MD08G1140200.v1.1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
13685350 .. 13686183
834 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1140200.v1.1.491

Sequence Viewer

Length: 834 bp
ATGGTTTCCTCAAGATTAATCAGATTATTCTTCCTTTGTACACAAATTTTGTTACTCATCATCAAAGTTAATTTCACTCAGGCCCTACTTGGACCTCGTGGTGATCCAATATCCCACTGTTCTAACGACAAAGGTAACTACACCACTGGCAGCACCTATCAAACAAACCTCAATGGTCTCCTCTTTGACTTACACTCTTACAACAACGGCTATGGATATTTCAATTCCTCCCGTGGTGAAAACATTGACAGAGTTTATACAATCGGGCTCTGTCGAGGACTAATTAGAGAGGACGTTTGCAGTATGTGCCCTACTGACGCTGAAAACTATATAAGGGAAGGTTGTCCTAATCAGGAGGCAATTGGATGGCAAAACGATTGTATGTTACGCTACTCAAACCGCTCCATATATGGCATGATGCAAACTAATCCAGATTTCTACCTGAAAAATGATGCTAATGTATCGACGGGCTTGGATGCGTTCAGTCAGGAGCGCTCTCACTTGCTTAATCGACTAGCACAAAAAACAGTAACGGGTGGTGATCTTCGTAAATTCGCAACAGGAAACGCAAGCATTCCAAGTACTGATATAACTATATATGGACTTGTTGAGTGCACCCCAGAATTATCCGAGCAAAGTTGTATTGATTTTTTAAATTATACTATCGGAGTGTTTGGATCATGTTGTAGTGCATCAATTGGTGTGAGAATTGTAACACCAAGCTGTGGCTTAAGGTACGAAAATTTCACCTTTTTTTACGATACAACTGAGACACCAACGGCCAATACTGCGATTCCAGGAGGTATTACATCTTGGCATCATTTTTCTATCTGA

Protein Analysis

278

Amino Acids

30.82

Weight (kDa)

5.52

Isoelectric Point (pI)

