Rroxscaffold_1G00046600

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000086
Physical Location & Seq
Forward (+)
65877316 .. 65884080
6765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00046600.1

Sequence Viewer

Length: 1542 bp
ATGGGATCCTCAATATGGCTGGTTCTTATTTTATTCATTGTTCATATAGCCCTAGACCAGCTTATTGCTCCCACCAAAGCCCAAGAGAACGGTGAATGCACTGATAAAGTTGAATACTGCTGGAAATGTTCCGATTACAGCCGTTATGCTAATGACAGCATCTACCAACAAAACCTCAACAGCCTCCTCTCCTCCTTCTCTTCCAGCCCTACCCAGAACCAAGCTGACTTTGGGTTTTACAACTCTTCTCTTGGCCAAGGCTCCGACATGGAGACCAAGGAGTCGAAGACTGTAGTAGCTGTGTCAGAGACTCTACTGAGATTATCCTGCGAAATTGTTCGCAGAAAAAAGGAAGCGATCTTATGGTCAGAGATTTGCATGGTACGGTACTCTCCAAACTTAATATTTGGTACTGTGGAAAAGGACCCAGTTATCCGTGCGGACAGCAAAAACAACGCGTTAAACGCGGAAGCGTTCGCGCAGGTGCTTAACCTCTTGTTGCAAAATTTACGTGACAGAGCTGCTTCAGGGAATTCTAGTGAAAAATTTGCAGCAGGACATGCACCGACTGATGAAGGCCAAACAATATATGCACTTGTGCAGTGCACTCCGGATATAGACAAAGGAGATTGCAGTAATTGCCTTGGAAGTTGCATCTCTGATATTCCATCGTGTTGTGATGGAAAGGAAGGAGCTAGAATTCTTAAACCAAGCTGTAATATAAGGTATGAGGTCAGTCGGTTCTATAAATCTACAGTTGATTCAGTAGTAGATGTTTCAGCTCCTCCAGCAACTCCAACAACTCCAGAAACTCCAGCTCCACCTAAGCAAGGAAAGAAGAGTAACACAATAAAAACTATCATCATCATCATTGTGGTTGTGATTGCTTTTGTGACTATGCTTCTCGGTGGCACATGCATTTTCTTACAAGTTAAGAAACCATGGGTAAAACTTGAATATGATCGTATTTCACAAGAAATGAGTTTCGTGAATTCATTACAATATGACTTTGAAATTATAAGATCTGCAACGGATGAATTTTCTGATGCTAATAAGCTTGGTCAAGGTGGATTTGGAGATGTTTACAAGGGTAGGCTATCAAATGGACAATATATTGCTGTGAAAATGCTCTCCAAGAGTTCTAAACAGGGTGATCGTGAATTTAAAAATGAAGTCAGGTTACTTGCTCCACTTCAACACAGGAACTTGGTAAAATTAGTAGGCTTTTGCATAAAAGGAGGGGAAAGGCTCCTCATTTATGAATATGTACCCAATACAAGCCTTAATCACTACATTTTTGATCATATCAATCATGAACATTTGGATTGGGAAACACGTTACAATATCATAGGAGGAATTGTTCGTGGTCTTCTTTATCTTCATGAAGATTCTCGAATACGAGTTATTCACTGCGATCTCAAACTCAGCAACATTTTGCTAGGTGAAGATATGAACCCTAAAATTGCAGATTTTGGTACTGCAAGATTGTTTGTCAAGGGTCAAACTCAGGGAGATGCAAAGACTATTGTTGGGACTGAGTAA

Protein Analysis

513

Amino Acids

57.08

Weight (kDa)

