Rroxscaffold_1G00071410

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000086
Physical Location & Seq
Reverse (-)
92243569 .. 92245709
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00071410.1

Sequence Viewer

Length: 1392 bp
ATGAGTTCCTCAAGATTGCTTTTCTTCATGCTAATTCCTATTATCTTGGACCTTGTTGCTCCTGCCACAGCCCAAATTGATGACGGTGTAACTACTTTCACAGCTGATTTCTGCTGGAGATGTTCCAGCATTGGCACCTACACTGATGGCAGCATCTACCAAGAAAACCTCAACAACCTCCTGTCAAACTTCTCTTCCAACACCCAAATCAATTACGGGTTTTACAATTCTTCCATGGGACAGGACTCCAACAAGGTTAATGCAATTGCATTGTGTAGAGGAGATATCGCACTGGACATATGCCACATTTGTGTCAAGGACTCAAGGAGGCCAGTCAACTTCTCTTCCAGAATTGCTCACATCAAAAGGAAGCGATCCTATGGGCTCAGCCTTGAAGATGAACGTATCAAGTATGTCCCTAGCCCTACCGCTGCAGCGAACATAGAACAGTTTACACCACTGCTAAATTCCTTGTTGGATACCTTAAGGGAGAAAGTGGCATCAGGGGACTCTCTCAAAAAATATTCAGCAGGACATACCACTCTCCAAGTTGTTCCAAAATATCAAGCAATATATGGACTTGTTCAGTGCACTCCGGATATGGACAAGGACAATTGCCGCAATTGCCTACAAGATGCTATCTCAAATATTCCAACATATTGTGGTGGAAAGCAAGGAGGCAGAGTTCTTAAACCCAGCTGCAGTGTAAGGTTTGAGGCCACTCTTTTGTACGAGTCTACAGCCGATTCGGAAGTAAGTCTTCCACCAAAAAAAGCATGTGCTAATCAATTTGATAATTTTCAGATGATAATTCCGGTGAAATTAGTTAGGCAGATTCATTGCAATATGACTTTGAAACTATTAGAGATGCAACAGATGACTTCTCTGATGAAAATAAGCGGTAGATTTGGAGTTGTTTATAAGGGTCGTCTAGCTAATGGACAATATATAGCTGTCAAAAGACTCTCAAAGAATTCTGAACAGGGTGACCGAGAGTTCAAAAACGAGGTCGCATTAGTTGCTCAACTTCAACATGTGAATTTAGTAAGGCTCCTGGGATTTTGCTTGAAAATGAAGGAAAGGATCCTAATTTACGAATACCAAGAGAAAAAAAGAGAGAAATTTTACAAAGGTCATATTCATTTCAATATAGATCCAATCAATCATGGGCATTTGGATTGGGACACACGTTACAAAATCATTGGAGGCATTGCTCGAGGGATTCTCTACCTCCATGAAGATTCTCGACTTCGAATTATCCATCGTGACCTTAAACCCAGCAATATTTTATTAGATGGAGATATGAATCCTAAAATTGCAGATTTTGGCATGGCAAGATTATTTCTGATGGATCAAACTCATGGACACACAAACAGAGTCGCAGGGACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

463

Amino Acids

52.31

Weight (kDa)

