MD15G1117400.v1.1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
8376957 .. 8379861
2905 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1117400.v1.1.491

Sequence Viewer

Length: 2004 bp
ATGTTCATACATAATTTGCAGAGCCATTGGTTCACACAAGACAAATATACAATGATTTCCTCAACCTCTCCATTTTTTATCTCTCTCATAATTCTGTTACTCATTGCCAATACCAGTACTCAATCCCTTGATCGTCAGCAACCTTTTCTACGTGTGGCATGTTCTTACAACAAGGGCAACTACACCAACAATAGTGTCTACCAGACCAACCTCAATCGTCTTCTGCCTTCTCTCCTCCTCAGCAATGTCAACAGCAACGGCTATGGCTTCTACAGTTACTGTTACGGTGAAAACTCCGACCAAGTTAACGCAATCGGACTTTGTAGAGGAGATCTTATAGCCGATGCTTGCAGTGCTTGCCTTGGTAACTCTACTAATATTCTCACACAGACTTGCCCTAATCAGATGGAGGCAACTATATGGAACGAAAACTGCATGTTGCGCTACTCAAACCGCACTTTATATGGAATCCTTGAAGTTCTTCCTGCTTTTTATCAATCGAATTCAGAAAACGTTTCGTCATCATCGTCAGTGGTTGATGAGTTCAACCAACATCTCATGACACTGTTGGAAAGTCTAAGAAGTGAAGTTTCGGGAGGTGGTTCGCTTAGGAAGTATGCAGTAGGAAACAAAAGCGTAACAGATTCTAATCGGACGATGTTTGGCCTTGCGCAGTGCACTCCAGATTTGTCCACCTTGGACTGCAACCATTGCTTAAACAGTGGTTTGGAGGTTATTAATAACAGTTTTTATGGCAAGGATTCTGTGAGGTTTGTTAAACCTAGCTGTAATCTAAGGTATGAGGCTTACCTCTTCTTTGATCCGGCGATCGGATCATCAGGAACACTGGCACCAGCCCCAACTTCTCCACCATCAGGAAAGAAGAGTACTCATACACCTTGGGTTATCATTATACCTTTTGTGGCGACTGCTGAAGTTTCGGTACTAGTTATATCCATCTGCATGTGTCTGAGAGCGAAGAAGAGAAAGAACAGGCTTACTGAAGAAGAAATTACAAATGCAGATCAAATTACTAGTGCAGAAGCCTTGCAATTCGACTTTGACTCCATTAGAGTTGCCACAAATAACTTTTCCGAGGCAAATAAGCTTGGACGAGGTGGATTAGGTGCCGTTTACAAGGGTAAGCTTGCGAGTGATGAAGATATAGCAGTGAAAAGGCTTTCTAGAGATTCTGCACAAGGAGACTTGGAATTTAAAAACGAGGTCTCGTTAGTGGCAAAGCTTCAACATCGGAATTTGGTTAGGCTCTTAGGTTTTTGCCTGGAAGGAAATGAAAGGCTTCTTGTCTATGAGTTTGTCCCTAATGGAAGCCTTGATCAATTCATATTTGGCATTGGACGAGGACTTCTTTACCTTCACGAAGATTCTCGTCTCAGGATTATTCACCATGATCTAAAAGCTAGCAACGTATTGCTAGATGCAGAAATGAACCCCAAAATTGCTGATTTTGGGTTGGCAAGGTTGTTTGTGCTTGACCAAGTACAAGGCGAAACCAATCGAATTGTGGGAACCTATGGATATATGGCTCCAGAATATGTAATGCGTGGACAATTTTCAGTTAGATCCGATGTCTATAGCTTTGGTGTGTTAGTTTTGGAGATAGTACCTGGCCAGAAAAATAGTTATTTCCACCATGAAGGCAATATGGAGGATCTTCTAAGCTATGTACGGAAAAACTGGCGAGAAGAGACAACTTCGAATATAATAGACCCTACATGGATTGCTGGTTCAAGAGGTGAAATATTGAGATGCATCCATATAGGATTATTATGTGTGCAACAAAATGTAGCTGATAGGCCGACAATGGCTTCCGTTATTCTTATGCTTACTAGCAACTCTCTTTCTCTTCCGGAACCCTCACAGCCAGCATTTTTTATGGTTCGATCAGACATGATGGCAGTTGAAGGGTTAGATCAATATCGAAGCAGCTTTATCCAACAATCAGTAAATGAGGTTTCAATTACGGAACTATCTCCTCGCTAG

