Rroxscaffold_7G00169190

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
9884330 .. 9891157
6828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169190.1

Sequence Viewer

Length: 903 bp
ATGGTTTTCTCAAAATTTGGATTCTTTCTTTGTATGCTGCAACTACTTATGTTAGTTCTTACTGCCGAAGCCCTTGTTCCACAGGTACTTCTGTCCATCAATTGTCTGGGTAGTAACTCCACCGATAACAGTACTTTCCTGAGAAACCTCAATACCCTTCTCCCTACTCTACCCTCTGCAGGCAACGGCTATGGTTTTTACAACTCCTCTCTCGGTGAAAATGAAGATAAAGTCTATGCAGTTGCACTCTGCAGACCATTTGTTGAGCCGGATGCCTGTGTGGATTGCCTCAGTTTCGCTAGGAACAAGACCAAGCTGGCATGCCCTCTTCAGAGGGAGGCTACTGCTTGGTACGACAATTGCACTTTACACTACTCAGACAAGTCCATCTACGGCATCATAAAAACTATTCCTTCTTACAGTAGATGGAACGTACAAAACGTATCAACTCCAGATGTGGATGGGTTCTACAACCAGTTCATAGCCTTGATGGAAAGACTAAGTGGTCAAGCTGCGGCGAATGGTCCTCTTCTCAAGTGTGCAGTGGGAAATTTAACCCCTCCAGGTATGTATCAAACAATATATACCTTCCTGCAGTGCACTCCAGATCTGGCTCTGGAGGACTGCAGTGATTGCCTAACAACAGCTCGGTCAGATGTCAGAAATTATTTCTTCGCAAAAAAAATTGCGGTGATCATTTACCCCAGCTGCACCATAAGAGTTCAGGATTCTGTATTCTATGAACCTGCAAGTATTGAGGCACTATTACTATCAGCGAATGGTACAGCTTCAGGTAATACTACTACAACTTCAGTAAACCCTGCTGCAGCTCCGGAGGAAGTCCAAGTAATAATACTACAACTTCAGGAGGAAAGAAGCAGAGTAATAAAGCTCGGACTATAA

Protein Analysis

300

Amino Acids

32.92

Weight (kDa)

5.01

Isoelectric Point (pI)

