FvH4_2g29878

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
23163468 .. 23165976
2509 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29878.t1

Sequence Viewer

Length: 1368 bp
ATGGAGAATTTTGTATCATTCCTTTCTATACAAGCACTTCATGTGTTACTGATCATCATCATCACTACTGAAGCACTTGATCTACCTCCCAATGGTGACACCAACTTCTGTTACAACGACAGAGGCAACTACACCGATGGTAGTGTCTACCAGACAAACCTCAACGGCATGCTCAGCTATCTCATCTCCAACAGAAACGGCACCGGGTTTTACAGTTCTTCCAAACTCTCAGAAGACGAACAAGTTTACGCCACCGGAGTTTGTAGAGGAGATGCGAAGGTGGATGCTTGCGGCAAATGCCTTAGCGACTCCACATATCTCCTTACCAAGTCTTGCCCTAACCAGAAGGAGGCTCTTGGATGCTTCGACAACTGCACTTTACGCTACTCAAATCGGTCCCTGTACGGCGTCATGGAATCCAGTCCTGCTTTGATCTCCTATAACCTAAACAACGTGTCATCGTCGTTAGATAGAGTTGAGGAGTTCAATCAACTGTTCAGTACGCTATTGGGGCGATTGACGACTGAAGCCGCGGCCGGCGGTGATGAGCTCAAGTATGCATTTGGAAATGTAAATGCTTCAATGGTTAATAAAACGATATATGCTCTCGCGCAGTGCACACCAGATTTGACGGAGAAAGACTGCAAGAGCTGCTTGGACGATGCTGTTGTAGAAAAGGAAAAATTTTATTGGAGTATTGGAGGGAGAGTTTGTACACCCAGTTGTTACTTTAGGTTCGAGGTGATCCCTTTCCTAGAACCGCAGGAAGAGAAGGCTGTTGCGGTTCCTTTACCATCAACCAATAACACAGTTTCATTGGGAGTAGGAAATAAGCGAACTATTCGATTTCGGACTATTATCGTTATTGTTGTGGCAATTGCTGCTTTTCTAGCAGTGCTGGTTATATCCATCTGCATTTTCCTGAGCATAAGGAAGACAAAGAAAAAACTTGGAGGTTCCTCAGATGAAATTGGAAGTGCAGAAGCCTTGCAATTCGACTTTGGCTCCATTAAGGTTGCTACAAATAACTTCTCAGATGAAAATAAACTCGGAAGAGGTGGATTTGGTGTCGTCTATAAGGGTAGACTTTTCAGTAAAGAATATATAGCAGTAAAAAGGCTTTCTATTGATTCTAAACAAGGAGATGAAGAATTCAAGAATGAGGTATTGTTAGTGGCAAGGCTTCAGCACCGCAATTTGGTTAAGCTCCTAGGTTTCAGTATGGAAGGAAATGAGAGGCTTCTTGTTTATGAGTTTCTCCCTAACGCAAGCCTCGATCAATTTATATTTGGCCTGGAGAAATTGGAGGGAAGGCACAGCTCCAAGTTTAATAGACTCAACCTTGATGCCTGCAGTTTCAAACACTGA

Protein Analysis

456

Amino Acids

50.39

Weight (kDa)