Protein Analysis

668

Amino Acids

74.33

Weight (kDa)

5.82

Isoelectric Point (pI)

42.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 54 - 152 1.6e-22 Salt stress response/antifungal
Stress-antifung PF01657 177 - 270 2.9e-11 Salt stress response/antifungal
Pkinase PF00069 365 - 611 7.4e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 367 - 576 1.9e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 672
AccB1I GGYRCC 2 cut(s) 850, 1127
AccI GTMKAC 1 cut(s) 198
AccIII TCCGGA 1 cut(s) 1870
AciI CCGC 1 cut(s) 454
AclI AACGTT 1 cut(s) 513
AclWI GGATC 4 cut(s) 815, 841, 1578, 1680
AcoI YGGCCR 1 cut(s) 1630
AcsI RAATTY 3 cut(s) 502, 1211, 1255
AcuI CTGAAG 2 cut(s) 954, 1023
AfaI GTAC 6 cut(s) 118, 889, 945, 1503, 1626, 1689
AfiI CCNNNNNNNGG 2 cut(s) 830, 875
AflIII ACRYGT 1 cut(s) 151
AgsI TTSAA 6 cut(s) 476, 547, 1247, 1752, 1925, 1980
AhlI ACTAGT 2 cut(s) 946, 1034
AjnI CCWGG 2 cut(s) 1281, 1627
AloI GAACNNNNNNTCC 2 cut(s) 1732, 1764
AluBI AGCT 9 cut(s) 786, 1108, 1147, 1243, 1421, 1599, 1683, 1811, 1950
AluI AGCT 9 cut(s) 786, 1108, 1147, 1243, 1421, 1599, 1683, 1811, 1950
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 4 cut(s) 1197, 1231, 1397, 1703
Alw44I GTGCAC 1 cut(s) 676
AlwI GGATC 4 cut(s) 815, 841, 1578, 1680
AlwNI CAGNNNCTG 1 cut(s) 279
Aor13HI TCCGGA 1 cut(s) 1870
AoxI GGCC 3 cut(s) 664, 1630, 1817
ApaLI GTGCAC 1 cut(s) 676
ApeKI GCWGC 1 cut(s) 1947
ApoI RAATTY 3 cut(s) 502, 1211, 1255
AseI ATTAAT 1 cut(s) 738
Asp700I GAANNNNTTC 2 cut(s) 480, 1299
AspLEI GCGC 2 cut(s) 444, 673
AsuHPI GGTGA 3 cut(s) 299, 1397, 1769
AsuII TTCGAA 1 cut(s) 1718
AsuNHI GCTAGC 1 cut(s) 1421
BaeGI GKGCMC 1 cut(s) 680
BalI TGGCCA 1 cut(s) 1632
BanI GGYRCC 2 cut(s) 850, 1127
BarI GAAGNNNNNNTAC 2 cut(s) 927, 959
BbsI GAAGAC 1 cut(s) 212
Bbv12I GWGCWC 1 cut(s) 680
BbvCI CCTCAGC 1 cut(s) 239
BbvI GCAGC 1 cut(s) 1959
BccI CCATC 4 cut(s) 400, 880, 965, 1909
BceAI ACGGC 2 cut(s) 274, 1115
BciT130I CCWGG 2 cut(s) 1283, 1629
BclI TGATCA 1 cut(s) 1336
BcoDI GTCTC 4 cut(s) 1197, 1231, 1397, 1703
BcuI ACTAGT 2 cut(s) 946, 1034
BfaI CTAG 8 cut(s) 783, 947, 1035, 1185, 1422, 1436, 1851, 2002
BfmI CTRYAG 2 cut(s) 271, 1594
