Rorug01G0173600
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000416
Physical Location & Seq
Reverse (-)
23655987 .. 23671239
15253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0173600.1

Sequence Viewer

Length: 1551 bp
ATGGTTTCAGAGTCGAGCAGCAGTACAAGTAGCTGCCCCATCAAAACGGTGGTGGTTTTGGTCCAAGAGAACCGCTCGTTCGACCACATGCTCGGGTGGATGAAGTCCCTAAACCCTGACATCAATGGCGTCACCGGTTCCGAATCCAACCTCATTTCCACCTCCGACCCTAACTCCAAACGTGTCTTCTTCGGCGAGAACTCCGCCTACGTCGATCCTGACCCAGGCCACTCCATCCAAGCTGTCTACGAGCAAGTCTTCGGCGAGCCATGGTCGGAGGCCTCTGAGTCCAAGAACCTCGCCCCAACAATGGAGGGTTTCGCTCAAAACGCCGAGACAACGCAGACGGGGTTGGCTGAGACGGTGATGAACGGGTTCAAGCCGGAGAACATTCCAGTGTATAGTGAGCTGGTGAAAGAGTTTGCAGTGTGTGACAGGTGGTTTGCTTCGGTGCCGGCGTCGACGCAGCCGAACCGGCAGTACGTGCACTCGGGGACGTCGCACGGACTTTCAGGGAATGATACGATCTTGCTGATTGAGGGGATGCCGCAGAAGACCATATTTGAGTCCGTGGAGGAAGCTGGTCACTCTTTCGGAATATACTATCAGACCCCTCCTGCCACACTTTTGTACAGGAATCTAAGAAAGTTGAAGTACATTGATCACTTCCATCAATTTGATCTACATTTTAAGAAGCATTGCGAGGAGGGCAAATTACCAAACTATACGGTTGTGGAACAAAGATTCTTCGATCTATTGTCCCTCCCTGCCAACGATGATCACCCGTCTCATGACGTCTCAGAGGGCCAGAAATTCGTAAAGCAAGTTTACGAAGCATTACGATCAAGTCCTCAGTGGAATGAAATGTTGTTCATAATTGTATACGACGAGCATGGCGGATTCTATGATCATGTTCCGACGCCTGTTAAAGATGTTCCTAGTCCTGATGACATCGCCGGTCCTGCGCCCTACAACTTTAAATTCGATCGTCTTGGTGTTAGGGTTCCGGCCTTCCTGATTTCTCCCTGGATTGAGCGTGCAACAGTGTTGCAAGGGCCTTCGGGGCCATATCCTTCATCAGAGTTTGAGCACTCCTCAATTGCAGCTACTGTTAAGAAGATTTTCAATCTAAAAGAGTTTCTCACAAAGCGTGATGCTTGGGCAGGAACCTTTGATGTTATTTTGACTAGAACAACTCCAAGAACTGATTGCCCAGTTACTTTACCCGAGCCAATCAAACTACGAGAAGCGGGATCTAAAGACGATGCAAAGATCAGCGACTTTCAAGAAGAACTAGTGCAATTGGCTGCAGCACTAAACGGGGATCACAGGAAGGATATATATCCCCACAAACTGGTTGAGAATATGACTGTTTCAGAGGCTCTCAAATATGTGGAAGGAGCGTTTAAAATATTTCAAGATGAATGTAAAAAAGCCCGGGAAAGTGGAACTGACGAATCTCAAATTATCATCTGCGCAACCTCTCCTACGCCGCAATCATCAAAGTCATTTATTCATAAGATATTCTCTTGTTTGGTTTGTGATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

516

Amino Acids

57.72

Weight (kDa)

5.27

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphoesterase PF04185 14 - 378 2.8e-105 Phosphoesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000416)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G47070
fragaria_vesca FvH4_5g20770 FvH4_5g20770 FvH4_5g20770 FvH4_5g20770 FvH4_7g08930 FvH4_7g08930 FvH4_7g08930 FvH4_7g08930 FvH4_7g08930
malus_domestica MD02G1222400.v1.1 MD04G1053100.v1.1 MD06G1044400.v1.1 MD07G1093200.v1.1