6.2

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 37 - 132 2.8e-19 Salt stress response/antifungal
Stress-antifung PF01657 158 - 247 7.7e-12 Salt stress response/antifungal
Pkinase PF00069 345 - 430 5e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 347 - 429 1.9e-13 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 200
AccI GTMKAC 2 cut(s) 147, 1084
AccII CGCG 2 cut(s) 533, 611
AciI CCGC 7 cut(s) 291, 531, 533, 540, 761, 782, 1192
AclWI GGATC 1 cut(s) 739
AcoI YGGCCR 1 cut(s) 534
AcsI RAATTY 3 cut(s) 7, 683, 1151
AcuI CTGAAG 3 cut(s) 90, 546, 1169
AcyI GRCGYC 1 cut(s) 408
AfaI GTAC 3 cut(s) 404, 502, 715
AfiI CCNNNNNNNGG 3 cut(s) 92, 349, 1198
AflIII ACRYGT 1 cut(s) 453
AgsI TTSAA 4 cut(s) 487, 582, 1156, 1360
AjnI CCWGG 1 cut(s) 1293
AluBI AGCT 5 cut(s) 177, 550, 651, 1207, 1320
AluI AGCT 5 cut(s) 177, 550, 651, 1207, 1320
Alw21I GWGCWC 2 cut(s) 552, 620
Alw44I GTGCAC 1 cut(s) 616
AlwI GGATC 1 cut(s) 739
AoxI GGCC 2 cut(s) 534, 1291
ApaLI GTGCAC 1 cut(s) 616
ApeKI GCWGC 2 cut(s) 651, 881
ApoI RAATTY 3 cut(s) 7, 683, 1151
AspA2I CCTAGG 1 cut(s) 1210
AspLEI GCGC 1 cut(s) 613
AspS9I GGNCC 1 cut(s) 396
AsuC2I CCSGG 1 cut(s) 205
AsuHPI GGTGA 3 cut(s) 107, 554, 754
AvaII GGWCC 1 cut(s) 396
AvrII CCTAGG 1 cut(s) 1210
BaeGI GKGCMC 1 cut(s) 620
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 1 cut(s) 552
BbsI GAAGAC 2 cut(s) 240, 941
Bbv12I GWGCWC 2 cut(s) 552, 620
BbvI GCAGC 2 cut(s) 638, 868
BccI CCATC 3 cut(s) 131, 802, 917
BceAI ACGGC 3 cut(s) 181, 214, 421
BciT130I CCWGG 1 cut(s) 1295
BclI TGATCA 1 cut(s) 51
BcnI CCSGG 1 cut(s) 205
BfaI CTAG 3 cut(s) 755, 890, 1211
BfmI CTRYAG 1 cut(s) 1351
BisI GCNGC 5 cut(s) 292, 531, 534, 652, 882
BlnI CCTAGG 1 cut(s) 1210
BlpI GCTNAGC 1 cut(s) 173
BlsI GCNGC 5 cut(s) 293, 532, 535, 653, 883
Bme1390I CCNGG 2 cut(s) 205, 1295
Bme18I GGWCC 1 cut(s) 396
BmgT120I GGNCC 1 cut(s) 396
BmiI GGNNCC 5 cut(s) 202, 398, 786, 958, 1006
BmrFI CCNGG 2 cut(s) 205, 1295
BmrI ACTGGG 1 cut(s) 714
BmsI GCATC 5 cut(s) 262, 274, 350, 652, 1336
BmuI ACTGGG 1 cut(s) 714
BpiI GAAGAC 2 cut(s) 240, 941
BpmI CTGGAG 1 cut(s) 1316
Bpu10I CCTNAGC 2 cut(s) 302, 923
Bpu1102I GCTNAGC 1 cut(s) 173
BpuEI CTTGAG 1 cut(s) 536
BpuMI CCSGG 1 cut(s) 205
BsaBI GATNNNNATC 1 cut(s) 56
BsaHI GRCGYC 1 cut(s) 408
BsaJI CCNNGG 2 cut(s) 531, 1210
BsaWI WCCGGW 1 cut(s) 254
BsaXI ACNNNNNCTCC 6 cut(s) 693, 697, 723, 727, 989, 1019
Bsc4I CCNNNNNNNGG 3 cut(s) 92, 349, 1198
Bse118I RCCGGY 1 cut(s) 536
Bse1I ACTGG 2 cut(s) 420, 720
Bse8I GATNNNNATC 1 cut(s) 56
BseBI CCWGG 1 cut(s) 1295
BseDI CCNNGG 2 cut(s) 531, 1210
BseGI GGATG 2 cut(s) 289, 365
BseJI GATNNNNATC 1 cut(s) 56
BseLI CCNNNNNNNGG 3 cut(s) 92, 349, 1198