BglII AGATCT 1 cut(s) 331
BisI GCNGC 1 cut(s) 1948
BlsI GCNGC 1 cut(s) 1949
BmcAI AGTACT 2 cut(s) 118, 889
Bme1390I CCNGG 2 cut(s) 1283, 1629
BmiI GGNNCC 5 cut(s) 852, 1129, 1531, 1548, 1875
BmrFI CCNGG 2 cut(s) 1283, 1629
BmsI GCATC 4 cut(s) 334, 1429, 1760, 1782
BmtI GCTAGC 1 cut(s) 1425
BpiI GAAGAC 1 cut(s) 212
BpmI CTGGAG 2 cut(s) 666, 1533
Bpu10I CCTNAGC 2 cut(s) 239, 608
Bpu14I TTCGAA 1 cut(s) 1718
BsaAI YACGTR 1 cut(s) 152
BsaBI GATNNNNATC 2 cut(s) 648, 1938
BsaI GGTCTC 1 cut(s) 1231
BsaJI CCNNGG 4 cut(s) 361, 696, 899, 1095
BsaWI WCCGGW 1 cut(s) 1870
BsaXI ACNNNNNCTCC 2 cut(s) 1049, 1079
Bsc4I CCNNNNNNNGG 2 cut(s) 830, 875
Bse1I ACTGG 3 cut(s) 114, 852, 1703
Bse3DI GCAATG 3 cut(s) 102, 250, 709
Bse8I GATNNNNATC 2 cut(s) 648, 1938
BseAI TCCGGA 1 cut(s) 1870
BseBI CCWGG 2 cut(s) 1283, 1629
BseDI CCNNGG 4 cut(s) 361, 696, 899, 1095
BseGI GGATG 1 cut(s) 1773
BseJI GATNNNNATC 2 cut(s) 648, 1938
BseLI CCNNNNNNNGG 2 cut(s) 830, 875
BseMI GCAATG 3 cut(s) 102, 250, 709
BseMII CTCAG 3 cut(s) 253, 962, 1408
BseNI ACTGG 3 cut(s) 114, 852, 1703
BseRI GAGGAG 4 cut(s) 224, 227, 342, 1986
BseSI GKGCMC 1 cut(s) 680
BseXI GCAGC 1 cut(s) 1959
BsgI GTGCAG 2 cut(s) 1059, 1179
Bsh1285I CGRYCG 1 cut(s) 831
BshFI GGCC 3 cut(s) 666, 1632, 1819
BshNI GGYRCC 2 cut(s) 850, 1127
BsiEI CGRYCG 1 cut(s) 831
BsiHKAI GWGCWC 1 cut(s) 680
BsiSI CCGG 2 cut(s) 824, 1871
BslFI GGGAC 1 cut(s) 1304
BslI CCNNNNNNNGG 2 cut(s) 830, 875
BsmAI GTCTC 4 cut(s) 1197, 1231, 1397, 1703
BsmBI CGTCTC 1 cut(s) 1397
BsmFI GGGAC 1 cut(s) 1304
BsnI GGCC 3 cut(s) 666, 1632, 1819
Bso31I GGTCTC 1 cut(s) 1231
Bsp119I TTCGAA 1 cut(s) 1718
Bsp1286I GDGCHC 1 cut(s) 680
Bsp13I TCCGGA 1 cut(s) 1870
BspACI CCGC 1 cut(s) 454
BspANI GGCC 3 cut(s) 666, 1632, 1819
BspCNI CTCAG 3 cut(s) 252, 963, 1407
BspEI TCCGGA 1 cut(s) 1870
BspHI TCATGA 1 cut(s) 558
BspLI GGNNCC 5 cut(s) 852, 1129, 1531, 1548, 1875
BspOI GCTAGC 1 cut(s) 1425
BspPI GGATC 4 cut(s) 815, 841, 1578, 1680
BspT104I TTCGAA 1 cut(s) 1718
BspT107I GGYRCC 2 cut(s) 850, 1127
BspTNI GGTCTC 1 cut(s) 1231
BsrDI GCAATG 3 cut(s) 102, 250, 709
BsrI ACTGG 3 cut(s) 114, 852, 1703
BssECI CCNNGG 4 cut(s) 361, 696, 899, 1095
