MD08G1140000.v1.1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
13664199 .. 13665020
822 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1140000.v1.1.491

Sequence Viewer

Length: 822 bp
ATGGTTTCATCGAGATTAATCAGATTATTCTTCCTTTGTACACAAATTTTGTTACTCATCATCAACGTTAATTTCACTCAAGCCCTGCTTGGACCTCGTGATGTTCCAATATTCCACTGTTCTAACAACAAAGGTAACTACACCACTGGCAGCACCTATCAAACAAACCTCAATGGCCTCCTCTTTGACTTACACTCTTACAACAACGGCTATGGCTTTTTCAATTCCTCCCGTGGCGAAAACATTGACAGAGTTTATGCAATCGTGCTCTGTCGAGGACTAATTAAAGAGGACATTTGCAGTAAGTGCCTTACTGACGCTGCAAACTATCTAAGGGAACATTGTACTAATCAGGAGGCAACTGGATGGCAGAACGATTGTATGTTACGCTACTCAAACCGCTCCCTATACGGCATGATGGAAACTAATCCAGATTTATACCTGAAAGATGTTGAAACTTTATCTGTATCGACAGGCTTGGATGCGTTCAGTCAGGAGAGCTCTCACTTACTGAATCGACTAGGACAAAAAGCAGCAACGGGTGGTGATCTTCGTAAATTTGCAACAGGAAACGCAAGCCTTCCAAGTTCTGATATAACAATCTATGGACTTGTTCAGTGCACCCCAGAATTATCCGAGCAGAGTTGTATTGATTGCTTAAATTATACTTTCGGAATGTTTGGATCATGTTGTAGCGTATCAGTTGGTGTGAGAATTGTGAAACCAAGCTGTGGCTCAAGGTATGAAATTTACCCCTTTCTTAACGATACAACTGAGACACCACCGGCCAATACTGCGAGTCCAGGAGGTATTACATCTTGA

Protein Analysis

274

Amino Acids

30.08

Weight (kDa)

5.57

Isoelectric Point (pI)