6.35

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 151 - 244 2.1e-14 Salt stress response/antifungal
Pkinase PF00069 348 - 512 9.4e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 501 1.5e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1019
AarI CACCTGC 1 cut(s) 472
AasI GACNNNNNNGTC 1 cut(s) 280
Acc36I ACCTGC 1 cut(s) 472
AccII CGCG 3 cut(s) 458, 467, 479
AccIII TCCGGA 1 cut(s) 610
AciI CCGC 2 cut(s) 440, 467
AclWI GGATC 1 cut(s) 13
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 7 cut(s) 505, 532, 545, 699, 991, 1037, 1160
AcuI CTGAAG 1 cut(s) 510
AfaI GTAC 5 cut(s) 384, 389, 412, 1269, 1477
AfiI CCNNNNNNNGG 2 cut(s) 15, 830
AflIII ACRYGT 2 cut(s) 456, 1334
AgsI TTSAA 4 cut(s) 113, 956, 1013, 1196
AloI GAACNNNNNNTCC 2 cut(s) 1344, 1376
AluBI AGCT 9 cut(s) 61, 224, 299, 521, 695, 714, 782, 818, 1057
AluI AGCT 9 cut(s) 61, 224, 299, 521, 695, 714, 782, 818, 1057
Alw21I GWGCWC 1 cut(s) 608
Alw26I GTCTC 2 cut(s) 266, 302
Alw44I GTGCAC 1 cut(s) 604
AlwI GGATC 1 cut(s) 13
Aor13HI TCCGGA 1 cut(s) 610
AoxI GGCC 2 cut(s) 253, 577
ApaLI GTGCAC 1 cut(s) 604
ApeKI GCWGC 2 cut(s) 521, 551
ApoI RAATTY 7 cut(s) 505, 532, 545, 699, 991, 1037, 1160
Asp700I GAANNNNTTC 1 cut(s) 336
AspLEI GCGC 1 cut(s) 481
AspS9I GGNCC 1 cut(s) 424
AsuHPI GGTGA 3 cut(s) 104, 1163, 1454
AvaII GGWCC 1 cut(s) 424
BaeGI GKGCMC 1 cut(s) 608
BalI TGGCCA 1 cut(s) 255
BamHI GGATCC 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 1164, 1196
BbsI GAAGAC 2 cut(s) 293, 1361
Bbv12I GWGCWC 1 cut(s) 608
BbvI GCAGC 2 cut(s) 508, 563
BccI CCATC 2 cut(s) 674, 676
BceAI ACGGC 1 cut(s) 126
BclI TGATCA 1 cut(s) 1300
BcoDI GTCTC 2 cut(s) 266, 302
BfaI CTAG 4 cut(s) 53, 537, 696, 1439
BfmI CTRYAG 2 cut(s) 291, 753
BfuAI ACCTGC 1 cut(s) 472
BglII AGATCT 1 cut(s) 1022
BisI GCNGC 2 cut(s) 522, 552
BlsI GCNGC 2 cut(s) 523, 553
Bme18I GGWCC 1 cut(s) 424
BmgT120I GGNCC 1 cut(s) 424
BmiI GGNNCC 4 cut(s) 7, 262, 426, 1250
BmrI ACTGGG 1 cut(s) 422
BmsI GCATC 4 cut(s) 168, 663, 1036, 1504
BmuI ACTGGG 1 cut(s) 422
BpiI GAAGAC 2 cut(s) 293, 1361
BpmI CTGGAG 3 cut(s) 771, 789, 798
Bpu10I CCTNAGC 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 4 cut(s) 256, 276, 643, 941
BsaWI WCCGGW 1 cut(s) 610
BsaXI ACNNNNNCTCC 4 cut(s) 802, 832, 1344, 1374
Bsc4I CCNNNNNNNGG 2 cut(s) 15, 830
Bse1I ACTGG 1 cut(s) 428
BseAI TCCGGA 1 cut(s) 610
BseDI CCNNGG 4 cut(s) 256, 276, 643, 941
BseGI GGATG 1 cut(s) 1039
BseLI CCNNNNNNNGG 2 cut(s) 15, 830
