Rroxscaffold_5G00357650

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
37358721 .. 37376151
17431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00357650.1

Sequence Viewer

Length: 2109 bp
ATGATTAGACTGGAGATTTGGGCAAATCCAGTGGCCTTCATTTCTGTTCAACTGAAGCCCCTCAGTTCGATTCAGAGTTTTCATGCAGATCGAGAAGAAAGAGATCCAAGATTTCAGAACCAACCCATCTTTTCAAACAAAGTTTACGAAAGAGGCCTGACAGTTGGTTTTAAACAGGGTGGATGCCCGGGCATATCGATGGATTCCGAGAGCAAAGAAAATGCAAGACCAGATGTTTCAATTATTGAATATAATGGTTTTAAAATAGAGAAAAGTGATCCAGAGGGAGATAGAGAGATCGACTGTGATAGAGAGATAGAGAGATTGGGTGTGTCTTTTGCTTTGTACAAAGAGATAGAGAGAGATTCAGGAAACGGGATTCCCACCTCATCATCTCAGCGAGTTCCTTTAGACTTGAGCAACAGATCGAGGCAAATGGGTTTCTCAATCTGGTTGCTTCTTTTCTTAATCTTAGACCTCATTGTTGTTCCTACCTTAGCCCAAGATTGCTCTCGACGTGACTTCTGCTGGACATGTTCCAATACGGGCAGTTACACTAATGGCAGCATGTACGAACAAAATCTCAACAGCCTCCTCTCCTCCTTCTCTTCCAGCCCTACCCAAAACCAAGCTAACTCCGGCTTTTACAACTCTTCTCTCGGGCAAGACTCCAACAAAGTGAATGCAATTGCAATGTGCCGAGGAGACCTCGGACTCAAAGCCTGTAGTAGCTGTCTCAAGAACAACAGTGTCAATCTGTTGCAAACATGTTTGTATCAAAGGGAAGCAACCTTATGGGCCCCCCATTGTGTGGTACGTTACTCGGACAACTCGATATTTGGTATCGAGAAAGACGATCCTAGTGTGTACGTCCCAAGCCAAAAAAATGTGTCAAACGCCCAAGAGTACGAGCGGGTGCTAAACCCCTTGTTGCAATATTTAAGTGACAAAGCTGCTTCAGGGGATTCTGTTAAAAAGTACGCAGCAGGACATGCAACAGTTCCGGGAAGGGAAATGATATATGCACTTGTGCAGTGCACTCCGGATTTAGACAACCAAAATTGCAGTAATTGCCTTAAAAAGGCCATGTCTGATATTCAGGGCCATATTGGTGCAAAGCGAGGAGGACGAGTTCTTAAACCGAGCTGTACTCTAAGGTATGAGGCCGATCTTTTCTACGAGGCTACATCAGATTCAATAGTAAATGTTTCAACTCCGGTTACTCCAACAACTCCAGTAACTCCACCATCAGTTGATTCAGTTCCATCCAAGCAAGATGATAATTCAGAAAAATTTAGTTTTGAGGATTCATTACAATATGACTTTGAAATTATAAGATCTGCGACCGATGACTTTTCTGATGCCAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTATGTTATTAAACGGACAGCATATTGCAGTGAAAAGGCTCTGTAAGAATTCTGAACAGGGTGATCGTGAATTTAAAAATGAAGTCATGTTACTCGCTCAACTTCAACACCGAAACGTAGTAAGGCTCCTAGGCTTTTGCTTGACGGGGAGGAAAGGCTCCTCATTTACGAATATATACCTAATACAAGGAAGTCAGCTTGATTTGTGGGATATGAGAGGAATTGGCCGCGGTCTTCTTTACCTCCATGAAGATTCTCGCCTTCGAATTATTCACCGGGATCTCAAACCTAGCAACATTCTGCTAGGTGAAGATATGAACCCTAAAATTGCAGATTTTGGTCTAGCAAAATTAGTTGTCATGGATCAAACTCAAGGGGATACAAAGATCATTGCTTGGAGAAATTGGAGGAGCGATACAATTCCAAATATCATAGATCCCATGTTGACAATAGGGTCAAGAAATGAAATGATCAGATGCATCCACATTGGTTTACTATGTGTCCAAGAAAATGTGAATGACAGACCAATCATGGCTTCTGTTGTTTCCATGCTTAACAGTCACTCTCTCACACTCCCAGTACCTTCAAAACCACCATATTATTCACACTATAACACTGATTCAGATACATTAAGGTCTGCCAACAGCTCTGTGTATGTGTCGAGAAATCAAGTTTCAAACATTACAGAACCGTATCCTCGCTAG

