RchiOBHm_Chr5g0004371

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000086
Physical Location & Seq
Forward (+)
2839717 .. 2842549
2833 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28562

Sequence Viewer

Length: 2070 bp
ATGGTTTCCTCAAGATTTCTATCGATGTTGCTCTCTCTCATTCTGTTACTTATGACCATGATGCCTGAAAACCTTGCTCAGTCTGCATATCCACCGTTTCTATACCATTTCTGCATAAATGAGAGAGGCAACTACACTGCAAATAGTACATATCATGAAAACCTCAAAACCCTTCTCTCCTCCCTTCCATCTAGCACCGGTAACGGCTATGGCTTTTACAATTCCTCATATGGCAGCGGTGAAAGCTCTAAAGACAAAGTTTACGCAATCGGACTTTGCAGAGGCGATGTTCAGCTAAATGATTGTCGTAGCTGCCTCAATGATTCAATACATGCTCTCCCAGAGATTTGTCCCAACCAGAAGGAAGCTCTTGGTTGGTACGACTATTGTATGCTTCGCTACTCAAACCGCTCCATTTATGGCATGACAGAAACTATGCCTGCTTTCTATTTATGGAACGTACAAAACGTCTCAGCGTCAAGCCTGGATGGCTTCAACCAAGAGCTTAGGAAGTTGCTGGAAAGCCTGAAAAGTGAAGCCGCAACTGGTGGTTCTCTGAGAAAGTTTGCAATCGGAAACGCCAGTTCTCCAGGCTTTATAACAGTATATGCACTTGTACAGTGTACGCCGGATTTGTCCGAGCCAGAGTGCAATGATTGCTTAGACGGTGCCTTTGCACAGATTCCAACCTGTTGTAATGGGAAGATAGGTGGGAGAGTTATTACACCCAGCTGTAACTTCAGATATGAAGTCTCCCGTTTTTTCAACACAACCGTGGTAGCGCTGCCATCGCCTCCTTTGGCATCACCAATATCTCCTCCACCATCAACAAATACTTCCACAACCCCCACAGGACTGAAGAGTAATAAATCTTCAACTCGAACTGTCGTCATTATTGTAGTGCCAATCGTTATCACTCTGGCACTAATTATATCCCTCTACGTTTGCTTAAAAGTAAGGAAGAGAAAGGAAAAACTTGAAATACTCCCAGGTGAAGATACAGATGAAATTAGAACTCCAGATTCCTTGCAGTTTGATTTTGACACCATCAGAGTTGCCACAAATAACTTTTCTGAAGCAAATAAACTTGGACAAGGCGGATTTGGTTCAGTTTACAAGGGTAGGCTTCTCAATGGAGAAGATATAGCAGTAAAAAGGCTTTCTATAAATTCAGGGCAAGGAGATTTAGAATTTAAAAATGAAGTGTTGCTAGTAGCCAAGCTTCAACACCGGAATTTAGTGAGGCTTCTTGGGTTTTGCTTGGAAAGAAACGAAAGACTTCTTGTGTATGAGTTTGTTCCTAACACAAGTCTTGATCACATCATATTTGACCGTACCAAGCGTGAACAGTTAGATTGGGCTATGCGCTACAAAATCATAGTAGGCATTACTCGAGGACTCCTTTATCTTCATGAGGACTCTCGCCTTAGAATCATACATCGTGATCTCAAAGCTAGTAATATCCTGATAGATGCAGAATTGAATCCTAAAATATCAGATTTTGGCATGGCAAAGTTATTTGTGCTTGATCAAACTCAAGGCAATACAAGTCGGATTGTTGGGACCTATGGATATATGGCTCCAGAATACGCAATGCATGGACAATTTTCTGTTAAGTCCGATGTCTATAGTTTTGGTGTATTAGTCTTGGAGATGGTAAGTGGACAGAAAAATAATTGCTTTCGTCAAGGAGAGAATGTGGAAGATCTTCTAAGCTATGCATGGAAAAGTTGGAGGGAAGGGACGGCTTCAAATTTAATAGATCCGACATTGCGGAATGGGTCGAGAACTGAAATAATGAGATGCATCCACATTGGGTTGTTATGCGTGCAAGATAATATAGCTGATAGGCCAACCATGGCATCTATCATCCTCATGCTTAATAGCTACTCTCTCAGTCTCCCACTACCCTCACAACCAGCATTTTTCATGCATAGCAATGTTGGATCCGACATGCGTTTGGGTTGGGAGGATAATTCAAGGGTGACAGGTTCATCCGATCGATCCAAGAGCAACTCTGCCAAAGCATCGGACAATGAGGTTTCCTATACCGAACTATATCCTCGCTAG

