Rorug06G0284100

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
43239346 .. 43257603
18258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0284100.1

Sequence Viewer

Length: 1956 bp
ATGAGCAGAACAAGCTCAGAGAGTCCCAAGCCCAATGAAGAATTTAGTTGCTCACTAGAAACAAAGGAAAAGAATCCAAAGAGAAAACGCAAAACCAATGAGAATAAAGAGCTATTGGTGGAAATAATGATGCCAGAAGCAGATCCATCTCTTCAGCCTCAGCTTGCAAAATTCTGTGAACAAAAGGTAAAGGTGGCACAACCGCTTAATACTAGTACAGAGTGGCAAGATACCAAGTTTGATGAAGTTCCTTCCTTGTCACATTTGGCTCCAAAAGCTGATACTGAAGTAATTGCTATCAGTAGAGAGGGCAGTCTTTTGCAGATGGCAAACTCTTCACCCGAAAGATGTCTTCTTAAGTGTTCTCAGAAAAAGCTTCTCATTCTCGATATTAATGGGCTGCTTGCTGATATTGTGGAAGGTTCTATCCCGAGTAGTTTTAAACCAGACAAAATCATATCACGGAAAGCAGTTTTTAAGAGGCCATTTTGCAATGATTTTATACAGTTCTGCTTTGACAGATTTGATGTGGGTGTGTGGTCTTCAAGAATCAAGAAAAATGTGGACTCGGTGATAGATGCTCTTAAAGATTTACAGACTATTCTATTCTCAATCAAATATGAATTTATCAGGCAGGTCAAGAGTCATTCAGATCCATTACACAATCCTACTATAGAGGAGCTGCTGGCGCTTTGCTTGTCTATGACATCACAAGGTGAAGGTTTTGCTTCTGGAAAAATAAGTATTGGAGAAATAGAGGGCTATGTTCTCGTGGTTCGAGAAGTAGATTTGCCAGAAACAGCTGGTGTTCAGGAGCATGTGAAGTCAGCAGCTCTTCGAGAGCCACTTGATTACACACTGGTGTGGAGCCCTGATGATGGGAATGAGGAAAGTTATGGTTCATGTGGCTACTTTTGGTTACCTGATCCACCCCAAGGTTACAGAGCAATGGGCTTTTTAGTTACCAACAAGCCAGGAAAACCTGAGTTGGATGAAGTAAGGTGTGTTAGAGCTGATTTGAATGACACATGCGAAACTCACAGCCTACTTTTTAATACCAGCATCAAATCTGCAAGTCTTCCTTTTCAAGTTTGGACTATGAGACCACGTTATCGGGGAATGATGGGGACAGGGGTCTCTGTAGATGTGGGCGAAGCAATTGATGAAAGTGGCTCAAATTTGCCTGGTGGGGGGACAAATGATAAGCAGTTTTGGATAGACTTGCCTAGTGGTGATCGAAGAAAGAATGTGATATATGGAAACTTGGAAAGTGCAAAACTCTACGTTCATGTAAAACCAGCTCTTGGTGGGACTTTTACTGACATTGCAATGTGGGTATTTTGTCCCTTTAATGGACCAGCCACTCTCGAAGTCGGACCTATGGATATCGCTCTCAGCAAGATTGGACAGCATGTGAGTGACTGGGAGCATTTCACACTCCGAATATGCAACTTTACTGGAGAGCTTTGTAGTATATACTTCTCACAGCACAGCGGTGGTCAATGGGTAGATGCATACGCTTTGGAGTACATAAGCGGGAACAAAGCCATTATCTACTCGACGAAAAATGGACATGCAAACTTCCCACATGCTGGGACTTACCTTCAGGGGTCTGCAAAGCTTGGGATTGGAATTAGGAATGATGCTGCTCGCAGTGAGTTTTCTGTGGATTCAAGCCGCCAATATGAAGTAGTTGAGGCGGAGTATCTTGGAGATGGAGTTGTTACTGAGCCAGTTGAGCTTTCTGGGGAGGAAGGTCCTACAGGACCAAAGGAGAAGAACAATTGGGAACAGACCCTTCTTCATGTTTCTTTCATCCTGCAGATCATGTTGTTTTTATATGCTTCTTTCATCCTGCAGGTCATGTTGTTTCTATATGCACGGTTTGAGAAATCATTGAACTTCAAGGCCAGCCTTGTTGTGGTTGTAACTCTCATGTATTTTTGCCATATGTAA

Protein Analysis

651

Amino Acids

72.71

Weight (kDa)

5.38

Isoelectric Point (pI)