35.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 40 - 134 1.4e-21 Salt stress response/antifungal
Stress-antifung PF01657 161 - 250 3.5e-09 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 731
AccBSI CCGCTC 1 cut(s) 402
AciI CCGC 1 cut(s) 400
AclI AACGTT 1 cut(s) 66
AclWI GGATC 1 cut(s) 691
AcoI YGGCCR 1 cut(s) 786
AcsI RAATTY 3 cut(s) 45, 557, 747
AfaI GTAC 2 cut(s) 40, 346
AfiI CCNNNNNNNGG 1 cut(s) 731
AgsI TTSAA 2 cut(s) 223, 455
AjnI CCWGG 1 cut(s) 802
AluBI AGCT 2 cut(s) 501, 729
AluI AGCT 2 cut(s) 501, 729
Alw21I GWGCWC 3 cut(s) 270, 503, 623
Alw26I GTCTC 1 cut(s) 770
Alw44I GTGCAC 1 cut(s) 619
AlwI GGATC 1 cut(s) 691
AoxI GGCC 2 cut(s) 175, 786
ApaLI GTGCAC 1 cut(s) 619
ApeKI GCWGC 3 cut(s) 150, 320, 533
ApoI RAATTY 3 cut(s) 45, 557, 747
AseI ATTAAT 1 cut(s) 17
AspS9I GGNCC 1 cut(s) 92
AsuHPI GGTGA 1 cut(s) 557
AvaII GGWCC 1 cut(s) 92
BaeGI GKGCMC 1 cut(s) 623
BanII GRGCYC 1 cut(s) 503
BauI CACGAG 1 cut(s) 96
Bbv12I GWGCWC 3 cut(s) 270, 503, 623
BbvI GCAGC 3 cut(s) 162, 307, 545
BccI CCATC 2 cut(s) 360, 412
BceAI ACGGC 2 cut(s) 223, 427
BciT130I CCWGG 1 cut(s) 804
BcoDI GTCTC 1 cut(s) 770
BfaI CTAG 1 cut(s) 521
BisI GCNGC 3 cut(s) 151, 321, 534
BlsI GCNGC 3 cut(s) 152, 322, 535
Bme1390I CCNGG 1 cut(s) 804
Bme18I GGWCC 1 cut(s) 92
BmgT120I GGNCC 1 cut(s) 92
BmrFI CCNGG 1 cut(s) 804
BmsI GCATC 1 cut(s) 472
BpuEI CTTGAG 2 cut(s) 63, 721
BsaJI CCNNGG 1 cut(s) 232
Bsc4I CCNNNNNNNGG 1 cut(s) 731
Bse118I RCCGGY 1 cut(s) 784
Bse1I ACTGG 2 cut(s) 151, 367
BseBI CCWGG 1 cut(s) 804
BseDI CCNNGG 1 cut(s) 232
BseGI GGATG 2 cut(s) 371, 487
BseLI CCNNNNNNNGG 1 cut(s) 731
BseMII CTCAG 1 cut(s) 765
BseNI ACTGG 2 cut(s) 151, 367
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 3 cut(s) 162, 307, 545
BshFI GGCC 2 cut(s) 177, 788
BsiHKAI GWGCWC 3 cut(s) 270, 503, 623
BsiSI CCGG 1 cut(s) 785
BslI CCNNNNNNNGG 1 cut(s) 731
BsmAI GTCTC 1 cut(s) 770
BsnI GGCC 2 cut(s) 177, 788
Bsp1286I GDGCHC 3 cut(s) 270, 503, 623
Bsp1407I TGTACA 1 cut(s) 38
Bsp143I GATC 2 cut(s) 547, 683
BspACI CCGC 1 cut(s) 400
BspANI GGCC 2 cut(s) 177, 788
BspCNI CTCAG 1 cut(s) 766
BspPI GGATC 1 cut(s) 691
BsrBI CCGCTC 1 cut(s) 402
BsrFI RCCGGY 1 cut(s) 784
BsrGI TGTACA 1 cut(s) 38
BsrI ACTGG 2 cut(s) 151, 367
BssAI RCCGGY 1 cut(s) 784
BssECI CCNNGG 1 cut(s) 232
BssMI GATC 2 cut(s) 547, 683
BssSI CACGAG 1 cut(s) 96
Bst2BI CACGAG 1 cut(s) 96
Bst2UI CCWGG 1 cut(s) 804
Bst4CI ACNGT 1 cut(s) 119
BstAPI GCANNNNNTGC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 577
BstDEI CTNAG 2 cut(s) 332, 774
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 2 cut(s) 371, 487
BstKTI GATC 2 cut(s) 550, 686
BstMAI GTCTC 1 cut(s) 770
BstMBI GATC 2 cut(s) 547, 683
BstMWI GCNNNNNNNGC 2 cut(s) 306, 794
BstNI CCWGG 1 cut(s) 804
BstSCI CCNGG 1 cut(s) 802
BstSLI GKGCMC 1 cut(s) 623
BstV1I GCAGC 3 cut(s) 162, 307, 545
BsuRI GGCC 2 cut(s) 177, 788
BtgI CCRYGG 1 cut(s) 232
BtsCI GGATG 2 cut(s) 371, 487
BtsIMutI CAGTG 3 cut(s) 115, 144, 623
Cac8I GCNNGC 1 cut(s) 577
Cfr10I RCCGGY 1 cut(s) 784
Cfr13I GGNCC 1 cut(s) 92
CseI GACGC 1 cut(s) 326
Csp6I GTAC 2 cut(s) 39, 345
CviAII CATG 2 cut(s) 415, 687
CviQI GTAC 2 cut(s) 39, 345
DdeI CTNAG 2 cut(s) 332, 774
DpnI GATC 2 cut(s) 549, 685
DpnII GATC 2 cut(s) 547, 683
EaeI YGGCCR 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 501
