AT5G47070
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
19118465 .. 19121103
2639 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G47070.1

Sequence Viewer

Length: 1233 bp
ATGAACTGTCTGTTCTTGTTCAAATCAAAGAAACCCAGAAAGCAACAGAAAGACAACAACAAGAACAAAAGAAAAGGTAAAGAGTTGTTACAAAACTCAGCTCCAGAACTGACGAATCGGAGTGAAACGTCTTCGTTTAATCTCCAGACACCAAGATCGTTGCCTTCTCCAAGAAGTATCAAAGATTTGTATACAGAGAGAGAACAAAATCTTAGGGTTTTTTCTTACGAAGAACTCAGTAAAGCCACTTATGTGTTTAGCAGAAAGCTTGTGATCGGTGAAGGTGGATTTGGTATTGTTTATAAAGGAAAGATTCTCAGCAATGGAGATTCTTCTGATCCTCCACTTGTCGTTGCCATCAAGAAACTCAATCGACAAGGTTTACAGGGTCACAAGCAATGGCTAGCAGAGGTTCAGTTTCTTGGAGTAGTGAATCATCCGAACGTTGTGAAGCTCATAGGTTATTGCTCGGAAGACGGCGAGACCGGGATCGAGAGGCTTTTGGTTTATGAGTACATGTCGAATCGAAGTTTAGAAGACCATCTCTTCCCTCGTCGATCACACACATTACCGTGGAAAAAAAGACTCGAGATCATGCTTGGTGCTGCTGAAGGATTGACTTATTTACATGATCTTAAGGTGATATATAGAGATTTCAAATCCTCTAATGTGCTTTTAGACGATCAATTCTGTCCAAAATTATCGGACTTTGGGCTTGCCAGAGAAGGACCTGATGGCGACAATACTCATGTCACTACCGCAAGAGTTGGAACACACGGCTATGCGGCTCCGGAATACGTGCAAACAGGTCATCTTCGGTTAAAGAGCGACGTCTATAGCTTCGGTGTTGTGCTCTACGAGATCATAACCGGACGCAGAACCATTGAGAGGAACAAGCCAGTGGCTGAACGAAGGCTATTGGATTGGGTCAAAGAGTATCCTGCTGATAGTCAACGTTTCAGCATGATCGTTGACCCTCGGTTACGCAACAATTATCCAGCTGCTGGAGCTAGGAGTTTGGCTAAATTGGCTGATCTTTGCCTGAAAAAGAACGATAAAGAGCGACCTACGATGGAAATTGTAGTGGAAAGATTGAAAAAGATTATCGAAGAATCGGATAGTGAAGATTATCCGATGGCTACGACTACGACCAAGGAAAGTAGTCAGGTAAGGAGGAGACAAGTTGCAAAACCTGAGAAACAAAGTTTGAGAGGGGTTAGTGTCAGAGGATGA

Protein Analysis

410

Amino Acids

46.82

Weight (kDa)

9.57

Isoelectric Point (pI)