prunus_persica Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.2G118500_v2.0.a1 Prupe.5G052200_v2.0.a1 Prupe.5G052200_v2.0.a1
pyrus_communis pycom02g18890 pycom04g04660 pycom06g03780 pycom07g07640
rosa_chinensis RchiOBHm_Chr0c22g0500461 RchiOBHm_Chr0c22g0500491 RchiOBHm_Chr0c22g0500531 RchiOBHm_Chr0c22g0500541 RchiOBHm_Chr0c22g0500641 RchiOBHm_Chr0c22g0500691 RchiOBHm_Chr1g0344381 RchiOBHm_Chr6g0259661 RchiOBHm_Chr6g0259701 RchiOBHm_Chr7g0205471 RchiOBHm_Chr7g0206561 RchiOBHm_Chr7g0206611 RchiOBHm_Chr7g0206731 RchiOBHm_Chr7g0206741 RchiOBHm_Chr7g0206781 RchiOBHm_Chr7g0206801 RchiOBHm_Chr7g0206811 RchiOBHm_Chr7g0206831 RchiOBHm_Chr7g0206861 RchiOBHm_Chr7g0206891 RchiOBHm_Chr7g0206981 RchiOBHm_Chr7g0206991 RchiOBHm_Chr7g0207071 RchiOBHm_Chr7g0207121 RchiOBHm_Chr7g0207151 RchiOBHm_Chr7g0207181 RchiOBHm_Chr7g0207241 RchiOBHm_Chr7g0207251 RchiOBHm_Chr7g0207261 RchiOBHm_Chr7g0207411 RchiOBHm_Chr7g0207471 RchiOBHm_Chr7g0207701
rosa_laevigata RLG00000003296 RLG00000003302 RLG00000003326 RLG00000003346 RLG00000028901
rosa_multiflora Rmu_sc0000536.1_g000001 Rmu_sc0000536.1_g000002 Rmu_sc0004987.1_g000003 Rmu_sc0008509.1_g000002 Rmu_sc0008509.1_g000029 Rmu_sc0012558.1_g000001 Rmu_sc0013160.1_g000002 Rmu_sc0014912.1_g000004
rosa_roxburghii Rroxscaffold_3G00251310 Rroxscaffold_3G00251320 Rroxscaffold_3G00251410 Rroxscaffold_3G00252190 Rroxscaffold_4G00309810 Rroxscaffold_7G00206970 Rroxscaffold_7G00207090
rosa_rugosa Rorug01G0173500 Rorug01G0173600 Rorug05G0590200 Rorug07G0096400 Rorug07G0096700 Rorug07G0096900 Rorug07G0098500 Rorug07G0099000
rosa_samantha Rh1AG189700 Rh1BG156700 Rh1DG188100 Rh7BG221600 Rh7BG225000 Rh7BG225300 Rh7BG227500 Rh7BG227700 Rh7CG244800
rosa_wichuraiana Rw1G015650 Rw6G009210 Rw7G019820 Rw7G019850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 500, 798
Acc16I TGCGCA 1 cut(s) 1477
AccB1I GGYRCC 1 cut(s) 451
AccB7I CCANNNNNTGG 1 cut(s) 1354
AccBSI CCGCTC 1 cut(s) 75
AccI GTMKAC 3 cut(s) 246, 461, 882
AciI CCGC 6 cut(s) 73, 204, 548, 897, 1250, 1493
AclWI GGATC 3 cut(s) 209, 1261, 1332
AcsI RAATTY 2 cut(s) 812, 980
AcyI GRCGYC 5 cut(s) 129, 458, 497, 795, 920
AfaI GTAC 4 cut(s) 25, 482, 632, 656
AfiI CCNNNNNNNGG 3 cut(s) 224, 310, 1354
AflIII ACRYGT 1 cut(s) 181
AgeI ACCGGT 1 cut(s) 134
AgsI TTSAA 5 cut(s) 379, 652, 1126, 1286, 1418
AhlI ACTAGT 1 cut(s) 1294
AjnI CCWGG 2 cut(s) 223, 1025
AjuI GAANNNNNNNTTGG 2 cut(s) 170, 202
