Rh5DG237600

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
27140797 .. 27143282
2486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG237600.1

Sequence Viewer

Length: 576 bp
ATGGTACGGTACTCTCAAGACTTAATATTTGGTATTGAGGAGGAGCACCCTTTTATATATCTGCCCAGCCCGAACACCGCTTTAATCCCGCAAGCGTACGGGCAGGTGCTTAACCCCTTGTTGGAAACCTTAAGAGACAGAGCTGCTTCAGGTGATTCTCGAAAAAAATATGCAGCAGGACATGCAGTTGTTCTAGCTCCAGCAGGACATGTGGACGATCGCGAACCGATATATGCACATGCGCAGTGCACTCCGGACATAGACAAAGTCAATTGCCGTAATTGCCTGAACAGTTGCATCTCTGCTATTCCACGATGTTGCAGTGGAAAGTCAGGAACAAGAGTTCTTAAACCAAGTTGTAATATAAGGTTTGAGTACGGTCTTTTCTATAAGTCTACAGCCGATTCAGAAGTAAATATTTCAGCTCCAGCTACTCCAACAACTCCAGCACTTCCACCTAAGCAAGATACATCAGGGTCGGGATTCAGACTTACTGAGGCGTCTGATAAATCTGAAAACTCCGTGTATGTGTCAAGAGGTATGGTTTCAGATATTACTGAAGTACATCCACGCTAG

Protein Analysis

191

Amino Acids

20.8

Weight (kDa)

6.51

Isoelectric Point (pI)

