Rh5DG237500

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
27115062 .. 27135087
20026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG237500.1

Sequence Viewer

Length: 1401 bp
ATGAAATATGTGGTCTTGGATCCAAATCTTGTTTGCCGAGTTCATGAAATATCCCTAGACCAGCTTATTGCTCCCACCAAAGCCCAAGAGAACGGTGAATGCACTGATAAAGTTGAATATTGCTGGAAATGTTCCGATTACAGCCGTTATGCTAATGACAGCATCTACCAACAAAACCTCAACAGCGTCCTCTCCTCCTTCTCTTCCAGCCCTACCCAGAACCAAGCTGACGTTGGGTTTTACAACTCTTCTCTTGGCCAAGGCTCAGACATAGTGAATGCAATTGCATTGTGCAGAGGAGACCAAGGAGTCGAAGACTGTACTAGCTGTGTCAGAGACTCTACTGAGATTATCCTGCGAAATTGTTCGCAGAAAAAGGAAGCGATCTTATGGTCAGAGATTTGTATGGTACGGTACTCTCCAAACTTAATATTTGGTACTGTGGAAAAGGACCCAGTCATCCGTGCGGACAGCAAAAACAACGCGTTAAACGCGGAAGCGTTCGCGCAGGTGCTTAACCTCTTGTTGCAAAATTTACGTGACAGAGCTGCTTCAGGGAATTCTAGTGAAAAATTTGCAGCAGGACATGCAAAGACTGATGAAGGCCAAACAATATATGCACTTGTGCAGTGCACTCCGGATATAGACAAAGGAGATTGCAGTAATTGCCTTGGAAGTTGCATCTCTGATATTCCATCATGTTGTGATGGAAAGGAAGGAGCTCGAATTCTTAAACCAAGCTGTAATATAAGGTATGAGGTCAGTCGGTTCTATAAATCTGCAGTTGATTCAGCAGTAGATGTTTCAGCTCCTCCAGCAACTCCAACAACTCCAGAAACTCCAGCTCCACCTAAGCAAGGAAAGAAGAGTAACACAATAAAAACTATCATCATCATCATCAGTGTGGTTGTGATTGCTTTTGTGACTATGTTTCTGGGTGGCACTTGCATTTTCTTACAAGTTAAGAAACCATGGGTAAAACTTGAATATGATCGTATTTCACAAGAAATGAGTTTCGTGAATTCATTACAATATGACTTTGAAATTATAAGATCTGCAACGGATGACTTTTCTGATGCCAATAAGCTTGGTCAAGGTGGATTTGGAGATGTTTACAAGGGTAGGCTACTAAATGGACAATATATTGCTGTGAAAATGCTCTCTAAGAGTTCTAAACAAGGTGATCGTGAATTTAAAAATGAAGTCAGGTTACTTGCTCCGCTTCAACACAGGAACTTGGTAAAATTAGTAGGATTTTGCATAAAAGGAGGGGAAAGGCTCCTCATTTATGAATATGTACCTAATACAAGCCTTAATCACTACATTTTTGGTATGTTATCCTCTATTCCTCAGTATATAAATTTCATACTTATAATTTCTTTGAGATTTTATATATGTTAG

Protein Analysis

466

Amino Acids

51.65

Weight (kDa)