AluBI AGCT 5 cut(s) 33, 242, 409, 581, 1106
AluI AGCT 5 cut(s) 33, 242, 409, 581, 1106
Alw21I GWGCWC 2 cut(s) 489, 1092
Alw26I GTCTC 4 cut(s) 329, 353, 792, 802
Alw44I GTGCAC 1 cut(s) 485
AlwI GGATC 3 cut(s) 209, 1261, 1332
AlwNI CAGNNNCTG 1 cut(s) 1109
Ama87I CYCGRG 4 cut(s) 92, 490, 1226, 1437
AoxI GGCC 6 cut(s) 226, 279, 805, 1008, 1055, 1064
ApaLI GTGCAC 1 cut(s) 485
ApeKI GCWGC 6 cut(s) 18, 33, 466, 1103, 1307, 1310
ApoI RAATTY 2 cut(s) 812, 980
ArsI GACNNNNNNTTYG 2 cut(s) 425, 457
AsiGI ACCGGT 1 cut(s) 134
Asp700I GAANNNNTTC 2 cut(s) 374, 1121
AspLEI GCGC 2 cut(s) 967, 1478
AspS9I GGNCC 5 cut(s) 61, 805, 959, 1055, 1064
AsuC2I CCSGG 2 cut(s) 1438, 1439
AsuHPI GGTGA 4 cut(s) 124, 376, 424, 773
AvaI CYCGRG 4 cut(s) 92, 490, 1226, 1437
AvaII GGWCC 2 cut(s) 61, 959
BaeGI GKGCMC 1 cut(s) 489
BanI GGYRCC 1 cut(s) 451
BbsI GAAGAC 3 cut(s) 178, 250, 560
Bbv12I GWGCWC 2 cut(s) 489, 1092
BbvI GCAGC 6 cut(s) 20, 30, 478, 1115, 1294, 1322
BccI CCATC 3 cut(s) 47, 242, 678
BciT130I CCWGG 2 cut(s) 225, 1027
BclI TGATCA 3 cut(s) 661, 778, 907
BcnI CCSGG 2 cut(s) 1438, 1439
BcoDI GTCTC 4 cut(s) 329, 353, 792, 802
BcuI ACTAGT 1 cut(s) 1294
BfaI CTAG 3 cut(s) 939, 1188, 1295
BfmI CTRYAG 1 cut(s) 1308
BglI GCCNNNNNGGC 2 cut(s) 475, 1063
BisI GCNGC 8 cut(s) 19, 34, 467, 548, 1104, 1308, 1311, 1493
BlsI GCNGC 8 cut(s) 20, 35, 468, 549, 1105, 1309, 1312, 1494
Bme1390I CCNGG 4 cut(s) 225, 1027, 1438, 1439
Bme18I GGWCC 2 cut(s) 61, 959
BmeT110I CYCGRG 4 cut(s) 92, 490, 1226, 1437
BmgT120I GGNCC 5 cut(s) 61, 805, 959, 1055, 1064
BmiI GGNNCC 5 cut(s) 139, 453, 1005, 1065, 1168
BmrFI CCNGG 4 cut(s) 225, 1027, 1438, 1439
BmrI ACTGGG 1 cut(s) 1208
BmsI GCATC 3 cut(s) 534, 1144, 1255
BmuI ACTGGG 1 cut(s) 1208
BpiI GAAGAC 3 cut(s) 178, 250, 560
BplI GAGNNNNNCTC 4 cut(s) 59, 91, 1079, 1111
BpuMI CCSGG 2 cut(s) 1438, 1439
BsaAI YACGTR 1 cut(s) 484
BsaBI GATNNNNATC 1 cut(s) 1341
BsaHI GRCGYC 5 cut(s) 129, 458, 497, 795, 920
BsaJI CCNNGG 5 cut(s) 223, 269, 570, 1025, 1437
BsaWI WCCGGW 1 cut(s) 134
BsaXI ACNNNNNCTCC 2 cut(s) 158, 188
Bsc4I CCNNNNNNNGG 3 cut(s) 224, 310, 1354
Bse118I RCCGGY 4 cut(s) 134, 454, 474, 956
Bse1I ACTGG 3 cut(s) 395, 1214, 1359
Bse3DI GCAATG 1 cut(s) 697
Bse8I GATNNNNATC 1 cut(s) 1341
BseBI CCWGG 2 cut(s) 225, 1027
BseDI CCNNGG 5 cut(s) 223, 269, 570, 1025, 1437
BseGI GGATG 3 cut(s) 105, 234, 549
BseJI GATNNNNATC 1 cut(s) 1341
