202300 Rh1AG294200 Rh1BG259000 Rh2AG357500 Rh2AG389500 Rh2CG376700 Rh2CG468700 Rh2DG441200 Rh2DG504700 Rh2DG505700 Rh3BG359700 Rh3DG120200 Rh4BG161300 Rh4CG087000 Rh5BG550100 Rh5CG573000 Rh6AG284900 Rh6AG426700 Rh7DG285400
rosa_wichuraiana Rw1G030090 Rw2G030600 Rw3G018220 Rw3G027930 Rw4G000900 Rw6G003680 Rw6G036920 Rw6G043190 Rw7G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 497
Acc36I ACCTGC 1 cut(s) 497
AccI GTMKAC 1 cut(s) 530
AccII CGCG 1 cut(s) 822
AciI CCGC 3 cut(s) 291, 820, 2201
AclWI GGATC 4 cut(s) 225, 1076, 1491, 1815
AcoI YGGCCR 2 cut(s) 727, 2202
AcsI RAATTY 3 cut(s) 40, 1701, 1779
AcuI CTGAAG 2 cut(s) 1381, 2054
AfaI GTAC 3 cut(s) 420, 1817, 2256
AfiI CCNNNNNNNGG 5 cut(s) 74, 377, 736, 1842, 2191
AflIII ACRYGT 1 cut(s) 973
AjuI GAANNNNNNNTTGG 3 cut(s) 32, 64, 2332
AloI GAACNNNNNNTCC 2 cut(s) 373, 405
Alw21I GWGCWC 3 cut(s) 298, 363, 1162
Alw26I GTCTC 7 cut(s) 152, 269, 562, 818, 884, 1618, 2213
AlwI GGATC 4 cut(s) 225, 1076, 1491, 1815
Ama87I CYCGRG 1 cut(s) 2276
AoxI GGCC 3 cut(s) 727, 1281, 2202
ApeKI GCWGC 3 cut(s) 101, 950, 1801
ApoI RAATTY 3 cut(s) 40, 1701, 1779
ArsI GACNNNNNNTTYG 2 cut(s) 2062, 2094
Asp700I GAANNNNTTC 3 cut(s) 225, 1476, 1755
AspS9I GGNCC 2 cut(s) 1672, 1731
AsuC2I CCSGG 1 cut(s) 2251
AsuHPI GGTGA 2 cut(s) 809, 2029
AvaI CYCGRG 1 cut(s) 2276
AvaII GGWCC 2 cut(s) 1672, 1731
BalI TGGCCA 1 cut(s) 729
BarI GAAGNNNNNNTAC 2 cut(s) 1917, 1949
BauI CACGAG 1 cut(s) 1161
BbsI GAAGAC 1 cut(s) 1932
Bbv12I GWGCWC 3 cut(s) 298, 363, 1162
BbvI GCAGC 3 cut(s) 113, 937, 1813
BccI CCATC 5 cut(s) 487, 1339, 1529, 1559, 1722
BceAI ACGGC 1 cut(s) 2081
BclI TGATCA 2 cut(s) 255, 714
BcnI CCSGG 1 cut(s) 2251
BcoDI GTCTC 7 cut(s) 152, 269, 562, 818, 884, 1618, 2213
BfaI CTAG 5 cut(s) 69, 1575, 1743, 2052, 2124
BfmI CTRYAG 1 cut(s) 21
BfuAI ACCTGC 1 cut(s) 497
BisI GCNGC 4 cut(s) 102, 951, 1802, 2202
BlsI GCNGC 4 cut(s) 103, 952, 1803, 2203
Bme1390I CCNGG 1 cut(s) 2251
Bme18I GGWCC 2 cut(s) 1672, 1731
BmeT110I CYCGRG 1 cut(s) 2276
BmgT120I GGNCC 2 cut(s) 1672, 1731
BmiI GGNNCC 1 cut(s) 921
BmrFI CCNGG 1 cut(s) 2251
BmsI GCATC 6 cut(s) 508, 694, 937, 1008, 1677, 2179
