FvH4_2g29861

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
23111612 .. 23114398
2787 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29861.t1

Sequence Viewer

Length: 1953 bp
ATGGCTTCTTCCTCTACCTCAGGATCTGATTCAATATTTCTTTCCATTCAACTCATTCTACTCATCACCATTGTCACCACTCAGGCCGCCATTGTTGTGCCTCCATTCCTAGGCATCGTTTGTTCAAACGAAAAGGGCAACTTCACCAACGGCAGCACCTACCAAGAAAACATCAAGGGCCTCCTCTCCATTCTCCTCTCCAACAGTAATGGCACCTACTTCTACACCGCCTCTTACGGATTCAGCGACACCGTTTATGGTGTCGGACTCTGTAGACCGGACATACTTCAAGATCCATGCTCCACTTGCCTCAAAAACTCCTCACATCTCCTCACTCAGTCTTGTCCTAACCAGAAGGAGGCCATCATATGGAACCAGCATTGCATGCTACGCTACTCGAATCGTTCCATATACGGCCTCCTCGAGCTGGTTCCAGCTTATAGTCAATCCAAAACTGAAAACATTTCGTCGTGGGACTTGTATGAACTGAACCAGGAGCTAGTGGGGTTACTGCAAGAACTGAGAAATGAGGCTGCAGCAGGTGGTGGTCTTCGTAAGTTTCAAGTGTACAAGGGGAGGTCTAACAAATCTAATAACCAATCGATTTATGGACTTACGCAGTGCACTCCGGATTTGTCAGAGCAAGACTGCAAGATGTGCTTGGATGAGGGTTTGGGGGAGCTTCAGAAATGTTGTTATGGCATGGATTATGGGAGATATGCTAATCCCAGCTGTAATTTGATGTATCTTGTTTATGATTTTTCTGACCCTGATCCATTTGAGTCTACTCCGACCTCTTCAACTAATACAACTATAATTTCAACAGGAAATAAGCAGGGTAAAATATCTAGGACTGTTATCATTATTGTTGTGACCATTTTTGTATCTCTGGTACTACTAGTTGCATCCATCTACATTTATCTCAGAGTAAGGAAGACAAAGCAGAAACTTGAAGATGAAATTAGAAATGCAGATGCCTTGCAGTTTGAGTTCGCCTCCATTCGTGTTGCCACCAATAATTTTGCTGAAGCAAATAAGCTTGGACGCGGTGGGTTTGGTGCTGTTTATAGGGGTAGGCTTTTGAATGGTGAAGATATTGCAGTGAAAAGGCTTTCTAGAGATTCTTCACAAGGAGATATAGAATTTAAGAACGAGGTCACCTTAGTGGCTAAACTTCAGCACCGGAATTTGGTTAGACTCCTTGGTTTCTGCCTTCAAGGAAATGAAAGACTTCTAGTCTACGAGTTTGTCCCTAATGCAAGTCTTGATCATTTTATATTTGATCATGTTAGGCGAGGACATTTGGATTGGGATCGACGCTACAAAATCATAGTAGGCATTGCACGAGGACTTCTTTACCTTCACGAAGATTCTCGTCTTAGAATTATCCATCGTGATCTGAAAGCTAGTAATGTTCTGCTAGATGGGGAAATGAACCCCAAAATTGCAGATTTTGGTATGGCAAGATTGTTTGATTTTGATCAAACACAAGGTGAAACGAGTCGAATTGTTGGCACTTACGGTTATATGGCTCCAGAATATGTAATGCGTGGACACTTTTCTGTCAAGTCTGACGTTTATAGCTACGGTGTATTAGTTTTAGAGATAGTTTGTGGACAGAAGAATAGTTCTTTCCGTCATGAAGATAATATAGTGGATCTTCTAAGCTATGCATGGAAAAGTTGGAAGGAGGGTACAACTTCAAGTTTGATAGATTCAATGTTAAGGACTGGTTCAAGAAGTGAAATAATGAGGTGCATACACATAGGGTTGTTATGTGTGCAGCAAAGCATAGTTGATAGACCAACCATGGCTGCCGTTATTCAAATGCTTACTAGCAACTCTCTCAAGCTCCGAGTGCCATCACAACCAGCATTTTACACGTTTAGTGGCATTGGTTCCTCATCCAGTATGTCATTGGGACTGGAGAGTAGCTCAGGAGTGACAGAGTAG

Protein Analysis

651

Amino Acids

72.51

Weight (kDa)

7.12

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 41 - 135 2.5e-23 Salt stress response/antifungal
Stress-antifung PF01657 164 - 249 8.8e-09 Salt stress response/antifungal