BseLI CCNNNNNNNGG 3 cut(s) 224, 310, 1354
BseMI GCAATG 1 cut(s) 697
BseMII CTCAG 4 cut(s) 276, 348, 813, 866
BseNI ACTGG 3 cut(s) 395, 1214, 1359
BseRI GAGGAG 2 cut(s) 719, 1084
BseSI GKGCMC 1 cut(s) 489
BseXI GCAGC 6 cut(s) 20, 30, 478, 1115, 1294, 1322
Bsh1285I CGRYCG 1 cut(s) 988
BshFI GGCC 6 cut(s) 228, 281, 807, 1010, 1057, 1066
BshNI GGYRCC 1 cut(s) 451
BshTI ACCGGT 1 cut(s) 134
BsiEI CGRYCG 1 cut(s) 988
BsiHKAI GWGCWC 2 cut(s) 489, 1092
BsiHKCI CYCGRG 4 cut(s) 92, 490, 1226, 1437
BsiSI CCGG 7 cut(s) 135, 383, 455, 475, 957, 1007, 1438
BslFI GGGAC 3 cut(s) 91, 508, 745
BslI CCNNNNNNNGG 3 cut(s) 224, 310, 1354
BsmAI GTCTC 4 cut(s) 329, 353, 792, 802
BsmBI CGTCTC 3 cut(s) 353, 792, 802
BsmFI GGGAC 3 cut(s) 91, 508, 745
BsnI GGCC 6 cut(s) 228, 281, 807, 1010, 1057, 1066
BsoBI CYCGRG 4 cut(s) 92, 490, 1226, 1437
Bsp1286I GDGCHC 2 cut(s) 489, 1092
Bsp1407I TGTACA 1 cut(s) 630
Bsp19I CCATGG 1 cut(s) 269
BspACI CCGC 6 cut(s) 73, 204, 548, 897, 1250, 1493
BspANI GGCC 6 cut(s) 228, 281, 807, 1010, 1057, 1066
BspCNI CTCAG 4 cut(s) 277, 349, 812, 865
BspHI TCATGA 1 cut(s) 790
BspLI GGNNCC 5 cut(s) 139, 453, 1005, 1065, 1168
BspMAI CTGCAG 1 cut(s) 1312
BspPI GGATC 3 cut(s) 209, 1261, 1332
BspT107I GGYRCC 1 cut(s) 451
BsrBI CCGCTC 1 cut(s) 75
BsrDI GCAATG 1 cut(s) 697
BsrFI RCCGGY 4 cut(s) 134, 454, 474, 956
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 3 cut(s) 395, 1214, 1359
BssAI RCCGGY 4 cut(s) 134, 454, 474, 956
BssECI CCNNGG 5 cut(s) 223, 269, 570, 1025, 1437
BssNAI GTATAC 1 cut(s) 883
BssNI GRCGYC 5 cut(s) 129, 458, 497, 795, 920
BssT1I CCWWGG 1 cut(s) 269
Bst1107I GTATAC 1 cut(s) 883
Bst2UI CCWGG 2 cut(s) 225, 1027
Bst4CI ACNGT 6 cut(s) 49, 364, 730, 1045, 1111, 1372
BstACI GRCGYC 5 cut(s) 129, 458, 497, 795, 920
BstAPI GCANNNNNTGC 1 cut(s) 484
BstAUI TGTACA 1 cut(s) 630
BstBAI YACGTR 1 cut(s) 484
BstC8I GCNNGC 3 cut(s) 266, 456, 1038
BstDEI CTNAG 5 cut(s) 285, 357, 641, 799, 852
BstDSI CCRYGG 2 cut(s) 269, 570
BstENI CCTNNNNNAGG 1 cut(s) 222
BstF5I GGATG 3 cut(s) 105, 234, 549
BstHHI GCGC 2 cut(s) 967, 1478
BstMAI GTCTC 4 cut(s) 329, 353, 792, 802
BstMCI CGRYCG 1 cut(s) 988
BstMWI GCNNNNNNNGC 6 cut(s) 329, 475, 484, 708, 962, 1063
BstNI CCWGG 2 cut(s) 225, 1027
BstNSI RCATGY 1 cut(s) 91
BstSCI CCNGG 4 cut(s) 223, 1025, 1436, 1437
BstSFI CTRYAG 1 cut(s) 1308
BstSLI GKGCMC 1 cut(s) 489
BstV1I GCAGC 6 cut(s) 20, 30, 478, 1115, 1294, 1322
