Rroxscaffold_1G00046550

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
65777869 .. 65780930
3062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00046550.1

Sequence Viewer

Length: 1665 bp
ATGGGATCCTCGGTATGGCTACTTCTTTTCTTCTTCGTTCCCATAACCTTACACCACCTTGTTGCTCAAACCATAATAAAAGGCGACGTCTCATGCACTTCGAGGGCTGAATTGTGCTGGAGCTGTGCTGATTCCCGCAAATACACTAATGGCAGCATCTACCAACAAAACCTCATCAGCCTCCTCTCCTCCTTTTCCAACACTTCCCAAAACCAAACCACCTATGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATTGCATTGTGCAGAGGAGACCTCGCACTCGGAGAATGTAGTAGCTGTCTCAGCGACTCCACTCAGATTCTCCTGCAAAACTGTTCATATAAAACGGAAGCAATCTTATGGGCAGAGCCTTGCATGGTACGAGCTACTTCAGGTGATTCTCGAAAAAAATATGCTGCAGGACATGCAGTTGTTCCAGCTCCAGCAGGAGATGCAGACGATCGCGAACCGATATATGCACATGCGCAGTGCACTCCGGACATAGACAAAGTCAATTGCCGTAATTGCCTGAACAGTTGCATCTCTGCTATTCCACGATGTTGCAGTGTAAAGTCAGGAACAAGAGTTCTTAGACCAAGTTGTAATATAAGGTTTGAGTACAATCTTTTCTACAATTCTACAGTCGATTCAGAATTAAATATTTCAGTTTCAGCTACAGCTCCAGCTCCAGTACTTCCACCTAAGCAAGGAAAGAAGAGTAACACAAAAAGAAATATCATCATAATAATTGTGGTTGTGATTACTTTTGTCACGATGCTTCTCGGTGGCATATGCATTTTCTTAAGAGTCAAGAAGCCAAGGGTAAAACTTGACGATGATTTTTCTGGAGAAATTAGTCTCGTGGAATCGTTGCAATATAACTTTGAAGATATTAAACCTGCAACGGATGACTTTTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGATCATAGAAGGAATTGTTCGTGGTCTTCTTTACCTGCATGAAGATTCTCGACTTCGAGTTATTCACCGTGATCTCAAAGCCAGCAACATTTTGTTGGATGAAGATATGAACCCTAAAATTGCAGATTTTGGTATGGCAAGGTTGTTTGTGATGGATCAAACTCAAGCAGATACAAAAACCATTGTTGGGACCTATGGATACATGGCACCTGAATATGCAAGTCATGGGCGCTTTTCTGTCAAGTCAGATGTCTTTAGTTTTGGTGTGTTAGTTCTTGAAATAATTACCGGCAAGAAGAGTGGTACTTTCCGAAATGGTGAAAATGAAGACGACCTCTTAAGCTACGCCTGGAGAAATTGGAGGGATGATACAACTCTAAATATCATAGATCCCATGTTAACAACAGGCTCAAGATCTGAAATAATCAGATGCATCCAGATTGGGTTATTATGTGTCCAAGAAAATTTGAATGACAGACCAACCATGGGTTCAGTTGTTTCCATGCTTAATAGTCATTCTCTCAAAATCTCGATACCTTCACGGCCTCCATATTATTGGCAGTATAACACTGAGTCAGAGACATCAGGATCGGGATTCAGACTTACTGAGTCGTCTGATAAATCCCGAAGCTCTGTGTCAAGAGGTATGATTTCAGATATTACTGAACTACATCCACGCTAG

Protein Analysis

554

Amino Acids

61.31

Weight (kDa)

6.79

Isoelectric Point (pI)