47.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 31 - 125 7.9e-11 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 94
Acc16I TGCGCA 1 cut(s) 243
Acc36I ACCTGC 1 cut(s) 94
AccI GTMKAC 1 cut(s) 395
AccII CGCG 1 cut(s) 222
AccIII TCCGGA 1 cut(s) 253
AciI CCGC 2 cut(s) 78, 89
AcuI CTGAAG 1 cut(s) 132
AcyI GRCGYC 1 cut(s) 500
AfaI GTAC 5 cut(s) 6, 11, 98, 377, 564
AfiI CCNNNNNNNGG 1 cut(s) 121
AflII CTTAAG 1 cut(s) 130
AflIII ACRYGT 1 cut(s) 208
AloI GAACNNNNNNTCC 2 cut(s) 327, 359
AluBI AGCT 4 cut(s) 143, 197, 425, 431
AluI AGCT 4 cut(s) 143, 197, 425, 431
Alw21I GWGCWC 2 cut(s) 48, 251
Alw26I GTCTC 1 cut(s) 129
Alw44I GTGCAC 1 cut(s) 247
Aor13HI TCCGGA 1 cut(s) 253
ApaLI GTGCAC 1 cut(s) 247
ApeKI GCWGC 2 cut(s) 143, 173
ArsI GACNNNNNNTTYG 2 cut(s) 11, 43
AspLEI GCGC 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 164
BaeGI GKGCMC 1 cut(s) 251
Bbv12I GWGCWC 2 cut(s) 48, 251
BbvI GCAGC 2 cut(s) 130, 185
BceAI ACGGC 1 cut(s) 261
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 2 cut(s) 194, 574
BfmI CTRYAG 1 cut(s) 396
BfrI CTTAAG 1 cut(s) 130
BfuAI ACCTGC 1 cut(s) 94
BisI GCNGC 2 cut(s) 144, 174
BlsI GCNGC 2 cut(s) 145, 175
BmsI GCATC 1 cut(s) 306
BpmI CTGGAG 3 cut(s) 183, 411, 429
Bpu10I CCTNAGC 1 cut(s) 459
BsaHI GRCGYC 1 cut(s) 500
BsaWI WCCGGW 1 cut(s) 253
Bsc4I CCNNNNNNNGG 1 cut(s) 121
BseAI TCCGGA 1 cut(s) 253
BseGI GGATG 1 cut(s) 565
BseLI CCNNNNNNNGG 1 cut(s) 121
BseMII CTCAG 1 cut(s) 486
BseRI GAGGAG 2 cut(s) 53, 56
BseSI GKGCMC 1 cut(s) 251
BseXI GCAGC 2 cut(s) 130, 185
BseYI CCCAGC 1 cut(s) 65
Bsh1236I CGCG 1 cut(s) 222
Bsh1285I CGRYCG 1 cut(s) 220
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 2 cut(s) 48, 251
BsiSI CCGG 1 cut(s) 254
BsiWI CGTACG 1 cut(s) 96
BslI CCNNNNNNNGG 1 cut(s) 121
BsmAI GTCTC 1 cut(s) 129
Bsp1286I GDGCHC 2 cut(s) 48, 251
Bsp13I TCCGGA 1 cut(s) 253
Bsp143I GATC 1 cut(s) 217
Bsp68I TCGCGA 1 cut(s) 222
BspACI CCGC 2 cut(s) 78, 89
BspCNI CTCAG 1 cut(s) 487
BspEI TCCGGA 1 cut(s) 253
BspFNI CGCG 1 cut(s) 222
BspMI ACCTGC 1 cut(s) 94
BspTI CTTAAG 1 cut(s) 130
BssMI GATC 1 cut(s) 217
BssNI GRCGYC 1 cut(s) 500
Bst4CI ACNGT 3 cut(s) 9, 293, 380
BstACI GRCGYC 1 cut(s) 500
BstAFI CTTAAG 1 cut(s) 130
BstAPI GCANNNNNTGC 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 93
BstDEI CTNAG 2 cut(s) 459, 495
BstF5I GGATG 1 cut(s) 565
BstFNI CGCG 1 cut(s) 222
BstHHI GCGC 1 cut(s) 244
BstKTI GATC 1 cut(s) 220
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 1 cut(s) 217
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 2 cut(s) 182, 282
BstNSI RCATGY 3 cut(s) 185, 212, 242
BstSFI CTRYAG 1 cut(s) 396
BstSLI GKGCMC 1 cut(s) 251
BstUI CGCG 1 cut(s) 222
BstV1I GCAGC 2 cut(s) 130, 185
BtsCI GGATG 1 cut(s) 565
BtsI GCAGTG 2 cut(s) 251, 328
BtsIMutI CAGTG 2 cut(s) 251, 328
BtuMI TCGCGA 1 cut(s) 222
BveI ACCTGC 1 cut(s) 94
Cac8I GCNNGC 1 cut(s) 93
CfoI GCGC 1 cut(s) 244
CseI GACGC 1 cut(s) 489
Csp6I GTAC 5 cut(s) 5, 10, 97, 376, 563
CviAII CATG 3 cut(s) 182, 209, 239
CviJI RGCY 6 cut(s) 69, 143, 197, 401, 425, 431
CviKI_1 RGCY 6 cut(s) 69, 143, 197, 401, 425, 431
CviQI GTAC 5 cut(s) 5, 10, 97, 376, 563
DdeI CTNAG 2 cut(s) 459, 495