BssT1I CCWWGG 3 cut(s) 361, 696, 899
Bst2UI CCWGG 2 cut(s) 1283, 1629
Bst4CI ACNGT 6 cut(s) 275, 281, 287, 567, 722, 746
Bst6I CTCTTC 5 cut(s) 818, 878, 977, 1701, 1872
BstAPI GCANNNNNTGC 2 cut(s) 357, 711
BstBAI YACGTR 1 cut(s) 152
BstBI TTCGAA 1 cut(s) 1718
BstC8I GCNNGC 5 cut(s) 349, 358, 1149, 1423, 1887
BstDEI CTNAG 8 cut(s) 239, 578, 608, 794, 971, 1270, 1394, 1679
BstF5I GGATG 1 cut(s) 1773
BstHHI GCGC 2 cut(s) 444, 673
BstMAI GTCTC 4 cut(s) 1197, 1231, 1397, 1703
BstMCI CGRYCG 1 cut(s) 831
BstMWI GCNNNNNNNGC 4 cut(s) 353, 357, 441, 711
BstNI CCWGG 2 cut(s) 1283, 1629
BstNSI RCATGY 3 cut(s) 162, 439, 967
BstSCI CCNGG 2 cut(s) 1281, 1627
BstSFI CTRYAG 2 cut(s) 271, 1594
BstSLI GKGCMC 1 cut(s) 680
BstV1I GCAGC 1 cut(s) 1959
BstV2I GAAGAC 1 cut(s) 212
BstX2I RGATCY 3 cut(s) 331, 1583, 1672
BstYI RGATCY 3 cut(s) 331, 1583, 1672
BsuRI GGCC 3 cut(s) 666, 1632, 1819
BtsCI GGATG 1 cut(s) 1773
BtsI GCAGTG 3 cut(s) 358, 680, 1176
BtsIMutI CAGTG 7 cut(s) 358, 537, 563, 680, 727, 845, 1176
Cac8I GCNNGC 5 cut(s) 349, 358, 1149, 1423, 1887
CaiI CAGNNNCTG 1 cut(s) 279
CciI TCATGA 1 cut(s) 558
CfoI GCGC 2 cut(s) 444, 673
Csp6I GTAC 6 cut(s) 117, 888, 944, 1502, 1625, 1688
CviAII CATG 8 cut(s) 159, 436, 559, 964, 1409, 1655, 1737, 1912
CviQI GTAC 6 cut(s) 117, 888, 944, 1502, 1625, 1688
DdeI CTNAG 8 cut(s) 239, 578, 608, 794, 971, 1270, 1394, 1679
DraI TTTAAA 1 cut(s) 1216
EaeI YGGCCR 1 cut(s) 1630
Eam1104I CTCTTC 5 cut(s) 818, 878, 977, 1701, 1872
EarI CTCTTC 5 cut(s) 818, 878, 977, 1701, 1872
Eco130I CCWWGG 3 cut(s) 361, 696, 899
Eco31I GGTCTC 1 cut(s) 1231
Eco57I CTGAAG 2 cut(s) 954, 1023
EcoRI GAATTC 1 cut(s) 502
EcoRII CCWGG 2 cut(s) 1281, 1627
EcoT14I CCWWGG 3 cut(s) 361, 696, 899
EcoT22I ATGCAT 1 cut(s) 1775
ErhI CCWWGG 3 cut(s) 361, 696, 899
Esp3I CGTCTC 1 cut(s) 1397
FaeI CATG 8 cut(s) 162, 439, 562, 967, 1412, 1658, 1740, 1915
FaqI GGGAC 1 cut(s) 1304
FatI CATG 8 cut(s) 158, 435, 558, 963, 1408, 1654, 1736, 1911
FbaI TGATCA 1 cut(s) 1336
FblI GTMKAC 1 cut(s) 198
Fnu4HI GCNGC 1 cut(s) 1948
FokI GGATG 1 cut(s) 1760
Fsp4HI GCNGC 1 cut(s) 1948
FspBI CTAG 8 cut(s) 783, 947, 1035, 1185, 1422, 1436, 1851, 2002
FspI TGCGCA 1 cut(s) 672
GlaI GCGC 2 cut(s) 443, 672