BstV2I GAAGAC 3 cut(s) 178, 250, 560
BstX2I RGATCY 1 cut(s) 1253
BstYI RGATCY 1 cut(s) 1253
BstZ17I GTATAC 1 cut(s) 883
BsuRI GGCC 6 cut(s) 228, 281, 807, 1010, 1057, 1066
BtgI CCRYGG 2 cut(s) 269, 570
BtgZI GCGATG 1 cut(s) 937
BtsCI GGATG 3 cut(s) 105, 234, 549
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 4 cut(s) 402, 432, 860, 1050
Cac8I GCNNGC 3 cut(s) 266, 456, 1038
CaiI CAGNNNCTG 1 cut(s) 1109
CciI TCATGA 1 cut(s) 790
CfoI GCGC 2 cut(s) 967, 1478
Cfr10I RCCGGY 4 cut(s) 134, 454, 474, 956
Cfr13I GGNCC 5 cut(s) 61, 805, 959, 1055, 1064
Cfr9I CCCGGG 1 cut(s) 1437
CseI GACGC 4 cut(s) 118, 447, 472, 928
Csp6I GTAC 4 cut(s) 24, 481, 631, 655
CspAI ACCGGT 1 cut(s) 134
CviAII CATG 5 cut(s) 88, 270, 791, 893, 911
CviQI GTAC 4 cut(s) 24, 481, 631, 655
DdeI CTNAG 5 cut(s) 285, 357, 641, 799, 852
DraI TTTAAA 2 cut(s) 979, 1408
EciI GGCGGA 2 cut(s) 193, 912
Eco130I CCWWGG 1 cut(s) 269
Eco147I AGGCCT 1 cut(s) 281
Eco47I GGWCC 2 cut(s) 61, 959
Eco88I CYCGRG 4 cut(s) 92, 490, 1226, 1437
EcoNI CCTNNNNNAGG 1 cut(s) 222
EcoO109I RGGNCCY 1 cut(s) 1055
EcoRII CCWGG 2 cut(s) 223, 1025
EcoT14I CCWWGG 1 cut(s) 269
ErhI CCWWGG 1 cut(s) 269
Esp3I CGTCTC 3 cut(s) 353, 792, 802
FaeI CATG 5 cut(s) 91, 273, 794, 896, 914
FaqI GGGAC 3 cut(s) 91, 508, 745
FatI CATG 5 cut(s) 87, 269, 790, 892, 910
FauI CCCGC 1 cut(s) 1243
FbaI TGATCA 3 cut(s) 661, 778, 907
FblI GTMKAC 3 cut(s) 246, 461, 882
Fnu4HI GCNGC 8 cut(s) 19, 34, 467, 548, 1104, 1308, 1311, 1493
FokI GGATG 3 cut(s) 112, 221, 556
Fsp4HI GCNGC 8 cut(s) 19, 34, 467, 548, 1104, 1308, 1311, 1493
FspBI CTAG 3 cut(s) 939, 1188, 1295
FspI TGCGCA 1 cut(s) 1477
GlaI GCGC 2 cut(s) 966, 1477
GluI GCNGC 8 cut(s) 19, 34, 467, 548, 1104, 1308, 1311, 1493
HaeIII GGCC 6 cut(s) 228, 281, 807, 1010, 1057, 1066
HapII CCGG 7 cut(s) 135, 383, 455, 475, 957, 1007, 1438
HgaI GACGC 4 cut(s) 118, 447, 472, 928
HhaI GCGC 2 cut(s) 967, 1478
Hin1I GRCGYC 5 cut(s) 129, 458, 497, 795, 920
Hin1II CATG 5 cut(s) 91, 273, 794, 896, 914
Hin6I GCGC 2 cut(s) 965, 1476
HinP1I GCGC 2 cut(s) 965, 1476
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HinfI GANTC 8 cut(s) 11, 143, 287, 566, 637, 744, 900, 1457
HpaII CCGG 7 cut(s) 135, 383, 455, 475, 957, 1007, 1438
HphI GGTGA 4 cut(s) 124, 376, 424, 773
Hpy166II GTNNAC 5 cut(s) 247, 462, 487, 829, 883
Hpy188III TCNNGA 6 cut(s) 218, 791, 944, 1015, 1286, 1418