49.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 88 - 362 9.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 91 - 365 6.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000416)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G47070
fragaria_vesca FvH4_5g20770 FvH4_5g20770 FvH4_5g20770 FvH4_5g20770 FvH4_7g08930 FvH4_7g08930 FvH4_7g08930 FvH4_7g08930 FvH4_7g08930
malus_domestica MD02G1222400.v1.1 MD04G1053100.v1.1 MD06G1044400.v1.1 MD07G1093200.v1.1
prunus_persica Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.5G052200_v2.0.a1 Prupe.5G052200_v2.0.a1
pyrus_communis pycom02g18890 pycom04g04660 pycom06g03780 pycom07g07640
rosa_chinensis RchiOBHm_Chr0c22g0500461 RchiOBHm_Chr0c22g0500491 RchiOBHm_Chr0c22g0500531 RchiOBHm_Chr0c22g0500541 RchiOBHm_Chr0c22g0500641 RchiOBHm_Chr0c22g0500691 RchiOBHm_Chr1g0344381 RchiOBHm_Chr6g0259661 RchiOBHm_Chr6g0259701 RchiOBHm_Chr7g0205471 RchiOBHm_Chr7g0206561 RchiOBHm_Chr7g0206611 RchiOBHm_Chr7g0206731 RchiOBHm_Chr7g0206741 RchiOBHm_Chr7g0206781 RchiOBHm_Chr7g0206801 RchiOBHm_Chr7g0206811 RchiOBHm_Chr7g0206831 RchiOBHm_Chr7g0206861 RchiOBHm_Chr7g0206891 RchiOBHm_Chr7g0206981 RchiOBHm_Chr7g0206991 RchiOBHm_Chr7g0207071 RchiOBHm_Chr7g0207121 RchiOBHm_Chr7g0207151 RchiOBHm_Chr7g0207181 RchiOBHm_Chr7g0207241 RchiOBHm_Chr7g0207251 RchiOBHm_Chr7g0207261 RchiOBHm_Chr7g0207411 RchiOBHm_Chr7g0207471 RchiOBHm_Chr7g0207701
rosa_laevigata RLG00000003296 RLG00000003302 RLG00000003326 RLG00000003346 RLG00000028901
rosa_multiflora Rmu_sc0000536.1_g000001 Rmu_sc0000536.1_g000002 Rmu_sc0004987.1_g000003 Rmu_sc0008509.1_g000002 Rmu_sc0008509.1_g000029 Rmu_sc0012558.1_g000001 Rmu_sc0013160.1_g000002 Rmu_sc0014912.1_g000004
rosa_roxburghii Rroxscaffold_3G00251310 Rroxscaffold_3G00251320 Rroxscaffold_3G00251410 Rroxscaffold_3G00252190 Rroxscaffold_4G00309810 Rroxscaffold_7G00206970 Rroxscaffold_7G00207090
rosa_rugosa Rorug01G0173500 Rorug01G0173600 Rorug05G0590200 Rorug07G0096400 Rorug07G0096700 Rorug07G0096900 Rorug07G0098500 Rorug07G0099000
rosa_samantha Rh1AG189700 Rh1BG156700 Rh1DG188100 Rh7BG221600 Rh7BG225000 Rh7BG225300 Rh7BG227500 Rh7BG227700 Rh7CG244800
rosa_wichuraiana Rw1G015650 Rw6G009210 Rw7G019820 Rw7G019850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AatII GACGTC 1 cut(s) 834
AccB7I CCANNNNNTGG 1 cut(s) 1004
AccI GTMKAC 1 cut(s) 191
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 2 cut(s) 759, 785
AclI AACGTT 2 cut(s) 444, 955
AclWI GGATC 2 cut(s) 332, 497
AcuI CTGAAG 1 cut(s) 630
AcyI GRCGYC 1 cut(s) 831
AfaI GTAC 1 cut(s) 515
AfiI CCNNNNNNNGG 2 cut(s) 888, 1004