6.47

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 44 - 140 3.9e-20 Salt stress response/antifungal
Stress-antifung PF01657 160 - 253 1.6e-14 Salt stress response/antifungal
Pkinase PF00069 358 - 442 3.7e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 361 - 442 3.3e-16 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1049, 1373
AarI CACCTGC 1 cut(s) 499
AasI GACNNNNNNGTC 1 cut(s) 308
Acc36I ACCTGC 1 cut(s) 499
AccII CGCG 3 cut(s) 485, 494, 506
AccIII TCCGGA 1 cut(s) 637
AciI CCGC 3 cut(s) 467, 494, 1220
AclWI GGATC 2 cut(s) 14, 27
AcoI YGGCCR 1 cut(s) 256
AcsI RAATTY 7 cut(s) 532, 559, 572, 726, 1021, 1190, 1360
AcuI CTGAAG 1 cut(s) 537
AfaI GTAC 5 cut(s) 322, 411, 416, 439, 1299
AfiI CCNNNNNNNGG 1 cut(s) 857
AflIII ACRYGT 1 cut(s) 483
AgsI TTSAA 4 cut(s) 116, 986, 1043, 1226
AluBI AGCT 9 cut(s) 64, 227, 327, 548, 722, 741, 809, 845, 1087
AluI AGCT 9 cut(s) 64, 227, 327, 548, 722, 741, 809, 845, 1087
Alw21I GWGCWC 2 cut(s) 635, 724
Alw26I GTCTC 2 cut(s) 294, 330
Alw44I GTGCAC 1 cut(s) 631
AlwI GGATC 2 cut(s) 14, 27
Aor13HI TCCGGA 1 cut(s) 637
AoxI GGCC 2 cut(s) 256, 604
ApaLI GTGCAC 1 cut(s) 631
ApeKI GCWGC 2 cut(s) 548, 578
ApoI RAATTY 7 cut(s) 532, 559, 572, 726, 1021, 1190, 1360
Asp700I GAANNNNTTC 1 cut(s) 364
AspLEI GCGC 1 cut(s) 508
AspS9I GGNCC 1 cut(s) 451
AsuHPI GGTGA 2 cut(s) 107, 1193
AvaII GGWCC 1 cut(s) 451
BaeGI GKGCMC 1 cut(s) 635
BalI TGGCCA 1 cut(s) 258
BamHI GGATCC 1 cut(s) 19
BanII GRGCYC 1 cut(s) 724
BarI GAAGNNNNNNTAC 2 cut(s) 1194, 1226
BbsI GAAGAC 1 cut(s) 321
Bbv12I GWGCWC 2 cut(s) 635, 724
BbvI GCAGC 2 cut(s) 535, 590
BccI CCATC 2 cut(s) 701, 703
BceAI ACGGC 1 cut(s) 129
BcoDI GTCTC 2 cut(s) 294, 330
BfaI CTAG 3 cut(s) 56, 324, 564
BfmI CTRYAG 1 cut(s) 780
BfuAI ACCTGC 1 cut(s) 499
BglII AGATCT 1 cut(s) 1052
BisI GCNGC 2 cut(s) 549, 579
BlsI GCNGC 2 cut(s) 550, 580
Bme18I GGWCC 1 cut(s) 451
BmgT120I GGNCC 1 cut(s) 451
BmiI GGNNCC 3 cut(s) 21, 453, 1280
BmrI ACTGGG 1 cut(s) 449
BmsI GCATC 3 cut(s) 171, 690, 1066
BmuI ACTGGG 1 cut(s) 449
BpiI GAAGAC 1 cut(s) 321
BpmI CTGGAG 3 cut(s) 798, 816, 825
Bpu10I CCTNAGC 1 cut(s) 852
BsaAI YACGTR 1 cut(s) 539
BsaBI GATNNNNATC 1 cut(s) 24
BsaI GGTCTC 1 cut(s) 294
BsaJI CCNNGG 4 cut(s) 259, 304, 670, 971
BsaWI WCCGGW 1 cut(s) 637
BsaXI ACNNNNNCTCC 2 cut(s) 829, 859
Bsc4I CCNNNNNNNGG 1 cut(s) 857
Bse1I ACTGG 1 cut(s) 455
Bse8I GATNNNNATC 1 cut(s) 24
BseAI TCCGGA 1 cut(s) 637
BseDI CCNNGG 4 cut(s) 259, 304, 670, 971
BseGI GGATG 2 cut(s) 459, 1069