Hpy8I GTNNAC 5 cut(s) 247, 462, 487, 829, 883
Hpy99I CGWCG 6 cut(s) 215, 463, 466, 502, 890, 922
HpyAV CCTTC 5 cut(s) 1021, 1068, 1083, 1327, 1391
HpyCH4III ACNGT 6 cut(s) 49, 364, 730, 1045, 1111, 1372
HpyCH4IV ACGT 5 cut(s) 181, 210, 483, 497, 795
HpyCH4V TGCA 8 cut(s) 425, 487, 1040, 1051, 1103, 1268, 1300, 1310
HpyF10VI GCNNNNNNNGC 6 cut(s) 329, 475, 484, 708, 962, 1063
HpyF3I CTNAG 5 cut(s) 285, 357, 641, 799, 852
HpySE526I ACGT 5 cut(s) 181, 210, 483, 497, 795
Hsp92I GRCGYC 5 cut(s) 129, 458, 497, 795, 920
Hsp92II CATG 5 cut(s) 91, 273, 794, 896, 914
HspAI GCGC 2 cut(s) 965, 1476
KroI GCCGGC 1 cut(s) 454
KroNI GCCGGC 1 cut(s) 456
Ksp22I TGATCA 3 cut(s) 661, 778, 907
LmnI GCTCC 1 cut(s) 1400
Lsp1109I GCAGC 6 cut(s) 20, 30, 478, 1115, 1294, 1322
LweI GCATC 3 cut(s) 534, 1144, 1255
MaeI CTAG 3 cut(s) 939, 1188, 1295
MaeII ACGT 5 cut(s) 181, 210, 483, 497, 795
MaeIII GTNAC 4 cut(s) 130, 431, 584, 1216
MbiI CCGCTC 1 cut(s) 75
MboII GAAGA 7 cut(s) 178, 181, 250, 565, 739, 1129, 1301
MfeI CAATTG 2 cut(s) 1098, 1301
MflI RGATCY 1 cut(s) 1253
MhlI GDGCHC 2 cut(s) 489, 1092
MluCI AATT 9 cut(s) 674, 713, 812, 876, 980, 1098, 1301, 1464, 1546
MlyI GAGTC 3 cut(s) 20, 296, 575
MmeI TCCRAC 4 cut(s) 171, 189, 255, 941
MroNI GCCGGC 1 cut(s) 454
MroXI GAANNNNTTC 2 cut(s) 374, 1121
MseI TTAA 5 cut(s) 690, 927, 978, 1113, 1407
MslI CAYNNNNRTG 1 cut(s) 395
MspI CCGG 7 cut(s) 135, 383, 455, 475, 957, 1007, 1438
MspR9I CCNGG 4 cut(s) 225, 1027, 1438, 1439
MunI CAATTG 2 cut(s) 1098, 1301
MvaI CCWGG 2 cut(s) 225, 1027
MwoI GCNNNNNNNGC 6 cut(s) 329, 475, 484, 708, 962, 1063
NaeI GCCGGC 1 cut(s) 456
NciI CCSGG 2 cut(s) 1438, 1439
NcoI CCATGG 1 cut(s) 269
NgoMIV GCCGGC 1 cut(s) 454
NlaIII CATG 5 cut(s) 91, 273, 794, 896, 914
NlaIV GGNNCC 5 cut(s) 139, 453, 1005, 1065, 1168
NmeAIII GCCGAG 1 cut(s) 358
NmuCI GTSAC 3 cut(s) 130, 431, 584
NsbI TGCGCA 1 cut(s) 1477
NspI RCATGY 1 cut(s) 91
PagI TCATGA 1 cut(s) 790
PceI AGGCCT 1 cut(s) 281
PcsI WCGNNNNNNNCGW 2 cut(s) 455, 467
PdiI GCCGGC 1 cut(s) 456
PdmI GAANNNNTTC 2 cut(s) 374, 1121
PfeI GAWTC 5 cut(s) 143, 637, 744, 900, 1457
PflMI CCANNNNNTGG 1 cut(s) 1354
PinAI ACCGGT 1 cut(s) 134
PkrI GCNGC 8 cut(s) 20, 35, 468, 549, 1105, 1309, 1312, 1494
Ple19I CGATCG 1 cut(s) 988
PleI GAGTC 3 cut(s) 19, 295, 574
PpsI GAGTC 3 cut(s) 19, 295, 574
Ppu21I YACGTR 1 cut(s) 484
Psp6I CCWGG 2 cut(s) 223, 1025