BseMII CTCAG 4 cut(s) 308, 1438, 1520, 1527
BseNI ACTGG 1 cut(s) 428
BseRI GAGGAG 4 cut(s) 176, 181, 774, 1241
BseSI GKGCMC 1 cut(s) 608
BseXI GCAGC 2 cut(s) 508, 563
BsgI GTGCAG 1 cut(s) 620
Bsh1236I CGCG 3 cut(s) 458, 467, 479
BshFI GGCC 2 cut(s) 255, 579
BsiHKAI GWGCWC 1 cut(s) 608
BsiSI CCGG 1 cut(s) 611
BslI CCNNNNNNNGG 2 cut(s) 15, 830
BsmAI GTCTC 2 cut(s) 266, 302
BsmI GAATGC 1 cut(s) 101
BsnI GGCC 2 cut(s) 255, 579
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 608
Bsp13I TCCGGA 1 cut(s) 610
Bsp143I GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
Bsp19I CCATGG 1 cut(s) 941
BspACI CCGC 2 cut(s) 440, 467
BspANI GGCC 2 cut(s) 255, 579
BspCNI CTCAG 4 cut(s) 309, 1437, 1519, 1528
BspEI TCCGGA 1 cut(s) 610
BspFNI CGCG 3 cut(s) 458, 467, 479
BspHI TCATGA 2 cut(s) 1312, 1381
BspLI GGNNCC 4 cut(s) 7, 262, 426, 1250
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 1 cut(s) 13
BspTNI GGTCTC 1 cut(s) 266
BsrI ACTGG 1 cut(s) 428
BssECI CCNNGG 4 cut(s) 256, 276, 643, 941
BssMI GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
BssT1I CCWWGG 4 cut(s) 256, 276, 643, 941
Bst4CI ACNGT 5 cut(s) 92, 292, 387, 415, 757
Bst6I CTCTTC 3 cut(s) 205, 250, 833
BstAPI GCANNNNNTGC 2 cut(s) 560, 639
BstBAI YACGTR 1 cut(s) 512
BstDEI CTNAG 5 cut(s) 317, 825, 1424, 1506, 1536
BstDSI CCRYGG 1 cut(s) 941
BstENI CCTNNNNNAGG 1 cut(s) 828
BstF5I GGATG 1 cut(s) 1039
BstFNI CGCG 3 cut(s) 458, 467, 479
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 7 cut(s) 8, 360, 964, 1025, 1156, 1303, 1417
BstMAI GTCTC 2 cut(s) 266, 302
BstMBI GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
BstMWI GCNNNNNNNGC 4 cut(s) 464, 560, 639, 788
BstNSI RCATGY 2 cut(s) 563, 918
BstSFI CTRYAG 2 cut(s) 291, 753
BstSLI GKGCMC 1 cut(s) 608
BstUI CGCG 3 cut(s) 458, 467, 479
BstV1I GCAGC 2 cut(s) 508, 563
BstV2I GAAGAC 2 cut(s) 293, 1361
BstX2I RGATCY 2 cut(s) 5, 1022
BstYI RGATCY 2 cut(s) 5, 1022
BsuRI GGCC 2 cut(s) 255, 579
BtgI CCRYGG 1 cut(s) 941
BtsCI GGATG 1 cut(s) 1039
BtsI GCAGTG 2 cut(s) 608, 1408
BtsIMutI CAGTG 3 cut(s) 99, 608, 1408
BveI ACCTGC 1 cut(s) 472
CciI TCATGA 2 cut(s) 1312, 1381
CfoI GCGC 1 cut(s) 481
Cfr13I GGNCC 1 cut(s) 424
Csp6I GTAC 5 cut(s) 383, 388, 411, 1268, 1476
CviAII CATG 7 cut(s) 268, 379, 560, 915, 942, 1313, 1382
CviQI GTAC 5 cut(s) 383, 388, 411, 1268, 1476
DdeI CTNAG 5 cut(s) 317, 825, 1424, 1506, 1536
DpnI GATC 7 cut(s) 7, 359, 963, 1024, 1155, 1302, 1416
DpnII GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