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 1 cut(s) 857
BseMII CTCAG 3 cut(s) 279, 336, 1364
BseNI ACTGG 1 cut(s) 455
BseRI GAGGAG 4 cut(s) 184, 312, 801, 1271
BseSI GKGCMC 1 cut(s) 635
BseXI GCAGC 2 cut(s) 535, 590
BsgI GTGCAG 2 cut(s) 313, 647
Bsh1236I CGCG 3 cut(s) 485, 494, 506
BshFI GGCC 2 cut(s) 258, 606
BsiHKAI GWGCWC 2 cut(s) 635, 724
BsiSI CCGG 1 cut(s) 638
BslI CCNNNNNNNGG 1 cut(s) 857
BsmAI GTCTC 2 cut(s) 294, 330
BsmI GAATGC 2 cut(s) 104, 283
BsnI GGCC 2 cut(s) 258, 606
Bso31I GGTCTC 1 cut(s) 294
Bsp1286I GDGCHC 2 cut(s) 635, 724
Bsp13I TCCGGA 1 cut(s) 637
Bsp143I GATC 5 cut(s) 19, 384, 991, 1052, 1183
Bsp19I CCATGG 1 cut(s) 971
BspACI CCGC 3 cut(s) 467, 494, 1220
BspANI GGCC 2 cut(s) 258, 606
BspCNI CTCAG 3 cut(s) 278, 337, 1363
BspEI TCCGGA 1 cut(s) 637
BspFNI CGCG 3 cut(s) 485, 494, 506
BspHI TCATGA 1 cut(s) 43
BspLI GGNNCC 3 cut(s) 21, 453, 1280
BspMAI CTGCAG 1 cut(s) 784
BspMI ACCTGC 1 cut(s) 499
BspPI GGATC 2 cut(s) 14, 27
BspTNI GGTCTC 1 cut(s) 294
BsrI ACTGG 1 cut(s) 455
BssECI CCNNGG 4 cut(s) 259, 304, 670, 971
BssMI GATC 5 cut(s) 19, 384, 991, 1052, 1183
BssT1I CCWWGG 4 cut(s) 259, 304, 670, 971
Bst4CI ACNGT 4 cut(s) 95, 320, 414, 442
Bst6I CTCTTC 3 cut(s) 208, 253, 860
BstAPI GCANNNNNTGC 2 cut(s) 587, 666
BstBAI YACGTR 1 cut(s) 539
BstDEI CTNAG 5 cut(s) 265, 345, 852, 1164, 1350
BstDSI CCRYGG 1 cut(s) 971
BstENI CCTNNNNNAGG 1 cut(s) 855
BstF5I GGATG 2 cut(s) 459, 1069
BstFNI CGCG 3 cut(s) 485, 494, 506
BstHHI GCGC 1 cut(s) 508
BstKTI GATC 5 cut(s) 22, 387, 994, 1055, 1186
BstMAI GTCTC 2 cut(s) 294, 330
BstMBI GATC 5 cut(s) 19, 384, 991, 1052, 1183
BstMWI GCNNNNNNNGC 4 cut(s) 491, 587, 666, 815
BstNSI RCATGY 1 cut(s) 590
BstSFI CTRYAG 1 cut(s) 780
BstSLI GKGCMC 1 cut(s) 635
BstUI CGCG 3 cut(s) 485, 494, 506
BstV1I GCAGC 2 cut(s) 535, 590
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 2 cut(s) 19, 1052
BstYI RGATCY 2 cut(s) 19, 1052
BsuRI GGCC 2 cut(s) 258, 606
BtgI CCRYGG 1 cut(s) 971
BtsCI GGATG 2 cut(s) 459, 1069
BtsI GCAGTG 1 cut(s) 635
BtsIMutI CAGTG 3 cut(s) 102, 635, 907
BveI ACCTGC 1 cut(s) 499
CciI TCATGA 1 cut(s) 43
CfoI GCGC 1 cut(s) 508
Cfr13I GGNCC 1 cut(s) 451
CseI GACGC 1 cut(s) 175
Csp6I GTAC 5 cut(s) 321, 410, 415, 438, 1298
CviAII CATG 4 cut(s) 44, 587, 699, 972
CviQI GTAC 5 cut(s) 321, 410, 415, 438, 1298
DdeI CTNAG 5 cut(s) 265, 345, 852, 1164, 1350
DpnI GATC 5 cut(s) 21, 386, 993, 1054, 1185
DpnII GATC 5 cut(s) 19, 384, 991, 1052, 1183
DraI TTTAAA 1 cut(s) 1195