BpiI GAAGAC 1 cut(s) 1932
Bpu10I CCTNAGC 1 cut(s) 1707
BpuEI CTTGAG 1 cut(s) 414
BpuMI CCSGG 1 cut(s) 2251
BsaBI GATNNNNATC 2 cut(s) 990, 1691
BsaI GGTCTC 1 cut(s) 2213
BsaJI CCNNGG 1 cut(s) 2250
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 377, 736, 1842, 2191
Bse1I ACTGG 1 cut(s) 2164
Bse3DI GCAATG 3 cut(s) 912, 960, 1896
Bse8I GATNNNNATC 2 cut(s) 990, 1691
BseDI CCNNGG 1 cut(s) 2250
BseGI GGATG 7 cut(s) 367, 547, 745, 1350, 1496, 1966, 2272
BseJI GATNNNNATC 2 cut(s) 990, 1691
BseLI CCNNNNNNNGG 5 cut(s) 74, 377, 736, 1842, 2191
BseMI GCAATG 3 cut(s) 912, 960, 1896
BseMII CTCAG 2 cut(s) 1253, 1698
BseNI ACTGG 1 cut(s) 2164
BseRI GAGGAG 3 cut(s) 689, 1121, 2254
BseX3I CGGCCG 1 cut(s) 2202
BseXI GCAGC 3 cut(s) 113, 937, 1813
Bsh1236I CGCG 1 cut(s) 822
Bsh1285I CGRYCG 1 cut(s) 2205
BshFI GGCC 3 cut(s) 729, 1283, 2204
BsiEI CGRYCG 1 cut(s) 2205
BsiHKAI GWGCWC 3 cut(s) 298, 363, 1162
BsiHKCI CYCGRG 1 cut(s) 2276
BsiSI CCGG 2 cut(s) 2205, 2250
BslFI GGGAC 1 cut(s) 2043
BslI CCNNNNNNNGG 5 cut(s) 74, 377, 736, 1842, 2191
BsmAI GTCTC 7 cut(s) 152, 269, 562, 818, 884, 1618, 2213
BsmFI GGGAC 1 cut(s) 2043
BsmI GAATGC 2 cut(s) 1954, 2026
BsnI GGCC 3 cut(s) 729, 1283, 2204
Bso31I GGTCTC 1 cut(s) 2213
BsoBI CYCGRG 1 cut(s) 2276
Bsp1286I GDGCHC 3 cut(s) 298, 363, 1162
Bsp143I GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
BspACI CCGC 3 cut(s) 291, 820, 2201
BspANI GGCC 3 cut(s) 729, 1283, 2204
BspCNI CTCAG 2 cut(s) 1254, 1699
BspFNI CGCG 1 cut(s) 822
BspLI GGNNCC 1 cut(s) 921
BspMI ACCTGC 1 cut(s) 497
BspPI GGATC 4 cut(s) 225, 1076, 1491, 1815
BspQI GCTCTTC 2 cut(s) 351, 972
BspTNI GGTCTC 1 cut(s) 2213
BsrDI GCAATG 3 cut(s) 912, 960, 1896
BsrI ACTGG 1 cut(s) 2164
BssECI CCNNGG 1 cut(s) 2250
BssMI GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
BssNAI GTATAC 1 cut(s) 531
BssSI CACGAG 1 cut(s) 1161
Bst1107I GTATAC 1 cut(s) 531
Bst2BI CACGAG 1 cut(s) 1161
Bst4CI ACNGT 5 cut(s) 1555, 1938, 2150, 2194, 2224
Bst6I CTCTTC 5 cut(s) 351, 508, 972, 1441, 1586
BstAPI GCANNNNNTGC 1 cut(s) 1018
BstC8I GCNNGC 3 cut(s) 504, 1230, 1806
BstDEI CTNAG 6 cut(s) 448, 1262, 1458, 1676, 1707, 1794
