RLG00000010335

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
777063 .. 782723
5661 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010335

Sequence Viewer

Length: 2175 bp
ATGAAATTTTGGTTCTTCATTTCTCTCCTCTTCAATTTGTTACTGAGCATCAGCAGCACAGTAACTCACACTGAAGACCATCCCCCTTTTCTGCACAGCTGTTTCAGCAACAGGGGTAACTACACTGCTAATAGCATCTACCGCGCCAACCTCAATCAGATTCTCTCAGATCTCCCCTCCACTGACAATGGTTATGGGTTCTACAACACCTCAGCAGGACAAAACCCTGACAAAGCCCACGCAATTGGGCTCTGTAGAGGCGATCTTAAGCCCGATCCCTGCAGAAGCTGCCTGGATGGGGTTAGAAATCTTCTCATAGAGGCGTGTCCTTCTGAGAAAGAGGCGATTGGGTGGTACGAGAACTGCATGCTTCGCTTCTCAAACCGCTCCCTTCAGGGCTCCACGGAAGTCGTTCCTGCCTTCTCTCTGTGGAAGGCAGAGAGCCTATTGTCCGGTGATGACGTGGCTGCCGGGTTCAACCGGAAGCTCAAGAACTTACTGAAAACCCTAAGGACTGAGGCCGCAGGGGGCGGCAATCTTAGAAAGTTTGCAGCAGGAAGTGCCAGCGTTAGGGTTGCTCGGAATTCCAGTCAATTGACGATATATGCGCTTGTCCAATGCACACCCGATTTGTCGGAGACAGACTGCAAAAGGTGCTTGCTTGAGGCCTTTGGGTATATACCAAGATGCTGTGATGGGAAGGATACGGGGAGGCTTGTTATACCTAGCTGTAATTTGAGGTTTGAGCTGTCTCTCTTCTTTGACAAAGTTGCTACTGTGCTGCCTTTGCCTGTCTCTCATAGCTCTCCTCCTCCAATCTCTGCCAATACCACACGTATTTCGCAAGGAATGAAAAACGAAAAACTTTGGAATGTGATGATTCTCGGTATGGCAATCGTTGCTGGTGTTTTGTCGCTATTCATGTGCTATTGTTGGAGAGTACTCAGAGTAGATAGGAAAGAGAGAGTACAACCAAGTGAAGCAGTTGTAATTCGAAGTTCTTCGGTAGTTGAATCACCTAAAACGGCGTCCTCGGTATATGTCACTCAGATTAGTTATGACGATGTCAAATTGGCTACGGGTGGCTTTGCTGATAAACGGGGACAAGGCGGCTTTGGTCCTGTTTTCAAGGGTCGTTTGAACGGCCAAGATATAGCCGTGAAAATACTCTCGACGGAATACGGACAAGGAGATGTACACTTTTCAACTGAAGTCGCAGTTTTAGGCAACCTTCGACATGGCAATTTAGTCAAGCTCCTGCATTTCAGTGTGGAAGGAGATGAAAGGGTTCTTGTATATGAGTTTGTCCCAAATCAAAGTCTTGATCGCTTCATATTTGATCAAAACGAGGGCGAAGGTTTGGATTGGGATAGACGCTACATCATCATAGTTGGCACTGCACGAGGACTCTGTTACCTTCATCATAATGCTTCTCCTAAATTTATTCATCGTGATGTAAAAACCAGCAACATATTACTAGATGCAGAATGGAATCCCAAAATTTCTGATCTGGGCCTGGCAAAGTTGTTTTCTGAAGATCAAATGGAACAATATACTAAGAACCGTGCTGGAACGTGCGGATATATGGCTCCAGAGTATTTTAGTGTAGGTCGTTACTCTGTTAAGTCAGATGTCTACAGCTTTGGTGTAGTGATGTTGGAGATTTTACGAGGAGAGAAAAGTAGTTCTTTCCGTTATGGAGAAAATGGAGCAAGTCTTGTAAACTATGCTTGGGAAAATTGGGGGAATGAAGAGAGGGTATCAAATTTAATAGATCCGATGTTGAGGACTACTGTTTCAGACAGTGAAATAAAGAGATGCCTCAAAATTGCATTACTTTGCCTGCAAGAAAATGAAGATAAGAGGCCAACCATGGTTGAAGTTGTTGACATGCTTACAAGTAACCGTGGTACTGATACTCTGCCAGACCCGGTACGCCGAGAACAAGAACCAGTCCTTCCAGTTCTACAACCCCAACAACAAGCACTAGTGGAAAATAATGCTTATCAAATCCTAGGAATGCTAGTCAGTGCTTCTTCCTCAATCGCTTCCAAGGTGTCTGAATTCTGTAGGACTCGTGCTTACAGTCCTCCCAAGAATCGCCCTAAGAGACCAGGAGAAGTGGAGATTTTCGAGCAGCCAGTTGGTTCCCTCTCCCCAGGCAGCAATGGGTGA