PspGI CCWGG 2 cut(s) 223, 1025
PspN4I GGNNCC 5 cut(s) 139, 453, 1005, 1065, 1168
PspPI GGNCC 5 cut(s) 61, 805, 959, 1055, 1064
PsrI GAACNNNNNNTAC 4 cut(s) 191, 223, 464, 496
PstI CTGCAG 1 cut(s) 1312
PstNI CAGNNNCTG 1 cut(s) 1109
PsuI RGATCY 1 cut(s) 1253
PvuI CGATCG 1 cut(s) 988
RsaI GTAC 4 cut(s) 25, 482, 632, 656
RsaNI GTAC 4 cut(s) 24, 481, 631, 655
RseI CAYNNNNRTG 1 cut(s) 395
SalI GTCGAC 1 cut(s) 460
SaqAI TTAA 5 cut(s) 690, 927, 978, 1113, 1407
SatI GCNGC 8 cut(s) 19, 34, 467, 548, 1104, 1308, 1311, 1493
Sau96I GGNCC 5 cut(s) 61, 805, 959, 1055, 1064
SchI GAGTC 3 cut(s) 20, 296, 575
ScrFI CCNGG 4 cut(s) 225, 1027, 1438, 1439
SduI GDGCHC 2 cut(s) 489, 1092
SfaNI GCATC 3 cut(s) 534, 1144, 1255
SfcI CTRYAG 1 cut(s) 1308
SfiI GGCCNNNNNGGCC 1 cut(s) 1063
SgrDI CGTCGACG 1 cut(s) 460
SinI GGWCC 2 cut(s) 61, 959
SmaI CCCGGG 1 cut(s) 1439
SmiMI CAYNNNNRTG 1 cut(s) 395
SpeI ACTAGT 1 cut(s) 1294
Sse9I AATT 9 cut(s) 674, 713, 812, 876, 980, 1098, 1301, 1464, 1546
SseBI AGGCCT 1 cut(s) 281
SsiI CCGC 6 cut(s) 73, 204, 548, 897, 1250, 1493
SspI AATATT 1 cut(s) 1413
SspMI CTAG 3 cut(s) 939, 1188, 1295
StuI AGGCCT 1 cut(s) 281
StyD4I CCNGG 4 cut(s) 223, 1025, 1436, 1437
StyI CCWWGG 1 cut(s) 269
TaaI ACNGT 6 cut(s) 49, 364, 730, 1045, 1111, 1372
TaiI ACGT 5 cut(s) 184, 213, 486, 500, 798
TaqI TCGA 6 cut(s) 14, 81, 213, 461, 750, 984
TasI AATT 9 cut(s) 674, 713, 812, 876, 980, 1098, 1301, 1464, 1546
TatI WGTACW 3 cut(s) 23, 630, 654
TauI GCSGC 2 cut(s) 550, 1495
TfiI GAWTC 5 cut(s) 143, 637, 744, 900, 1457
Tru1I TTAA 5 cut(s) 690, 927, 978, 1113, 1407
Tru9I TTAA 5 cut(s) 690, 927, 978, 1113, 1407
TscAI CASTG 4 cut(s) 402, 432, 860, 1050
TseFI GTSAC 3 cut(s) 130, 431, 584
TseI GCWGC 6 cut(s) 18, 33, 466, 1103, 1307, 1310
Tsp45I GTSAC 3 cut(s) 130, 431, 584
TspDTI ATGAA 7 cut(s) 116, 383, 862, 876, 1065, 1437, 1505
TspGWI ACGGA 2 cut(s) 519, 559
TspMI CCCGGG 1 cut(s) 1437
TspRI CASTG 4 cut(s) 402, 432, 860, 1050
Van91I CCANNNNNTGG 1 cut(s) 1354
VneI GTGCAC 1 cut(s) 485
VpaK11BI GGWCC 2 cut(s) 61, 959
XagI CCTNNNNNAGG 1 cut(s) 222
XapI RAATTY 2 cut(s) 812, 980
XceI RCATGY 1 cut(s) 91
XcmI CCANNNNNNNNNTGG 1 cut(s) 46
XmaI CCCGGG 1 cut(s) 1437
XmiI GTMKAC 3 cut(s) 246, 461, 882
XmnI GAANNNNTTC 2 cut(s) 374, 1121
XspI CTAG 3 cut(s) 939, 1188, 1295
ZraI GACGTC 2 cut(s) 498, 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.