BstENI CCTNNNNNAGG 2 cut(s) 72, 1840
BstF5I GGATG 7 cut(s) 367, 547, 745, 1350, 1496, 1966, 2272
BstFNI CGCG 1 cut(s) 822
BstKTI GATC 9 cut(s) 233, 258, 563, 625, 717, 943, 1071, 1486, 1823
BstMAI GTCTC 7 cut(s) 152, 269, 562, 818, 884, 1618, 2213
BstMBI GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
BstMCI CGRYCG 1 cut(s) 2205
BstMWI GCNNNNNNNGC 5 cut(s) 406, 956, 1018, 1136, 1238
BstNSI RCATGY 5 cut(s) 400, 977, 1424, 1768, 1901
BstSCI CCNGG 1 cut(s) 2249
BstSFI CTRYAG 1 cut(s) 21
BstUI CGCG 1 cut(s) 822
BstV1I GCAGC 3 cut(s) 113, 937, 1813
BstV2I GAAGAC 1 cut(s) 1932
BstX2I RGATCY 1 cut(s) 1820
BstYI RGATCY 1 cut(s) 1820
BstZ17I GTATAC 1 cut(s) 531
BstZI CGGCCG 1 cut(s) 2202
BsuRI GGCC 3 cut(s) 729, 1283, 2204
BtgZI GCGATG 1 cut(s) 2141
BtsCI GGATG 7 cut(s) 367, 547, 745, 1350, 1496, 1966, 2272
BveI ACCTGC 1 cut(s) 497
Cac8I GCNNGC 3 cut(s) 504, 1230, 1806
Cfr13I GGNCC 2 cut(s) 1672, 1731
Csp6I GTAC 3 cut(s) 419, 1816, 2255
CviQI GTAC 3 cut(s) 419, 1816, 2255
DdeI CTNAG 6 cut(s) 448, 1262, 1458, 1676, 1707, 1794
DpnI GATC 9 cut(s) 232, 257, 562, 624, 716, 942, 1070, 1485, 1822
DpnII GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
EaeI YGGCCR 2 cut(s) 727, 2202
EagI CGGCCG 1 cut(s) 2202
Eam1104I CTCTTC 5 cut(s) 351, 508, 972, 1441, 1586
EarI CTCTTC 5 cut(s) 351, 508, 972, 1441, 1586
EclXI CGGCCG 1 cut(s) 2202
Eco31I GGTCTC 1 cut(s) 2213
Eco32I GATATC 1 cut(s) 1848
Eco47I GGWCC 2 cut(s) 1672, 1731
Eco52I CGGCCG 1 cut(s) 2202
Eco57I CTGAAG 2 cut(s) 1381, 2054
Eco88I CYCGRG 1 cut(s) 2276
EcoNI CCTNNNNNAGG 2 cut(s) 72, 1840
EcoO109I RGGNCCY 1 cut(s) 1672
EcoRI GAATTC 1 cut(s) 40
EcoRV GATATC 1 cut(s) 1848
EcoT22I ATGCAT 2 cut(s) 1422, 1770
FaqI GGGAC 1 cut(s) 2043
FauNDI CATATG 1 cut(s) 1014
FbaI TGATCA 2 cut(s) 255, 714
FblI GTMKAC 1 cut(s) 530
Fnu4HI GCNGC 4 cut(s) 102, 951, 1802, 2202
FokI GGATG 7 cut(s) 354, 554, 752, 1357, 1483, 1973, 2259
Fsp4HI GCNGC 4 cut(s) 102, 951, 1802, 2202
FspBI CTAG 5 cut(s) 69, 1575, 1743, 2052, 2124
GluI GCNGC 4 cut(s) 102, 951, 1802, 2202
HaeIII GGCC 3 cut(s) 729, 1283, 2204
HapII CCGG 2 cut(s) 2205, 2250