Protein Analysis

689

Amino Acids

76.81

Weight (kDa)

7.09

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 38 - 137 1.4e-26 Salt stress response/antifungal
Stress-antifung PF01657 162 - 250 1.5e-13 Salt stress response/antifungal
Pkinase PF00069 358 - 560 1.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 360 - 624 3.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 668
AccBSI CCGCTC 1 cut(s) 411
AciI CCGC 5 cut(s) 237, 409, 540, 1098, 1774
AclWI GGATC 4 cut(s) 1757, 1941, 1954, 1998
AcsI RAATTY 4 cut(s) 1168, 1190, 1234, 1753
AcuI CTGAAG 3 cut(s) 724, 878, 1095
AfaI GTAC 6 cut(s) 148, 380, 462, 618, 625, 1336
AfeI AGCGCT 1 cut(s) 783
AgeI ACCGGT 1 cut(s) 197
AgsI TTSAA 9 cut(s) 327, 496, 766, 876, 980, 1226, 1483, 1752, 1980
AjnI CCWGG 3 cut(s) 483, 589, 988
AleI CACNNNNGTG 1 cut(s) 773
Alw26I GTCTC 3 cut(s) 475, 757, 1904
AlwI GGATC 4 cut(s) 1757, 1941, 1954, 1998
Ama87I CYCGRG 1 cut(s) 1392
Aor51HI AGCGCT 1 cut(s) 783
AoxI GGCC 1 cut(s) 1850
ApeKI GCWGC 3 cut(s) 234, 312, 784
ApoI RAATTY 4 cut(s) 1168, 1190, 1234, 1753
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
AsiGI ACCGGT 1 cut(s) 197
Asp700I GAANNNNTTC 2 cut(s) 1278, 1707
AspLEI GCGC 2 cut(s) 784, 1368
AspS9I GGNCC 1 cut(s) 1563
AsuHPI GGTGA 4 cut(s) 251, 798, 1004, 1996
AvaI CYCGRG 1 cut(s) 1392
AvaII GGWCC 1 cut(s) 1563
BamHI GGATCC 1 cut(s) 1946
BanI GGYRCC 1 cut(s) 668
BarI GAAGNNNNNNTAC 4 cut(s) 856, 888, 1206, 1238
BbvI GCAGC 3 cut(s) 246, 299, 771
BccI CCATC 6 cut(s) 196, 482, 796, 832, 1055, 1648
BceAI ACGGC 2 cut(s) 220, 1761
BciT130I CCWGG 3 cut(s) 485, 591, 990
BclI TGATCA 2 cut(s) 1315, 1528
BcoDI GTCTC 3 cut(s) 475, 757, 1904
BfaI CTAG 4 cut(s) 192, 1211, 1455, 2068
BfmI CTRYAG 1 cut(s) 1627
BfoI RGCGCY 1 cut(s) 785
BglI GCCNNNNNGGC 1 cut(s) 489
BglII AGATCT 1 cut(s) 1705
BisI GCNGC 4 cut(s) 235, 313, 540, 785
BlsI GCNGC 4 cut(s) 236, 314, 541, 786
Bme1390I CCNGG 3 cut(s) 485, 591, 990
Bme18I GGWCC 1 cut(s) 1563
BmeT110I CYCGRG 1 cut(s) 1392
BmgT120I GGNCC 1 cut(s) 1563
BmiI GGNNCC 4 cut(s) 670, 1564, 1581, 1948
BmrFI CCNGG 3 cut(s) 485, 591, 990
BmsI GCATC 7 cut(s) 51, 812, 1462, 1793, 1815, 1871, 2036
BpmI CTGGAG 3 cut(s) 573, 1002, 1566
Bpu10I CCTNAGC 1 cut(s) 506