Protein Analysis

725

Amino Acids

80.41

Weight (kDa)

7.45

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 34 - 129 2.9e-24 Salt stress response/antifungal
Stress-antifung PF01657 158 - 249 2.7e-11 Salt stress response/antifungal
PK_Tyr_Ser-Thr PF07714 367 - 632 6.4e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 368 - 630 1.7e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 387
AccI GTMKAC 1 cut(s) 1635
AccII CGCG 1 cut(s) 144
AciI CCGC 6 cut(s) 142, 385, 522, 531, 1110, 1578
AclWI GGATC 2 cut(s) 269, 1769
AcoI YGGCCR 1 cut(s) 1144
AcsI RAATTY 6 cut(s) 5, 583, 1439, 1500, 1765, 2063
AcuI CTGAAG 4 cut(s) 93, 377, 1230, 1554
AcyI GRCGYC 1 cut(s) 1028
AfaI GTAC 6 cut(s) 356, 942, 969, 1197, 1912, 1935
AfiI CCNNNNNNNGG 2 cut(s) 298, 570
AflII CTTAAG 1 cut(s) 266
AflIII ACRYGT 1 cut(s) 833
AgsI TTSAA 7 cut(s) 34, 478, 1013, 1129, 1141, 1206, 1880
AhlI ACTAGT 1 cut(s) 1987
AjiI CACGTC 1 cut(s) 463
AjnI CCWGG 4 cut(s) 291, 1515, 2113, 2158
AluBI AGCT 8 cut(s) 99, 288, 487, 729, 748, 804, 1255, 1641
AluI AGCT 8 cut(s) 99, 288, 487, 729, 748, 804, 1255, 1641
Alw26I GTCTC 4 cut(s) 632, 756, 799, 2104
AlwI GGATC 2 cut(s) 269, 1769
AlwNI CAGNNNCTG 1 cut(s) 288
AoxI GGCC 5 cut(s) 519, 666, 1144, 1513, 1865
ApeKI GCWGC 7 cut(s) 54, 288, 467, 551, 781, 2137, 2163
ApoI RAATTY 6 cut(s) 5, 583, 1439, 1500, 1765, 2063
Asp700I GAANNNNTTC 3 cut(s) 411, 1000, 1287
AspA2I CCTAGG 1 cut(s) 2014
AspLEI GCGC 2 cut(s) 146, 610
AspS9I GGNCC 2 cut(s) 1118, 1513
AsuC2I CCSGG 2 cut(s) 472, 1931
AsuHPI GGTGA 2 cut(s) 467, 1008
AsuII TTCGAA 1 cut(s) 994
AvaII GGWCC 1 cut(s) 1118
AvrII CCTAGG 1 cut(s) 2014
AxyI CCTNAGG 1 cut(s) 509
BanII GRGCYC 2 cut(s) 252, 401
BauI CACGAG 2 cut(s) 1401, 2076
BbsI GAAGAC 1 cut(s) 81
BbvCI CCTCAGC 1 cut(s) 211
BbvI GCAGC 6 cut(s) 66, 275, 454, 563, 768, 2149
BccI CCATC 3 cut(s) 87, 290, 689