9.07

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 40 - 110 8.3e-15 Salt stress response/antifungal
Stress-antifung PF01657 148 - 240 6.7e-13 Salt stress response/antifungal
Pkinase PF00069 300 - 453 2.3e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 300 - 453 7.9e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 921
AccB1I GGYRCC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 737
AccIII TCCGGA 1 cut(s) 595
AciI CCGC 3 cut(s) 429, 619, 900
AclWI GGATC 5 cut(s) 369, 1078, 1091, 1148, 1359
AcsI RAATTY 4 cut(s) 466, 973, 1039, 1121
AfaI GTAC 1 cut(s) 731
AflII CTTAAG 1 cut(s) 484
AflIII ACRYGT 2 cut(s) 1033, 1187
AgsI TTSAA 6 cut(s) 395, 856, 1000, 1031, 1069, 1147
AjnI CCWGG 1 cut(s) 1053
AleI CACNNNNGTG 1 cut(s) 309
AloI GAACNNNNNNTCC 2 cut(s) 669, 701
AluBI AGCT 4 cut(s) 104, 699, 935, 953
AluI AGCT 4 cut(s) 104, 699, 935, 953
Alw21I GWGCWC 1 cut(s) 593
Alw44I GTGCAC 1 cut(s) 589
AlwI GGATC 5 cut(s) 369, 1078, 1091, 1148, 1359
Ama87I CYCGRG 1 cut(s) 1215
Aor13HI TCCGGA 1 cut(s) 595
AoxI GGCC 2 cut(s) 329, 717
ApaLI GTGCAC 1 cut(s) 589
ApeKI GCWGC 4 cut(s) 150, 431, 434, 699
ApoI RAATTY 4 cut(s) 466, 973, 1039, 1121
ArsI GACNNNNNNTTYG 2 cut(s) 993, 1025
AspS9I GGNCC 2 cut(s) 49, 1386
AsuHPI GGTGA 2 cut(s) 829, 998
AsuII TTCGAA 1 cut(s) 1252
AvaI CYCGRG 1 cut(s) 1215
AvaII GGWCC 2 cut(s) 49, 1386
BaeGI GKGCMC 1 cut(s) 593
BamHI GGATCC 1 cut(s) 1083
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 1 cut(s) 387
BbsI GAAGAC 1 cut(s) 752
Bbv12I GWGCWC 1 cut(s) 593
BbvI GCAGC 4 cut(s) 162, 418, 446, 686
BccI CCATC 4 cut(s) 140, 1269, 1289, 1342
BciT130I CCWGG 1 cut(s) 1055
BciVI GTATCC 1 cut(s) 472
BfaI CTAG 3 cut(s) 420, 932, 1390
BfmI CTRYAG 3 cut(s) 432, 700, 738
BfrI CTTAAG 1 cut(s) 484
BfuI GTATCC 1 cut(s) 472
BisI GCNGC 5 cut(s) 151, 432, 435, 619, 700
BlpI GCTNAGC 1 cut(s) 386
BlsI GCNGC 5 cut(s) 152, 433, 436, 620, 701
Bme1390I CCNGG 1 cut(s) 1055
Bme18I GGWCC 2 cut(s) 49, 1386
BmeT110I CYCGRG 1 cut(s) 1215
BmgT120I GGNCC 2 cut(s) 49, 1386
BmiI GGNNCC 4 cut(s) 136, 1052, 1085, 1387
BmrFI CCNGG 1 cut(s) 1055
BmsI GCATC 4 cut(s) 162, 509, 625, 858
BpiI GAAGAC 1 cut(s) 752
BplI GAGNNNNNCTC 2 cut(s) 1209, 1241
BpmI CTGGAG 1 cut(s) 136
Bpu1102I GCTNAGC 1 cut(s) 386
Bpu14I TTCGAA 1 cut(s) 1252
BpuEI CTTGAG 1 cut(s) 307
BsaBI GATNNNNATC 1 cut(s) 1305
BsaJI CCNNGG 2 cut(s) 234, 1054
BsaWI WCCGGW 2 cut(s) 595, 814
BsaXI ACNNNNNCTCC 2 cut(s) 669, 699
Bse1I ACTGG 2 cut(s) 297, 332
Bse3DI GCAATG 2 cut(s) 838, 1209
Bse8I GATNNNNATC 1 cut(s) 1305
BseAI TCCGGA 1 cut(s) 595