42.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 42 - 136 2.7e-19 Salt stress response/antifungal
Stress-antifung PF01657 157 - 213 1.1e-07 Salt stress response/antifungal
PK_Tyr_Ser-Thr PF07714 327 - 496 6.1e-25 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 328 - 436 4.5e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 90
Acc16I TGCGCA 1 cut(s) 507
Acc36I ACCTGC 2 cut(s) 928, 1026
AccB1I GGYRCC 1 cut(s) 1189
AccII CGCG 1 cut(s) 486
AccIII TCCGGA 1 cut(s) 517
AciI CCGC 1 cut(s) 136
AclWI GGATC 4 cut(s) 13, 1146, 1367, 1579
AcsI RAATTY 1 cut(s) 1447
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 4 cut(s) 402, 641, 714, 1288
AfiI CCNNNNNNNGG 4 cut(s) 15, 728, 1170, 1469
AflII CTTAAG 2 cut(s) 823, 1321
AgsI TTSAA 3 cut(s) 908, 1262, 1453
AjnI CCWGG 1 cut(s) 1331
AjuI GAANNNNNNNTTGG 4 cut(s) 936, 968, 1456, 1488
AloI GAACNNNNNNTCC 2 cut(s) 591, 623
Alw21I GWGCWC 1 cut(s) 515
Alw26I GTCTC 5 cut(s) 94, 285, 326, 884, 1556
Alw44I GTGCAC 1 cut(s) 511
AlwI GGATC 4 cut(s) 13, 1146, 1367, 1579
Aor13HI TCCGGA 1 cut(s) 517
AoxI GGCC 1 cut(s) 1526
ApaLI GTGCAC 1 cut(s) 511
ApeKI GCWGC 2 cut(s) 153, 437
ApoI RAATTY 1 cut(s) 1447
AspLEI GCGC 2 cut(s) 508, 1215
AspS9I GGNCC 1 cut(s) 1173
AsuHPI GGTGA 3 cut(s) 428, 1040, 1313
AvaII GGWCC 1 cut(s) 1173
BaeGI GKGCMC 1 cut(s) 515
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1189
BarI GAAGNNNNNNTAC 1 cut(s) 38
BauI CACGAG 1 cut(s) 881
BbsI GAAGAC 2 cut(s) 1001, 1317
Bbv12I GWGCWC 1 cut(s) 515
BbvI GCAGC 2 cut(s) 165, 424
BccI CCATC 1 cut(s) 1129
BceAI ACGGC 2 cut(s) 525, 1541
BciT130I CCWGG 1 cut(s) 1333
BciVI GTATCC 1 cut(s) 1175
BcoDI GTCTC 5 cut(s) 94, 285, 326, 884, 1556
BfaI CTAG 1 cut(s) 1663
BfmI CTRYAG 3 cut(s) 438, 660, 696
BfoI RGCGCY 1 cut(s) 1216
BfrI CTTAAG 2 cut(s) 823, 1321
BfuAI ACCTGC 2 cut(s) 928, 1026
BfuI GTATCC 1 cut(s) 1175
BglII AGATCT 1 cut(s) 1397
BisI GCNGC 2 cut(s) 154, 438
BlsI GCNGC 2 cut(s) 155, 439
BmcAI AGTACT 1 cut(s) 714
Bme1390I CCNGG 1 cut(s) 1333
Bme18I GGWCC 1 cut(s) 1173
BmgT120I GGNCC 1 cut(s) 1173
BmiI GGNNCC 4 cut(s) 7, 256, 1174, 1191
BmrFI CCNGG 1 cut(s) 1333
BmsI GCATC 6 cut(s) 165, 463, 570, 786, 1403, 1425
BpiI GAAGAC 2 cut(s) 1001, 1317
BplI GAGNNNNNCTC 2 cut(s) 279, 311
BpmI CTGGAG 6 cut(s) 139, 447, 687, 693, 888, 1354
Bpu10I CCTNAGC 1 cut(s) 723
BpuEI CTTGAG 2 cut(s) 1131, 1378
BsaHI GRCGYC 1 cut(s) 87
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 9, 839, 1467
BsaWI WCCGGW 1 cut(s) 517
Bsc4I CCNNNNNNNGG 4 cut(s) 15, 728, 1170, 1469
Bse118I RCCGGY 1 cut(s) 1271
Bse1I ACTGG 1 cut(s) 710
Bse3DI GCAATG 1 cut(s) 273
BseAI TCCGGA 1 cut(s) 517
BseBI CCWGG 1 cut(s) 1333
BseDI CCNNGG 3 cut(s) 9, 839, 1467
BseGI GGATG 5 cut(s) 934, 1087, 1354, 1416, 1654
BseLI CCNNNNNNNGG 4 cut(s) 15, 728, 1170, 1469