Protein Analysis

702

Amino Acids

78.4

Weight (kDa)

6.07

Isoelectric Point (pI)

46.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 178 - 276 6.9e-21 Salt stress response/antifungal
Stress-antifung PF01657 295 - 389 1.2e-13 Salt stress response/antifungal
Pkinase PF00069 453 - 592 1.9e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 456 - 593 9.5e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1334
AasI GACNNNNNNGTC 1 cut(s) 1858
AccB7I CCANNNNNTGG 1 cut(s) 811
AccBSI CCGCTC 1 cut(s) 913
AccII CGCG 1 cut(s) 1635
AccIII TCCGGA 1 cut(s) 1042
AciI CCGC 3 cut(s) 913, 1633, 1635
AclWI GGATC 6 cut(s) 98, 272, 851, 1692, 1776, 1835
AcoI YGGCCR 1 cut(s) 1630
AcsI RAATTY 3 cut(s) 1292, 1453, 1475
AcuI CTGAAG 2 cut(s) 74, 942
AfaI GTAC 8 cut(s) 347, 572, 816, 869, 908, 980, 1150, 1986
AfiI CCNNNNNNNGG 2 cut(s) 811, 1081
AflIII ACRYGT 2 cut(s) 533, 767
AjiI CACGTC 1 cut(s) 518
AjuI GAANNNNNNNTTGG 2 cut(s) 1924, 1956
AloI GAACNNNNNNTCC 2 cut(s) 1116, 1148
AluBI AGCT 8 cut(s) 632, 732, 953, 1146, 1372, 1394, 1603, 2052
AluI AGCT 8 cut(s) 632, 732, 953, 1146, 1372, 1394, 1603, 2052
Alw21I GWGCWC 1 cut(s) 1040
Alw26I GTCTC 2 cut(s) 699, 740
Alw44I GTGCAC 1 cut(s) 1036
AlwI GGATC 6 cut(s) 98, 272, 851, 1692, 1776, 1835
Ama87I CYCGRG 2 cut(s) 187, 659
Aor13HI TCCGGA 1 cut(s) 1042
AoxI GGCC 7 cut(s) 33, 154, 798, 1083, 1102, 1164, 1630
ApaI GGGCCC 1 cut(s) 802
ApaLI GTGCAC 1 cut(s) 1036
ApeKI GCWGC 3 cut(s) 564, 953, 983
ApoI RAATTY 3 cut(s) 1292, 1453, 1475
ArsI GACNNNNNNTTYG 1 cut(s) 32
AspA2I CCTAGG 1 cut(s) 1534
AspS9I GGNCC 3 cut(s) 798, 799, 1102
AsuC2I CCSGG 4 cut(s) 188, 189, 1005, 1682
AsuHPI GGTGA 3 cut(s) 1478, 1670, 1724
AsuII TTCGAA 1 cut(s) 1669
AvaI CYCGRG 2 cut(s) 187, 659
AvrII CCTAGG 1 cut(s) 1534
BaeGI GKGCMC 2 cut(s) 802, 1040
BanII GRGCYC 1 cut(s) 802
BarI GAAGNNNNNNTAC 2 cut(s) 1479, 1511
BbsI GAAGAC 1 cut(s) 1631
Bbv12I GWGCWC 1 cut(s) 1040
BbvI GCAGC 3 cut(s) 576, 940, 995
BccI CCATC 4 cut(s) 134, 193, 1255, 1273
BciVI GTATCC 2 cut(s) 1777, 2109
BclI TGATCA 1 cut(s) 1875
BcnI CCSGG 4 cut(s) 188, 189, 1005, 1682
BcoDI GTCTC 2 cut(s) 699, 740
BfaI CTAG 6 cut(s) 861, 1535, 1695, 1709, 1748, 2107
BfmI CTRYAG 1 cut(s) 724
BfuI GTATCC 2 cut(s) 1777, 2109
BglII AGATCT 1 cut(s) 1337