34.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NIF PF03031 125 - 211 1.7e-08 NLI interacting factor-like phosphatase
Vps62 PF06101 252 - 381 1.2e-38 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 383 - 578 1.7e-101 Vacuolar protein sorting-associated protein 62
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 625, 1849
AccB7I CCANNNNNTGG 2 cut(s) 1304, 1592
AciI CCGC 5 cut(s) 203, 1494, 1536, 1678, 1700
AclWI GGATC 3 cut(s) 137, 647, 920
AcsI RAATTY 4 cut(s) 41, 170, 623, 1177
AcuI CTGAAG 3 cut(s) 137, 306, 1589
AdeI CACNNNGTG 1 cut(s) 716
AfaI GTAC 2 cut(s) 217, 1529
AfiI CCNNNNNNNGG 7 cut(s) 878, 935, 1190, 1304, 1352, 1592, 1921
AflII CTTAAG 1 cut(s) 356
AgsI TTSAA 6 cut(s) 546, 1021, 1088, 1674, 1900, 1906
AhlI ACTAGT 1 cut(s) 212
AjnI CCWGG 2 cut(s) 973, 1183
AleI CACNNNNGTG 3 cut(s) 860, 862, 1494
Alw26I GTCTC 2 cut(s) 1096, 1141
AlwI GGATC 3 cut(s) 137, 647, 920
Ama87I CYCGRG 1 cut(s) 430
AoxI GGCC 2 cut(s) 482, 1908
ApeKI GCWGC 4 cut(s) 400, 682, 830, 1646
ApoI RAATTY 4 cut(s) 41, 170, 623, 1177
AseI ATTAAT 1 cut(s) 393
AspLEI GCGC 1 cut(s) 691
AspS9I GGNCC 4 cut(s) 1355, 1376, 1757, 1766
AsuHPI GGTGA 4 cut(s) 330, 583, 728, 1244
AvaI CYCGRG 1 cut(s) 430
AvaII GGWCC 4 cut(s) 1355, 1376, 1757, 1766
BaeI ACNNNNGTAYC 2 cut(s) 273, 306
BanII GRGCYC 1 cut(s) 872
BauI CACGAG 1 cut(s) 770
BbsI GAAGAC 3 cut(s) 344, 534, 1070
BbvCI CCTCAGC 1 cut(s) 159
BbvI GCAGC 4 cut(s) 387, 669, 842, 1633
BccI CCATC 5 cut(s) 154, 319, 872, 1117, 1709
BciT130I CCWGG 2 cut(s) 975, 1185
BcoDI GTCTC 2 cut(s) 1096, 1141
BcuI ACTAGT 1 cut(s) 212
BfaI CTAG 3 cut(s) 56, 213, 1227
BfmI CTRYAG 5 cut(s) 672, 1140, 1761, 1820, 1856
BfoI RGCGCY 1 cut(s) 692
BfrI CTTAAG 1 cut(s) 356
BfuAI ACCTGC 2 cut(s) 625, 1849
BisI GCNGC 5 cut(s) 401, 683, 831, 1647, 1678
BlsI GCNGC 5 cut(s) 402, 684, 832, 1648, 1679
Bme1390I CCNGG 2 cut(s) 975, 1185
Bme18I GGWCC 4 cut(s) 1355, 1376, 1757, 1766
BmeT110I CYCGRG 1 cut(s) 430
BmgT120I GGNCC 4 cut(s) 1355, 1376, 1757, 1766
BmiI GGNNCC 2 cut(s) 270, 869
BmrFI CCNGG 2 cut(s) 975, 1185
BmrI ACTGGG 1 cut(s) 1432
BmsI GCATC 5 cut(s) 120, 568, 1071, 1501, 1633
BmuI ACTGGG 1 cut(s) 1432
BoxI GACNNNNGTC 1 cut(s) 1133
BpiI GAAGAC 3 cut(s) 344, 534, 1070
BpmI CTGGAG 1 cut(s) 1479
Bpu10I CCTNAGC 1 cut(s) 159
BsaI GGTCTC 2 cut(s) 1096, 1141
BsaJI CCNNGG 1 cut(s) 934
BsaXI ACNNNNNCTCC 2 cut(s) 1704, 1734
Bsc4I CCNNNNNNNGG 7 cut(s) 878, 935, 1190, 1304, 1352, 1592, 1921
Bse1I ACTGG 4 cut(s) 864, 1427, 1462, 1733
Bse3DI GCAATG 4 cut(s) 499, 954, 1323, 1335
BseBI CCWGG 2 cut(s) 975, 1185
BseDI CCNNGG 1 cut(s) 934
BseGI GGATG 3 cut(s) 997, 1815, 1851
BseLI CCNNNNNNNGG 7 cut(s) 878, 935, 1190, 1304, 1352, 1592, 1921
BseMI GCAATG 4 cut(s) 499, 954, 1323, 1335
BseMII CTCAG 6 cut(s) 30, 173, 380, 975, 1408, 1719
BseNI ACTGG 4 cut(s) 864, 1427, 1462, 1733