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 1 cut(s) 256
Eam1104I CTCTTC 3 cut(s) 208, 253, 860
EarI CTCTTC 3 cut(s) 208, 253, 860
Ecl136II GAGCTC 1 cut(s) 722
Eco130I CCWWGG 4 cut(s) 259, 304, 670, 971
Eco24I GRGCYC 1 cut(s) 724
Eco31I GGTCTC 1 cut(s) 294
Eco47I GGWCC 1 cut(s) 451
Eco53kI GAGCTC 1 cut(s) 722
Eco57I CTGAAG 1 cut(s) 537
EcoICRI GAGCTC 1 cut(s) 722
EcoNI CCTNNNNNAGG 1 cut(s) 855
EcoO109I RGGNCCY 1 cut(s) 451
EcoRI GAATTC 3 cut(s) 559, 726, 1021
EcoT14I CCWWGG 4 cut(s) 259, 304, 670, 971
EcoT38I GRGCYC 1 cut(s) 724
ErhI CCWWGG 4 cut(s) 259, 304, 670, 971
FaeI CATG 4 cut(s) 47, 590, 702, 975
FatI CATG 4 cut(s) 43, 586, 698, 971
Fnu4HI GCNGC 2 cut(s) 549, 579
FokI GGATG 2 cut(s) 446, 1076
FriOI GRGCYC 1 cut(s) 724
Fsp4HI GCNGC 2 cut(s) 549, 579
FspBI CTAG 3 cut(s) 56, 324, 564
GlaI GCGC 1 cut(s) 507
GluI GCNGC 2 cut(s) 549, 579
GsuI CTGGAG 3 cut(s) 798, 816, 825
HaeIII GGCC 2 cut(s) 258, 606
HapII CCGG 1 cut(s) 638
HgaI GACGC 1 cut(s) 175
HhaI GCGC 1 cut(s) 508
Hin1II CATG 4 cut(s) 47, 590, 702, 975
Hin6I GCGC 1 cut(s) 506
HinP1I GCGC 1 cut(s) 506
HindIII AAGCTT 1 cut(s) 1085
HinfI GANTC 3 cut(s) 309, 338, 788
HpaII CCGG 1 cut(s) 638
HphI GGTGA 2 cut(s) 107, 1193
Hpy166II GTNNAC 2 cut(s) 633, 1114
Hpy188I TCNGA 6 cut(s) 136, 268, 335, 397, 688, 1075
Hpy188III TCNNGA 5 cut(s) 44, 638, 833, 1018, 1187
Hpy8I GTNNAC 2 cut(s) 633, 1114
HpyAV CCTTC 3 cut(s) 208, 596, 710
HpyCH4III ACNGT 4 cut(s) 95, 320, 414, 442
HpyCH4IV ACGT 2 cut(s) 231, 538
HpyF10VI GCNNNNNNNGC 4 cut(s) 491, 587, 666, 815
HpyF3I CTNAG 5 cut(s) 265, 345, 852, 1164, 1350
HpySE526I ACGT 2 cut(s) 231, 538
Hsp92II CATG 4 cut(s) 47, 590, 702, 975
HspAI GCGC 1 cut(s) 506
Kpn2I TCCGGA 1 cut(s) 637
Kzo9I GATC 5 cut(s) 19, 384, 991, 1052, 1183
LmnI GCTCC 6 cut(s) 76, 719, 814, 850, 1222, 1284
Lsp1109I GCAGC 2 cut(s) 535, 590
LweI GCATC 3 cut(s) 171, 690, 1066
MaeI CTAG 3 cut(s) 56, 324, 564
MaeII ACGT 2 cut(s) 231, 538
MaeIII GTNAC 4 cut(s) 539, 869, 922, 1209
MalI GATC 5 cut(s) 21, 386, 993, 1054, 1185
MboI GATC 5 cut(s) 19, 384, 991, 1052, 1183
MboII GAAGA 4 cut(s) 195, 240, 326, 877
MfeI CAATTG 1 cut(s) 282
MflI RGATCY 2 cut(s) 19, 1052
MhlI GDGCHC 2 cut(s) 635, 724
MlsI TGGCCA 1 cut(s) 258
MluI ACGCGT 1 cut(s) 483
MluNI TGGCCA 1 cut(s) 258
MlyI GAGTC 2 cut(s) 318, 332
MmeI TCCRAC 1 cut(s) 848
Mox20I TGGCCA 1 cut(s) 258
MroI TCCGGA 1 cut(s) 637
MroXI GAANNNNTTC 1 cut(s) 364
MscI TGGCCA 1 cut(s) 258
MseI TTAA 7 cut(s) 428, 488, 516, 732, 963, 1194, 1314
MslI CAYNNNNRTG 1 cut(s) 902