BseBI CCWGG 1 cut(s) 1055
BseDI CCNNGG 2 cut(s) 234, 1054
BseJI GATNNNNATC 1 cut(s) 1305
BseMI GCAATG 2 cut(s) 838, 1209
BseMII CTCAG 1 cut(s) 400
BseNI ACTGG 2 cut(s) 297, 332
BseRI GAGGAG 1 cut(s) 294
BseSI GKGCMC 1 cut(s) 593
BseXI GCAGC 4 cut(s) 162, 418, 446, 686
BseYI CCCAGC 2 cut(s) 695, 1277
BshFI GGCC 2 cut(s) 331, 719
BshNI GGYRCC 1 cut(s) 134
BsiHKAI GWGCWC 1 cut(s) 593
BsiHKCI CYCGRG 1 cut(s) 1215
BsiSI CCGG 2 cut(s) 596, 815
BslFI GGGAC 4 cut(s) 252, 401, 521, 1196
BsmFI GGGAC 4 cut(s) 252, 401, 521, 1196
BsnI GGCC 2 cut(s) 331, 719
BsoBI CYCGRG 1 cut(s) 1215
Bsp119I TTCGAA 1 cut(s) 1252
Bsp1286I GDGCHC 2 cut(s) 387, 593
Bsp13I TCCGGA 1 cut(s) 595
Bsp143I GATC 4 cut(s) 374, 1083, 1153, 1351
Bsp1720I GCTNAGC 1 cut(s) 386
Bsp19I CCATGG 1 cut(s) 234
BspACI CCGC 3 cut(s) 429, 619, 900
BspANI GGCC 2 cut(s) 331, 719
BspCNI CTCAG 1 cut(s) 399
BspEI TCCGGA 1 cut(s) 595
BspLI GGNNCC 4 cut(s) 136, 1052, 1085, 1387
BspMAI CTGCAG 2 cut(s) 436, 704
BspPI GGATC 5 cut(s) 369, 1078, 1091, 1148, 1359
BspT104I TTCGAA 1 cut(s) 1252
BspT107I GGYRCC 1 cut(s) 134
BspTI CTTAAG 1 cut(s) 484
BsrDI GCAATG 2 cut(s) 838, 1209
BsrI ACTGG 2 cut(s) 297, 332
BssECI CCNNGG 2 cut(s) 234, 1054
BssMI GATC 4 cut(s) 374, 1083, 1153, 1351
BssT1I CCWWGG 1 cut(s) 234
Bst2UI CCWGG 1 cut(s) 1055
Bst4CI ACNGT 2 cut(s) 86, 450
Bst6I CTCTTC 2 cut(s) 199, 349
BstAFI CTTAAG 1 cut(s) 484
BstAPI GCANNNNNTGC 1 cut(s) 1019
BstBI TTCGAA 1 cut(s) 1252
BstDEI CTNAG 1 cut(s) 386
BstDSI CCRYGG 1 cut(s) 234
BstEII GGTNACC 1 cut(s) 986
BstKTI GATC 4 cut(s) 377, 1086, 1156, 1354
BstMBI GATC 4 cut(s) 374, 1083, 1153, 1351
BstMWI GCNNNNNNNGC 2 cut(s) 624, 1019
BstNI CCWGG 1 cut(s) 1055
BstNSI RCATGY 2 cut(s) 780, 1037
BstPI GGTNACC 1 cut(s) 986
BstSCI CCNGG 1 cut(s) 1053
BstSFI CTRYAG 3 cut(s) 432, 700, 738
BstSLI GKGCMC 1 cut(s) 593
BstV1I GCAGC 4 cut(s) 162, 418, 446, 686
BstV2I GAAGAC 1 cut(s) 752
BstX2I RGATCY 2 cut(s) 1083, 1153
BstYI RGATCY 2 cut(s) 1083, 1153
BsuI GTATCC 1 cut(s) 472
BsuRI GGCC 2 cut(s) 331, 719
BtgI CCRYGG 1 cut(s) 234
BtsI GCAGTG 2 cut(s) 458, 709
BtsIMutI CAGTG 5 cut(s) 141, 290, 458, 593, 709
Cfr13I GGNCC 2 cut(s) 49, 1386
Csp6I GTAC 1 cut(s) 730
CviAII CATG 8 cut(s) 28, 235, 777, 1034, 1166, 1235, 1330, 1361
CviQI GTAC 1 cut(s) 730
DdeI CTNAG 1 cut(s) 386
DpnI GATC 4 cut(s) 376, 1085, 1155, 1353
DpnII GATC 4 cut(s) 374, 1083, 1153, 1351
Eam1104I CTCTTC 2 cut(s) 199, 349
EarI CTCTTC 2 cut(s) 199, 349
Eco130I CCWWGG 1 cut(s) 234
Eco24I GRGCYC 1 cut(s) 387
Eco32I GATATC 1 cut(s) 286
Eco47I GGWCC 2 cut(s) 49, 1386