BceAI ACGGC 3 cut(s) 1041, 1142, 1159
BciT130I CCWGG 4 cut(s) 293, 1517, 2115, 2160
BciVI GTATCC 1 cut(s) 697
BclI TGATCA 1 cut(s) 1339
BcnI CCSGG 2 cut(s) 472, 1931
BcoDI GTCTC 4 cut(s) 632, 756, 799, 2104
BcuI ACTAGT 1 cut(s) 1987
BfaI CTAG 5 cut(s) 726, 1478, 1988, 2015, 2024
BfmI CTRYAG 4 cut(s) 253, 280, 1636, 2068
BfrI CTTAAG 1 cut(s) 266
BfuI GTATCC 1 cut(s) 697
BglII AGATCT 1 cut(s) 169
BlnI CCTAGG 1 cut(s) 2014
BmcAI AGTACT 1 cut(s) 942
Bme1390I CCNGG 6 cut(s) 293, 472, 1517, 1931, 2115, 2160
Bme18I GGWCC 1 cut(s) 1118
BmgBI CACGTC 1 cut(s) 463
BmgT120I GGNCC 2 cut(s) 1118, 1513
BmiI GGNNCC 3 cut(s) 400, 1590, 2149
BmrFI CCNGG 6 cut(s) 293, 472, 1517, 1931, 2115, 2160
BmsI GCATC 5 cut(s) 57, 144, 677, 1471, 1808
BpiI GAAGAC 1 cut(s) 81
BpmI CTGGAG 1 cut(s) 1575
Bpu10I CCTNAGC 1 cut(s) 211
Bpu14I TTCGAA 1 cut(s) 994
BpuEI CTTGAG 2 cut(s) 473, 683
BpuMI CCSGG 2 cut(s) 472, 1931
BsaAI YACGTR 1 cut(s) 836
BsaHI GRCGYC 1 cut(s) 1028
BsaI GGTCTC 1 cut(s) 2104
BsaJI CCNNGG 7 cut(s) 402, 1032, 1872, 1906, 2014, 2052, 2158
BsaWI WCCGGW 2 cut(s) 452, 480
Bsc4I CCNNNNNNNGG 2 cut(s) 298, 570
Bse1I ACTGG 4 cut(s) 588, 1952, 1961, 2141
Bse21I CCTNAGG 1 cut(s) 509
Bse3DI GCAATG 1 cut(s) 2173
BseBI CCWGG 4 cut(s) 293, 1517, 2115, 2160
BseDI CCNNGG 7 cut(s) 402, 1032, 1872, 1906, 2014, 2052, 2158
BseGI GGATG 2 cut(s) 79, 301
BseLI CCNNNNNNNGG 2 cut(s) 298, 570
BseMI GCAATG 1 cut(s) 2173
BseMII CTCAG 7 cut(s) 35, 180, 225, 324, 507, 958, 1061
BseNI ACTGG 4 cut(s) 588, 1952, 1961, 2141
BseRI GAGGAG 4 cut(s) 17, 798, 801, 1686
BseXI GCAGC 6 cut(s) 66, 275, 454, 563, 768, 2149
BsgI GTGCAG 2 cut(s) 77, 1383
Bsh1236I CGCG 1 cut(s) 144
BshFI GGCC 5 cut(s) 521, 668, 1146, 1515, 1867
BsiSI CCGG 4 cut(s) 453, 471, 481, 1931
BslFI GGGAC 2 cut(s) 1116, 1292
BslI CCNNNNNNNGG 2 cut(s) 298, 570
BsmAI GTCTC 4 cut(s) 632, 756, 799, 2104
BsmFI GGGAC 2 cut(s) 1116, 1292
BsmI GAATGC 1 cut(s) 2025
BsnI GGCC 5 cut(s) 521, 668, 1146, 1515, 1867
Bso31I GGTCTC 1 cut(s) 2104
Bsp119I TTCGAA 1 cut(s) 994
Bsp1286I GDGCHC 2 cut(s) 252, 401
Bsp1407I TGTACA 1 cut(s) 1195
Bsp143I GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