BisI GCNGC 4 cut(s) 565, 954, 984, 1633
BlnI CCTAGG 1 cut(s) 1534
BlsI GCNGC 4 cut(s) 566, 955, 985, 1634
Bme1390I CCNGG 4 cut(s) 188, 189, 1005, 1682
BmeT110I CYCGRG 2 cut(s) 187, 659
BmgBI CACGTC 1 cut(s) 518
BmgT120I GGNCC 3 cut(s) 798, 799, 1102
BmiI GGNNCC 4 cut(s) 800, 801, 1532, 1564
BmrFI CCNGG 4 cut(s) 188, 189, 1005, 1682
BmrI ACTGGG 1 cut(s) 1976
BmsI GCATC 4 cut(s) 173, 1351, 1871, 1893
BmuI ACTGGG 1 cut(s) 1976
BpiI GAAGAC 1 cut(s) 1631
BplI GAGNNNNNCTC 4 cut(s) 693, 725, 1135, 1167
BpmI CTGGAG 2 cut(s) 32, 1218
Bpu10I CCTNAGC 1 cut(s) 496
Bpu14I TTCGAA 1 cut(s) 1669
BpuEI CTTGAG 3 cut(s) 436, 722, 1761
BpuMI CCSGG 4 cut(s) 188, 189, 1005, 1682
Bsa29I ATCGAT 1 cut(s) 197
BsaI GGTCTC 1 cut(s) 699
BsaJI CCNNGG 5 cut(s) 187, 700, 709, 1534, 1633
BsaWI WCCGGW 2 cut(s) 1042, 1216
BsaXI ACNNNNNCTCC 2 cut(s) 1116, 1146
Bsc4I CCNNNNNNNGG 2 cut(s) 811, 1081
Bse1I ACTGG 4 cut(s) 15, 29, 1235, 1982
Bse3DI GCAATG 2 cut(s) 699, 1794
BseAI TCCGGA 1 cut(s) 1042
BseCI ATCGAT 1 cut(s) 197
BseDI CCNNGG 5 cut(s) 187, 700, 709, 1534, 1633
BseGI GGATG 3 cut(s) 188, 1265, 1884
BseLI CCNNNNNNNGG 2 cut(s) 811, 1081
BseMI GCAATG 2 cut(s) 699, 1794
BseMII CTCAG 2 cut(s) 76, 410
BseNI ACTGG 4 cut(s) 15, 29, 1235, 1982
BseRI GAGGAG 6 cut(s) 584, 589, 717, 1137, 1555, 1828
BseSI GKGCMC 2 cut(s) 802, 1040
BseXI GCAGC 3 cut(s) 576, 940, 995
BsgI GTGCAG 1 cut(s) 1052
Bsh1236I CGCG 1 cut(s) 1635
Bsh1285I CGRYCG 1 cut(s) 1347
BshFI GGCC 7 cut(s) 35, 156, 800, 1085, 1104, 1166, 1632
BshVI ATCGAT 1 cut(s) 197
BsiEI CGRYCG 1 cut(s) 1347
BsiHKAI GWGCWC 1 cut(s) 1040
BsiHKCI CYCGRG 2 cut(s) 187, 659
BsiSI CCGG 6 cut(s) 188, 639, 1004, 1043, 1217, 1681
BslFI GGGAC 1 cut(s) 857
BslI CCNNNNNNNGG 2 cut(s) 811, 1081
BsmAI GTCTC 2 cut(s) 699, 740
BsmFI GGGAC 1 cut(s) 857
BsmI GAATGC 1 cut(s) 688
BsnI GGCC 7 cut(s) 35, 156, 800, 1085, 1104, 1166, 1632
Bso31I GGTCTC 1 cut(s) 699
BsoBI CYCGRG 2 cut(s) 187, 659
Bsp119I TTCGAA 1 cut(s) 1669
Bsp120I GGGCCC 1 cut(s) 798
Bsp1286I GDGCHC 2 cut(s) 802, 1040
Bsp13I TCCGGA 1 cut(s) 1042
Bsp1407I TGTACA 1 cut(s) 345
BspACI CCGC 3 cut(s) 913, 1633, 1635
BspANI GGCC 7 cut(s) 35, 156, 800, 1085, 1104, 1166, 1632
BspCNI CTCAG 2 cut(s) 75, 409
BspDI ATCGAT 1 cut(s) 197
BspEI TCCGGA 1 cut(s) 1042
BspFNI CGCG 1 cut(s) 1635