Pkinase PF00069 342 - 551 9.4e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 345 - 610 1.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 530
Acc36I ACCTGC 1 cut(s) 530
AccB1I GGYRCC 1 cut(s) 212
AccB7I CCANNNNNTGG 1 cut(s) 369
AccI GTMKAC 3 cut(s) 274, 785, 1239
AccII CGCG 1 cut(s) 1047
AccIII TCCGGA 1 cut(s) 628
AciI CCGC 3 cut(s) 87, 228, 1047
AclWI GGATC 5 cut(s) 31, 287, 767, 1320, 1665
AcsI RAATTY 2 cut(s) 1142, 1186
AcuI CTGAAG 3 cut(s) 668, 1047, 1160
AdeI CACNNNGTG 1 cut(s) 1493
AfaI GTAC 3 cut(s) 569, 894, 1696
AfiI CCNNNNNNNGG 5 cut(s) 110, 358, 369, 427, 1189
AflIII ACRYGT 1 cut(s) 1881
AhdI GACNNNNNGTC 1 cut(s) 1235
AhlI ACTAGT 1 cut(s) 898
AjnI CCWGG 1 cut(s) 492
AleI CACNNNNGTG 1 cut(s) 1163
Alw21I GWGCWC 1 cut(s) 626
Alw44I GTGCAC 1 cut(s) 622
AlwI GGATC 5 cut(s) 31, 287, 767, 1320, 1665
AlwNI CAGNNNCTG 1 cut(s) 26
Ama87I CYCGRG 1 cut(s) 422
Aor13HI TCCGGA 1 cut(s) 628
AoxI GGCC 4 cut(s) 84, 178, 360, 415
ApaLI GTGCAC 1 cut(s) 622
ApeKI GCWGC 5 cut(s) 153, 533, 536, 1783, 1814
ApoI RAATTY 2 cut(s) 1142, 1186
Asp700I GAANNNNTTC 1 cut(s) 1230
AspA2I CCTAGG 1 cut(s) 109
AspS9I GGNCC 1 cut(s) 178
AsuHPI GGTGA 6 cut(s) 58, 67, 136, 1100, 1150, 1505
AvaI CYCGRG 1 cut(s) 422
AvrII CCTAGG 1 cut(s) 109
AxyI CCTNAGG 1 cut(s) 19
BaeGI GKGCMC 1 cut(s) 626
BanI GGYRCC 1 cut(s) 212
BauI CACGAG 1 cut(s) 1344
BbsI GAAGAC 2 cut(s) 542, 941
Bbv12I GWGCWC 1 cut(s) 626
BbvI GCAGC 5 cut(s) 165, 520, 548, 1795, 1801
BccI CCATC 5 cut(s) 371, 917, 1398, 1418, 1870
BceAI ACGGC 3 cut(s) 166, 430, 1802
BciT130I CCWGG 1 cut(s) 494
BclI TGATCA 3 cut(s) 1267, 1282, 1480
BcuI ACTAGT 1 cut(s) 898
BfaI CTAG 9 cut(s) 110, 500, 849, 899, 1116, 1235, 1407, 1421, 1836
BfmI CTRYAG 2 cut(s) 271, 534
BfuAI ACCTGC 1 cut(s) 530
BisI GCNGC 6 cut(s) 87, 154, 534, 537, 1784, 1815
BlnI CCTAGG 1 cut(s) 109
BlsI GCNGC 6 cut(s) 88, 155, 535, 538, 1785, 1816
Bme1390I CCNGG 1 cut(s) 494
BmeRI GACNNNNNGTC 1 cut(s) 1235
BmeT110I CYCGRG 1 cut(s) 422
BmgT120I GGNCC 1 cut(s) 178
BmiI GGNNCC 5 cut(s) 214, 374, 432, 1533, 1900
BmrFI CCNGG 1 cut(s) 494
BmsI GCATC 3 cut(s) 123, 914, 964
BpiI GAAGAC 2 cut(s) 542, 941
BplI GAGNNNNNCTC 4 cut(s) 980, 1012, 1919, 1951
BpmI CTGGAG 2 cut(s) 1518, 1946
Bpu10I CCTNAGC 1 cut(s) 1936
BpuEI CTTGAG 1 cut(s) 1832
Bsa29I ATCGAT 1 cut(s) 602
BsaBI GATNNNNATC 2 cut(s) 1311, 1479
BsaJI CCNNGG 3 cut(s) 109, 1201, 1809
BsaWI WCCGGW 3 cut(s) 277, 628, 1182
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 358, 369, 427, 1189