28.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 40 - 134 2.2e-19 Salt stress response/antifungal
Stress-antifung PF01657 157 - 248 6.8e-08 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 725
AccBSI CCGCTC 1 cut(s) 402
AciI CCGC 1 cut(s) 400
AclWI GGATC 2 cut(s) 98, 685
AcoI YGGCCR 1 cut(s) 780
AcsI RAATTY 3 cut(s) 45, 551, 742
AfaI GTAC 3 cut(s) 40, 583, 737
AfeI AGCGCT 1 cut(s) 494
AfiI CCNNNNNNNGG 1 cut(s) 725
AflII CTTAAG 1 cut(s) 730
AgsI TTSAA 1 cut(s) 223
AjnI CCWGG 1 cut(s) 796
AluBI AGCT 1 cut(s) 723
AluI AGCT 1 cut(s) 723
Alw21I GWGCWC 1 cut(s) 617
Alw26I GTCTC 2 cut(s) 182, 764
Alw44I GTGCAC 1 cut(s) 613
AlwI GGATC 2 cut(s) 98, 685
Aor51HI AGCGCT 1 cut(s) 494
AoxI GGCC 2 cut(s) 81, 780
ApaLI GTGCAC 1 cut(s) 613
ApeKI GCWGC 1 cut(s) 150
ApoI RAATTY 3 cut(s) 45, 551, 742
AseI ATTAAT 1 cut(s) 17
AspLEI GCGC 1 cut(s) 495
AspS9I GGNCC 2 cut(s) 82, 92
AsuHPI GGTGA 4 cut(s) 113, 248, 551, 739
AvaII GGWCC 1 cut(s) 92
BaeGI GKGCMC 2 cut(s) 311, 617
BanII GRGCYC 1 cut(s) 270
BauI CACGAG 1 cut(s) 96
Bbv12I GWGCWC 1 cut(s) 617
BbvI GCAGC 1 cut(s) 162
BccI CCATC 1 cut(s) 360
BceAI ACGGC 2 cut(s) 223, 795
BciT130I CCWGG 1 cut(s) 798
BcoDI GTCTC 2 cut(s) 182, 764
BfaI CTAG 1 cut(s) 515
BfoI RGCGCY 1 cut(s) 496
BfrI CTTAAG 1 cut(s) 730
BisI GCNGC 1 cut(s) 151
BlsI GCNGC 1 cut(s) 152
BmcAI AGTACT 1 cut(s) 583
Bme1390I CCNGG 1 cut(s) 798
Bme18I GGWCC 1 cut(s) 92
BmgT120I GGNCC 2 cut(s) 82, 92
BmrFI CCNGG 1 cut(s) 798
BmsI GCATC 5 cut(s) 408, 442, 466, 701, 826
BsaI GGTCTC 1 cut(s) 182
BsaJI CCNNGG 1 cut(s) 232
Bsc4I CCNNNNNNNGG 1 cut(s) 725
Bse1I ACTGG 1 cut(s) 151
BseBI CCWGG 1 cut(s) 798
BseDI CCNNGG 1 cut(s) 232
BseGI GGATG 2 cut(s) 371, 481
BseLI CCNNNNNNNGG 1 cut(s) 725
BseMII CTCAG 2 cut(s) 92, 759
BseNI ACTGG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 2 cut(s) 311, 617
BseXI GCAGC 1 cut(s) 162
BshFI GGCC 2 cut(s) 83, 782
BsiHKAI GWGCWC 1 cut(s) 617
BslI CCNNNNNNNGG 1 cut(s) 725
BsmAI GTCTC 2 cut(s) 182, 764
BsmI GAATGC 1 cut(s) 573
BsnI GGCC 2 cut(s) 83, 782
Bso31I GGTCTC 1 cut(s) 182
Bsp1286I GDGCHC 3 cut(s) 270, 311, 617
Bsp1407I TGTACA 1 cut(s) 38
Bsp143I GATC 3 cut(s) 103, 541, 677
BspACI CCGC 1 cut(s) 400
BspANI GGCC 2 cut(s) 83, 782
BspCNI CTCAG 2 cut(s) 91, 760
BspPI GGATC 2 cut(s) 98, 685
BspTI CTTAAG 1 cut(s) 730
BspTNI GGTCTC 1 cut(s) 182
BsrBI CCGCTC 1 cut(s) 402
BsrGI TGTACA 1 cut(s) 38
BsrI ACTGG 1 cut(s) 151
BssECI CCNNGG 1 cut(s) 232
BssMI GATC 3 cut(s) 103, 541, 677
BssSI CACGAG 1 cut(s) 96
Bst2BI CACGAG 1 cut(s) 96
Bst2UI CCWGG 1 cut(s) 798
Bst4CI ACNGT 2 cut(s) 119, 529
BstAFI CTTAAG 1 cut(s) 730
BstAPI GCANNNNNTGC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 571
BstDEI CTNAG 2 cut(s) 78, 768
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 2 cut(s) 371, 481
BstH2I RGCGCY 1 cut(s) 496
BstHHI GCGC 1 cut(s) 495
BstKTI GATC 3 cut(s) 106, 544, 680
BstMAI GTCTC 2 cut(s) 182, 764
BstMBI GATC 3 cut(s) 103, 541, 677
BstMWI GCNNNNNNNGC 2 cut(s) 306, 788
BstNI CCWGG 1 cut(s) 798
BstSCI CCNGG 1 cut(s) 796
BstSLI GKGCMC 2 cut(s) 311, 617
BstV1I GCAGC 1 cut(s) 162
BsuRI GGCC 2 cut(s) 83, 782
BtgI CCRYGG 1 cut(s) 232
BtsCI GGATG 2 cut(s) 371, 481
BtsIMutI CAGTG 2 cut(s) 115, 144
Cac8I GCNNGC 1 cut(s) 571
CfoI GCGC 1 cut(s) 495
Cfr13I GGNCC 2 cut(s) 82, 92
CseI GACGC 1 cut(s) 326
Csp6I GTAC 3 cut(s) 39, 582, 736
CviAII CATG 2 cut(s) 415, 681
CviJI RGCY 7 cut(s) 83, 210, 268, 471, 723, 729, 782