BspLI GGNNCC 4 cut(s) 800, 801, 1532, 1564
BspPI GGATC 6 cut(s) 98, 272, 851, 1692, 1776, 1835
BspT104I TTCGAA 1 cut(s) 1669
BspTNI GGTCTC 1 cut(s) 699
BsrBI CCGCTC 1 cut(s) 913
BsrDI GCAATG 2 cut(s) 699, 1794
BsrGI TGTACA 1 cut(s) 345
BsrI ACTGG 4 cut(s) 15, 29, 1235, 1982
BssECI CCNNGG 5 cut(s) 187, 700, 709, 1534, 1633
BssT1I CCWWGG 1 cut(s) 1534
Bst4CI ACNGT 6 cut(s) 163, 305, 749, 1000, 1964, 2097
Bst6I CTCTTC 2 cut(s) 613, 658
BstAPI GCANNNNNTGC 2 cut(s) 992, 1071
BstAUI TGTACA 1 cut(s) 345
BstBI TTCGAA 1 cut(s) 1669
BstDEI CTNAG 5 cut(s) 62, 396, 472, 496, 1154
BstDSI CCRYGG 1 cut(s) 1633
BstENI CCTNNNNNAGG 1 cut(s) 1079
BstF5I GGATG 3 cut(s) 188, 1265, 1884
BstFNI CGCG 1 cut(s) 1635
BstMAI GTCTC 2 cut(s) 699, 740
BstMCI CGRYCG 1 cut(s) 1347
BstMWI GCNNNNNNNGC 2 cut(s) 992, 1071
BstNSI RCATGY 4 cut(s) 537, 571, 771, 995
BstSCI CCNGG 4 cut(s) 186, 187, 1003, 1680
BstSFI CTRYAG 1 cut(s) 724
BstSLI GKGCMC 2 cut(s) 802, 1040
BstUI CGCG 1 cut(s) 1635
BstV1I GCAGC 3 cut(s) 576, 940, 995
BstV2I GAAGAC 1 cut(s) 1631
BstX2I RGATCY 4 cut(s) 103, 1337, 1684, 1840
BstYI RGATCY 4 cut(s) 103, 1337, 1684, 1840
Bsu15I ATCGAT 1 cut(s) 197
BsuI GTATCC 2 cut(s) 1777, 2109
BsuRI GGCC 7 cut(s) 35, 156, 800, 1085, 1104, 1166, 1632
BsuTUI ATCGAT 1 cut(s) 197
BtgI CCRYGG 1 cut(s) 1633
BtrI CACGTC 1 cut(s) 518
BtsCI GGATG 3 cut(s) 188, 1265, 1884
BtsI GCAGTG 2 cut(s) 1040, 1440
BtsIMutI CAGTG 5 cut(s) 36, 754, 1040, 1440, 2019
Cfr13I GGNCC 3 cut(s) 798, 799, 1102
Cfr42I CCGCGG 1 cut(s) 1636
Cfr9I CCCGGG 1 cut(s) 187
ClaI ATCGAT 1 cut(s) 197
Csp6I GTAC 8 cut(s) 346, 571, 815, 868, 907, 979, 1149, 1985
CspCI CAANNNNNGTGG 2 cut(s) 12, 47
CviQI GTAC 8 cut(s) 346, 571, 815, 868, 907, 979, 1149, 1985
DdeI CTNAG 5 cut(s) 62, 396, 472, 496, 1154
DraI TTTAAA 3 cut(s) 172, 262, 1480
DrdI GACNNNNNNGTC 1 cut(s) 1858
DseDI GACNNNNNNGTC 1 cut(s) 1858
EaeI YGGCCR 1 cut(s) 1630
Eam1104I CTCTTC 2 cut(s) 613, 658
EarI CTCTTC 2 cut(s) 613, 658
Eco130I CCWWGG 1 cut(s) 1534
Eco147I AGGCCT 1 cut(s) 156
Eco24I GRGCYC 1 cut(s) 802
Eco31I GGTCTC 1 cut(s) 699
Eco57I CTGAAG 2 cut(s) 74, 942
Eco88I CYCGRG 2 cut(s) 187, 659
EcoNI CCTNNNNNAGG 1 cut(s) 1079
EcoO109I RGGNCCY 1 cut(s) 799
EcoRI GAATTC 1 cut(s) 1453
EcoT14I CCWWGG 1 cut(s) 1534
EcoT22I ATGCAT 1 cut(s) 1886