Eco88I CYCGRG 1 cut(s) 1215
Eco91I GGTNACC 1 cut(s) 986
EcoO109I RGGNCCY 1 cut(s) 1386
EcoO65I GGTNACC 1 cut(s) 986
EcoRI GAATTC 1 cut(s) 973
EcoRII CCWGG 1 cut(s) 1053
EcoRV GATATC 1 cut(s) 286
EcoT14I CCWWGG 1 cut(s) 234
EcoT38I GRGCYC 1 cut(s) 387
ErhI CCWWGG 1 cut(s) 234
FaeI CATG 8 cut(s) 31, 238, 780, 1037, 1169, 1238, 1333, 1364
FalI AAGNNNNNCTT 2 cut(s) 744, 776
FaqI GGGAC 4 cut(s) 252, 401, 521, 1196
FatI CATG 8 cut(s) 27, 234, 776, 1033, 1165, 1234, 1329, 1360
FauNDI CATATG 1 cut(s) 299
FblI GTMKAC 1 cut(s) 737
Fnu4HI GCNGC 5 cut(s) 151, 432, 435, 619, 700
FriOI GRGCYC 1 cut(s) 387
Fsp4HI GCNGC 5 cut(s) 151, 432, 435, 619, 700
FspBI CTAG 3 cut(s) 420, 932, 1390
GluI GCNGC 5 cut(s) 151, 432, 435, 619, 700
GsaI CCCAGC 2 cut(s) 699, 1281
GsuI CTGGAG 1 cut(s) 136
HaeIII GGCC 2 cut(s) 331, 719
HapII CCGG 2 cut(s) 596, 815
Hin1II CATG 8 cut(s) 31, 238, 780, 1037, 1169, 1238, 1333, 1364
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HpaII CCGG 2 cut(s) 596, 815
HphI GGTGA 2 cut(s) 829, 998
Hpy166II GTNNAC 4 cut(s) 337, 453, 591, 738
Hpy188I TCNGA 5 cut(s) 751, 804, 888, 979, 1347
Hpy188III TCNNGA 5 cut(s) 12, 348, 596, 1245, 1265
Hpy8I GTNNAC 4 cut(s) 337, 453, 591, 738
HpyAV CCTTC 1 cut(s) 1069
HpyCH4III ACNGT 2 cut(s) 86, 450
HpyCH4IV ACGT 2 cut(s) 403, 1189
HpyCH4V TGCA 8 cut(s) 263, 269, 434, 591, 702, 843, 871, 1319
HpyF10VI GCNNNNNNNGC 2 cut(s) 624, 1019
HpyF3I CTNAG 1 cut(s) 386
HpySE526I ACGT 2 cut(s) 403, 1189
Hsp92II CATG 8 cut(s) 31, 238, 780, 1037, 1169, 1238, 1333, 1364
Kpn2I TCCGGA 1 cut(s) 595
Kzo9I GATC 4 cut(s) 374, 1083, 1153, 1351
LmnI GCTCC 2 cut(s) 64, 1056
Lsp1109I GCAGC 4 cut(s) 162, 418, 446, 686
LweI GCATC 4 cut(s) 162, 509, 625, 858
MaeI CTAG 3 cut(s) 420, 932, 1390
MaeII ACGT 2 cut(s) 403, 1189
MaeIII GTNAC 4 cut(s) 88, 986, 1190, 1265
MalI GATC 4 cut(s) 376, 1085, 1155, 1353
MboI GATC 4 cut(s) 374, 1083, 1153, 1351
MboII GAAGA 7 cut(s) 16, 186, 222, 336, 407, 752, 1250
MfeI CAATTG 3 cut(s) 264, 613, 622
MflI RGATCY 2 cut(s) 1083, 1153
MhlI GDGCHC 2 cut(s) 387, 593
MlyI GAGTC 6 cut(s) 239, 314, 503, 743, 957, 1386
MmeI TCCRAC 4 cut(s) 222, 273, 456, 677
MroI TCCGGA 1 cut(s) 595
MseI TTAA 4 cut(s) 258, 485, 690, 1272
MslI CAYNNNNRTG 1 cut(s) 309
MspA1I CMGCKG 3 cut(s) 104, 431, 699
MspCI CTTAAG 1 cut(s) 484
MspI CCGG 2 cut(s) 596, 815
MspR9I CCNGG 1 cut(s) 1055
MunI CAATTG 3 cut(s) 264, 613, 622
MvaI CCWGG 1 cut(s) 1055
MwoI GCNNNNNNNGC 2 cut(s) 624, 1019
NcoI CCATGG 1 cut(s) 234
NdeI CATATG 1 cut(s) 299
NdeII GATC 4 cut(s) 374, 1083, 1153, 1351