BseMII CTCAG 5 cut(s) 187, 243, 914, 975, 1047
BseNI ACTGG 2 cut(s) 420, 720
BseRI GAGGAG 2 cut(s) 282, 494
BseSI GKGCMC 1 cut(s) 620
BseX3I CGGCCG 1 cut(s) 534
BseXI GCAGC 2 cut(s) 638, 868
BsgI GTGCAG 2 cut(s) 358, 999
Bsh1236I CGCG 2 cut(s) 533, 611
Bsh1285I CGRYCG 1 cut(s) 537
BshFI GGCC 2 cut(s) 536, 1293
BshNI GGYRCC 1 cut(s) 200
BsiEI CGRYCG 1 cut(s) 537
BsiHKAI GWGCWC 2 cut(s) 552, 620
BsiSI CCGG 3 cut(s) 204, 255, 537
BslFI GGGAC 1 cut(s) 382
BslI CCNNNNNNNGG 3 cut(s) 92, 349, 1198
BsmFI GGGAC 1 cut(s) 382
BsnI GGCC 2 cut(s) 536, 1293
Bsp1286I GDGCHC 2 cut(s) 552, 620
Bsp1407I TGTACA 1 cut(s) 713
Bsp143I GATC 5 cut(s) 51, 79, 432, 744, 1276
Bsp1720I GCTNAGC 1 cut(s) 173
BspACI CCGC 7 cut(s) 291, 531, 533, 540, 761, 782, 1192
BspANI GGCC 2 cut(s) 536, 1293
BspCNI CTCAG 5 cut(s) 186, 242, 915, 974, 1046
BspFNI CGCG 2 cut(s) 533, 611
BspLI GGNNCC 5 cut(s) 202, 398, 786, 958, 1006
BspMAI CTGCAG 1 cut(s) 1355
BspPI GGATC 1 cut(s) 739
BspT107I GGYRCC 1 cut(s) 200
BsrFI RCCGGY 1 cut(s) 536
BsrGI TGTACA 1 cut(s) 713
BsrI ACTGG 2 cut(s) 420, 720
BssAI RCCGGY 1 cut(s) 536
BssECI CCNNGG 2 cut(s) 531, 1210
BssMI GATC 5 cut(s) 51, 79, 432, 744, 1276
BssNI GRCGYC 1 cut(s) 408
BssT1I CCWWGG 1 cut(s) 1210
Bst2UI CCWGG 1 cut(s) 1295
Bst4CI ACNGT 3 cut(s) 215, 495, 811
Bst6I CTCTTC 2 cut(s) 762, 1048
BstACI GRCGYC 1 cut(s) 408
BstAPI GCANNNNNTGC 2 cut(s) 651, 881
BstAUI TGTACA 1 cut(s) 713
BstC8I GCNNGC 5 cut(s) 170, 289, 538, 1270, 1351
BstDEI CTNAG 6 cut(s) 173, 229, 302, 923, 961, 1033
BstDSI CCRYGG 1 cut(s) 531
BstF5I GGATG 2 cut(s) 289, 365
BstFNI CGCG 2 cut(s) 533, 611
BstHHI GCGC 1 cut(s) 613
BstKTI GATC 5 cut(s) 54, 82, 435, 747, 1279
BstMBI GATC 5 cut(s) 51, 79, 432, 744, 1276
BstMCI CGRYCG 1 cut(s) 537
BstMWI GCNNNNNNNGC 7 cut(s) 174, 297, 381, 511, 651, 881, 890
BstNI CCWGG 1 cut(s) 1295
BstNSI RCATGY 1 cut(s) 172
BstSCI CCNGG 2 cut(s) 203, 1293
BstSFI CTRYAG 1 cut(s) 1351
BstSLI GKGCMC 1 cut(s) 620
BstUI CGCG 2 cut(s) 533, 611
BstV1I GCAGC 2 cut(s) 638, 868
BstV2I GAAGAC 2 cut(s) 240, 941
BstZI CGGCCG 1 cut(s) 534
BsuRI GGCC 2 cut(s) 536, 1293
BtgI CCRYGG 1 cut(s) 531
BtsCI GGATG 2 cut(s) 289, 365
BtsI GCAGTG 2 cut(s) 620, 900
BtsIMutI CAGTG 3 cut(s) 620, 900, 1363
Cac8I GCNNGC 5 cut(s) 170, 289, 538, 1270, 1351
CfoI GCGC 1 cut(s) 613
Cfr10I RCCGGY 1 cut(s) 536
Cfr13I GGNCC 1 cut(s) 396
Cfr42I CCGCGG 1 cut(s) 534
CseI GACGC 1 cut(s) 397
Csp6I GTAC 3 cut(s) 403, 501, 714
CviAII CATG 3 cut(s) 41, 169, 412
CviQI GTAC 3 cut(s) 403, 501, 714
DdeI CTNAG 6 cut(s) 173, 229, 302, 923, 961, 1033
DpnI GATC 5 cut(s) 53, 81, 434, 746, 1278
DpnII GATC 5 cut(s) 51, 79, 432, 744, 1276
EaeI YGGCCR 1 cut(s) 534