Bse1I ACTGG 3 cut(s) 1735, 1908, 1929
Bse21I CCTNAGG 1 cut(s) 19
Bse3DI GCAATG 2 cut(s) 379, 1338
Bse8I GATNNNNATC 2 cut(s) 1311, 1479
BseAI TCCGGA 1 cut(s) 628
BseBI CCWGG 1 cut(s) 494
BseCI ATCGAT 1 cut(s) 602
BseDI CCNNGG 3 cut(s) 109, 1201, 1809
BseGI GGATG 3 cut(s) 670, 905, 1904
BseJI GATNNNNATC 2 cut(s) 1311, 1479
BseLI CCNNNNNNNGG 5 cut(s) 110, 358, 369, 427, 1189
BseMI GCAATG 2 cut(s) 379, 1338
BseMII CTCAG 6 cut(s) 33, 95, 350, 512, 937, 1950
BseNI ACTGG 3 cut(s) 1735, 1908, 1929
BseRI GAGGAG 5 cut(s) 173, 185, 310, 320, 410
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 5 cut(s) 165, 520, 548, 1795, 1801
BseYI CCCAGC 1 cut(s) 728
BsgI GTGCAG 1 cut(s) 1802
Bsh1236I CGCG 1 cut(s) 1047
BshFI GGCC 4 cut(s) 86, 180, 362, 417
BshNI GGYRCC 1 cut(s) 212
BshVI ATCGAT 1 cut(s) 602
BsiHKAI GWGCWC 1 cut(s) 626
BsiHKCI CYCGRG 1 cut(s) 422
BsiSI CCGG 3 cut(s) 278, 629, 1183
BslFI GGGAC 3 cut(s) 488, 1235, 1935
BslI CCNNNNNNNGG 5 cut(s) 110, 358, 369, 427, 1189
BsmFI GGGAC 3 cut(s) 488, 1235, 1935
BsnI GGCC 4 cut(s) 86, 180, 362, 417
BsoBI CYCGRG 1 cut(s) 422
Bsp1286I GDGCHC 1 cut(s) 626
Bsp13I TCCGGA 1 cut(s) 628
Bsp1407I TGTACA 1 cut(s) 567
Bsp143I GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
Bsp19I CCATGG 1 cut(s) 1809
BspACI CCGC 3 cut(s) 87, 228, 1047
BspANI GGCC 4 cut(s) 86, 180, 362, 417
BspCNI CTCAG 6 cut(s) 32, 94, 349, 513, 936, 1949
BspDI ATCGAT 1 cut(s) 602
BspEI TCCGGA 1 cut(s) 628
BspFNI CGCG 1 cut(s) 1047
BspHI TCATGA 1 cut(s) 1639
BspLI GGNNCC 5 cut(s) 214, 374, 432, 1533, 1900
BspMAI CTGCAG 1 cut(s) 538
BspMI ACCTGC 1 cut(s) 530
BspPI GGATC 5 cut(s) 31, 287, 767, 1320, 1665
BspT107I GGYRCC 1 cut(s) 212
BsrDI GCAATG 2 cut(s) 379, 1338
BsrGI TGTACA 1 cut(s) 567
BsrI ACTGG 3 cut(s) 1735, 1908, 1929
BssECI CCNNGG 3 cut(s) 109, 1201, 1809
BssMI GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
BssSI CACGAG 1 cut(s) 1344
BssT1I CCWWGG 3 cut(s) 109, 1201, 1809
Bst2BI CACGAG 1 cut(s) 1344
Bst2UI CCWGG 1 cut(s) 494
Bst4CI ACNGT 5 cut(s) 206, 253, 856, 1523, 1589
Bst6I CTCTTC 1 cut(s) 802
BstAPI GCANNNNNTGC 2 cut(s) 385, 657
BstAUI TGTACA 1 cut(s) 567
BstC8I GCNNGC 1 cut(s) 386
BstDEI CTNAG 9 cut(s) 19, 81, 336, 521, 923, 1162, 1379, 1664, 1936
BstDSI CCRYGG 1 cut(s) 1809
BstEII GGTNACC 1 cut(s) 1156
BstF5I GGATG 3 cut(s) 670, 905, 1904
BstFNI CGCG 1 cut(s) 1047
BstKTI GATC 9 cut(s) 26, 295, 775, 1270, 1285, 1315, 1399, 1483, 1660