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HindIII AAGCTT 2 cut(s) 577, 1506
HpaI GTTAAC 1 cut(s) 772
HpaII CCGG 2 cut(s) 2205, 2250
HphI GGTGA 2 cut(s) 809, 2029
Hpy166II GTNNAC 3 cut(s) 531, 772, 1453
Hpy188I TCNGA 8 cut(s) 46, 260, 622, 1306, 1321, 1413, 1864, 1942
Hpy8I GTNNAC 3 cut(s) 531, 772, 1453
HpyAV CCTTC 6 cut(s) 147, 215, 414, 566, 651, 1055
HpyCH4III ACNGT 5 cut(s) 1555, 1938, 2150, 2194, 2224
HpyF10VI GCNNNNNNNGC 5 cut(s) 406, 956, 1018, 1136, 1238
HpyF3I CTNAG 6 cut(s) 448, 1262, 1458, 1676, 1707, 1794
Ksp22I TGATCA 2 cut(s) 255, 714
KspAI GTTAAC 1 cut(s) 772
Kzo9I GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
LguI GCTCTTC 2 cut(s) 351, 972
LmnI GCTCC 2 cut(s) 676, 925
Lsp1109I GCAGC 3 cut(s) 113, 937, 1813
LweI GCATC 6 cut(s) 508, 694, 937, 1008, 1677, 2179
MaeI CTAG 5 cut(s) 69, 1575, 1743, 2052, 2124
MaeIII GTNAC 5 cut(s) 340, 472, 1163, 1348, 1568
MalI GATC 9 cut(s) 232, 257, 562, 624, 716, 942, 1070, 1485, 1822
MboI GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
MfeI CAATTG 1 cut(s) 2081
MflI RGATCY 1 cut(s) 1820
MhlI GDGCHC 3 cut(s) 298, 363, 1162
MlsI TGGCCA 1 cut(s) 729
MluNI TGGCCA 1 cut(s) 729
MlyI GAGTC 4 cut(s) 154, 419, 1295, 2086
MmeI TCCRAC 1 cut(s) 36
Mox20I TGGCCA 1 cut(s) 729
Mph1103I ATGCAT 2 cut(s) 1422, 1770
MroXI GAANNNNTTC 3 cut(s) 225, 1476, 1755
MscI TGGCCA 1 cut(s) 729
MseI TTAA 7 cut(s) 309, 771, 1178, 1196, 1224, 1275, 1721
MslI CAYNNNNRTG 2 cut(s) 877, 1773
Msp20I TGGCCA 1 cut(s) 729
MspA1I CMGCKG 2 cut(s) 866, 1241
MspI CCGG 2 cut(s) 2205, 2250
MspR9I CCNGG 1 cut(s) 2251
MunI CAATTG 1 cut(s) 2081
Mva1269I GAATGC 2 cut(s) 1954, 2026
MvnI CGCG 1 cut(s) 822
MwoI GCNNNNNNNGC 5 cut(s) 406, 956, 1018, 1136, 1238
NciI CCSGG 1 cut(s) 2251
NdeI CATATG 1 cut(s) 1014
NdeII GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
NlaIV GGNNCC 1 cut(s) 921
NmeAIII GCCGAG 1 cut(s) 1259
NmuCI GTSAC 2 cut(s) 472, 1163
NsiI ATGCAT 2 cut(s) 1422, 1770
NspI RCATGY 5 cut(s) 400, 977, 1424, 1768, 1901
PaqCI CACCTGC 1 cut(s) 497
PciI ACATGT 1 cut(s) 973
PciSI GCTCTTC 2 cut(s) 351, 972
PcsI WCGNNNNNNNCGW 1 cut(s) 2274