50.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 38 - 127 1e-21 Salt stress response/antifungal
Stress-antifung PF01657 156 - 243 6.1e-08 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 504
Acc36I ACCTGC 1 cut(s) 754
AccIII TCCGGA 1 cut(s) 832
AciI CCGC 2 cut(s) 515, 689
AcsI RAATTY 2 cut(s) 14, 550
AcuI CTGAAG 4 cut(s) 314, 774, 795, 848
AfaI GTAC 5 cut(s) 87, 133, 353, 435, 784
AfiI CCNNNNNNNGG 1 cut(s) 179
AjnI CCWGG 1 cut(s) 562
AluBI AGCT 7 cut(s) 316, 512, 647, 708, 788, 830, 892
AluI AGCT 7 cut(s) 316, 512, 647, 708, 788, 830, 892
Alw21I GWGCWC 1 cut(s) 602
Alw44I GTGCAC 1 cut(s) 598
Aor13HI TCCGGA 1 cut(s) 832
ApaLI GTGCAC 1 cut(s) 598
ApeKI GCWGC 5 cut(s) 37, 512, 708, 824, 827
ApoI RAATTY 2 cut(s) 14, 550
AspS9I GGNCC 1 cut(s) 524
AsuHPI GGTGA 2 cut(s) 227, 703
AvaII GGWCC 1 cut(s) 524
BaeGI GKGCMC 1 cut(s) 602
BaeI ACNNNNGTAYC 2 cut(s) 77, 110
Bbv12I GWGCWC 1 cut(s) 602
BbvI GCAGC 5 cut(s) 24, 499, 695, 811, 839
BccI CCATC 5 cut(s) 104, 395, 420, 455, 484
BceAI ACGGC 2 cut(s) 202, 409
BciT130I CCWGG 1 cut(s) 564
BclI TGATCA 1 cut(s) 693
BfaI CTAG 1 cut(s) 300
BfmI CTRYAG 5 cut(s) 177, 250, 593, 625, 825
BfuAI ACCTGC 1 cut(s) 754
BglII AGATCT 1 cut(s) 607
BisI GCNGC 6 cut(s) 38, 513, 516, 709, 825, 828
BlsI GCNGC 6 cut(s) 39, 514, 517, 710, 826, 829
BmcAI AGTACT 1 cut(s) 133
Bme1390I CCNGG 1 cut(s) 564
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 1 cut(s) 524
BmrFI CCNGG 1 cut(s) 564
BmsI GCATC 2 cut(s) 262, 405
BpmI CTGGAG 4 cut(s) 435, 546, 588, 638
BpuEI CTTGAG 1 cut(s) 518
BsaWI WCCGGW 1 cut(s) 832
Bsc4I CCNNNNNNNGG 1 cut(s) 179
Bse1I ACTGG 1 cut(s) 475
BseAI TCCGGA 1 cut(s) 832
BseBI CCWGG 1 cut(s) 564
BseGI GGATG 2 cut(s) 277, 466
BseLI CCNNNNNNNGG 1 cut(s) 179
BseMII CTCAG 3 cut(s) 131, 304, 390
BseNI ACTGG 1 cut(s) 475
BseRI GAGGAG 1 cut(s) 196
BseSI GKGCMC 1 cut(s) 602
BseXI GCAGC 5 cut(s) 24, 499, 695, 811, 839
BseYI CCCAGC 1 cut(s) 704
BsgI GTGCAG 2 cut(s) 561, 694
BsiHKAI GWGCWC 1 cut(s) 602
BsiSI CCGG 2 cut(s) 269, 833
BslI CCNNNNNNNGG 1 cut(s) 179
Bsp1286I GDGCHC 1 cut(s) 602
Bsp13I TCCGGA 1 cut(s) 832
Bsp143I GATC 2 cut(s) 607, 693
BspACI CCGC 2 cut(s) 515, 689
BspCNI CTCAG 3 cut(s) 132, 303, 389
BspEI TCCGGA 1 cut(s) 832
BspMAI CTGCAG 5 cut(s) 181, 254, 597, 629, 829
BspMI ACCTGC 1 cut(s) 754
BsrI ACTGG 1 cut(s) 475
BssMI GATC 2 cut(s) 607, 693
Bst2UI CCWGG 1 cut(s) 564
Bst4CI ACNGT 2 cut(s) 131, 422
Bst6I CTCTTC 2 cut(s) 333, 534
BstAPI GCANNNNNTGC 1 cut(s) 633
BstC8I GCNNGC 3 cut(s) 181, 318, 322
BstDEI CTNAG 4 cut(s) 140, 290, 376, 500
BstF5I GGATG 2 cut(s) 277, 466
BstKTI GATC 2 cut(s) 610, 696
BstMBI GATC 2 cut(s) 607, 693
BstMWI GCNNNNNNNGC 1 cut(s) 633
BstNI CCWGG 1 cut(s) 564
BstNSI RCATGY 1 cut(s) 324
BstSCI CCNGG 1 cut(s) 562
BstSFI CTRYAG 5 cut(s) 177, 250, 593, 625, 825
BstSLI GKGCMC 1 cut(s) 602
BstV1I GCAGC 5 cut(s) 24, 499, 695, 811, 839
BstX2I RGATCY 1 cut(s) 607
BstYI RGATCY 1 cut(s) 607
BtsCI GGATG 2 cut(s) 277, 466
BtsI GCAGTG 3 cut(s) 549, 602, 634
BtsIMutI CAGTG 3 cut(s) 549, 602, 634
BveI ACCTGC 1 cut(s) 754
Cac8I GCNNGC 3 cut(s) 181, 318, 322
Cfr13I GGNCC 1 cut(s) 524
Csp6I GTAC 5 cut(s) 86, 132, 352, 434, 783
CviAII CATG 1 cut(s) 321
CviQI GTAC 5 cut(s) 86, 132, 352, 434, 783
DdeI CTNAG 4 cut(s) 140, 290, 376, 500
DpnI GATC 2 cut(s) 609, 695
DpnII GATC 2 cut(s) 607, 693
DrdI GACNNNNNNGTC 1 cut(s) 504
DseDI GACNNNNNNGTC 1 cut(s) 504