BstMBI GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
BstMWI GCNNNNNNNGC 5 cut(s) 306, 385, 390, 657, 1858
BstNI CCWGG 1 cut(s) 494
BstNSI RCATGY 1 cut(s) 388
BstPI GGTNACC 1 cut(s) 1156
BstSCI CCNGG 1 cut(s) 492
BstSFI CTRYAG 2 cut(s) 271, 534
BstSLI GKGCMC 1 cut(s) 626
BstUI CGCG 1 cut(s) 1047
BstV1I GCAGC 5 cut(s) 165, 520, 548, 1795, 1801
BstV2I GAAGAC 2 cut(s) 542, 941
BstX2I RGATCY 3 cut(s) 23, 292, 1657
BstYI RGATCY 3 cut(s) 23, 292, 1657
Bsu15I ATCGAT 1 cut(s) 602
Bsu36I CCTNAGG 1 cut(s) 19
BsuRI GGCC 4 cut(s) 86, 180, 362, 417
BsuTUI ATCGAT 1 cut(s) 602
BtgI CCRYGG 1 cut(s) 1809
BtsCI GGATG 3 cut(s) 670, 905, 1904
BtsI GCAGTG 2 cut(s) 626, 1107
BtsIMutI CAGTG 2 cut(s) 626, 1107
BveI ACCTGC 1 cut(s) 530
Cac8I GCNNGC 1 cut(s) 386
CaiI CAGNNNCTG 1 cut(s) 26
CciI TCATGA 1 cut(s) 1639
Cfr13I GGNCC 1 cut(s) 178
ClaI ATCGAT 1 cut(s) 602
CseI GACGC 2 cut(s) 1053, 1326
Csp6I GTAC 3 cut(s) 568, 893, 1695
CviAII CATG 7 cut(s) 297, 385, 703, 1286, 1640, 1674, 1810
CviQI GTAC 3 cut(s) 568, 893, 1695
DdeI CTNAG 9 cut(s) 19, 81, 336, 521, 923, 1162, 1379, 1664, 1936
DpnI GATC 9 cut(s) 25, 294, 774, 1269, 1284, 1314, 1398, 1482, 1659
DpnII GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
DraIII CACNNNGTG 1 cut(s) 1493
DriI GACNNNNNGTC 1 cut(s) 1235
Eam1104I CTCTTC 1 cut(s) 802
Eam1105I GACNNNNNGTC 1 cut(s) 1235
EarI CTCTTC 1 cut(s) 802
Eco130I CCWWGG 3 cut(s) 109, 1201, 1809
Eco57I CTGAAG 3 cut(s) 668, 1047, 1160
Eco81I CCTNAGG 1 cut(s) 19
Eco88I CYCGRG 1 cut(s) 422
Eco91I GGTNACC 1 cut(s) 1156
EcoO109I RGGNCCY 1 cut(s) 178
EcoO65I GGTNACC 1 cut(s) 1156
EcoRII CCWGG 1 cut(s) 492
EcoT14I CCWWGG 3 cut(s) 109, 1201, 1809
EcoT22I ATGCAT 1 cut(s) 1675
ErhI CCWWGG 3 cut(s) 109, 1201, 1809
FaeI CATG 7 cut(s) 300, 388, 706, 1289, 1643, 1677, 1813
FalI AAGNNNNNCTT 4 cut(s) 125, 157, 644, 676
FaqI GGGAC 3 cut(s) 488, 1235, 1935
FatI CATG 7 cut(s) 296, 384, 702, 1285, 1639, 1673, 1809
FauNDI CATATG 1 cut(s) 368
FbaI TGATCA 3 cut(s) 1267, 1282, 1480
FblI GTMKAC 3 cut(s) 274, 785, 1239
Fnu4HI GCNGC 6 cut(s) 87, 154, 534, 537, 1784, 1815
FokI GGATG 3 cut(s) 677, 892, 1891
Fsp4HI GCNGC 6 cut(s) 87, 154, 534, 537, 1784, 1815
FspBI CTAG 9 cut(s) 110, 500, 849, 899, 1116, 1235, 1407, 1421, 1836
GluI GCNGC 6 cut(s) 87, 154, 534, 537, 1784, 1815
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 2 cut(s) 1518, 1946
HaeIII GGCC 4 cut(s) 86, 180, 362, 417
HapII CCGG 3 cut(s) 278, 629, 1183