EcoT38I GRGCYC 1 cut(s) 802
ErhI CCWWGG 1 cut(s) 1534
FaqI GGGAC 1 cut(s) 857
FauI CCCGC 1 cut(s) 906
FbaI TGATCA 1 cut(s) 1875
Fnu4HI GCNGC 4 cut(s) 565, 954, 984, 1633
FokI GGATG 3 cut(s) 195, 1252, 1871
FriOI GRGCYC 1 cut(s) 802
Fsp4HI GCNGC 4 cut(s) 565, 954, 984, 1633
FspBI CTAG 6 cut(s) 861, 1535, 1695, 1709, 1748, 2107
GluI GCNGC 4 cut(s) 565, 954, 984, 1633
GsuI CTGGAG 2 cut(s) 32, 1218
HaeIII GGCC 7 cut(s) 35, 156, 800, 1085, 1104, 1166, 1632
HapII CCGG 6 cut(s) 188, 639, 1004, 1043, 1217, 1681
HincII GTYRAC 1 cut(s) 1851
HindII GTYRAC 1 cut(s) 1851
HindIII AAGCTT 1 cut(s) 1370
HpaII CCGG 6 cut(s) 188, 639, 1004, 1043, 1217, 1681
HphI GGTGA 3 cut(s) 1478, 1670, 1724
Hpy166II GTNNAC 6 cut(s) 145, 868, 1038, 1399, 1851, 1898
Hpy8I GTNNAC 6 cut(s) 145, 868, 1038, 1399, 1851, 1898
Hpy99I CGWCG 1 cut(s) 519
HpyAV CCTTC 5 cut(s) 46, 613, 1002, 1676, 1998
HpyCH4III ACNGT 6 cut(s) 163, 305, 749, 1000, 1964, 2097
HpyCH4IV ACGT 4 cut(s) 517, 817, 870, 1521
HpyF10VI GCNNNNNNNGC 2 cut(s) 992, 1071
HpyF3I CTNAG 5 cut(s) 62, 396, 472, 496, 1154
HpySE526I ACGT 4 cut(s) 517, 817, 870, 1521
Kpn2I TCCGGA 1 cut(s) 1042
Ksp22I TGATCA 1 cut(s) 1875
KspI CCGCGG 1 cut(s) 1636
LmnI GCTCC 4 cut(s) 1391, 1536, 1568, 1815
Lsp1109I GCAGC 3 cut(s) 576, 940, 995
LweI GCATC 4 cut(s) 173, 1351, 1871, 1893
MaeI CTAG 6 cut(s) 861, 1535, 1695, 1709, 1748, 2107
MaeII ACGT 4 cut(s) 517, 817, 870, 1521
MaeIII GTNAC 8 cut(s) 518, 551, 818, 944, 1219, 1237, 1494, 1964
MbiI CCGCTC 1 cut(s) 913
MboII GAAGA 6 cut(s) 107, 600, 645, 1631, 1667, 1727
MfeI CAATTG 1 cut(s) 687
MflI RGATCY 4 cut(s) 103, 1337, 1684, 1840
MhlI GDGCHC 2 cut(s) 802, 1040
MlyI GAGTC 2 cut(s) 662, 708
MmeI TCCRAC 2 cut(s) 696, 1250
Mph1103I ATGCAT 1 cut(s) 1886
MroI TCCGGA 1 cut(s) 1042
MslI CAYNNNNRTG 2 cut(s) 197, 1110
MspA1I CMGCKG 1 cut(s) 1635
MspI CCGG 6 cut(s) 188, 639, 1004, 1043, 1217, 1681
MspR9I CCNGG 4 cut(s) 188, 189, 1005, 1682
MunI CAATTG 1 cut(s) 687
Mva1269I GAATGC 1 cut(s) 688
MvnI CGCG 1 cut(s) 1635
MwoI GCNNNNNNNGC 2 cut(s) 992, 1071
NciI CCSGG 4 cut(s) 188, 189, 1005, 1682
NlaIV GGNNCC 4 cut(s) 800, 801, 1532, 1564
NmeAIII GCCGAG 1 cut(s) 725
NmuCI GTSAC 3 cut(s) 518, 944, 1964
NsiI ATGCAT 1 cut(s) 1886
NspI RCATGY 4 cut(s) 537, 571, 771, 995