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 4 cut(s) 337, 350, 1545, 1581
BseNI ACTGG 1 cut(s) 710
BseRI GAGGAG 3 cut(s) 173, 178, 303
BseSI GKGCMC 1 cut(s) 515
BseXI GCAGC 2 cut(s) 165, 424
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 484
BshFI GGCC 1 cut(s) 1528
BshNI GGYRCC 1 cut(s) 1189
BsiEI CGRYCG 1 cut(s) 484
BsiHKAI GWGCWC 1 cut(s) 515
BsiSI CCGG 2 cut(s) 518, 1272
BslFI GGGAC 1 cut(s) 1186
BslI CCNNNNNNNGG 4 cut(s) 15, 728, 1170, 1469
BsmAI GTCTC 5 cut(s) 94, 285, 326, 884, 1556
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 1186
BsmI GAATGC 1 cut(s) 274
BsnI GGCC 1 cut(s) 1528
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 1 cut(s) 515
Bsp13I TCCGGA 1 cut(s) 517
Bsp143I GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
Bsp19I CCATGG 1 cut(s) 1467
Bsp68I TCGCGA 1 cut(s) 486
BspACI CCGC 1 cut(s) 136
BspANI GGCC 1 cut(s) 1528
BspCNI CTCAG 4 cut(s) 336, 349, 1546, 1582
BspEI TCCGGA 1 cut(s) 517
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 4 cut(s) 7, 256, 1174, 1191
BspMAI CTGCAG 1 cut(s) 442
BspMI ACCTGC 2 cut(s) 928, 1026
BspPI GGATC 4 cut(s) 13, 1146, 1367, 1579
BspT107I GGYRCC 1 cut(s) 1189
BspTI CTTAAG 2 cut(s) 823, 1321
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 273
BsrFI RCCGGY 1 cut(s) 1271
BsrI ACTGG 1 cut(s) 710
BssAI RCCGGY 1 cut(s) 1271
BssECI CCNNGG 3 cut(s) 9, 839, 1467
BssMI GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
BssNI GRCGYC 1 cut(s) 87
BssSI CACGAG 1 cut(s) 881
BssT1I CCWWGG 2 cut(s) 839, 1467
Bst2BI CACGAG 1 cut(s) 881
Bst2UI CCWGG 1 cut(s) 1333
Bst4CI ACNGT 4 cut(s) 356, 557, 664, 1052
Bst6I CTCTTC 3 cut(s) 244, 731, 1274
BstACI GRCGYC 1 cut(s) 87
BstAFI CTTAAG 2 cut(s) 823, 1321
BstAPI GCANNNNNTGC 2 cut(s) 446, 473
BstC8I GCNNGC 1 cut(s) 1066
BstDEI CTNAG 6 cut(s) 323, 336, 611, 723, 1554, 1590
BstDSI CCRYGG 1 cut(s) 1467
BstENI CCTNNNNNAGG 1 cut(s) 726
BstF5I GGATG 5 cut(s) 934, 1087, 1354, 1416, 1654
BstFNI CGCG 1 cut(s) 486
BstH2I RGCGCY 1 cut(s) 1216
BstHHI GCGC 2 cut(s) 508, 1215
BstKTI GATC 8 cut(s) 8, 484, 987, 1057, 1141, 1375, 1400, 1574
BstMAI GTCTC 5 cut(s) 94, 285, 326, 884, 1556
BstMBI GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
BstMCI CGRYCG 1 cut(s) 484
BstMWI GCNNNNNNNGC 4 cut(s) 324, 446, 473, 546
BstNI CCWGG 1 cut(s) 1333
BstNSI RCATGY 2 cut(s) 449, 506
BstSCI CCNGG 1 cut(s) 1331
BstSFI CTRYAG 3 cut(s) 438, 660, 696
BstSLI GKGCMC 1 cut(s) 515
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 2 cut(s) 165, 424
BstV2I GAAGAC 2 cut(s) 1001, 1317
BstX2I RGATCY 3 cut(s) 5, 1372, 1397
BstXI CCANNNNNNTGG 1 cut(s) 1539
BstYI RGATCY 3 cut(s) 5, 1372, 1397
BsuI GTATCC 1 cut(s) 1175
BsuRI GGCC 1 cut(s) 1528
BtgI CCRYGG 1 cut(s) 1467
BtsCI GGATG 5 cut(s) 934, 1087, 1354, 1416, 1654
BtsI GCAGTG 2 cut(s) 515, 592