Bsp19I CCATGG 1 cut(s) 1872
BspACI CCGC 6 cut(s) 142, 385, 522, 531, 1110, 1578
BspANI GGCC 5 cut(s) 521, 668, 1146, 1515, 1867
BspCNI CTCAG 7 cut(s) 36, 179, 224, 325, 508, 957, 1060
BspFNI CGCG 1 cut(s) 144
BspLI GGNNCC 3 cut(s) 400, 1590, 2149
BspMAI CTGCAG 1 cut(s) 284
BspPI GGATC 2 cut(s) 269, 1769
BspT104I TTCGAA 1 cut(s) 994
BspTI CTTAAG 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 2104
BsrBI CCGCTC 1 cut(s) 387
BsrDI GCAATG 1 cut(s) 2173
BsrGI TGTACA 1 cut(s) 1195
BsrI ACTGG 4 cut(s) 588, 1952, 1961, 2141
BssECI CCNNGG 7 cut(s) 402, 1032, 1872, 1906, 2014, 2052, 2158
BssMI GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
BssNI GRCGYC 1 cut(s) 1028
BssSI CACGAG 2 cut(s) 1401, 2076
BssT1I CCWWGG 3 cut(s) 1872, 2014, 2052
Bst2BI CACGAG 2 cut(s) 1401, 2076
Bst2UI CCWGG 4 cut(s) 293, 1517, 2115, 2160
Bst4CI ACNGT 7 cut(s) 61, 778, 1565, 1795, 1805, 1907, 2087
Bst6I CTCTTC 3 cut(s) 35, 761, 1746
BstACI GRCGYC 1 cut(s) 1028
BstAFI CTTAAG 1 cut(s) 266
BstAPI GCANNNNNTGC 4 cut(s) 288, 560, 654, 899
BstAUI TGTACA 1 cut(s) 1195
BstBAI YACGTR 1 cut(s) 836
BstBI TTCGAA 1 cut(s) 994
BstC8I GCNNGC 4 cut(s) 368, 565, 659, 1844
BstDSI CCRYGG 3 cut(s) 402, 1872, 1906
BstF5I GGATG 2 cut(s) 79, 301
BstFNI CGCG 1 cut(s) 144
BstHHI GCGC 2 cut(s) 146, 610
BstKTI GATC 8 cut(s) 172, 265, 277, 1327, 1342, 1510, 1540, 1777
BstMAI GTCTC 4 cut(s) 632, 756, 799, 2104
BstMBI GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
BstMWI GCNNNNNNNGC 9 cut(s) 54, 105, 141, 288, 372, 560, 654, 787, 899
BstNI CCWGG 4 cut(s) 293, 1517, 2115, 2160
BstNSI RCATGY 2 cut(s) 370, 1894
BstSCI CCNGG 6 cut(s) 291, 470, 1515, 1929, 2113, 2158
BstSFI CTRYAG 4 cut(s) 253, 280, 1636, 2068
BstUI CGCG 1 cut(s) 144
BstV1I GCAGC 6 cut(s) 66, 275, 454, 563, 768, 2149
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 2 cut(s) 169, 1774
BstXI CCANNNNNNTGG 1 cut(s) 245
BstYI RGATCY 2 cut(s) 169, 1774
Bsu36I CCTNAGG 1 cut(s) 509
BsuI GTATCC 1 cut(s) 697
BsuRI GGCC 5 cut(s) 521, 668, 1146, 1515, 1867
BtgI CCRYGG 3 cut(s) 402, 1872, 1906
BtrI CACGTC 1 cut(s) 463
BtsCI GGATG 2 cut(s) 79, 301