NlaIII CATG 8 cut(s) 31, 238, 780, 1037, 1169, 1238, 1333, 1364
NlaIV GGNNCC 4 cut(s) 136, 1052, 1085, 1387
NmuCI GTSAC 2 cut(s) 986, 1265
NspI RCATGY 2 cut(s) 780, 1037
NspV TTCGAA 1 cut(s) 1252
OliI CACNNNNGTG 1 cut(s) 309
PaeR7I CTCGAG 1 cut(s) 1215
PciI ACATGT 1 cut(s) 1033
PfeI GAWTC 5 cut(s) 746, 835, 1222, 1241, 1306
PkrI GCNGC 5 cut(s) 152, 433, 436, 620, 701
PleI GAGTC 6 cut(s) 239, 314, 503, 742, 957, 1385
PpsI GAGTC 6 cut(s) 239, 314, 503, 742, 957, 1385
PpuMI RGGWCCY 1 cut(s) 1386
PscI ACATGT 1 cut(s) 1033
PsiI TTATAA 1 cut(s) 921
Psp5II RGGWCCY 1 cut(s) 1386
Psp6I CCWGG 1 cut(s) 1053
PspEI GGTNACC 1 cut(s) 986
PspFI CCCAGC 2 cut(s) 695, 1277
PspGI CCWGG 1 cut(s) 1053
PspN4I GGNNCC 4 cut(s) 136, 1052, 1085, 1387
PspPI GGNCC 2 cut(s) 49, 1386
PspPPI RGGWCCY 1 cut(s) 1386
PspXI VCTCGAGB 1 cut(s) 1215
PstI CTGCAG 2 cut(s) 436, 704
PsuI RGATCY 2 cut(s) 1083, 1153
PvuII CAGCTG 2 cut(s) 104, 699
RsaI GTAC 1 cut(s) 731
RsaNI GTAC 1 cut(s) 730
RseI CAYNNNNRTG 1 cut(s) 309
SaqAI TTAA 4 cut(s) 258, 485, 690, 1272
SatI GCNGC 5 cut(s) 151, 432, 435, 619, 700
Sau3AI GATC 4 cut(s) 374, 1083, 1153, 1351
Sau96I GGNCC 2 cut(s) 49, 1386
SchI GAGTC 6 cut(s) 239, 314, 503, 743, 957, 1386
ScrFI CCNGG 1 cut(s) 1055
SduI GDGCHC 2 cut(s) 387, 593
SfaNI GCATC 4 cut(s) 162, 509, 625, 858
SfcI CTRYAG 3 cut(s) 432, 700, 738
Sfr274I CTCGAG 1 cut(s) 1215
SfuI TTCGAA 1 cut(s) 1252
SinI GGWCC 2 cut(s) 49, 1386
SlaI CTCGAG 1 cut(s) 1215
SmiMI CAYNNNNRTG 1 cut(s) 309
SmlI CTYRAG 4 cut(s) 10, 322, 484, 1215
SmoI CTYRAG 4 cut(s) 10, 322, 484, 1215
SsiI CCGC 3 cut(s) 429, 619, 900
SspI AATATT 3 cut(s) 524, 649, 1285
SspMI CTAG 3 cut(s) 420, 932, 1390
StyD4I CCNGG 1 cut(s) 1053
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 2 cut(s) 86, 450
TaiI ACGT 2 cut(s) 406, 1192
TaqI TCGA 3 cut(s) 1216, 1246, 1252
TaqII GACCGA 1 cut(s) 1005
TauI GCSGC 1 cut(s) 621
TfiI GAWTC 5 cut(s) 746, 835, 1222, 1241, 1306
Tru1I TTAA 4 cut(s) 258, 485, 690, 1272
Tru9I TTAA 4 cut(s) 258, 485, 690, 1272
TscAI CASTG 5 cut(s) 148, 297, 465, 593, 709
TseFI GTSAC 2 cut(s) 986, 1265
TseI GCWGC 4 cut(s) 150, 431, 434, 699
Tsp45I GTSAC 2 cut(s) 986, 1265
TspDTI ATGAA 8 cut(s) 16, 414, 827, 905, 1088, 1130, 1251, 1319
TspRI CASTG 5 cut(s) 148, 297, 465, 593, 709
Vha464I CTTAAG 1 cut(s) 484
VneI GTGCAC 1 cut(s) 589
VpaK11BI GGWCC 2 cut(s) 49, 1386
XapI RAATTY 4 cut(s) 466, 973, 1039, 1121
XceI RCATGY 2 cut(s) 780, 1037
XhoI CTCGAG 1 cut(s) 1215
XmiI GTMKAC 1 cut(s) 737
XspI CTAG 3 cut(s) 420, 932, 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.