AflII CTTAAG 1 cut(s) 635
AflIII ACRYGT 1 cut(s) 516
AgsI TTSAA 3 cut(s) 22, 658, 1096
AjuI GAANNNNNNNTTGG 2 cut(s) 273, 305
AleI CACNNNNGTG 1 cut(s) 251
AluBI AGCT 6 cut(s) 101, 268, 454, 840, 1001, 1010
AluI AGCT 6 cut(s) 101, 268, 454, 840, 1001, 1010
Alw21I GWGCWC 1 cut(s) 855
Alw26I GTCTC 2 cut(s) 476, 1171
AlwI GGATC 2 cut(s) 332, 497
AlwNI CAGNNNCTG 2 cut(s) 905, 1004
Ama87I CYCGRG 1 cut(s) 587
Aor13HI TCCGGA 1 cut(s) 790
ApeKI GCWGC 2 cut(s) 605, 1001
AspS9I GGNCC 1 cut(s) 728
AsuC2I CCSGG 1 cut(s) 487
AsuHPI GGTGA 2 cut(s) 290, 652
AsuNHI GCTAGC 1 cut(s) 403
AvaI CYCGRG 1 cut(s) 587
AvaII GGWCC 1 cut(s) 728
BbsI GAAGAC 3 cut(s) 123, 480, 543
Bbv12I GWGCWC 1 cut(s) 855
BbvI GCAGC 2 cut(s) 592, 988
BccI CCATC 5 cut(s) 365, 549, 728, 1066, 1129
BceAI ACGGC 2 cut(s) 493, 793
BciVI GTATCC 1 cut(s) 948
BcnI CCSGG 1 cut(s) 487
BcoDI GTCTC 2 cut(s) 476, 1171
BfaI CTAG 2 cut(s) 404, 1011
BfmI CTRYAG 1 cut(s) 835
BfrI CTTAAG 1 cut(s) 635
BfuI GTATCC 1 cut(s) 948
BisI GCNGC 3 cut(s) 606, 786, 1002
BlsI GCNGC 3 cut(s) 607, 787, 1003
Bme1390I CCNGG 1 cut(s) 487
Bme18I GGWCC 1 cut(s) 728
BmeT110I CYCGRG 1 cut(s) 587
BmgT120I GGNCC 1 cut(s) 728
BmiI GGNNCC 1 cut(s) 789
BmrFI CCNGG 1 cut(s) 487
BmtI GCTAGC 1 cut(s) 407
BpiI GAAGAC 3 cut(s) 123, 480, 543
BpmI CTGGAG 3 cut(s) 87, 128, 1026
BpuMI CCSGG 1 cut(s) 487
BsaAI YACGTR 1 cut(s) 799
BsaHI GRCGYC 1 cut(s) 831
BsaI GGTCTC 1 cut(s) 476
BsaJI CCNNGG 3 cut(s) 572, 977, 1152
BsaWI WCCGGW 2 cut(s) 790, 869
Bsc4I CCNNNNNNNGG 2 cut(s) 888, 1004
Bse1I ACTGG 1 cut(s) 899
Bse3DI GCAATG 2 cut(s) 328, 404
BseAI TCCGGA 1 cut(s) 790
BseDI CCNNGG 3 cut(s) 572, 977, 1152
BseGI GGATG 1 cut(s) 436
BseLI CCNNNNNNNGG 2 cut(s) 888, 1004
BseMI GCAATG 2 cut(s) 328, 404
BseMII CTCAG 4 cut(s) 111, 250, 331, 1185
BseNI ACTGG 1 cut(s) 899
BseRI GAGGAG 1 cut(s) 1189
BseXI GCAGC 2 cut(s) 592, 988
BsiHKAI GWGCWC 1 cut(s) 855
BsiHKCI CYCGRG 1 cut(s) 587
BsiSI CCGG 3 cut(s) 486, 791, 870
BslI CCNNNNNNNGG 2 cut(s) 888, 1004
BsmAI GTCTC 2 cut(s) 476, 1171
Bso31I GGTCTC 1 cut(s) 476
BsoBI CYCGRG 1 cut(s) 587
Bsp1286I GDGCHC 1 cut(s) 855
Bsp13I TCCGGA 1 cut(s) 790
BspACI CCGC 2 cut(s) 759, 785
BspCNI CTCAG 4 cut(s) 110, 249, 330, 1186
BspEI TCCGGA 1 cut(s) 790
BspLI GGNNCC 1 cut(s) 789
BspOI GCTAGC 1 cut(s) 407
BspPI GGATC 2 cut(s) 332, 497
BspTI CTTAAG 1 cut(s) 635
BspTNI GGTCTC 1 cut(s) 476
BsrDI GCAATG 2 cut(s) 328, 404
BsrI ACTGG 1 cut(s) 899
BssECI CCNNGG 3 cut(s) 572, 977, 1152
BssNAI GTATAC 1 cut(s) 192
BssNI GRCGYC 1 cut(s) 831
BssT1I CCWWGG 1 cut(s) 1152
Bst1107I GTATAC 1 cut(s) 192
Bst4CI ACNGT 2 cut(s) 8, 573