DraI TTTAAA 1 cut(s) 1165
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 253
Eam1104I CTCTTC 3 cut(s) 205, 250, 833
EarI CTCTTC 3 cut(s) 205, 250, 833
Eco130I CCWWGG 4 cut(s) 256, 276, 643, 941
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 1 cut(s) 424
Eco57I CTGAAG 1 cut(s) 510
EcoNI CCTNNNNNAGG 1 cut(s) 828
EcoO109I RGGNCCY 1 cut(s) 424
EcoRI GAATTC 3 cut(s) 532, 699, 991
EcoT14I CCWWGG 4 cut(s) 256, 276, 643, 941
EcoT22I ATGCAT 1 cut(s) 920
ErhI CCWWGG 4 cut(s) 256, 276, 643, 941
FaeI CATG 7 cut(s) 271, 382, 563, 918, 945, 1316, 1385
FatI CATG 7 cut(s) 267, 378, 559, 914, 941, 1312, 1381
FbaI TGATCA 1 cut(s) 1300
Fnu4HI GCNGC 2 cut(s) 522, 552
FokI GGATG 1 cut(s) 1046
Fsp4HI GCNGC 2 cut(s) 522, 552
FspBI CTAG 4 cut(s) 53, 537, 696, 1439
GlaI GCGC 1 cut(s) 480
GluI GCNGC 2 cut(s) 522, 552
GsuI CTGGAG 3 cut(s) 771, 789, 798
HaeIII GGCC 2 cut(s) 255, 579
HapII CCGG 1 cut(s) 611
HhaI GCGC 1 cut(s) 481
Hin1II CATG 7 cut(s) 271, 382, 563, 918, 945, 1316, 1385
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HindIII AAGCTT 1 cut(s) 1055
HinfI GANTC 4 cut(s) 281, 310, 761, 1388
HpaII CCGG 1 cut(s) 611
HphI GGTGA 3 cut(s) 104, 1163, 1454
Hpy166II GTNNAC 2 cut(s) 606, 1084
Hpy188I TCNGA 6 cut(s) 133, 265, 307, 370, 661, 1045
Hpy188III TCNNGA 7 cut(s) 611, 806, 988, 1157, 1313, 1382, 1392
Hpy8I GTNNAC 2 cut(s) 606, 1084
HpyAV CCTTC 3 cut(s) 205, 569, 683
HpyCH4III ACNGT 5 cut(s) 92, 292, 387, 415, 757
HpyCH4IV ACGT 2 cut(s) 511, 1336
HpyF10VI GCNNNNNNNGC 4 cut(s) 464, 560, 639, 788
HpyF3I CTNAG 5 cut(s) 317, 825, 1424, 1506, 1536
HpySE526I ACGT 2 cut(s) 511, 1336
Hsp92II CATG 7 cut(s) 271, 382, 563, 918, 945, 1316, 1385
HspAI GCGC 1 cut(s) 479
Kpn2I TCCGGA 1 cut(s) 610
Ksp22I TGATCA 1 cut(s) 1300
Kzo9I GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
LmnI GCTCC 7 cut(s) 73, 266, 692, 787, 823, 1192, 1254
Lsp1109I GCAGC 2 cut(s) 508, 563
LweI GCATC 4 cut(s) 168, 663, 1036, 1504
MaeI CTAG 4 cut(s) 53, 537, 696, 1439
MaeII ACGT 2 cut(s) 511, 1336
MaeIII GTNAC 5 cut(s) 512, 842, 892, 1179, 1337
MalI GATC 7 cut(s) 7, 359, 963, 1024, 1155, 1302, 1416
MboI GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
MboII GAAGA 8 cut(s) 192, 237, 298, 850, 1361, 1370, 1397, 1457
MflI RGATCY 2 cut(s) 5, 1022
MhlI GDGCHC 1 cut(s) 608
MlsI TGGCCA 1 cut(s) 255
MluI ACGCGT 1 cut(s) 456
MluNI TGGCCA 1 cut(s) 255
MlyI GAGTC 2 cut(s) 290, 304
MmeI TCCRAC 2 cut(s) 288, 821
Mox20I TGGCCA 1 cut(s) 255
Mph1103I ATGCAT 1 cut(s) 920
