Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Forward (+)

75452702 .. 75454555

Gene Structure 1854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34501

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGCATTTGTATTTACGCTCATCCGAAGTGAGAATTGCAGAAACATATGGCCTGCAAGTCCCCTTTCGGTCTATTAGAGATGCAACGAATGACTTTTCTGAATCAAACAAGCTCGGACGGGGTGGATTTGGTGTTGTTTACAGAGGCAGGCTTTGGGACAAAATAGATGTAGCAGTGAAAAGGCTTTCTAGAGATTCTTCACAAGGAGATATAGAATTCAAAAATGAGGTTGAACTCGTGGCCAAACTTCAGCACCGGAATTTAGTTAGGCTCCTTGGTTTCTGCCTGGAACGAAGCGAAAGAATTCTTATCTATGAGTTTGTTCCAAACGCAAGTCTCGATCATTTCATATTTGATCCAATCAAGCGCGAACAGTTGGATTGGGATATTCGCTACAAGATCATAATAGGCATTGGGCGGGGACTCCTTTACCTTCATGAAGATTCCCGTCTAAAAATTATCCATCGTGATCTAAAAGCTAGTAACATTCTGTTAGATGCAGAAATGAACCCCAAAATTGCAGATTTCGGATTGGCAAGATTATTTGATACGGATCAAACACAAGGTGAAACTAATCGAATTGTGGGGACCTATGGATATATGGCTCCAGAGTATGTAATGCGTGGACACTTTTCGGTGAAGTCCGATGTTTACAGTTTTGGTGTGCTGGTTTTGGAGATAATAACCGGACAGAAAAATAGTTCTTTTCGGCATGAAGAAAGTGCAGAGGTTCTTCTAAGCTACGCCTGGAATAGTTGGAGGGAGGGGACAGCCTTAAACTTAATAGATCCCATGCTAAGAAGTGGTTTTTCAGGACCTGAAATAATGAGATCCATTCACATTGCATTGTTGTGTGTGCAACAAAATGTAGCTGCTAGGCCAACCATGGCTGCAGTTAACCACATGTACAGCAACAATTCTCTCAATCTCCCAGCACCCTCACAACCAGCATTCTTTATGCCTGGGGGCATTGGATCCTCATCCAACACATCGTCGGGAGGGGAGAACAAATCCAGAAACTTGATCCAAATTTCAGCACAGGATATGGATATGATTACGGAGCTATATCCTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

358

Amino Acids

40.57

Weight (kDa)

6.77

Isoelectric Point (pI)