BpuEI CTTGAG 1 cut(s) 1521
Bsa29I ATCGAT 2 cut(s) 23, 2002
BsaBI GATNNNNATC 1 cut(s) 19
BsaJI CCNNGG 3 cut(s) 774, 988, 1857
BsaWI WCCGGW 2 cut(s) 197, 1230
BsaXI ACNNNNNCTCC 4 cut(s) 321, 351, 1683, 1713
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 2 cut(s) 550, 582
Bse3DI GCAATG 4 cut(s) 658, 1599, 1769, 1945
Bse8I GATNNNNATC 1 cut(s) 19
BseBI CCWGG 3 cut(s) 485, 591, 990
BseCI ATCGAT 2 cut(s) 23, 2002
BseDI CCNNGG 3 cut(s) 774, 988, 1857
BseGI GGATG 4 cut(s) 493, 1806, 1869, 1994
BseJI GATNNNNATC 1 cut(s) 19
BseMI GCAATG 4 cut(s) 658, 1599, 1769, 1945
BseMII CTCAG 4 cut(s) 92, 486, 548, 1909
BseNI ACTGG 2 cut(s) 550, 582
BseRI GAGGAG 2 cut(s) 169, 807
BseXI GCAGC 3 cut(s) 246, 299, 771
BseYI CCCAGC 1 cut(s) 728
Bsh1285I CGRYCG 1 cut(s) 2002
BshFI GGCC 1 cut(s) 1852
BshNI GGYRCC 1 cut(s) 668
BshTI ACCGGT 1 cut(s) 197
BshVI ATCGAT 2 cut(s) 23, 2002
BsiEI CGRYCG 1 cut(s) 2002
BsiHKCI CYCGRG 1 cut(s) 1392
BsiSI CCGG 3 cut(s) 198, 629, 1231
BslFI GGGAC 3 cut(s) 336, 1576, 1756
BsmAI GTCTC 3 cut(s) 475, 757, 1904
BsmBI CGTCTC 1 cut(s) 475
BsmFI GGGAC 3 cut(s) 336, 1576, 1756
BsnI GGCC 1 cut(s) 1852
BsoBI CYCGRG 1 cut(s) 1392
Bsp1407I TGTACA 1 cut(s) 616
Bsp143I GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
Bsp19I CCATGG 1 cut(s) 1857
BspACI CCGC 5 cut(s) 237, 409, 540, 1098, 1774
BspANI GGCC 1 cut(s) 1852
BspCNI CTCAG 4 cut(s) 91, 485, 549, 1908
BspDI ATCGAT 2 cut(s) 23, 2002
BspHI TCATGA 2 cut(s) 154, 1411
BspLI GGNNCC 4 cut(s) 670, 1564, 1581, 1948
BspPI GGATC 4 cut(s) 1757, 1941, 1954, 1998
BspT107I GGYRCC 1 cut(s) 668
BsrBI CCGCTC 1 cut(s) 411
BsrDI GCAATG 4 cut(s) 658, 1599, 1769, 1945
BsrFI RCCGGY 1 cut(s) 197
BsrGI TGTACA 1 cut(s) 616
BsrI ACTGG 2 cut(s) 550, 582
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 3 cut(s) 774, 988, 1857
BssMI GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
BssT1I CCWWGG 1 cut(s) 1857
Bst2UI CCWGG 3 cut(s) 485, 591, 990
Bst4CI ACNGT 8 cut(s) 96, 604, 621, 668, 775, 886, 1334, 1350
Bst6I CTCTTC 2 cut(s) 854, 956
BstAPI GCANNNNNTGC 1 cut(s) 657
BstAUI TGTACA 1 cut(s) 616
BstC8I GCNNGC 2 cut(s) 441, 1829
BstDEI CTNAG 8 cut(s) 78, 472, 506, 557, 661, 1427, 1712, 1895
BstDSI CCRYGG 2 cut(s) 774, 1857
BstF5I GGATG 4 cut(s) 493, 1806, 1869, 1994
BstH2I RGCGCY 1 cut(s) 785