EagI CGGCCG 1 cut(s) 534
Eam1104I CTCTTC 2 cut(s) 762, 1048
EarI CTCTTC 2 cut(s) 762, 1048
Ecl136II GAGCTC 1 cut(s) 550
EclXI CGGCCG 1 cut(s) 534
Eco130I CCWWGG 1 cut(s) 1210
Eco24I GRGCYC 1 cut(s) 552
Eco47I GGWCC 1 cut(s) 396
Eco52I CGGCCG 1 cut(s) 534
Eco53kI GAGCTC 1 cut(s) 550
Eco57I CTGAAG 3 cut(s) 90, 546, 1169
EcoICRI GAGCTC 1 cut(s) 550
EcoRI GAATTC 1 cut(s) 1151
EcoRII CCWGG 1 cut(s) 1293
EcoT14I CCWWGG 1 cut(s) 1210
EcoT22I ATGCAT 1 cut(s) 562
EcoT38I GRGCYC 1 cut(s) 552
ErhI CCWWGG 1 cut(s) 1210
FaeI CATG 3 cut(s) 44, 172, 415
FalI AAGNNNNNCTT 2 cut(s) 638, 670
FaqI GGGAC 1 cut(s) 382
FatI CATG 3 cut(s) 40, 168, 411
FbaI TGATCA 1 cut(s) 51
FblI GTMKAC 2 cut(s) 147, 1084
Fnu4HI GCNGC 5 cut(s) 292, 531, 534, 652, 882
FokI GGATG 2 cut(s) 296, 372
FriOI GRGCYC 1 cut(s) 552
Fsp4HI GCNGC 5 cut(s) 292, 531, 534, 652, 882
FspBI CTAG 3 cut(s) 755, 890, 1211
GlaI GCGC 1 cut(s) 612
GluI GCNGC 5 cut(s) 292, 531, 534, 652, 882
GsuI CTGGAG 1 cut(s) 1316
HaeIII GGCC 2 cut(s) 536, 1293
HapII CCGG 3 cut(s) 204, 255, 537
HgaI GACGC 1 cut(s) 397
HhaI GCGC 1 cut(s) 613
Hin1I GRCGYC 1 cut(s) 408
Hin1II CATG 3 cut(s) 44, 172, 415
Hin6I GCGC 1 cut(s) 611
HinP1I GCGC 1 cut(s) 611
HinfI GANTC 4 cut(s) 308, 416, 1130, 1335
HpaII CCGG 3 cut(s) 204, 255, 537
HphI GGTGA 3 cut(s) 107, 554, 754
Hpy166II GTNNAC 5 cut(s) 148, 247, 618, 716, 1085
Hpy188I TCNGA 5 cut(s) 232, 852, 964, 1036, 1052
Hpy188III TCNNGA 2 cut(s) 922, 1156
Hpy8I GTNNAC 5 cut(s) 148, 247, 618, 716, 1085
Hpy99I CGWCG 1 cut(s) 466
HpyAV CCTTC 5 cut(s) 271, 340, 766, 1220, 1305
HpyCH4III ACNGT 3 cut(s) 215, 495, 811
HpyCH4IV ACGT 1 cut(s) 453
HpyCH4V TGCA 8 cut(s) 375, 560, 618, 645, 915, 980, 991, 1353
HpyF10VI GCNNNNNNNGC 7 cut(s) 174, 297, 381, 511, 651, 881, 890
HpyF3I CTNAG 6 cut(s) 173, 229, 302, 923, 961, 1033
HpySE526I ACGT 1 cut(s) 453
Hsp92I GRCGYC 1 cut(s) 408
Hsp92II CATG 3 cut(s) 44, 172, 415
HspAI GCGC 1 cut(s) 611
KroI GCCGGC 1 cut(s) 536
KroNI GCCGGC 1 cut(s) 538
Ksp22I TGATCA 1 cut(s) 51
KspI CCGCGG 1 cut(s) 534
Kzo9I GATC 5 cut(s) 51, 79, 432, 744, 1276
LmnI GCTCC 3 cut(s) 1010, 1212, 1325
Lsp1109I GCAGC 2 cut(s) 638, 868
LweI GCATC 5 cut(s) 262, 274, 350, 652, 1336
MaeI CTAG 3 cut(s) 755, 890, 1211
MaeII ACGT 1 cut(s) 453
MaeIII GTNAC 4 cut(s) 45, 95, 110, 725
MalI GATC 5 cut(s) 53, 81, 434, 746, 1278
MboI GATC 5 cut(s) 51, 79, 432, 744, 1276
MboII GAAGA 6 cut(s) 210, 245, 779, 946, 1065, 1160
MfeI CAATTG 1 cut(s) 876
MhlI GDGCHC 2 cut(s) 552, 620
MluCI AATT 9 cut(s) 7, 683, 876, 969, 992, 1151, 1195, 1280, 1301
MlyI GAGTC 2 cut(s) 302, 1329
MmeI TCCRAC 1 cut(s) 213
Mph1103I ATGCAT 1 cut(s) 562
MroNI GCCGGC 1 cut(s) 536