47.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	33 - 240	1.6e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	35 - 298	1.4e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	369
AciI	CCGC	1 cut(s)	418
AclWI	GGATC	7 cut(s)	350, 561, 782, 825, 969, 982, 1018
AcoI	YGGCCR	1 cut(s)	240
AcsI	RAATTY	4 cut(s)	215, 259, 303, 1029
AcuI	CTGAAG	1 cut(s)	233
AdeI	CACNNNGTG	1 cut(s)	566
AfaI	GTAC	1 cut(s)	908
AflIII	ACRYGT	1 cut(s)	903
AgsI	TTSAA	2 cut(s)	220, 233
AjnI	CCWGG	3 cut(s)	285, 746, 961
AluBI	AGCT	5 cut(s)	112, 479, 741, 872, 1063
AluI	AGCT	5 cut(s)	112, 479, 741, 872, 1063
Alw26I	GTCTC	1 cut(s)	341
AlwI	GGATC	7 cut(s)	350, 561, 782, 825, 969, 982, 1018
AlwNI	CAGNNNCTG	1 cut(s)	818
AoxI	GGCC	3 cut(s)	49, 240, 878
ApeKI	GCWGC	2 cut(s)	872, 890
ApoI	RAATTY	4 cut(s)	215, 259, 303, 1029
Asp700I	GAANNNNTTC	1 cut(s)	303
AspLEI	GCGC	1 cut(s)	369
AspS9I	GGNCC	2 cut(s)	588, 815
AsuHPI	GGTGA	2 cut(s)	578, 649
AvaII	GGWCC	2 cut(s)	588, 815
BalI	TGGCCA	1 cut(s)	242
BamHI	GGATCC	1 cut(s)	974
BauI	CACGAG	1 cut(s)	236
BbvI	GCAGC	2 cut(s)	859, 877
BccI	CCATC	1 cut(s)	471
BciT130I	CCWGG	3 cut(s)	287, 748, 963
BcoDI	GTCTC	1 cut(s)	341
BfaI	CTAG	4 cut(s)	189, 480, 876, 1075
BfmI	CTRYAG	1 cut(s)	891
BisI	GCNGC	2 cut(s)	873, 891
BlsI	GCNGC	2 cut(s)	874, 892
Bme1390I	CCNGG	3 cut(s)	287, 748, 963
Bme18I	GGWCC	2 cut(s)	588, 815
BmgT120I	GGNCC	2 cut(s)	588, 815
BmiI	GGNNCC	4 cut(s)	272, 589, 606, 976
BmrFI	CCNGG	3 cut(s)	287, 748, 963
BmsI	GCATC	2 cut(s)	70, 487
BpmI	CTGGAG	1 cut(s)	591
BsaBI	GATNNNNATC	2 cut(s)	552, 979
BsaJI	CCNNGG	3 cut(s)	274, 885, 962
BsaWI	WCCGGW	2 cut(s)	255, 686
Bse3DI	GCAATG	1 cut(s)	840
Bse8I	GATNNNNATC	2 cut(s)	552, 979
BseBI	CCWGG	3 cut(s)	287, 748, 963
BseDI	CCNNGG	3 cut(s)	274, 885, 962
BseGI	GGATG	2 cut(s)	20, 980
BseJI	GATNNNNATC	2 cut(s)	552, 979
BseMI	GCAATG	1 cut(s)	840
BseXI	GCAGC	2 cut(s)	859, 877
BseYI	CCCAGC	1 cut(s)	931
BsgI	GTGCAG	1 cut(s)	744
Bsh1236I	CGCG	1 cut(s)	369
BshFI	GGCC	3 cut(s)	51, 242, 880
BsiSI	CCGG	2 cut(s)	256, 687
BslFI	GGGAC	5 cut(s)	44, 170, 435, 601, 781
BsmAI	GTCTC	1 cut(s)	341
BsmFI	GGGAC	5 cut(s)	44, 170, 435, 601, 781
BsmI	GAATGC	1 cut(s)	950
BsnI	GGCC	3 cut(s)	51, 242, 880
Bsp1407I	TGTACA	1 cut(s)	906
Bsp143I	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
Bsp19I	CCATGG	1 cut(s)	885
BspACI	CCGC	1 cut(s)	418
BspANI	GGCC	3 cut(s)	51, 242, 880
BspFNI	CGCG	1 cut(s)	369
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	4 cut(s)	272, 589, 606, 976
BspMAI	CTGCAG	1 cut(s)	895
BspPI	GGATC	7 cut(s)	350, 561, 782, 825, 969, 982, 1018
BsrDI	GCAATG	1 cut(s)	840
BsrGI	TGTACA	1 cut(s)	906
BssECI	CCNNGG	3 cut(s)	274, 885, 962
BssMI	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
BssSI	CACGAG	1 cut(s)	236
BssT1I	CCWWGG	2 cut(s)	274, 885
Bst2BI	CACGAG	1 cut(s)	236
Bst2UI	CCWGG	3 cut(s)	287, 748, 963
Bst4CI	ACNGT	2 cut(s)	375, 656
BstAUI	TGTACA	1 cut(s)	906
BstC8I	GCNNGC	2 cut(s)	53, 149