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 132
FaeI CATG 3 cut(s) 185, 212, 242
FatI CATG 3 cut(s) 181, 208, 238
FauI CCCGC 1 cut(s) 96
FblI GTMKAC 1 cut(s) 395
Fnu4HI GCNGC 2 cut(s) 144, 174
FokI GGATG 1 cut(s) 552
Fsp4HI GCNGC 2 cut(s) 144, 174
FspBI CTAG 2 cut(s) 194, 574
FspI TGCGCA 1 cut(s) 243
GlaI GCGC 1 cut(s) 243
GluI GCNGC 2 cut(s) 144, 174
GsaI CCCAGC 1 cut(s) 69
GsuI CTGGAG 3 cut(s) 183, 411, 429
HapII CCGG 1 cut(s) 254
HgaI GACGC 1 cut(s) 489
HhaI GCGC 1 cut(s) 244
Hin1I GRCGYC 1 cut(s) 500
Hin1II CATG 3 cut(s) 185, 212, 242
Hin6I GCGC 1 cut(s) 242
HinP1I GCGC 1 cut(s) 242
HinfI GANTC 3 cut(s) 155, 404, 483
HpaII CCGG 1 cut(s) 254
HphI GGTGA 1 cut(s) 164
Hpy166II GTNNAC 3 cut(s) 214, 249, 396
Hpy188I TCNGA 5 cut(s) 409, 488, 505, 514, 550
Hpy188III TCNNGA 7 cut(s) 17, 159, 221, 254, 333, 480, 534
Hpy8I GTNNAC 3 cut(s) 214, 249, 396
HpyCH4III ACNGT 3 cut(s) 9, 293, 380
HpyCH4V TGCA 6 cut(s) 173, 185, 236, 249, 297, 321
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 282
HpyF3I CTNAG 2 cut(s) 459, 495
Hsp92I GRCGYC 1 cut(s) 500
Hsp92II CATG 3 cut(s) 185, 212, 242
HspAI GCGC 1 cut(s) 242
Kpn2I TCCGGA 1 cut(s) 253
Kzo9I GATC 1 cut(s) 217
LmnI GCTCC 3 cut(s) 43, 202, 430
Lsp1109I GCAGC 2 cut(s) 130, 185
LweI GCATC 1 cut(s) 306
MaeI CTAG 2 cut(s) 194, 574
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MfeI CAATTG 1 cut(s) 271
MhlI GDGCHC 2 cut(s) 48, 251
MluCI AATT 2 cut(s) 271, 280
MmeI TCCRAC 2 cut(s) 102, 461
MnlI CCTC 4 cut(s) 31, 34, 490, 530
MroI TCCGGA 1 cut(s) 253
MseI TTAA 5 cut(s) 23, 83, 111, 131, 348
MspCI CTTAAG 1 cut(s) 130
MspI CCGG 1 cut(s) 254
MunI CAATTG 1 cut(s) 271
MvnI CGCG 1 cut(s) 222
MwoI GCNNNNNNNGC 2 cut(s) 182, 282
NdeII GATC 1 cut(s) 217
NlaIII CATG 3 cut(s) 185, 212, 242
NruI TCGCGA 1 cut(s) 222
NsbI TGCGCA 1 cut(s) 243
NspI RCATGY 3 cut(s) 185, 212, 242
PaqCI CACCTGC 1 cut(s) 94
PciI ACATGT 1 cut(s) 208
PfeI GAWTC 3 cut(s) 155, 404, 483
Pfl23II CGTACG 1 cut(s) 96
PflFI GACNNNGTC 1 cut(s) 266
PkrI GCNGC 2 cut(s) 145, 175
Ple19I CGATCG 1 cut(s) 220
PscI ACATGT 1 cut(s) 208
PspFI CCCAGC 1 cut(s) 65
PspLI CGTACG 1 cut(s) 96
PsyI GACNNNGTC 1 cut(s) 266
PvuI CGATCG 1 cut(s) 220
RruI TCGCGA 1 cut(s) 222
RsaI GTAC 5 cut(s) 6, 11, 98, 377, 564
RsaNI GTAC 5 cut(s) 5, 10, 97, 376, 563
SaqAI TTAA 5 cut(s) 23, 83, 111, 131, 348
SatI GCNGC 2 cut(s) 144, 174
Sau3AI GATC 1 cut(s) 217
SduI GDGCHC 2 cut(s) 48, 251
SfaNI GCATC 1 cut(s) 306
SfcI CTRYAG 1 cut(s) 396
SmlI CTYRAG 2 cut(s) 15, 130
SmoI CTYRAG 2 cut(s) 15, 130
Sse9I AATT 2 cut(s) 271, 280
SsiI CCGC 2 cut(s) 78, 89
SspI AATATT 2 cut(s) 27, 418
SspMI CTAG 2 cut(s) 194, 574
TaaI ACNGT 3 cut(s) 9, 293, 380
TaqI TCGA 1 cut(s) 160
TasI AATT 2 cut(s) 271, 280
TatI WGTACW 1 cut(s) 562
TfiI GAWTC 3 cut(s) 155, 404, 483
Tru1I TTAA 5 cut(s) 23, 83, 111, 131, 348
Tru9I TTAA 5 cut(s) 23, 83, 111, 131, 348
TscAI CASTG 2 cut(s) 251, 328
TseI GCWGC 2 cut(s) 143, 173
TspGWI ACGGA 1 cut(s) 511
TspRI CASTG 2 cut(s) 251, 328
Tth111I GACNNNGTC 1 cut(s) 266
Vha464I CTTAAG 1 cut(s) 130
VneI GTGCAC 1 cut(s) 247
XceI RCATGY 3 cut(s) 185, 212, 242
XmiI GTMKAC 1 cut(s) 395
XspI CTAG 2 cut(s) 194, 574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.