Msp20I TGGCCA 1 cut(s) 258
MspI CCGG 1 cut(s) 638
MunI CAATTG 1 cut(s) 282
Mva1269I GAATGC 2 cut(s) 104, 283
MvnI CGCG 3 cut(s) 485, 494, 506
MwoI GCNNNNNNNGC 4 cut(s) 491, 587, 666, 815
NcoI CCATGG 1 cut(s) 971
NdeII GATC 5 cut(s) 19, 384, 991, 1052, 1183
NlaIII CATG 4 cut(s) 47, 590, 702, 975
NlaIV GGNNCC 3 cut(s) 21, 453, 1280
NmeAIII GCCGAG 1 cut(s) 62
NmuCI GTSAC 2 cut(s) 539, 922
NspI RCATGY 1 cut(s) 590
PagI TCATGA 1 cut(s) 43
PaqCI CACCTGC 1 cut(s) 499
PctI GAATGC 2 cut(s) 104, 283
PdmI GAANNNNTTC 1 cut(s) 364
PfeI GAWTC 1 cut(s) 788
PflFI GACNNNGTC 1 cut(s) 455
PkrI GCNGC 2 cut(s) 550, 580
PleI GAGTC 2 cut(s) 317, 332
PpsI GAGTC 2 cut(s) 317, 332
Ppu21I YACGTR 1 cut(s) 539
PpuMI RGGWCCY 1 cut(s) 451
PsiI TTATAA 2 cut(s) 1049, 1373
Psp124BI GAGCTC 1 cut(s) 724
Psp5II RGGWCCY 1 cut(s) 451
PspN4I GGNNCC 3 cut(s) 21, 453, 1280
PspPI GGNCC 1 cut(s) 451
PspPPI RGGWCCY 1 cut(s) 451
PstI CTGCAG 1 cut(s) 784
PsuI RGATCY 2 cut(s) 19, 1052
PsyI GACNNNGTC 1 cut(s) 455
RsaI GTAC 5 cut(s) 322, 411, 416, 439, 1299
RsaNI GTAC 5 cut(s) 321, 410, 415, 438, 1298
RseI CAYNNNNRTG 1 cut(s) 902
SacI GAGCTC 1 cut(s) 724
SaqAI TTAA 7 cut(s) 428, 488, 516, 732, 963, 1194, 1314
SatI GCNGC 2 cut(s) 549, 579
Sau3AI GATC 5 cut(s) 19, 384, 991, 1052, 1183
Sau96I GGNCC 1 cut(s) 451
SchI GAGTC 2 cut(s) 318, 332
SduI GDGCHC 2 cut(s) 635, 724
SfaNI GCATC 3 cut(s) 171, 690, 1066
SfcI CTRYAG 1 cut(s) 780
SinI GGWCC 1 cut(s) 451
SmiMI CAYNNNNRTG 1 cut(s) 902
SsiI CCGC 3 cut(s) 467, 494, 1220
SspI AATATT 2 cut(s) 119, 432
SspMI CTAG 3 cut(s) 56, 324, 564
SstI GAGCTC 1 cut(s) 724
StyI CCWWGG 4 cut(s) 259, 304, 670, 971
TaaI ACNGT 4 cut(s) 95, 320, 414, 442
TaiI ACGT 2 cut(s) 234, 541
TaqI TCGA 2 cut(s) 312, 724
TatI WGTACW 1 cut(s) 320
TfiI GAWTC 1 cut(s) 788
Tru1I TTAA 7 cut(s) 428, 488, 516, 732, 963, 1194, 1314
Tru9I TTAA 7 cut(s) 428, 488, 516, 732, 963, 1194, 1314
TscAI CASTG 3 cut(s) 109, 635, 907
TseFI GTSAC 2 cut(s) 539, 922
TseI GCWGC 2 cut(s) 548, 578
Tsp45I GTSAC 2 cut(s) 539, 922
TspDTI ATGAA 8 cut(s) 17, 32, 60, 615, 1014, 1215, 1305, 1354
TspGWI ACGGA 2 cut(s) 452, 1076
TspRI CASTG 3 cut(s) 109, 635, 907
Tth111I GACNNNGTC 1 cut(s) 455
VneI GTGCAC 1 cut(s) 631
VpaK11BI GGWCC 1 cut(s) 451
XagI CCTNNNNNAGG 1 cut(s) 855
XapI RAATTY 7 cut(s) 532, 559, 572, 726, 1021, 1190, 1360
XceI RCATGY 1 cut(s) 590
XcmI CCANNNNNNNNNTGG 1 cut(s) 230
XmnI GAANNNNTTC 1 cut(s) 364
XspI CTAG 3 cut(s) 56, 324, 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.