GluI GCNGC 1 cut(s) 1948
GsuI CTGGAG 2 cut(s) 666, 1533
HaeIII GGCC 3 cut(s) 666, 1632, 1819
HapII CCGG 2 cut(s) 824, 1871
HhaI GCGC 2 cut(s) 444, 673
Hin1II CATG 8 cut(s) 162, 439, 562, 967, 1412, 1658, 1740, 1915
Hin6I GCGC 2 cut(s) 442, 671
HinP1I GCGC 2 cut(s) 442, 671
HincII GTYRAC 2 cut(s) 250, 307
HindII GTYRAC 2 cut(s) 250, 307
HindIII AAGCTT 3 cut(s) 1106, 1145, 1241
HinfI GANTC 6 cut(s) 468, 644, 761, 1064, 1190, 1385
HpaI GTTAAC 1 cut(s) 307
HpaII CCGG 2 cut(s) 824, 1871
HphI GGTGA 3 cut(s) 299, 1397, 1769
Hpy166II GTNNAC 8 cut(s) 33, 199, 250, 307, 678, 693, 1135, 1568
Hpy8I GTNNAC 8 cut(s) 33, 199, 250, 307, 678, 693, 1135, 1568
HpyAV CCTTC 5 cut(s) 237, 1280, 1385, 1652, 1919
HpyCH4III ACNGT 6 cut(s) 275, 281, 287, 567, 722, 746
HpyCH4IV ACGT 3 cut(s) 151, 513, 1428
HpyF10VI GCNNNNNNNGC 4 cut(s) 353, 357, 441, 711
HpyF3I CTNAG 8 cut(s) 239, 578, 608, 794, 971, 1270, 1394, 1679
HpySE526I ACGT 3 cut(s) 151, 513, 1428
Hsp92II CATG 8 cut(s) 162, 439, 562, 967, 1412, 1658, 1740, 1915
HspAI GCGC 2 cut(s) 442, 671
Kpn2I TCCGGA 1 cut(s) 1870
Ksp22I TGATCA 1 cut(s) 1336
KspAI GTTAAC 1 cut(s) 307
LmnI GCTCC 1 cut(s) 1552
Lsp1109I GCAGC 1 cut(s) 1959
LweI GCATC 4 cut(s) 334, 1429, 1760, 1782
MaeI CTAG 8 cut(s) 783, 947, 1035, 1185, 1422, 1436, 1851, 2002
MaeII ACGT 3 cut(s) 151, 513, 1428
MaeIII GTNAC 5 cut(s) 96, 275, 281, 365, 637
MflI RGATCY 3 cut(s) 331, 1583, 1672
MhlI GDGCHC 1 cut(s) 680
MlsI TGGCCA 1 cut(s) 1632
MluNI TGGCCA 1 cut(s) 1632
MlyI GAGTC 1 cut(s) 1058
MmeI TCCRAC 3 cut(s) 321, 549, 1981
Mox20I TGGCCA 1 cut(s) 1632
Mph1103I ATGCAT 1 cut(s) 1775
MroI TCCGGA 1 cut(s) 1870
MroXI GAANNNNTTC 2 cut(s) 480, 1299
MscI TGGCCA 1 cut(s) 1632
MseI TTAA 5 cut(s) 306, 716, 738, 777, 1215
MslI CAYNNNNRTG 1 cut(s) 962
Msp20I TGGCCA 1 cut(s) 1632
MspI CCGG 2 cut(s) 824, 1871
MspR9I CCNGG 2 cut(s) 1283, 1629
MvaI CCWGG 2 cut(s) 1283, 1629
MwoI GCNNNNNNNGC 4 cut(s) 353, 357, 441, 711
NheI GCTAGC 1 cut(s) 1421
NlaIII CATG 8 cut(s) 162, 439, 562, 967, 1412, 1658, 1740, 1915
NlaIV GGNNCC 5 cut(s) 852, 1129, 1531, 1548, 1875
NsbI TGCGCA 1 cut(s) 672
NsiI ATGCAT 1 cut(s) 1775
NspI RCATGY 3 cut(s) 162, 439, 967
NspV TTCGAA 1 cut(s) 1718