BtsI GCAGTG 2 cut(s) 123, 1395
BtsIMutI CAGTG 7 cut(s) 69, 123, 180, 1273, 1395, 1810, 2035
Cac8I GCNNGC 4 cut(s) 368, 565, 659, 1844
CaiI CAGNNNCTG 1 cut(s) 288
CfoI GCGC 2 cut(s) 146, 610
Cfr13I GGNCC 2 cut(s) 1118, 1513
CseI GACGC 2 cut(s) 1017, 1383
Csp6I GTAC 6 cut(s) 355, 941, 968, 1196, 1911, 1934
CviAII CATG 5 cut(s) 367, 922, 1238, 1873, 1891
CviQI GTAC 6 cut(s) 355, 941, 968, 1196, 1911, 1934
DpnI GATC 8 cut(s) 171, 264, 276, 1326, 1341, 1509, 1539, 1776
DpnII GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
EaeI YGGCCR 1 cut(s) 1144
Eam1104I CTCTTC 3 cut(s) 35, 761, 1746
EarI CTCTTC 3 cut(s) 35, 761, 1746
Eco130I CCWWGG 3 cut(s) 1872, 2014, 2052
Eco147I AGGCCT 1 cut(s) 668
Eco24I GRGCYC 2 cut(s) 252, 401
Eco31I GGTCTC 1 cut(s) 2104
Eco47I GGWCC 1 cut(s) 1118
Eco57I CTGAAG 4 cut(s) 93, 377, 1230, 1554
Eco81I CCTNAGG 1 cut(s) 509
EcoRI GAATTC 2 cut(s) 583, 2063
EcoRII CCWGG 4 cut(s) 291, 1515, 2113, 2158
EcoT14I CCWWGG 3 cut(s) 1872, 2014, 2052
EcoT38I GRGCYC 2 cut(s) 252, 401
ErhI CCWWGG 3 cut(s) 1872, 2014, 2052
FaeI CATG 5 cut(s) 370, 925, 1241, 1876, 1894
FalI AAGNNNNNCTT 2 cut(s) 1672, 1704
FaqI GGGAC 2 cut(s) 1116, 1292
FatI CATG 5 cut(s) 366, 921, 1237, 1872, 1890
FbaI TGATCA 1 cut(s) 1339
FblI GTMKAC 1 cut(s) 1635
FokI GGATG 2 cut(s) 66, 308
FriOI GRGCYC 2 cut(s) 252, 401
FspBI CTAG 5 cut(s) 726, 1478, 1988, 2015, 2024
GlaI GCGC 2 cut(s) 145, 609
GsuI CTGGAG 1 cut(s) 1575
HaeIII GGCC 5 cut(s) 521, 668, 1146, 1515, 1867
HapII CCGG 4 cut(s) 453, 471, 481, 1931
HgaI GACGC 2 cut(s) 1017, 1383
HhaI GCGC 2 cut(s) 146, 610
Hin1I GRCGYC 1 cut(s) 1028
Hin1II CATG 5 cut(s) 370, 925, 1241, 1876, 1894
Hin6I GCGC 2 cut(s) 144, 608
HinP1I GCGC 2 cut(s) 144, 608
HincII GTYRAC 1 cut(s) 1888
HindII GTYRAC 1 cut(s) 1888
HinfI GANTC 7 cut(s) 160, 880, 1013, 1407, 1492, 2074, 2098
HpaII CCGG 4 cut(s) 453, 471, 481, 1931
HphI GGTGA 2 cut(s) 467, 1008
Hpy166II GTNNAC 4 cut(s) 1198, 1636, 1723, 1888
Hpy188III TCNNGA 5 cut(s) 490, 1171, 1322, 1451, 1592
Hpy8I GTNNAC 4 cut(s) 1198, 1636, 1723, 1888
Hpy99I CGWCG 1 cut(s) 1177
HpyCH4III ACNGT 7 cut(s) 61, 778, 1565, 1795, 1805, 1907, 2087