MroI TCCGGA 1 cut(s) 610
MroXI GAANNNNTTC 1 cut(s) 336
MscI TGGCCA 1 cut(s) 255
MseI TTAA 7 cut(s) 401, 461, 489, 705, 933, 1164, 1284
MslI CAYNNNNRTG 1 cut(s) 872
Msp20I TGGCCA 1 cut(s) 255
MspI CCGG 1 cut(s) 611
Mva1269I GAATGC 1 cut(s) 101
MvnI CGCG 3 cut(s) 458, 467, 479
MwoI GCNNNNNNNGC 4 cut(s) 464, 560, 639, 788
NcoI CCATGG 1 cut(s) 941
NdeII GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
NlaIII CATG 7 cut(s) 271, 382, 563, 918, 945, 1316, 1385
NlaIV GGNNCC 4 cut(s) 7, 262, 426, 1250
NmuCI GTSAC 2 cut(s) 512, 892
NsiI ATGCAT 1 cut(s) 920
NspI RCATGY 2 cut(s) 563, 918
PagI TCATGA 2 cut(s) 1312, 1381
PaqCI CACCTGC 1 cut(s) 472
PctI GAATGC 1 cut(s) 101
PdmI GAANNNNTTC 1 cut(s) 336
PfeI GAWTC 2 cut(s) 761, 1388
PkrI GCNGC 2 cut(s) 523, 553
PleI GAGTC 2 cut(s) 289, 304
PpsI GAGTC 2 cut(s) 289, 304
Ppu21I YACGTR 1 cut(s) 512
PpuMI RGGWCCY 1 cut(s) 424
PsiI TTATAA 1 cut(s) 1019
Psp5II RGGWCCY 1 cut(s) 424
PspN4I GGNNCC 4 cut(s) 7, 262, 426, 1250
PspPI GGNCC 1 cut(s) 424
PspPPI RGGWCCY 1 cut(s) 424
PsuI RGATCY 2 cut(s) 5, 1022
RsaI GTAC 5 cut(s) 384, 389, 412, 1269, 1477
RsaNI GTAC 5 cut(s) 383, 388, 411, 1268, 1476
RseI CAYNNNNRTG 1 cut(s) 872
SaqAI TTAA 7 cut(s) 401, 461, 489, 705, 933, 1164, 1284
SatI GCNGC 2 cut(s) 522, 552
Sau3AI GATC 7 cut(s) 5, 357, 961, 1022, 1153, 1300, 1414
Sau96I GGNCC 1 cut(s) 424
SchI GAGTC 2 cut(s) 290, 304
SduI GDGCHC 1 cut(s) 608
SfaNI GCATC 4 cut(s) 168, 663, 1036, 1504
SfcI CTRYAG 2 cut(s) 291, 753
SinI GGWCC 1 cut(s) 424
SmiMI CAYNNNNRTG 1 cut(s) 872
SsiI CCGC 2 cut(s) 440, 467
SspI AATATT 1 cut(s) 405
SspMI CTAG 4 cut(s) 53, 537, 696, 1439
StyI CCWWGG 4 cut(s) 256, 276, 643, 941
TaaI ACNGT 5 cut(s) 92, 292, 387, 415, 757
TaiI ACGT 2 cut(s) 514, 1339
TaqI TCGA 2 cut(s) 284, 1393
TfiI GAWTC 2 cut(s) 761, 1388
Tru1I TTAA 7 cut(s) 401, 461, 489, 705, 933, 1164, 1284
Tru9I TTAA 7 cut(s) 401, 461, 489, 705, 933, 1164, 1284
TscAI CASTG 3 cut(s) 106, 608, 1415
TseFI GTSAC 2 cut(s) 512, 892
TseI GCWGC 2 cut(s) 521, 551
Tsp45I GTSAC 2 cut(s) 512, 892
TspGWI ACGGA 2 cut(s) 425, 1046
TspRI CASTG 3 cut(s) 106, 608, 1415
VneI GTGCAC 1 cut(s) 604
VpaK11BI GGWCC 1 cut(s) 424
XagI CCTNNNNNAGG 1 cut(s) 828
XapI RAATTY 7 cut(s) 505, 532, 545, 699, 991, 1037, 1160
XceI RCATGY 2 cut(s) 563, 918
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
XmnI GAANNNNTTC 1 cut(s) 336
XspI CTAG 4 cut(s) 53, 537, 696, 1439
Zsp2I ATGCAT 1 cut(s) 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.