BstDEI	CTNAG	2 cut(s)	737, 797
BstDSI	CCRYGG	1 cut(s)	885
BstF5I	GGATG	2 cut(s)	20, 980
BstFNI	CGCG	1 cut(s)	369
BstHHI	GCGC	1 cut(s)	369
BstKTI	GATC	9 cut(s)	343, 358, 402, 472, 556, 790, 833, 977, 1026
BstMAI	GTCTC	1 cut(s)	341
BstMBI	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
BstNI	CCWGG	3 cut(s)	287, 748, 963
BstNSI	RCATGY	1 cut(s)	907
BstSCI	CCNGG	3 cut(s)	285, 746, 961
BstSFI	CTRYAG	1 cut(s)	891
BstUI	CGCG	1 cut(s)	369
BstV1I	GCAGC	2 cut(s)	859, 877
BstX2I	RGATCY	3 cut(s)	787, 830, 974
BstYI	RGATCY	3 cut(s)	787, 830, 974
BsuRI	GGCC	3 cut(s)	51, 242, 880
BtgI	CCRYGG	1 cut(s)	885
BtsCI	GGATG	2 cut(s)	20, 980
BtsI	GCAGTG	1 cut(s)	180
BtsIMutI	CAGTG	1 cut(s)	180
Cac8I	GCNNGC	2 cut(s)	53, 149
CaiI	CAGNNNCTG	1 cut(s)	818
CciI	TCATGA	1 cut(s)	436
CfoI	GCGC	1 cut(s)	369
Cfr13I	GGNCC	2 cut(s)	588, 815
Csp6I	GTAC	1 cut(s)	907
CviAII	CATG	5 cut(s)	437, 713, 793, 886, 904
CviQI	GTAC	1 cut(s)	907
DdeI	CTNAG	2 cut(s)	737, 797
DpnI	GATC	9 cut(s)	342, 357, 401, 471, 555, 789, 832, 976, 1025
DpnII	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
DraIII	CACNNNGTG	1 cut(s)	566
EaeI	YGGCCR	1 cut(s)	240
Eco130I	CCWWGG	2 cut(s)	274, 885
Eco47I	GGWCC	2 cut(s)	588, 815
Eco57I	CTGAAG	1 cut(s)	233
EcoO109I	RGGNCCY	2 cut(s)	588, 815
EcoRI	GAATTC	2 cut(s)	215, 303
EcoRII	CCWGG	3 cut(s)	285, 746, 961
EcoT14I	CCWWGG	2 cut(s)	274, 885
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	274, 885
FaeI	CATG	5 cut(s)	440, 716, 796, 889, 907
FaqI	GGGAC	5 cut(s)	44, 170, 435, 601, 781
FatI	CATG	5 cut(s)	436, 712, 792, 885, 903
FauI	CCCGC	1 cut(s)	411
FauNDI	CATATG	1 cut(s)	46
Fnu4HI	GCNGC	2 cut(s)	873, 891
FokI	GGATG	2 cut(s)	7, 967
Fsp4HI	GCNGC	2 cut(s)	873, 891
FspBI	CTAG	4 cut(s)	189, 480, 876, 1075
GlaI	GCGC	1 cut(s)	368
GluI	GCNGC	2 cut(s)	873, 891
GsaI	CCCAGC	1 cut(s)	935
GsuI	CTGGAG	1 cut(s)	591
HaeIII	GGCC	3 cut(s)	51, 242, 880
HapII	CCGG	2 cut(s)	256, 687
HhaI	GCGC	1 cut(s)	369
Hin1II	CATG	5 cut(s)	440, 716, 796, 889, 907
Hin6I	GCGC	1 cut(s)	367
HinP1I	GCGC	1 cut(s)	367
HincII	GTYRAC	1 cut(s)	898
HindII	GTYRAC	1 cut(s)	898
HinfI	GANTC	4 cut(s)	101, 194, 423, 443
HpaI	GTTAAC	1 cut(s)	898
HpaII	CCGG	2 cut(s)	256, 687
HphI	GGTGA	2 cut(s)	578, 649
Hpy166II	GTNNAC	4 cut(s)	139, 626, 652, 898
Hpy188I	TCNGA	5 cut(s)	25, 100, 116, 530, 646
Hpy188III	TCNNGA	8 cut(s)	189, 338, 437, 467, 608, 813, 996, 1014
Hpy8I	GTNNAC	4 cut(s)	139, 626, 652, 898
Hpy99I	CGWCG	1 cut(s)	997
HpyAV	CCTTC	1 cut(s)	443
HpyCH4III	ACNGT	2 cut(s)	375, 656
HpyF3I	CTNAG	2 cut(s)	737, 797
Hsp92II	CATG	5 cut(s)	440, 716, 796, 889, 907
HspAI	GCGC	1 cut(s)	367
KspAI	GTTAAC	1 cut(s)	898
Kzo9I	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
LmnI	GCTCC	3 cut(s)	276, 610, 1060
Lsp1109I	GCAGC	2 cut(s)	859, 877
LweI	GCATC	2 cut(s)	70, 487
MaeI	CTAG	4 cut(s)	189, 480, 876, 1075
MaeIII	GTNAC	1 cut(s)	482
MalI	GATC	9 cut(s)	342, 357, 401, 471, 555, 789, 832, 976, 1025