HgaI GACGC 2 cut(s) 1053, 1326
Hin1II CATG 7 cut(s) 300, 388, 706, 1289, 1643, 1677, 1813
HindIII AAGCTT 1 cut(s) 1037
HpaII CCGG 3 cut(s) 278, 629, 1183
HphI GGTGA 6 cut(s) 58, 67, 136, 1100, 1150, 1505
Hpy166II GTNNAC 7 cut(s) 275, 568, 624, 786, 1240, 1553, 1616
Hpy8I GTNNAC 7 cut(s) 275, 568, 624, 786, 1240, 1553, 1616
Hpy99I CGWCG 2 cut(s) 472, 1320
HpyAV CCTTC 4 cut(s) 349, 1223, 1370, 1681
HpyCH4III ACNGT 5 cut(s) 206, 253, 856, 1523, 1589
HpyCH4IV ACGT 2 cut(s) 1575, 1883
HpyF10VI GCNNNNNNNGC 5 cut(s) 306, 385, 390, 657, 1858
HpyF3I CTNAG 9 cut(s) 19, 81, 336, 521, 923, 1162, 1379, 1664, 1936
HpySE526I ACGT 2 cut(s) 1575, 1883
Hsp92II CATG 7 cut(s) 300, 388, 706, 1289, 1643, 1677, 1813
Kpn2I TCCGGA 1 cut(s) 628
Ksp22I TGATCA 3 cut(s) 1267, 1282, 1480
Kzo9I GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
LmnI GCTCC 5 cut(s) 305, 496, 679, 1537, 1857
Lsp1109I GCAGC 5 cut(s) 165, 520, 548, 1795, 1801
LweI GCATC 3 cut(s) 123, 914, 964
MaeI CTAG 9 cut(s) 110, 500, 849, 899, 1116, 1235, 1407, 1421, 1836
MaeII ACGT 2 cut(s) 1575, 1883
MaeIII GTNAC 5 cut(s) 73, 507, 871, 1156, 1942
MalI GATC 9 cut(s) 25, 294, 774, 1269, 1284, 1314, 1398, 1482, 1659
MboI GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
MflI RGATCY 3 cut(s) 23, 292, 1657
MhlI GDGCHC 1 cut(s) 626
MluCI AATT 9 cut(s) 736, 816, 960, 1018, 1142, 1186, 1383, 1443, 1506
MlyI GAGTC 4 cut(s) 261, 791, 1191, 1510
MmeI TCCRAC 4 cut(s) 225, 244, 815, 1664
Mph1103I ATGCAT 1 cut(s) 1675
MroI TCCGGA 1 cut(s) 628
MroXI GAANNNNTTC 1 cut(s) 1230
MseI TTAA 2 cut(s) 1146, 1724
MslI CAYNNNNRTG 2 cut(s) 95, 1163
MspA1I CMGCKG 1 cut(s) 732
MspI CCGG 3 cut(s) 278, 629, 1183
MspR9I CCNGG 1 cut(s) 494
MvaI CCWGG 1 cut(s) 494
MvnI CGCG 1 cut(s) 1047
MwoI GCNNNNNNNGC 5 cut(s) 306, 385, 390, 657, 1858
NcoI CCATGG 1 cut(s) 1809
NdeI CATATG 1 cut(s) 368
NdeII GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
NlaIII CATG 7 cut(s) 300, 388, 706, 1289, 1643, 1677, 1813
NlaIV GGNNCC 5 cut(s) 214, 374, 432, 1533, 1900
NmuCI GTSAC 4 cut(s) 73, 871, 1156, 1942
NsiI ATGCAT 1 cut(s) 1675
NspI RCATGY 1 cut(s) 388
OliI CACNNNNGTG 1 cut(s) 1163
PaeI GCATGC 1 cut(s) 388
PaeR7I CTCGAG 1 cut(s) 422
PagI TCATGA 1 cut(s) 1639
PaqCI CACCTGC 1 cut(s) 530
PcsI WCGNNNNNNNCGW 2 cut(s) 243, 420
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 6 cut(s) 29, 240, 400, 1121, 1370, 1715
PflMI CCANNNNNTGG 1 cut(s) 369
PkrI GCNGC 6 cut(s) 88, 155, 535, 538, 1785, 1816