BstHHI GCGC 2 cut(s) 784, 1368
BstKTI GATC 8 cut(s) 1318, 1447, 1531, 1708, 1765, 1949, 2002, 2006
BstMAI GTCTC 3 cut(s) 475, 757, 1904
BstMBI GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
BstMCI CGRYCG 1 cut(s) 2002
BstMWI GCNNNNNNNGC 5 cut(s) 83, 243, 489, 657, 790
BstNI CCWGG 3 cut(s) 485, 591, 990
BstNSI RCATGY 2 cut(s) 335, 1957
BstSCI CCNGG 3 cut(s) 483, 589, 988
BstSFI CTRYAG 1 cut(s) 1627
BstV1I GCAGC 3 cut(s) 246, 299, 771
BstX2I RGATCY 3 cut(s) 1705, 1762, 1946
BstYI RGATCY 3 cut(s) 1705, 1762, 1946
Bsu15I ATCGAT 2 cut(s) 23, 2002
BsuRI GGCC 1 cut(s) 1852
BsuTUI ATCGAT 2 cut(s) 23, 2002
BtgI CCRYGG 2 cut(s) 774, 1857
BtgZI GCGATG 2 cut(s) 300, 774
BtsCI GGATG 4 cut(s) 493, 1806, 1869, 1994
BtsI GCAGTG 1 cut(s) 135
BtsIMutI CAGTG 2 cut(s) 135, 626
Cac8I GCNNGC 2 cut(s) 441, 1829
CciI TCATGA 2 cut(s) 154, 1411
CfoI GCGC 2 cut(s) 784, 1368
Cfr10I RCCGGY 1 cut(s) 197
Cfr13I GGNCC 1 cut(s) 1563
ClaI ATCGAT 2 cut(s) 23, 2002
CseI GACGC 1 cut(s) 465
Csp6I GTAC 6 cut(s) 147, 379, 461, 617, 624, 1335
CspAI ACCGGT 1 cut(s) 197
CviQI GTAC 6 cut(s) 147, 379, 461, 617, 624, 1335
DdeI CTNAG 8 cut(s) 78, 472, 506, 557, 661, 1427, 1712, 1895
DpnI GATC 8 cut(s) 1317, 1446, 1530, 1707, 1764, 1948, 2001, 2005
DpnII GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
DraI TTTAAA 1 cut(s) 1195
Eam1104I CTCTTC 2 cut(s) 854, 956
EarI CTCTTC 2 cut(s) 854, 956
EciI GGCGGA 1 cut(s) 1113
Eco130I CCWWGG 1 cut(s) 1857
Eco47I GGWCC 1 cut(s) 1563
Eco47III AGCGCT 1 cut(s) 783
Eco57I CTGAAG 3 cut(s) 724, 878, 1095
Eco88I CYCGRG 1 cut(s) 1392
EcoO109I RGGNCCY 1 cut(s) 1563
EcoRII CCWGG 3 cut(s) 483, 589, 988
EcoT14I CCWWGG 1 cut(s) 1857
EcoT22I ATGCAT 4 cut(s) 1599, 1723, 1808, 1935
ErhI CCWWGG 1 cut(s) 1857
Esp3I CGTCTC 1 cut(s) 475
FaqI GGGAC 3 cut(s) 336, 1576, 1756
FauNDI CATATG 1 cut(s) 229
FbaI TGATCA 2 cut(s) 1315, 1528
Fnu4HI GCNGC 4 cut(s) 235, 313, 540, 785
FokI GGATG 4 cut(s) 500, 1793, 1856, 1981
Fsp4HI GCNGC 4 cut(s) 235, 313, 540, 785
FspBI CTAG 4 cut(s) 192, 1211, 1455, 2068
GlaI GCGC 2 cut(s) 783, 1367
GluI GCNGC 4 cut(s) 235, 313, 540, 785
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 3 cut(s) 573, 1002, 1566
HaeII RGCGCY 1 cut(s) 785
HaeIII GGCC 1 cut(s) 1852
HapII CCGG 3 cut(s) 198, 629, 1231