MseI TTAA 4 cut(s) 588, 1011, 1203, 1329
MspA1I CMGCKG 1 cut(s) 533
MspI CCGG 3 cut(s) 204, 255, 537
MspR9I CCNGG 2 cut(s) 205, 1295
MunI CAATTG 1 cut(s) 876
MvaI CCWGG 1 cut(s) 1295
MvnI CGCG 2 cut(s) 533, 611
MwoI GCNNNNNNNGC 7 cut(s) 174, 297, 381, 511, 651, 881, 890
NaeI GCCGGC 1 cut(s) 538
NciI CCSGG 1 cut(s) 205
NdeII GATC 5 cut(s) 51, 79, 432, 744, 1276
NgoMIV GCCGGC 1 cut(s) 536
NlaIII CATG 3 cut(s) 44, 172, 415
NlaIV GGNNCC 5 cut(s) 202, 398, 786, 958, 1006
NmuCI GTSAC 1 cut(s) 95
NsiI ATGCAT 1 cut(s) 562
NspI RCATGY 1 cut(s) 172
PaeI GCATGC 1 cut(s) 172
PcsI WCGNNNNNNNCGW 1 cut(s) 1272
PdiI GCCGGC 1 cut(s) 538
PfeI GAWTC 2 cut(s) 416, 1130
PkrI GCNGC 5 cut(s) 293, 532, 535, 653, 883
PleI GAGTC 2 cut(s) 302, 1329
PpsI GAGTC 2 cut(s) 302, 1329
Psp124BI GAGCTC 1 cut(s) 552
Psp6I CCWGG 1 cut(s) 1293
PspGI CCWGG 1 cut(s) 1293
PspN4I GGNNCC 5 cut(s) 202, 398, 786, 958, 1006
PspPI GGNCC 1 cut(s) 396
PstI CTGCAG 1 cut(s) 1355
RsaI GTAC 3 cut(s) 404, 502, 715
RsaNI GTAC 3 cut(s) 403, 501, 714
SacI GAGCTC 1 cut(s) 552
SacII CCGCGG 1 cut(s) 534
SaqAI TTAA 4 cut(s) 588, 1011, 1203, 1329
SatI GCNGC 5 cut(s) 292, 531, 534, 652, 882
Sau3AI GATC 5 cut(s) 51, 79, 432, 744, 1276
Sau96I GGNCC 1 cut(s) 396
SchI GAGTC 2 cut(s) 302, 1329
ScrFI CCNGG 2 cut(s) 205, 1295
SduI GDGCHC 2 cut(s) 552, 620
SfaNI GCATC 5 cut(s) 262, 274, 350, 652, 1336
SfcI CTRYAG 1 cut(s) 1351
Sfr303I CCGCGG 1 cut(s) 534
SgrBI CCGCGG 1 cut(s) 534
SinI GGWCC 1 cut(s) 396
SmlI CTYRAG 1 cut(s) 551
SmoI CTYRAG 1 cut(s) 551
SphI GCATGC 1 cut(s) 172
Sse9I AATT 9 cut(s) 7, 683, 876, 969, 992, 1151, 1195, 1280, 1301
SsiI CCGC 7 cut(s) 291, 531, 533, 540, 761, 782, 1192
SspMI CTAG 3 cut(s) 755, 890, 1211
SstI GAGCTC 1 cut(s) 552
StyD4I CCNGG 2 cut(s) 203, 1293
StyI CCWWGG 1 cut(s) 1210
TaaI ACNGT 3 cut(s) 215, 495, 811
TaiI ACGT 1 cut(s) 456
TaqI TCGA 5 cut(s) 366, 738, 844, 996, 1275
TaqII GACCGA 1 cut(s) 384
TasI AATT 9 cut(s) 7, 683, 876, 969, 992, 1151, 1195, 1280, 1301
TatI WGTACW 1 cut(s) 713
TauI GCSGC 3 cut(s) 294, 533, 536
TfiI GAWTC 2 cut(s) 416, 1130
Tru1I TTAA 4 cut(s) 588, 1011, 1203, 1329
Tru9I TTAA 4 cut(s) 588, 1011, 1203, 1329
TscAI CASTG 2 cut(s) 620, 900
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 2 cut(s) 651, 881
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 5 cut(s) 29, 804, 981, 1053, 1161
TspGWI ACGGA 1 cut(s) 647
TspRI CASTG 2 cut(s) 620, 900
VneI GTGCAC 1 cut(s) 616
VpaK11BI GGWCC 1 cut(s) 396
XapI RAATTY 3 cut(s) 7, 683, 1151
XceI RCATGY 1 cut(s) 172
XmaJI CCTAGG 1 cut(s) 1210
XmiI GTMKAC 2 cut(s) 147, 1084
XspI CTAG 3 cut(s) 755, 890, 1211
Zsp2I ATGCAT 1 cut(s) 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.