BtsIMutI CAGTG 3 cut(s) 515, 592, 1551
BtuMI TCGCGA 1 cut(s) 486
BveI ACCTGC 2 cut(s) 928, 1026
Cac8I GCNNGC 1 cut(s) 1066
CfoI GCGC 2 cut(s) 508, 1215
Cfr10I RCCGGY 1 cut(s) 1271
Cfr13I GGNCC 1 cut(s) 1173
Csp6I GTAC 4 cut(s) 401, 640, 713, 1287
CspCI CAANNNNNGTGG 2 cut(s) 1264, 1299
CviQI GTAC 4 cut(s) 401, 640, 713, 1287
DdeI CTNAG 6 cut(s) 323, 336, 611, 723, 1554, 1590
DpnI GATC 8 cut(s) 7, 483, 986, 1056, 1140, 1374, 1399, 1573
DpnII GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
Eam1104I CTCTTC 3 cut(s) 244, 731, 1274
EarI CTCTTC 3 cut(s) 244, 731, 1274
Eco130I CCWWGG 2 cut(s) 839, 1467
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 1173
Eco57I CTGAAG 1 cut(s) 396
EcoNI CCTNNNNNAGG 1 cut(s) 726
EcoO109I RGGNCCY 1 cut(s) 1173
EcoRII CCWGG 1 cut(s) 1331
EcoT14I CCWWGG 2 cut(s) 839, 1467
EcoT22I ATGCAT 2 cut(s) 818, 1418
ErhI CCWWGG 2 cut(s) 839, 1467
Esp3I CGTCTC 1 cut(s) 94
FaqI GGGAC 1 cut(s) 1186
FauI CCCGC 1 cut(s) 143
FauNDI CATATG 1 cut(s) 812
Fnu4HI GCNGC 2 cut(s) 154, 438
FokI GGATG 5 cut(s) 941, 1094, 1361, 1403, 1641
Fsp4HI GCNGC 2 cut(s) 154, 438
FspBI CTAG 1 cut(s) 1663
FspI TGCGCA 1 cut(s) 507
GlaI GCGC 2 cut(s) 507, 1214
GluI GCNGC 2 cut(s) 154, 438
GsuI CTGGAG 6 cut(s) 139, 447, 687, 693, 888, 1354
HaeII RGCGCY 1 cut(s) 1216
HaeIII GGCC 1 cut(s) 1528
HapII CCGG 2 cut(s) 518, 1272
HhaI GCGC 2 cut(s) 508, 1215
Hin1I GRCGYC 1 cut(s) 87
Hin6I GCGC 2 cut(s) 506, 1213
HinP1I GCGC 2 cut(s) 506, 1213
HincII GTYRAC 1 cut(s) 1383
HindII GTYRAC 1 cut(s) 1383
HindIII AAGCTT 1 cut(s) 950
HpaI GTTAAC 1 cut(s) 1383
HpaII CCGG 2 cut(s) 518, 1272
HphI GGTGA 3 cut(s) 428, 1040, 1313
Hpy166II GTNNAC 3 cut(s) 513, 979, 1383
Hpy8I GTNNAC 3 cut(s) 513, 979, 1383
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 2 cut(s) 986, 1530
HpyCH4III ACNGT 4 cut(s) 356, 557, 664, 1052
HpyCH4IV ACGT 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 4 cut(s) 324, 446, 473, 546
HpyF3I CTNAG 6 cut(s) 323, 336, 611, 723, 1554, 1590
HpySE526I ACGT 1 cut(s) 87
Hsp92I GRCGYC 1 cut(s) 87
HspAI GCGC 2 cut(s) 506, 1213
Kpn2I TCCGGA 1 cut(s) 517
KspAI GTTAAC 1 cut(s) 1383
Kzo9I GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
LmnI GCTCC 6 cut(s) 120, 260, 466, 706, 712, 971
Lsp1109I GCAGC 2 cut(s) 165, 424
LweI GCATC 6 cut(s) 165, 463, 570, 786, 1403, 1425
MaeI CTAG 1 cut(s) 1663
MaeII ACGT 1 cut(s) 87
MaeIII GTNAC 2 cut(s) 740, 790
MalI GATC 8 cut(s) 7, 483, 986, 1056, 1140, 1374, 1399, 1573
MboI GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
MfeI CAATTG 1 cut(s) 535
MflI RGATCY 3 cut(s) 5, 1372, 1397
MhlI GDGCHC 1 cut(s) 515
MlyI GAGTC 4 cut(s) 323, 837, 1565, 1601
MmeI TCCRAC 3 cut(s) 222, 282, 1059
Mph1103I ATGCAT 2 cut(s) 818, 1418
MroI TCCGGA 1 cut(s) 517
MseI TTAA 6 cut(s) 677, 824, 915, 1322, 1382, 1491
MspCI CTTAAG 2 cut(s) 823, 1321