HgaI GACGC 1 cut(s) 465
HhaI GCGC 2 cut(s) 784, 1368
Hin6I GCGC 2 cut(s) 782, 1366
HinP1I GCGC 2 cut(s) 782, 1366
HindIII AAGCTT 1 cut(s) 1220
HinfI GANTC 7 cut(s) 323, 682, 1022, 1398, 1418, 1431, 1483
HpaII CCGG 3 cut(s) 198, 629, 1231
HphI GGTGA 4 cut(s) 251, 798, 1004, 1996
Hpy166II GTNNAC 5 cut(s) 262, 624, 1114, 1346, 1664
Hpy188III TCNNGA 9 cut(s) 12, 155, 1019, 1313, 1412, 1442, 1465, 1583, 1785
Hpy8I GTNNAC 5 cut(s) 262, 624, 1114, 1346, 1664
HpyAV CCTTC 4 cut(s) 182, 194, 355, 1733
HpyCH4III ACNGT 8 cut(s) 96, 604, 621, 668, 775, 886, 1334, 1350
HpyCH4IV ACGT 3 cut(s) 459, 468, 942
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 243, 489, 657, 790
HpyF3I CTNAG 8 cut(s) 78, 472, 506, 557, 661, 1427, 1712, 1895
HpySE526I ACGT 3 cut(s) 459, 468, 942
HspAI GCGC 2 cut(s) 782, 1366
Ksp22I TGATCA 2 cut(s) 1315, 1528
Kzo9I GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
LmnI GCTCC 2 cut(s) 416, 1585
Lsp1109I GCAGC 3 cut(s) 246, 299, 771
LweI GCATC 7 cut(s) 51, 812, 1462, 1793, 1815, 1871, 2036
MaeI CTAG 4 cut(s) 192, 1211, 1455, 2068
MaeII ACGT 3 cut(s) 459, 468, 942
MaeIII GTNAC 4 cut(s) 45, 200, 734, 1984
MalI GATC 8 cut(s) 1317, 1446, 1530, 1707, 1764, 1948, 2001, 2005
MbiI CCGCTC 1 cut(s) 411
MboI GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
MboII GAAGA 9 cut(s) 715, 864, 871, 973, 1007, 1151, 1400, 1700, 1715
MflI RGATCY 3 cut(s) 1705, 1762, 1946
MlyI GAGTC 2 cut(s) 1392, 1412
MmeI TCCRAC 6 cut(s) 710, 1532, 1712, 1790, 1924, 1974
Mph1103I ATGCAT 4 cut(s) 1599, 1723, 1808, 1935
MroXI GAANNNNTTC 2 cut(s) 1278, 1707
MseI TTAA 5 cut(s) 950, 1194, 1614, 1757, 1881
MslI CAYNNNNRTG 3 cut(s) 773, 1874, 1938
MspA1I CMGCKG 2 cut(s) 237, 732
MspI CCGG 3 cut(s) 198, 629, 1231
MspR9I CCNGG 3 cut(s) 485, 591, 990
MvaI CCWGG 3 cut(s) 485, 591, 990
MwoI GCNNNNNNNGC 5 cut(s) 83, 243, 489, 657, 790
NcoI CCATGG 1 cut(s) 1857
NdeI CATATG 1 cut(s) 229
NdeII GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
NlaIV GGNNCC 4 cut(s) 670, 1564, 1581, 1948
NmuCI GTSAC 1 cut(s) 1984
NsiI ATGCAT 4 cut(s) 1599, 1723, 1808, 1935
NspI RCATGY 2 cut(s) 335, 1957
OliI CACNNNNGTG 1 cut(s) 773
PaeR7I CTCGAG 1 cut(s) 1392
PagI TCATGA 2 cut(s) 154, 1411
PcsI WCGNNNNNNNCGW 1 cut(s) 465
PdmI GAANNNNTTC 2 cut(s) 1278, 1707