PagI TCATGA 1 cut(s) 558
PcsI WCGNNNNNNNCGW 1 cut(s) 524
PdmI GAANNNNTTC 2 cut(s) 480, 1299
PfeI GAWTC 5 cut(s) 468, 644, 761, 1190, 1385
PkrI GCNGC 1 cut(s) 1949
Ple19I CGATCG 1 cut(s) 831
PleI GAGTC 1 cut(s) 1058
PpsI GAGTC 1 cut(s) 1058
Ppu21I YACGTR 1 cut(s) 152
PshBI ATTAAT 1 cut(s) 738
Psp1406I AACGTT 1 cut(s) 513
Psp6I CCWGG 2 cut(s) 1281, 1627
PspGI CCWGG 2 cut(s) 1281, 1627
PspN4I GGNNCC 5 cut(s) 852, 1129, 1531, 1548, 1875
PstNI CAGNNNCTG 1 cut(s) 279
PsuI RGATCY 3 cut(s) 331, 1583, 1672
PvuI CGATCG 1 cut(s) 831
RsaI GTAC 6 cut(s) 118, 889, 945, 1503, 1626, 1689
RsaNI GTAC 6 cut(s) 117, 888, 944, 1502, 1625, 1688
RseI CAYNNNNRTG 1 cut(s) 962
SaqAI TTAA 5 cut(s) 306, 716, 738, 777, 1215
SatI GCNGC 1 cut(s) 1948
ScaI AGTACT 2 cut(s) 118, 889
SchI GAGTC 1 cut(s) 1058
ScrFI CCNGG 2 cut(s) 1283, 1629
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 4 cut(s) 334, 1429, 1760, 1782
SfcI CTRYAG 2 cut(s) 271, 1594
SfuI TTCGAA 1 cut(s) 1718
SmiMI CAYNNNNRTG 1 cut(s) 962
SpeI ACTAGT 2 cut(s) 946, 1034
SsiI CCGC 1 cut(s) 454
SspI AATATT 2 cut(s) 379, 1764
SspMI CTAG 8 cut(s) 783, 947, 1035, 1185, 1422, 1436, 1851, 2002
StyD4I CCNGG 2 cut(s) 1281, 1627
StyI CCWWGG 3 cut(s) 361, 696, 899
TaaI ACNGT 6 cut(s) 275, 281, 287, 567, 722, 746
TaiI ACGT 3 cut(s) 154, 516, 1431
TaqI TCGA 6 cut(s) 500, 1056, 1519, 1718, 1903, 1942
TatI WGTACW 3 cut(s) 116, 887, 1501
TfiI GAWTC 5 cut(s) 468, 644, 761, 1190, 1385
Tru1I TTAA 5 cut(s) 306, 716, 738, 777, 1215
Tru9I TTAA 5 cut(s) 306, 716, 738, 777, 1215
TscAI CASTG 7 cut(s) 358, 537, 570, 680, 727, 852, 1176
TseI GCWGC 1 cut(s) 1947
TspDTI ATGAA 5 cut(s) 1173, 1308, 1333, 1463, 1671
TspGWI ACGGA 3 cut(s) 1705, 1822, 2000
TspRI CASTG 7 cut(s) 358, 537, 570, 680, 727, 852, 1176
VneI GTGCAC 1 cut(s) 676
VspI ATTAAT 1 cut(s) 738
XapI RAATTY 3 cut(s) 502, 1211, 1255
XbaI TCTAGA 1 cut(s) 1184
XceI RCATGY 3 cut(s) 162, 439, 967
XcmI CCANNNNNNNNNTGG 1 cut(s) 1522
XmiI GTMKAC 1 cut(s) 198
XmnI GAANNNNTTC 2 cut(s) 480, 1299
XspI CTAG 8 cut(s) 783, 947, 1035, 1185, 1422, 1436, 1851, 2002
ZrmI AGTACT 2 cut(s) 118, 889
Zsp2I ATGCAT 1 cut(s) 1775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.