Bst6I CTCTTC 1 cut(s) 551
BstACI GRCGYC 1 cut(s) 831
BstAFI CTTAAG 1 cut(s) 635
BstBAI YACGTR 1 cut(s) 799
BstC8I GCNNGC 2 cut(s) 405, 717
BstDEI CTNAG 5 cut(s) 97, 212, 236, 317, 1194
BstDSI CCRYGG 1 cut(s) 572
BstF5I GGATG 1 cut(s) 436
BstMAI GTCTC 2 cut(s) 476, 1171
BstMWI GCNNNNNNNGC 2 cut(s) 1007, 1028
BstNSI RCATGY 1 cut(s) 520
BstSCI CCNGG 1 cut(s) 485
BstSFI CTRYAG 1 cut(s) 835
BstV1I GCAGC 2 cut(s) 592, 988
BstV2I GAAGAC 3 cut(s) 123, 480, 543
BstZ17I GTATAC 1 cut(s) 192
BsuI GTATCC 1 cut(s) 948
BtgI CCRYGG 1 cut(s) 572
BtsCI GGATG 1 cut(s) 436
BtsIMutI CAGTG 1 cut(s) 906
Cac8I GCNNGC 2 cut(s) 405, 717
CaiI CAGNNNCTG 2 cut(s) 905, 1004
Cfr13I GGNCC 1 cut(s) 728
CseI GACGC 1 cut(s) 882
Csp6I GTAC 1 cut(s) 514
CviAII CATG 5 cut(s) 517, 595, 629, 749, 964
CviQI GTAC 1 cut(s) 514
DdeI CTNAG 5 cut(s) 97, 212, 236, 317, 1194
Eam1104I CTCTTC 1 cut(s) 551
EarI CTCTTC 1 cut(s) 551
Eco130I CCWWGG 1 cut(s) 1152
Eco31I GGTCTC 1 cut(s) 476
Eco47I GGWCC 1 cut(s) 728
Eco57I CTGAAG 1 cut(s) 630
Eco88I CYCGRG 1 cut(s) 587
EcoO109I RGGNCCY 1 cut(s) 728
EcoT14I CCWWGG 1 cut(s) 1152
ErhI CCWWGG 1 cut(s) 1152
FaeI CATG 5 cut(s) 520, 598, 632, 752, 967
FatI CATG 5 cut(s) 516, 594, 628, 748, 963
FblI GTMKAC 1 cut(s) 191
Fnu4HI GCNGC 3 cut(s) 606, 786, 1002
FokI GGATG 1 cut(s) 423
Fsp4HI GCNGC 3 cut(s) 606, 786, 1002
FspBI CTAG 2 cut(s) 404, 1011
GluI GCNGC 3 cut(s) 606, 786, 1002
GsuI CTGGAG 3 cut(s) 87, 128, 1026
HapII CCGG 3 cut(s) 486, 791, 870
HgaI GACGC 1 cut(s) 882
Hin1I GRCGYC 1 cut(s) 831
Hin1II CATG 5 cut(s) 520, 598, 632, 752, 967
HincII GTYRAC 2 cut(s) 953, 973
HindII GTYRAC 2 cut(s) 953, 973
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 7 cut(s) 115, 313, 329, 433, 523, 585, 1112
HpaII CCGG 3 cut(s) 486, 791, 870
HphI GGTGA 2 cut(s) 290, 652
Hpy166II GTNNAC 4 cut(s) 192, 383, 953, 973
Hpy188I TCNGA 8 cut(s) 120, 337, 441, 472, 706, 1117, 1134, 1226
Hpy188III TCNNGA 6 cut(s) 104, 145, 361, 493, 589, 791
Hpy8I GTNNAC 4 cut(s) 192, 383, 953, 973
Hpy99I CGWCG 2 cut(s) 558, 833
HpyAV CCTTC 5 cut(s) 174, 275, 605, 719, 906
HpyCH4III ACNGT 2 cut(s) 8, 573
HpyCH4IV ACGT 5 cut(s) 128, 444, 798, 831, 955
HpyCH4V TGCA 2 cut(s) 802, 1187
HpyF10VI GCNNNNNNNGC 2 cut(s) 1007, 1028
HpyF3I CTNAG 5 cut(s) 97, 212, 236, 317, 1194
HpySE526I ACGT 5 cut(s) 128, 444, 798, 831, 955
Hsp92I GRCGYC 1 cut(s) 831
Hsp92II CATG 5 cut(s) 520, 598, 632, 752, 967
Kpn2I TCCGGA 1 cut(s) 790
LmnI GCTCC 3 cut(s) 106, 793, 1007
Lsp1109I GCAGC 2 cut(s) 592, 988
MaeI CTAG 2 cut(s) 404, 1011
MaeII ACGT 5 cut(s) 128, 444, 798, 831, 955
MaeIII GTNAC 4 cut(s) 87, 389, 751, 981