HpyCH4IV ACGT 3 cut(s) 462, 835, 1574
HpyF10VI GCNNNNNNNGC 9 cut(s) 54, 105, 141, 288, 372, 560, 654, 787, 899
HpySE526I ACGT 3 cut(s) 462, 835, 1574
Hsp92I GRCGYC 1 cut(s) 1028
Hsp92II CATG 5 cut(s) 370, 925, 1241, 1876, 1894
HspAI GCGC 2 cut(s) 144, 608
Ksp22I TGATCA 1 cut(s) 1339
Kzo9I GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
LmnI GCTCC 5 cut(s) 392, 404, 1260, 1594, 1709
Lsp1109I GCAGC 6 cut(s) 66, 275, 454, 563, 768, 2149
LweI GCATC 5 cut(s) 57, 144, 677, 1471, 1808
MaeI CTAG 5 cut(s) 726, 1478, 1988, 2015, 2024
MaeII ACGT 3 cut(s) 462, 835, 1574
MaeIII GTNAC 7 cut(s) 39, 61, 116, 1042, 1412, 1613, 1901
MalI GATC 8 cut(s) 171, 264, 276, 1326, 1341, 1509, 1539, 1776
MbiI CCGCTC 1 cut(s) 387
MboI GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
MfeI CAATTG 2 cut(s) 243, 593
MflI RGATCY 2 cut(s) 169, 1774
MhlI GDGCHC 2 cut(s) 252, 401
MlyI GAGTC 2 cut(s) 1401, 2068
MmeI TCCRAC 3 cut(s) 615, 914, 1638
MroXI GAANNNNTTC 3 cut(s) 411, 1000, 1287
MseI TTAA 3 cut(s) 267, 1623, 1769
MslI CAYNNNNRTG 3 cut(s) 1266, 1425, 1452
MspA1I CMGCKG 1 cut(s) 99
MspCI CTTAAG 1 cut(s) 266
MspI CCGG 4 cut(s) 453, 471, 481, 1931
MspR9I CCNGG 6 cut(s) 293, 472, 1517, 1931, 2115, 2160
MunI CAATTG 2 cut(s) 243, 593
Mva1269I GAATGC 1 cut(s) 2025
MvaI CCWGG 4 cut(s) 293, 1517, 2115, 2160
MvnI CGCG 1 cut(s) 144
MwoI GCNNNNNNNGC 9 cut(s) 54, 105, 141, 288, 372, 560, 654, 787, 899
NciI CCSGG 2 cut(s) 472, 1931
NcoI CCATGG 1 cut(s) 1872
NdeII GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
NlaIII CATG 5 cut(s) 370, 925, 1241, 1876, 1894
NlaIV GGNNCC 3 cut(s) 400, 1590, 2149
NmeAIII GCCGAG 1 cut(s) 1964
NmuCI GTSAC 1 cut(s) 1042
NspI RCATGY 2 cut(s) 370, 1894
NspV TTCGAA 1 cut(s) 994
PaeI GCATGC 1 cut(s) 370
PceI AGGCCT 1 cut(s) 668
PctI GAATGC 1 cut(s) 2025
PdmI GAANNNNTTC 3 cut(s) 411, 1000, 1287
PfeI GAWTC 5 cut(s) 160, 880, 1013, 1492, 2098
PflFI GACNNNGTC 1 cut(s) 1064
PleI GAGTC 2 cut(s) 1401, 2068
PpsI GAGTC 2 cut(s) 1401, 2068
Ppu21I YACGTR 1 cut(s) 836
Psp6I CCWGG 4 cut(s) 291, 1515, 2113, 2158
PspGI CCWGG 4 cut(s) 291, 1515, 2113, 2158
PspN4I GGNNCC 3 cut(s) 400, 1590, 2149