PleI GAGTC 4 cut(s) 261, 790, 1191, 1509
PpsI GAGTC 4 cut(s) 261, 790, 1191, 1509
Psp6I CCWGG 1 cut(s) 492
PspEI GGTNACC 1 cut(s) 1156
PspFI CCCAGC 1 cut(s) 728
PspGI CCWGG 1 cut(s) 492
PspN4I GGNNCC 5 cut(s) 214, 374, 432, 1533, 1900
PspPI GGNCC 1 cut(s) 178
PspXI VCTCGAGB 1 cut(s) 422
PstI CTGCAG 1 cut(s) 538
PstNI CAGNNNCTG 1 cut(s) 26
PsuI RGATCY 3 cut(s) 23, 292, 1657
PvuII CAGCTG 1 cut(s) 732
RsaI GTAC 3 cut(s) 569, 894, 1696
RsaNI GTAC 3 cut(s) 568, 893, 1695
RseI CAYNNNNRTG 2 cut(s) 95, 1163
SaqAI TTAA 2 cut(s) 1146, 1724
SatI GCNGC 6 cut(s) 87, 154, 534, 537, 1784, 1815
Sau3AI GATC 9 cut(s) 23, 292, 772, 1267, 1282, 1312, 1396, 1480, 1657
Sau96I GGNCC 1 cut(s) 178
SchI GAGTC 4 cut(s) 261, 791, 1191, 1510
ScrFI CCNGG 1 cut(s) 494
SduI GDGCHC 1 cut(s) 626
SfaNI GCATC 3 cut(s) 123, 914, 964
SfcI CTRYAG 2 cut(s) 271, 534
Sfr274I CTCGAG 1 cut(s) 422
SlaI CTCGAG 1 cut(s) 422
SmiMI CAYNNNNRTG 2 cut(s) 95, 1163
SmlI CTYRAG 2 cut(s) 422, 1847
SmoI CTYRAG 2 cut(s) 422, 1847
SpeI ACTAGT 1 cut(s) 898
SphI GCATGC 1 cut(s) 388
Sse9I AATT 9 cut(s) 736, 816, 960, 1018, 1142, 1186, 1383, 1443, 1506
SsiI CCGC 3 cut(s) 87, 228, 1047
SspI AATATT 1 cut(s) 36
SspMI CTAG 9 cut(s) 110, 500, 849, 899, 1116, 1235, 1407, 1421, 1836
StyD4I CCNGG 1 cut(s) 492
StyI CCWWGG 3 cut(s) 109, 1201, 1809
TaaI ACNGT 5 cut(s) 206, 253, 856, 1523, 1589
TaiI ACGT 2 cut(s) 1578, 1886
TaqI TCGA 5 cut(s) 398, 423, 602, 1315, 1504
TasI AATT 9 cut(s) 736, 816, 960, 1018, 1142, 1186, 1383, 1443, 1506
TatI WGTACW 1 cut(s) 567
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 6 cut(s) 29, 240, 400, 1121, 1370, 1715
Tru1I TTAA 2 cut(s) 1146, 1724
Tru9I TTAA 2 cut(s) 1146, 1724
TscAI CASTG 2 cut(s) 626, 1107
TseFI GTSAC 4 cut(s) 73, 871, 1156, 1942
TseI GCWGC 5 cut(s) 153, 533, 536, 1783, 1814
Tsp45I GTSAC 4 cut(s) 73, 871, 1156, 1942
TspDTI ATGAA 5 cut(s) 498, 972, 1239, 1448, 1656
TspGWI ACGGA 2 cut(s) 252, 1625
TspRI CASTG 2 cut(s) 626, 1107
Van91I CCANNNNNTGG 1 cut(s) 369
VneI GTGCAC 1 cut(s) 622
XapI RAATTY 2 cut(s) 1142, 1186
XbaI TCTAGA 1 cut(s) 1115
XceI RCATGY 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 2 cut(s) 605, 1915
XhoI CTCGAG 1 cut(s) 422
XmaJI CCTAGG 1 cut(s) 109
XmiI GTMKAC 3 cut(s) 274, 785, 1239
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 9 cut(s) 110, 500, 849, 899, 1116, 1235, 1407, 1421, 1836
Zsp2I ATGCAT 1 cut(s) 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.