MboI	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
MboII	GAAGA	4 cut(s)	189, 452, 725, 728
MflI	RGATCY	3 cut(s)	787, 830, 974
MlsI	TGGCCA	1 cut(s)	242
MluCI	AATT	9 cut(s)	33, 215, 259, 303, 456, 516, 579, 916, 1029
MluNI	TGGCCA	1 cut(s)	242
MlyI	GAGTC	1 cut(s)	417
MmeI	TCCRAC	3 cut(s)	357, 737, 1008
MnlI	CCTC	8 cut(s)	137, 220, 721, 753, 757, 949, 988, 992
Mox20I	TGGCCA	1 cut(s)	242
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	303
MscI	TGGCCA	1 cut(s)	242
MseI	TTAA	3 cut(s)	776, 782, 897
MslI	CAYNNNNRTG	1 cut(s)	850
Msp20I	TGGCCA	1 cut(s)	242
MspI	CCGG	2 cut(s)	256, 687
MspR9I	CCNGG	3 cut(s)	287, 748, 963
Mva1269I	GAATGC	1 cut(s)	950
MvaI	CCWGG	3 cut(s)	287, 748, 963
MvnI	CGCG	1 cut(s)	369
NcoI	CCATGG	1 cut(s)	885
NdeI	CATATG	1 cut(s)	46
NdeII	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
NlaIII	CATG	5 cut(s)	440, 716, 796, 889, 907
NlaIV	GGNNCC	4 cut(s)	272, 589, 606, 976
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	907
PagI	TCATGA	1 cut(s)	436
PciI	ACATGT	1 cut(s)	903
PcsI	WCGNNNNNNNCGW	1 cut(s)	336
PctI	GAATGC	1 cut(s)	950
PdmI	GAANNNNTTC	1 cut(s)	303
PfeI	GAWTC	3 cut(s)	101, 194, 443
PkrI	GCNGC	2 cut(s)	874, 892
PleI	GAGTC	1 cut(s)	417
PpsI	GAGTC	1 cut(s)	417
PpuMI	RGGWCCY	2 cut(s)	588, 815
PscI	ACATGT	1 cut(s)	903
Psp5II	RGGWCCY	2 cut(s)	588, 815
Psp6I	CCWGG	3 cut(s)	285, 746, 961
PspFI	CCCAGC	1 cut(s)	931
PspGI	CCWGG	3 cut(s)	285, 746, 961
PspN4I	GGNNCC	4 cut(s)	272, 589, 606, 976
PspPI	GGNCC	2 cut(s)	588, 815
PspPPI	RGGWCCY	2 cut(s)	588, 815
PstI	CTGCAG	1 cut(s)	895
PstNI	CAGNNNCTG	1 cut(s)	818
PsuI	RGATCY	3 cut(s)	787, 830, 974
RsaI	GTAC	1 cut(s)	908
RsaNI	GTAC	1 cut(s)	907
RseI	CAYNNNNRTG	1 cut(s)	850
SaqAI	TTAA	3 cut(s)	776, 782, 897
SatI	GCNGC	2 cut(s)	873, 891
Sau3AI	GATC	9 cut(s)	340, 355, 399, 469, 553, 787, 830, 974, 1023
Sau96I	GGNCC	2 cut(s)	588, 815
SchI	GAGTC	1 cut(s)	417
ScrFI	CCNGG	3 cut(s)	287, 748, 963
SfaNI	GCATC	2 cut(s)	70, 487
SfcI	CTRYAG	1 cut(s)	891
SinI	GGWCC	2 cut(s)	588, 815
SmiMI	CAYNNNNRTG	1 cut(s)	850
Sse9I	AATT	9 cut(s)	33, 215, 259, 303, 456, 516, 579, 916, 1029
SsiI	CCGC	1 cut(s)	418
SspMI	CTAG	4 cut(s)	189, 480, 876, 1075
StyD4I	CCNGG	3 cut(s)	285, 746, 961
StyI	CCWWGG	2 cut(s)	274, 885
TaaI	ACNGT	2 cut(s)	375, 656
TaqI	TCGA	2 cut(s)	339, 577
TaqII	GACCGA	1 cut(s)	57
TasI	AATT	9 cut(s)	33, 215, 259, 303, 456, 516, 579, 916, 1029
TatI	WGTACW	1 cut(s)	906
TfiI	GAWTC	3 cut(s)	101, 194, 443
Tru1I	TTAA	3 cut(s)	776, 782, 897
Tru9I	TTAA	3 cut(s)	776, 782, 897
TscAI	CASTG	1 cut(s)	180
TseI	GCWGC	2 cut(s)	872, 890
TspDTI	ATGAA	5 cut(s)	337, 425, 453, 521, 729
TspGWI	ACGGA	2 cut(s)	566, 1073
TspRI	CASTG	1 cut(s)	180
VpaK11BI	GGWCC	2 cut(s)	588, 815
XapI	RAATTY	4 cut(s)	215, 259, 303, 1029
XbaI	TCTAGA	1 cut(s)	188
XceI	RCATGY	1 cut(s)	907
XmnI	GAANNNNTTC	1 cut(s)	303
XspI	CTAG	4 cut(s)	189, 480, 876, 1075
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.