CviKI_1 RGCY 7 cut(s) 83, 210, 268, 471, 723, 729, 782
CviQI GTAC 3 cut(s) 39, 582, 736
DdeI CTNAG 2 cut(s) 78, 768
DpnI GATC 3 cut(s) 105, 543, 679
DpnII GATC 3 cut(s) 103, 541, 677
DraI TTTAAA 1 cut(s) 654
EaeI YGGCCR 1 cut(s) 780
Eco24I GRGCYC 1 cut(s) 270
Eco31I GGTCTC 1 cut(s) 182
Eco47I GGWCC 1 cut(s) 92
Eco47III AGCGCT 1 cut(s) 494
EcoO109I RGGNCCY 1 cut(s) 82
EcoRII CCWGG 1 cut(s) 796
EcoT38I GRGCYC 1 cut(s) 270
FaeI CATG 2 cut(s) 418, 684
FatI CATG 2 cut(s) 414, 680
Fnu4HI GCNGC 1 cut(s) 151
FokI GGATG 2 cut(s) 378, 488
FriOI GRGCYC 1 cut(s) 270
Fsp4HI GCNGC 1 cut(s) 151
FspBI CTAG 1 cut(s) 515
GlaI GCGC 1 cut(s) 494
GluI GCNGC 1 cut(s) 151
HaeII RGCGCY 1 cut(s) 496
HaeIII GGCC 2 cut(s) 83, 782
HgaI GACGC 1 cut(s) 326
HhaI GCGC 1 cut(s) 495
Hin1II CATG 2 cut(s) 418, 684
Hin6I GCGC 1 cut(s) 493
HinP1I GCGC 1 cut(s) 493
HinfI GANTC 1 cut(s) 793
HphI GGTGA 4 cut(s) 113, 248, 551, 739
Hpy166II GTNNAC 2 cut(s) 41, 615
Hpy188I TCNGA 4 cut(s) 23, 631, 668, 833
Hpy188III TCNNGA 4 cut(s) 12, 353, 431, 488
Hpy8I GTNNAC 2 cut(s) 41, 615
Hpy99I CGWCG 1 cut(s) 469
HpyAV CCTTC 1 cut(s) 332
HpyCH4III ACNGT 2 cut(s) 119, 529
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 4 cut(s) 300, 421, 615, 692
HpyF10VI GCNNNNNNNGC 2 cut(s) 306, 788
HpyF3I CTNAG 2 cut(s) 78, 768
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 2 cut(s) 418, 684
HspAI GCGC 1 cut(s) 493
Kzo9I GATC 3 cut(s) 103, 541, 677
LmnI GCTCC 2 cut(s) 407, 490
Lsp1109I GCAGC 1 cut(s) 162
LweI GCATC 5 cut(s) 408, 442, 466, 701, 826
MaeI CTAG 1 cut(s) 515
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 5 cut(s) 51, 134, 384, 529, 712
MalI GATC 3 cut(s) 105, 543, 679
MbiI CCGCTC 1 cut(s) 402
MboI GATC 3 cut(s) 103, 541, 677
MboII GAAGA 2 cut(s) 22, 536
MfeI CAATTG 2 cut(s) 360, 696
MhlI GDGCHC 3 cut(s) 270, 311, 617
MnlI CCTC 9 cut(s) 19, 105, 179, 191, 238, 269, 283, 349, 794
MseI TTAA 5 cut(s) 17, 69, 507, 653, 731
MspCI CTTAAG 1 cut(s) 730
MspR9I CCNGG 1 cut(s) 798
MunI CAATTG 2 cut(s) 360, 696
Mva1269I GAATGC 1 cut(s) 573
MvaI CCWGG 1 cut(s) 798
MwoI GCNNNNNNNGC 2 cut(s) 306, 788
NdeII GATC 3 cut(s) 103, 541, 677
NlaIII CATG 2 cut(s) 418, 684
PctI GAATGC 1 cut(s) 573
PfeI GAWTC 1 cut(s) 793
PflMI CCANNNNNTGG 1 cut(s) 725
PfoI TCCNGGA 1 cut(s) 796
PkrI GCNGC 1 cut(s) 152
PshBI ATTAAT 1 cut(s) 17
Psp6I CCWGG 1 cut(s) 796
PspGI CCWGG 1 cut(s) 796
PspPI GGNCC 2 cut(s) 82, 92
RsaI GTAC 3 cut(s) 40, 583, 737
RsaNI GTAC 3 cut(s) 39, 582, 736
SaqAI TTAA 5 cut(s) 17, 69, 507, 653, 731
SatI GCNGC 1 cut(s) 151
Sau3AI GATC 3 cut(s) 103, 541, 677
Sau96I GGNCC 2 cut(s) 82, 92
ScaI AGTACT 1 cut(s) 583
ScrFI CCNGG 1 cut(s) 798
SduI GDGCHC 3 cut(s) 270, 311, 617
SfaNI GCATC 5 cut(s) 408, 442, 466, 701, 826
SinI GGWCC 1 cut(s) 92
SmlI CTYRAG 2 cut(s) 10, 730
SmoI CTYRAG 2 cut(s) 10, 730
SsiI CCGC 1 cut(s) 400
SspMI CTAG 1 cut(s) 515
StyD4I CCNGG 1 cut(s) 796
TaaI ACNGT 2 cut(s) 119, 529
TaiI ACGT 1 cut(s) 297
TaqI TCGA 3 cut(s) 274, 464, 511
TatI WGTACW 2 cut(s) 38, 581
TfiI GAWTC 1 cut(s) 793
Tru1I TTAA 5 cut(s) 17, 69, 507, 653, 731
Tru9I TTAA 5 cut(s) 17, 69, 507, 653, 731
TscAI CASTG 2 cut(s) 122, 151
TseI GCWGC 1 cut(s) 150
TspRI CASTG 2 cut(s) 122, 151
Van91I CCANNNNNTGG 1 cut(s) 725
Vha464I CTTAAG 1 cut(s) 730
VneI GTGCAC 1 cut(s) 613
VpaK11BI GGWCC 1 cut(s) 92
VspI ATTAAT 1 cut(s) 17
XapI RAATTY 3 cut(s) 45, 551, 742
XspI CTAG 1 cut(s) 515
ZrmI AGTACT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.