MspI CCGG 2 cut(s) 518, 1272
MspR9I CCNGG 1 cut(s) 1333
MunI CAATTG 1 cut(s) 535
Mva1269I GAATGC 1 cut(s) 274
MvaI CCWGG 1 cut(s) 1333
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 4 cut(s) 324, 446, 473, 546
NcoI CCATGG 1 cut(s) 1467
NdeI CATATG 1 cut(s) 812
NdeII GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
NlaIV GGNNCC 4 cut(s) 7, 256, 1174, 1191
NmuCI GTSAC 1 cut(s) 790
NruI TCGCGA 1 cut(s) 486
NsbI TGCGCA 1 cut(s) 507
NsiI ATGCAT 2 cut(s) 818, 1418
NspI RCATGY 2 cut(s) 449, 506
PctI GAATGC 1 cut(s) 274
PfeI GAWTC 7 cut(s) 131, 340, 419, 668, 887, 1028, 1578
PflFI GACNNNGTC 1 cut(s) 530
PkrI GCNGC 2 cut(s) 155, 439
Ple19I CGATCG 1 cut(s) 484
PleI GAGTC 4 cut(s) 323, 836, 1564, 1600
PpsI GAGTC 4 cut(s) 323, 836, 1564, 1600
PpuMI RGGWCCY 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 1173
Psp6I CCWGG 1 cut(s) 1331
PspGI CCWGG 1 cut(s) 1331
PspN4I GGNNCC 4 cut(s) 7, 256, 1174, 1191
PspPI GGNCC 1 cut(s) 1173
PspPPI RGGWCCY 1 cut(s) 1173
PstI CTGCAG 1 cut(s) 442
PsuI RGATCY 3 cut(s) 5, 1372, 1397
PsyI GACNNNGTC 1 cut(s) 530
PvuI CGATCG 1 cut(s) 484
RruI TCGCGA 1 cut(s) 486
RsaI GTAC 4 cut(s) 402, 641, 714, 1288
RsaNI GTAC 4 cut(s) 401, 640, 713, 1287
SaqAI TTAA 6 cut(s) 677, 824, 915, 1322, 1382, 1491
SatI GCNGC 2 cut(s) 154, 438
Sau3AI GATC 8 cut(s) 5, 481, 984, 1054, 1138, 1372, 1397, 1571
Sau96I GGNCC 1 cut(s) 1173
ScaI AGTACT 1 cut(s) 714
SchI GAGTC 4 cut(s) 323, 837, 1565, 1601
ScrFI CCNGG 1 cut(s) 1333
SduI GDGCHC 1 cut(s) 515
SfaNI GCATC 6 cut(s) 165, 463, 570, 786, 1403, 1425
SfcI CTRYAG 3 cut(s) 438, 660, 696
SinI GGWCC 1 cut(s) 1173
SmlI CTYRAG 4 cut(s) 823, 1146, 1321, 1393
SmoI CTYRAG 4 cut(s) 823, 1146, 1321, 1393
SsiI CCGC 1 cut(s) 136
SspI AATATT 1 cut(s) 682
SspMI CTAG 1 cut(s) 1663
StyD4I CCNGG 1 cut(s) 1331
StyI CCWWGG 2 cut(s) 839, 1467
TaaI ACNGT 4 cut(s) 356, 557, 664, 1052
TaiI ACGT 1 cut(s) 90
TaqI TCGA 6 cut(s) 101, 424, 666, 1033, 1039, 1514
TatI WGTACW 2 cut(s) 639, 712
TfiI GAWTC 7 cut(s) 131, 340, 419, 668, 887, 1028, 1578
Tru1I TTAA 6 cut(s) 677, 824, 915, 1322, 1382, 1491
Tru9I TTAA 6 cut(s) 677, 824, 915, 1322, 1382, 1491
TscAI CASTG 3 cut(s) 515, 592, 1558
TseFI GTSAC 1 cut(s) 790
TseI GCWGC 2 cut(s) 153, 437
Tsp45I GTSAC 1 cut(s) 790
TspDTI ATGAA 6 cut(s) 348, 957, 1038, 1098, 1106, 1323
TspGWI ACGGA 2 cut(s) 383, 941
TspRI CASTG 3 cut(s) 515, 592, 1558
Tth111I GACNNNGTC 1 cut(s) 530
Vha464I CTTAAG 2 cut(s) 823, 1321
VneI GTGCAC 1 cut(s) 511
VpaK11BI GGWCC 1 cut(s) 1173
XagI CCTNNNNNAGG 1 cut(s) 726
XapI RAATTY 1 cut(s) 1447
XceI RCATGY 2 cut(s) 449, 506
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XspI CTAG 1 cut(s) 1663
ZraI GACGTC 1 cut(s) 88
ZrmI AGTACT 1 cut(s) 714
Zsp2I ATGCAT 2 cut(s) 818, 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.