NspV TTCGAA 1 cut(s) 1669
PceI AGGCCT 1 cut(s) 156
PciI ACATGT 2 cut(s) 533, 767
PcsI WCGNNNNNNNCGW 2 cut(s) 830, 852
PctI GAATGC 1 cut(s) 688
PflMI CCANNNNNTGG 1 cut(s) 811
PfoI TCCNGGA 1 cut(s) 1003
PkrI GCNGC 4 cut(s) 566, 955, 985, 1634
PleI GAGTC 2 cut(s) 662, 708
PpsI GAGTC 2 cut(s) 662, 708
PscI ACATGT 2 cut(s) 533, 767
PsiI TTATAA 1 cut(s) 1334
PspN4I GGNNCC 4 cut(s) 800, 801, 1532, 1564
PspOMI GGGCCC 1 cut(s) 798
PspPI GGNCC 3 cut(s) 798, 799, 1102
PsuI RGATCY 4 cut(s) 103, 1337, 1684, 1840
RsaI GTAC 8 cut(s) 347, 572, 816, 869, 908, 980, 1150, 1986
RsaNI GTAC 8 cut(s) 346, 571, 815, 868, 907, 979, 1149, 1985
RseI CAYNNNNRTG 2 cut(s) 197, 1110
SacII CCGCGG 1 cut(s) 1636
SatI GCNGC 4 cut(s) 565, 954, 984, 1633
Sau96I GGNCC 3 cut(s) 798, 799, 1102
SchI GAGTC 2 cut(s) 662, 708
ScrFI CCNGG 4 cut(s) 188, 189, 1005, 1682
SduI GDGCHC 2 cut(s) 802, 1040
SfaNI GCATC 4 cut(s) 173, 1351, 1871, 1893
SfcI CTRYAG 1 cut(s) 724
Sfr303I CCGCGG 1 cut(s) 1636
SfuI TTCGAA 1 cut(s) 1669
SgrBI CCGCGG 1 cut(s) 1636
SmaI CCCGGG 1 cut(s) 189
SmiMI CAYNNNNRTG 2 cut(s) 197, 1110
SmlI CTYRAG 3 cut(s) 415, 737, 1776
SmoI CTYRAG 3 cut(s) 415, 737, 1776
SrfI GCCCGGGC 1 cut(s) 189
SseBI AGGCCT 1 cut(s) 156
SsiI CCGC 3 cut(s) 913, 1633, 1635
SspI AATATT 1 cut(s) 938
SspMI CTAG 6 cut(s) 861, 1535, 1695, 1709, 1748, 2107
StuI AGGCCT 1 cut(s) 156
StyD4I CCNGG 4 cut(s) 186, 187, 1003, 1680
StyI CCWWGG 1 cut(s) 1534
TaaI ACNGT 6 cut(s) 163, 305, 749, 1000, 1964, 2097
TaiI ACGT 4 cut(s) 520, 820, 873, 1524
TaqII GACCGA 1 cut(s) 1361
TatI WGTACW 2 cut(s) 345, 1148
TauI GCSGC 1 cut(s) 1635
TscAI CASTG 5 cut(s) 36, 754, 1040, 1440, 2026
TseFI GTSAC 3 cut(s) 518, 944, 1964
TseI GCWGC 3 cut(s) 564, 953, 983
Tsp45I GTSAC 3 cut(s) 518, 944, 1964
TspDTI ATGAA 7 cut(s) 28, 71, 1299, 1500, 1668, 1736, 1884
TspGWI ACGGA 1 cut(s) 1434
TspMI CCCGGG 1 cut(s) 187
TspRI CASTG 5 cut(s) 36, 754, 1040, 1440, 2026
Van91I CCANNNNNTGG 1 cut(s) 811
VneI GTGCAC 1 cut(s) 1036
XagI CCTNNNNNAGG 1 cut(s) 1079
XapI RAATTY 3 cut(s) 1292, 1453, 1475
XceI RCATGY 4 cut(s) 537, 571, 771, 995
XmaI CCCGGG 1 cut(s) 187
XmaJI CCTAGG 1 cut(s) 1534
XspI CTAG 6 cut(s) 861, 1535, 1695, 1709, 1748, 2107
Zsp2I ATGCAT 1 cut(s) 1886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.