PfeI GAWTC 5 cut(s) 323, 682, 1022, 1431, 1483
PinAI ACCGGT 1 cut(s) 197
PkrI GCNGC 4 cut(s) 236, 314, 541, 786
Ple19I CGATCG 1 cut(s) 2002
PleI GAGTC 2 cut(s) 1392, 1412
PpsI GAGTC 2 cut(s) 1392, 1412
PpuMI RGGWCCY 1 cut(s) 1563
PsiI TTATAA 1 cut(s) 599
Psp5II RGGWCCY 1 cut(s) 1563
Psp6I CCWGG 3 cut(s) 483, 589, 988
PspFI CCCAGC 1 cut(s) 728
PspGI CCWGG 3 cut(s) 483, 589, 988
PspN4I GGNNCC 4 cut(s) 670, 1564, 1581, 1948
PspPI GGNCC 1 cut(s) 1563
PspPPI RGGWCCY 1 cut(s) 1563
PspXI VCTCGAGB 1 cut(s) 1392
PsuI RGATCY 3 cut(s) 1705, 1762, 1946
PvuI CGATCG 1 cut(s) 2002
PvuII CAGCTG 1 cut(s) 732
RsaI GTAC 6 cut(s) 148, 380, 462, 618, 625, 1336
RsaNI GTAC 6 cut(s) 147, 379, 461, 617, 624, 1335
RseI CAYNNNNRTG 3 cut(s) 773, 1874, 1938
SaqAI TTAA 5 cut(s) 950, 1194, 1614, 1757, 1881
SatI GCNGC 4 cut(s) 235, 313, 540, 785
Sau3AI GATC 8 cut(s) 1315, 1444, 1528, 1705, 1762, 1946, 1999, 2003
Sau96I GGNCC 1 cut(s) 1563
SchI GAGTC 2 cut(s) 1392, 1412
ScrFI CCNGG 3 cut(s) 485, 591, 990
SfaNI GCATC 7 cut(s) 51, 812, 1462, 1793, 1815, 1871, 2036
SfcI CTRYAG 1 cut(s) 1627
Sfr274I CTCGAG 1 cut(s) 1392
SinI GGWCC 1 cut(s) 1563
SlaI CTCGAG 1 cut(s) 1392
SmiMI CAYNNNNRTG 3 cut(s) 773, 1874, 1938
SmlI CTYRAG 3 cut(s) 10, 1392, 1536
SmoI CTYRAG 3 cut(s) 10, 1392, 1536
SsiI CCGC 5 cut(s) 237, 409, 540, 1098, 1774
SspMI CTAG 4 cut(s) 192, 1211, 1455, 2068
StyD4I CCNGG 3 cut(s) 483, 589, 988
StyI CCWWGG 1 cut(s) 1857
TaaI ACNGT 8 cut(s) 96, 604, 621, 668, 775, 886, 1334, 1350
TaiI ACGT 3 cut(s) 462, 471, 945
TaqI TCGA 5 cut(s) 23, 880, 1393, 1784, 2002
TatI WGTACW 2 cut(s) 146, 616
TauI GCSGC 1 cut(s) 542
TfiI GAWTC 5 cut(s) 323, 682, 1022, 1431, 1483
Tru1I TTAA 5 cut(s) 950, 1194, 1614, 1757, 1881
Tru9I TTAA 5 cut(s) 950, 1194, 1614, 1757, 1881
TscAI CASTG 2 cut(s) 142, 626
TseFI GTSAC 1 cut(s) 1984
TseI GCWGC 3 cut(s) 234, 312, 784
Tsp45I GTSAC 1 cut(s) 1984
TspDTI ATGAA 7 cut(s) 171, 762, 1020, 1215, 1400, 1918, 1983
TspRI CASTG 2 cut(s) 142, 626
VpaK11BI GGWCC 1 cut(s) 1563
XapI RAATTY 4 cut(s) 1168, 1190, 1234, 1753
XceI RCATGY 2 cut(s) 335, 1957
XhoI CTCGAG 1 cut(s) 1392
XmnI GAANNNNTTC 2 cut(s) 1278, 1707
XspI CTAG 4 cut(s) 192, 1211, 1455, 2068
Zsp2I ATGCAT 4 cut(s) 1599, 1723, 1808, 1935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.