Eco24I GRGCYC 1 cut(s) 503
Eco47I GGWCC 1 cut(s) 92
Eco53kI GAGCTC 1 cut(s) 501
EcoICRI GAGCTC 1 cut(s) 501
EcoRII CCWGG 1 cut(s) 802
EcoT38I GRGCYC 1 cut(s) 503
FaeI CATG 2 cut(s) 418, 690
FalI AAGNNNNNCTT 2 cut(s) 72, 104
FatI CATG 2 cut(s) 414, 686
Fnu4HI GCNGC 3 cut(s) 151, 321, 534
FokI GGATG 2 cut(s) 378, 494
FriOI GRGCYC 1 cut(s) 503
Fsp4HI GCNGC 3 cut(s) 151, 321, 534
FspBI CTAG 1 cut(s) 521
GluI GCNGC 3 cut(s) 151, 321, 534
HaeIII GGCC 2 cut(s) 177, 788
HapII CCGG 1 cut(s) 785
HgaI GACGC 1 cut(s) 326
Hin1II CATG 2 cut(s) 418, 690
HinfI GANTC 2 cut(s) 514, 799
HpaII CCGG 1 cut(s) 785
HphI GGTGA 1 cut(s) 557
Hpy166II GTNNAC 2 cut(s) 41, 621
Hpy188I TCNGA 4 cut(s) 23, 592, 637, 674
Hpy188III TCNNGA 6 cut(s) 12, 98, 353, 431, 494, 819
Hpy8I GTNNAC 2 cut(s) 41, 621
HpyAV CCTTC 1 cut(s) 590
HpyCH4III ACNGT 1 cut(s) 119
HpyCH4IV ACGT 1 cut(s) 66
HpyCH4V TGCA 5 cut(s) 260, 300, 323, 563, 621
HpyF10VI GCNNNNNNNGC 2 cut(s) 306, 794
HpyF3I CTNAG 2 cut(s) 332, 774
HpySE526I ACGT 1 cut(s) 66
Hsp92II CATG 2 cut(s) 418, 690
Kzo9I GATC 2 cut(s) 547, 683
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 3 cut(s) 162, 307, 545
LweI GCATC 1 cut(s) 472
MaeI CTAG 1 cut(s) 521
MaeII ACGT 1 cut(s) 66
MaeIII GTNAC 3 cut(s) 51, 134, 384
MalI GATC 2 cut(s) 549, 685
MbiI CCGCTC 1 cut(s) 402
MboI GATC 2 cut(s) 547, 683
MboII GAAGA 2 cut(s) 22, 542
MhlI GDGCHC 3 cut(s) 270, 503, 623
MluCI AATT 9 cut(s) 45, 70, 223, 282, 557, 629, 661, 714, 747
MlyI GAGTC 1 cut(s) 808
MnlI CCTC 9 cut(s) 105, 179, 188, 191, 238, 269, 283, 349, 800
MseI TTAA 5 cut(s) 17, 69, 285, 659, 762
MspI CCGG 1 cut(s) 785
MspR9I CCNGG 1 cut(s) 804
MvaI CCWGG 1 cut(s) 804
MwoI GCNNNNNNNGC 2 cut(s) 306, 794
NdeII GATC 2 cut(s) 547, 683
NlaIII CATG 2 cut(s) 418, 690
PfeI GAWTC 1 cut(s) 514
PflMI CCANNNNNTGG 1 cut(s) 731
PfoI TCCNGGA 1 cut(s) 802
PkrI GCNGC 3 cut(s) 152, 322, 535
PleI GAGTC 1 cut(s) 807
PpsI GAGTC 1 cut(s) 807
PshBI ATTAAT 1 cut(s) 17
Psp124BI GAGCTC 1 cut(s) 503
Psp1406I AACGTT 1 cut(s) 66
Psp6I CCWGG 1 cut(s) 802
PspGI CCWGG 1 cut(s) 802
PspPI GGNCC 1 cut(s) 92
RsaI GTAC 2 cut(s) 40, 346
RsaNI GTAC 2 cut(s) 39, 345
SacI GAGCTC 1 cut(s) 503
SaqAI TTAA 5 cut(s) 17, 69, 285, 659, 762
SatI GCNGC 3 cut(s) 151, 321, 534
Sau3AI GATC 2 cut(s) 547, 683
Sau96I GGNCC 1 cut(s) 92
SchI GAGTC 1 cut(s) 808
ScrFI CCNGG 1 cut(s) 804
SduI GDGCHC 3 cut(s) 270, 503, 623
SfaNI GCATC 1 cut(s) 472
SinI GGWCC 1 cut(s) 92
SmlI CTYRAG 2 cut(s) 78, 736
SmoI CTYRAG 2 cut(s) 78, 736
Sse9I AATT 9 cut(s) 45, 70, 223, 282, 557, 629, 661, 714, 747
SsiI CCGC 1 cut(s) 400
SspI AATATT 1 cut(s) 111
SspMI CTAG 1 cut(s) 521
SstI GAGCTC 1 cut(s) 503
StyD4I CCNGG 1 cut(s) 802
TaaI ACNGT 1 cut(s) 119
TaiI ACGT 1 cut(s) 69
TaqI TCGA 4 cut(s) 11, 274, 470, 517
TasI AATT 9 cut(s) 45, 70, 223, 282, 557, 629, 661, 714, 747
TatI WGTACW 2 cut(s) 38, 344
TfiI GAWTC 1 cut(s) 514
Tru1I TTAA 5 cut(s) 17, 69, 285, 659, 762
Tru9I TTAA 5 cut(s) 17, 69, 285, 659, 762
TscAI CASTG 3 cut(s) 122, 151, 623
TseI GCWGC 3 cut(s) 150, 320, 533
TspDTI ATGAA 1 cut(s) 759
TspRI CASTG 3 cut(s) 122, 151, 623
Van91I CCANNNNNTGG 1 cut(s) 731
VneI GTGCAC 1 cut(s) 619
VpaK11BI GGWCC 1 cut(s) 92
VspI ATTAAT 1 cut(s) 17
XapI RAATTY 3 cut(s) 45, 557, 747
XspI CTAG 1 cut(s) 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.