PspPI GGNCC 2 cut(s) 1118, 1513
PstI CTGCAG 1 cut(s) 284
PstNI CAGNNNCTG 1 cut(s) 288
PsuI RGATCY 2 cut(s) 169, 1774
PsyI GACNNNGTC 1 cut(s) 1064
PvuII CAGCTG 1 cut(s) 99
RsaI GTAC 6 cut(s) 356, 942, 969, 1197, 1912, 1935
RsaNI GTAC 6 cut(s) 355, 941, 968, 1196, 1911, 1934
RseI CAYNNNNRTG 3 cut(s) 1266, 1425, 1452
SaqAI TTAA 3 cut(s) 267, 1623, 1769
Sau3AI GATC 8 cut(s) 169, 262, 274, 1324, 1339, 1507, 1537, 1774
Sau96I GGNCC 2 cut(s) 1118, 1513
ScaI AGTACT 1 cut(s) 942
SchI GAGTC 2 cut(s) 1401, 2068
ScrFI CCNGG 6 cut(s) 293, 472, 1517, 1931, 2115, 2160
SduI GDGCHC 2 cut(s) 252, 401
SfaNI GCATC 5 cut(s) 57, 144, 677, 1471, 1808
SfcI CTRYAG 4 cut(s) 253, 280, 1636, 2068
SfuI TTCGAA 1 cut(s) 994
SinI GGWCC 1 cut(s) 1118
SmiMI CAYNNNNRTG 3 cut(s) 1266, 1425, 1452
SmlI CTYRAG 3 cut(s) 266, 488, 662
SmoI CTYRAG 3 cut(s) 266, 488, 662
SpeI ACTAGT 1 cut(s) 1987
SphI GCATGC 1 cut(s) 370
SseBI AGGCCT 1 cut(s) 668
SsiI CCGC 6 cut(s) 142, 385, 522, 531, 1110, 1578
SspMI CTAG 5 cut(s) 726, 1478, 1988, 2015, 2024
StuI AGGCCT 1 cut(s) 668
StyD4I CCNGG 6 cut(s) 291, 470, 1515, 1929, 2113, 2158
StyI CCWWGG 3 cut(s) 1872, 2014, 2052
TaaI ACNGT 7 cut(s) 61, 778, 1565, 1795, 1805, 1907, 2087
TaiI ACGT 3 cut(s) 465, 838, 1577
TaqI TCGA 4 cut(s) 994, 1172, 1234, 2133
TatI WGTACW 3 cut(s) 940, 967, 1195
TauI GCSGC 3 cut(s) 524, 534, 1113
TfiI GAWTC 5 cut(s) 160, 880, 1013, 1492, 2098
Tru1I TTAA 3 cut(s) 267, 1623, 1769
Tru9I TTAA 3 cut(s) 267, 1623, 1769
TscAI CASTG 7 cut(s) 76, 130, 187, 1273, 1402, 1810, 2035
TseFI GTSAC 1 cut(s) 1042
TseI GCWGC 7 cut(s) 54, 288, 467, 551, 781, 2137, 2163
Tsp45I GTSAC 1 cut(s) 1042
TspGWI ACGGA 4 cut(s) 419, 1190, 1197, 1682
TspRI CASTG 7 cut(s) 76, 130, 187, 1273, 1402, 1810, 2035
Tth111I GACNNNGTC 1 cut(s) 1064
Vha464I CTTAAG 1 cut(s) 266
VpaK11BI GGWCC 1 cut(s) 1118
XapI RAATTY 6 cut(s) 5, 583, 1439, 1500, 1765, 2063
XceI RCATGY 2 cut(s) 370, 1894
XmaJI CCTAGG 1 cut(s) 2014
XmiI GTMKAC 1 cut(s) 1635
XmnI GAANNNNTTC 3 cut(s) 411, 1000, 1287
XspI CTAG 5 cut(s) 726, 1478, 1988, 2015, 2024
ZrmI AGTACT 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.