MboII GAAGA 9 cut(s) 123, 242, 324, 485, 538, 548, 806, 1121, 1136
MhlI GDGCHC 1 cut(s) 855
MluCI AATT 5 cut(s) 686, 698, 991, 1025, 1077
MlyI GAGTC 1 cut(s) 579
MmeI TCCRAC 1 cut(s) 748
MroI TCCGGA 1 cut(s) 790
MseI TTAA 3 cut(s) 138, 636, 821
MslI CAYNNNNRTG 3 cut(s) 251, 571, 780
MspA1I CMGCKG 1 cut(s) 1001
MspCI CTTAAG 1 cut(s) 635
MspI CCGG 3 cut(s) 486, 791, 870
MspR9I CCNGG 1 cut(s) 487
MwoI GCNNNNNNNGC 2 cut(s) 1007, 1028
NciI CCSGG 1 cut(s) 487
NheI GCTAGC 1 cut(s) 403
NlaIII CATG 5 cut(s) 520, 598, 632, 752, 967
NlaIV GGNNCC 1 cut(s) 789
NmuCI GTSAC 2 cut(s) 389, 751
NspI RCATGY 1 cut(s) 520
OliI CACNNNNGTG 1 cut(s) 251
PaeR7I CTCGAG 1 cut(s) 587
PciI ACATGT 1 cut(s) 516
PfeI GAWTC 6 cut(s) 115, 313, 329, 433, 523, 1112
PflMI CCANNNNNTGG 1 cut(s) 1004
PkrI GCNGC 3 cut(s) 607, 787, 1003
PleI GAGTC 1 cut(s) 579
PpsI GAGTC 1 cut(s) 579
Ppu21I YACGTR 1 cut(s) 799
PpuMI RGGWCCY 1 cut(s) 728
PscI ACATGT 1 cut(s) 516
PsiI TTATAA 1 cut(s) 303
Psp1406I AACGTT 2 cut(s) 444, 955
Psp5II RGGWCCY 1 cut(s) 728
PspN4I GGNNCC 1 cut(s) 789
PspPI GGNCC 1 cut(s) 728
PspPPI RGGWCCY 1 cut(s) 728
PstNI CAGNNNCTG 2 cut(s) 905, 1004
PvuII CAGCTG 1 cut(s) 1001
RsaI GTAC 1 cut(s) 515
RsaNI GTAC 1 cut(s) 514
RseI CAYNNNNRTG 3 cut(s) 251, 571, 780
SaqAI TTAA 3 cut(s) 138, 636, 821
SatI GCNGC 3 cut(s) 606, 786, 1002
Sau96I GGNCC 1 cut(s) 728
SchI GAGTC 1 cut(s) 579
ScrFI CCNGG 1 cut(s) 487
SduI GDGCHC 1 cut(s) 855
SfcI CTRYAG 1 cut(s) 835
Sfr274I CTCGAG 1 cut(s) 587
SinI GGWCC 1 cut(s) 728
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 3 cut(s) 251, 571, 780
SmlI CTYRAG 2 cut(s) 587, 635
SmoI CTYRAG 2 cut(s) 587, 635
Sse9I AATT 5 cut(s) 686, 698, 991, 1025, 1077
SsiI CCGC 2 cut(s) 759, 785
SspMI CTAG 2 cut(s) 404, 1011
StyD4I CCNGG 1 cut(s) 485
StyI CCWWGG 1 cut(s) 1152
TaaI ACNGT 2 cut(s) 8, 573
TaiI ACGT 5 cut(s) 131, 447, 801, 834, 958
TaqI TCGA 7 cut(s) 373, 492, 521, 526, 556, 588, 1107
TasI AATT 5 cut(s) 686, 698, 991, 1025, 1077
TatI WGTACW 1 cut(s) 513
TauI GCSGC 1 cut(s) 788
TfiI GAWTC 6 cut(s) 115, 313, 329, 433, 523, 1112
Tru1I TTAA 3 cut(s) 138, 636, 821
Tru9I TTAA 3 cut(s) 138, 636, 821
TscAI CASTG 1 cut(s) 906
TseFI GTSAC 2 cut(s) 389, 751
TseI GCWGC 2 cut(s) 605, 1001
Tsp45I GTSAC 2 cut(s) 389, 751
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 906
Van91I CCANNNNNTGG 1 cut(s) 1004
Vha464I CTTAAG 1 cut(s) 635
VpaK11BI GGWCC 1 cut(s) 728
XceI RCATGY 1 cut(s) 520
XhoI CTCGAG 1 cut(s) 587
XmiI GTMKAC 1 cut(s) 191
XspI CTAG 2 cut(s) 404, 1011
ZraI GACGTC 1 cut(s) 832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.