Eam1104I CTCTTC 2 cut(s) 333, 534
EarI CTCTTC 2 cut(s) 333, 534
Eco47I GGWCC 1 cut(s) 524
Eco57I CTGAAG 4 cut(s) 314, 774, 795, 848
EcoRII CCWGG 1 cut(s) 562
FaeI CATG 1 cut(s) 324
FatI CATG 1 cut(s) 320
FbaI TGATCA 1 cut(s) 693
Fnu4HI GCNGC 6 cut(s) 38, 513, 516, 709, 825, 828
FokI GGATG 2 cut(s) 284, 473
Fsp4HI GCNGC 6 cut(s) 38, 513, 516, 709, 825, 828
FspBI CTAG 1 cut(s) 300
GluI GCNGC 6 cut(s) 38, 513, 516, 709, 825, 828
GsaI CCCAGC 1 cut(s) 708
GsuI CTGGAG 4 cut(s) 435, 546, 588, 638
HapII CCGG 2 cut(s) 269, 833
Hin1II CATG 1 cut(s) 324
HinfI GANTC 2 cut(s) 21, 728
HpaII CCGG 2 cut(s) 269, 833
HphI GGTGA 2 cut(s) 227, 703
Hpy166II GTNNAC 2 cut(s) 600, 817
Hpy188I TCNGA 5 cut(s) 333, 379, 655, 662, 896
Hpy188III TCNNGA 7 cut(s) 139, 452, 605, 617, 725, 833, 866
Hpy8I GTNNAC 2 cut(s) 600, 817
HpyAV CCTTC 3 cut(s) 167, 423, 598
HpyCH4III ACNGT 2 cut(s) 131, 422
HpyCH4IV ACGT 2 cut(s) 432, 441
HpyF10VI GCNNNNNNNGC 1 cut(s) 633
HpyF3I CTNAG 4 cut(s) 140, 290, 376, 500
HpySE526I ACGT 2 cut(s) 432, 441
Hsp92II CATG 1 cut(s) 324
Kpn2I TCCGGA 1 cut(s) 832
Ksp22I TGATCA 1 cut(s) 693
Kzo9I GATC 2 cut(s) 607, 693
LmnI GCTCC 1 cut(s) 835
Lsp1109I GCAGC 5 cut(s) 24, 499, 695, 811, 839
LweI GCATC 2 cut(s) 262, 405
MaeI CTAG 1 cut(s) 300
MaeII ACGT 2 cut(s) 432, 441
MaeIII GTNAC 1 cut(s) 113
MalI GATC 2 cut(s) 609, 695
MboI GATC 2 cut(s) 607, 693
MboII GAAGA 4 cut(s) 236, 320, 521, 664
MfeI CAATTG 2 cut(s) 100, 358
MflI RGATCY 1 cut(s) 607
MhlI GDGCHC 1 cut(s) 602
MluCI AATT 6 cut(s) 14, 100, 358, 550, 664, 684
MroI TCCGGA 1 cut(s) 832
MseI TTAA 1 cut(s) 554
MspA1I CMGCKG 1 cut(s) 708
MspI CCGG 2 cut(s) 269, 833
MspR9I CCNGG 1 cut(s) 564
MunI CAATTG 2 cut(s) 100, 358
MvaI CCWGG 1 cut(s) 564
MwoI GCNNNNNNNGC 1 cut(s) 633
NdeII GATC 2 cut(s) 607, 693
NlaIII CATG 1 cut(s) 324
NspI RCATGY 1 cut(s) 324
PaeI GCATGC 1 cut(s) 324
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PfeI GAWTC 2 cut(s) 21, 728
PkrI GCNGC 6 cut(s) 39, 514, 517, 710, 826, 829
Psp6I CCWGG 1 cut(s) 562
PspFI CCCAGC 1 cut(s) 704
PspGI CCWGG 1 cut(s) 562
PspPI GGNCC 1 cut(s) 524
PstI CTGCAG 5 cut(s) 181, 254, 597, 629, 829
PsuI RGATCY 1 cut(s) 607
PvuII CAGCTG 1 cut(s) 708
RsaI GTAC 5 cut(s) 87, 133, 353, 435, 784
RsaNI GTAC 5 cut(s) 86, 132, 352, 434, 783
SaqAI TTAA 1 cut(s) 554
SatI GCNGC 6 cut(s) 38, 513, 516, 709, 825, 828
Sau3AI GATC 2 cut(s) 607, 693
Sau96I GGNCC 1 cut(s) 524
ScaI AGTACT 1 cut(s) 133
ScrFI CCNGG 1 cut(s) 564
SduI GDGCHC 1 cut(s) 602
SfaNI GCATC 2 cut(s) 262, 405
SfcI CTRYAG 5 cut(s) 177, 250, 593, 625, 825
SinI GGWCC 1 cut(s) 524
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
SphI GCATGC 1 cut(s) 324
Sse9I AATT 6 cut(s) 14, 100, 358, 550, 664, 684
SsiI CCGC 2 cut(s) 515, 689
SspMI CTAG 1 cut(s) 300
StyD4I CCNGG 1 cut(s) 562
TaaI ACNGT 2 cut(s) 131, 422
TaiI ACGT 2 cut(s) 435, 444
TaqII GACCGA 1 cut(s) 639
TasI AATT 6 cut(s) 14, 100, 358, 550, 664, 684
TatI WGTACW 1 cut(s) 131
TauI GCSGC 1 cut(s) 518
TfiI GAWTC 2 cut(s) 21, 728
Tru1I TTAA 1 cut(s) 554
Tru9I TTAA 1 cut(s) 554
TscAI CASTG 3 cut(s) 549, 602, 634
TseI GCWGC 5 cut(s) 37, 512, 708, 824, 827
TspDTI ATGAA 3 cut(s) 237, 469, 756
TspRI CASTG 3 cut(s) 549, 602, 634
VneI GTGCAC 1 cut(s) 598
VpaK11BI GGWCC 1 cut(s) 524
XapI RAATTY 2 cut(s) 14, 550
XceI RCATGY 1 cut(s) 324
XcmI CCANNNNNNNNNTGG 1 cut(s) 103
XspI CTAG 1 cut(s) 300
ZrmI AGTACT 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.