PctI GAATGC 2 cut(s) 1954, 2026
PdmI GAANNNNTTC 3 cut(s) 225, 1476, 1755
PfeI GAWTC 7 cut(s) 458, 807, 869, 986, 1493, 2045, 2070
PkrI GCNGC 4 cut(s) 103, 952, 1803, 2203
PleI GAGTC 4 cut(s) 154, 419, 1295, 2085
PpsI GAGTC 4 cut(s) 154, 419, 1295, 2085
PpuMI RGGWCCY 1 cut(s) 1672
PscI ACATGT 1 cut(s) 973
Psp5II RGGWCCY 1 cut(s) 1672
PspN4I GGNNCC 1 cut(s) 921
PspPI GGNCC 2 cut(s) 1672, 1731
PspPPI RGGWCCY 1 cut(s) 1672
PsuI RGATCY 1 cut(s) 1820
PvuII CAGCTG 2 cut(s) 866, 1241
RsaI GTAC 3 cut(s) 420, 1817, 2256
RsaNI GTAC 3 cut(s) 419, 1816, 2255
RseI CAYNNNNRTG 2 cut(s) 877, 1773
SapI GCTCTTC 2 cut(s) 351, 972
SaqAI TTAA 7 cut(s) 309, 771, 1178, 1196, 1224, 1275, 1721
SatI GCNGC 4 cut(s) 102, 951, 1802, 2202
Sau3AI GATC 9 cut(s) 230, 255, 560, 622, 714, 940, 1068, 1483, 1820
Sau96I GGNCC 2 cut(s) 1672, 1731
SchI GAGTC 4 cut(s) 154, 419, 1295, 2086
ScrFI CCNGG 1 cut(s) 2251
SduI GDGCHC 3 cut(s) 298, 363, 1162
SfaNI GCATC 6 cut(s) 508, 694, 937, 1008, 1677, 2179
SfcI CTRYAG 1 cut(s) 21
SinI GGWCC 2 cut(s) 1672, 1731
SmiMI CAYNNNNRTG 2 cut(s) 877, 1773
SmlI CTYRAG 1 cut(s) 429
SmoI CTYRAG 1 cut(s) 429
SsiI CCGC 3 cut(s) 291, 820, 2201
SspI AATATT 4 cut(s) 614, 933, 1102, 1295
SspMI CTAG 5 cut(s) 69, 1575, 1743, 2052, 2124
StyD4I CCNGG 1 cut(s) 2249
TaaI ACNGT 5 cut(s) 1555, 1938, 2150, 2194, 2224
TaqI TCGA 4 cut(s) 229, 559, 784, 970
TaqII GACCGA 1 cut(s) 2258
TatI WGTACW 1 cut(s) 418
TauI GCSGC 1 cut(s) 2204
TfiI GAWTC 7 cut(s) 458, 807, 869, 986, 1493, 2045, 2070
Tru1I TTAA 7 cut(s) 309, 771, 1178, 1196, 1224, 1275, 1721
Tru9I TTAA 7 cut(s) 309, 771, 1178, 1196, 1224, 1275, 1721
TseFI GTSAC 2 cut(s) 472, 1163
TseI GCWGC 3 cut(s) 101, 950, 1801
Tsp45I GTSAC 2 cut(s) 472, 1163
TspGWI ACGGA 2 cut(s) 427, 1206
VpaK11BI GGWCC 2 cut(s) 1672, 1731
XagI CCTNNNNNAGG 2 cut(s) 72, 1840
XapI RAATTY 3 cut(s) 40, 1701, 1779
XbaI TCTAGA 2 cut(s) 1574, 2051
XceI RCATGY 5 cut(s) 400, 977, 1424, 1768, 1901
XmiI GTMKAC 1 cut(s) 530
XmnI GAANNNNTTC 3 cut(s) 225, 1476, 1755
XspI CTAG 5 cut(s) 69, 1575, 1743, 2052, 2124
Zsp2I ATGCAT 2 cut(s) 1422, 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.