BseRI GAGGAG 1 cut(s) 692
BseXI GCAGC 4 cut(s) 387, 669, 842, 1633
BseYI CCCAGC 1 cut(s) 1592
BshFI GGCC 2 cut(s) 484, 1910
BsiHKCI CYCGRG 1 cut(s) 430
BslFI GGGAC 6 cut(s) 9, 1141, 1207, 1324, 1329, 1609
BslI CCNNNNNNNGG 7 cut(s) 878, 935, 1190, 1304, 1352, 1592, 1921
BsmAI GTCTC 2 cut(s) 1096, 1141
BsmFI GGGAC 6 cut(s) 9, 1141, 1207, 1324, 1329, 1609
BsnI GGCC 2 cut(s) 484, 1910
Bso31I GGTCTC 2 cut(s) 1096, 1141
BsoBI CYCGRG 1 cut(s) 430
Bsp1286I GDGCHC 1 cut(s) 872
Bsp143I GATC 5 cut(s) 142, 652, 925, 1234, 1824
BspACI CCGC 5 cut(s) 203, 1494, 1536, 1678, 1700
BspANI GGCC 2 cut(s) 484, 1910
BspCNI CTCAG 6 cut(s) 29, 172, 379, 976, 1407, 1720
BspLI GGNNCC 2 cut(s) 270, 869
BspMAI CTGCAG 2 cut(s) 1824, 1860
BspMI ACCTGC 2 cut(s) 625, 1849
BspPI GGATC 3 cut(s) 137, 647, 920
BspQI GCTCTTC 1 cut(s) 840
BspTI CTTAAG 1 cut(s) 356
BspTNI GGTCTC 2 cut(s) 1096, 1141
BsrDI GCAATG 4 cut(s) 499, 954, 1323, 1335
BsrI ACTGG 4 cut(s) 864, 1427, 1462, 1733
BssECI CCNNGG 1 cut(s) 934
BssMI GATC 5 cut(s) 142, 652, 925, 1234, 1824
BssSI CACGAG 1 cut(s) 770
BssT1I CCWWGG 1 cut(s) 934
Bst2BI CACGAG 1 cut(s) 770
Bst2UI CCWGG 2 cut(s) 975, 1185
Bst4CI ACNGT 2 cut(s) 507, 1884
Bst6I CTCTTC 3 cut(s) 156, 340, 840
BstAFI CTTAAG 1 cut(s) 356
BstC8I GCNNGC 5 cut(s) 165, 405, 687, 1651, 1912
BstDEI CTNAG 6 cut(s) 16, 159, 366, 984, 1394, 1728
BstEII GGTNACC 1 cut(s) 918
BstF5I GGATG 3 cut(s) 997, 1815, 1851
BstH2I RGCGCY 1 cut(s) 692
BstHHI GCGC 1 cut(s) 691
BstKTI GATC 5 cut(s) 145, 655, 928, 1237, 1827
BstMAI GTCTC 2 cut(s) 1096, 1141
BstMBI GATC 5 cut(s) 142, 652, 925, 1234, 1824
BstMWI GCNNNNNNNGC 4 cut(s) 12, 275, 688, 1738
BstNI CCWGG 2 cut(s) 975, 1185
BstNSI RCATGY 5 cut(s) 821, 1032, 1415, 1577, 1592
BstPAI GACNNNNGTC 1 cut(s) 1133
BstPI GGTNACC 1 cut(s) 918
BstSCI CCNGG 2 cut(s) 973, 1183
BstSFI CTRYAG 5 cut(s) 672, 1140, 1761, 1820, 1856
BstV1I GCAGC 4 cut(s) 387, 669, 842, 1633
BstV2I GAAGAC 3 cut(s) 344, 534, 1070
BstX2I RGATCY 2 cut(s) 142, 652
BstYI RGATCY 2 cut(s) 142, 652
BsuRI GGCC 2 cut(s) 484, 1910
BtsCI GGATG 3 cut(s) 997, 1815, 1851
BtsI GCAGTG 1 cut(s) 1660
BtsIMutI CAGTG 2 cut(s) 857, 1660
BveI ACCTGC 2 cut(s) 625, 1849
Cac8I GCNNGC 5 cut(s) 165, 405, 687, 1651, 1912
CfoI GCGC 1 cut(s) 691
Cfr13I GGNCC 4 cut(s) 1355, 1376, 1757, 1766
Csp6I GTAC 2 cut(s) 216, 1528
CviQI GTAC 2 cut(s) 216, 1528
DdeI CTNAG 6 cut(s) 16, 159, 366, 984, 1394, 1728
DpnI GATC 5 cut(s) 144, 654, 927, 1236, 1826
DpnII GATC 5 cut(s) 142, 652, 925, 1234, 1824
DraI TTTAAA 1 cut(s) 442
DraIII CACNNNGTG 1 cut(s) 716
Eam1104I CTCTTC 3 cut(s) 156, 340, 840
EarI CTCTTC 3 cut(s) 156, 340, 840
EciI GGCGGA 1 cut(s) 1715
Eco130I CCWWGG 1 cut(s) 934
Eco24I GRGCYC 1 cut(s) 872
Eco31I GGTCTC 2 cut(s) 1096, 1141
Eco32I GATATC 1 cut(s) 1387
Eco47I GGWCC 4 cut(s) 1355, 1376, 1757, 1766
Eco57I CTGAAG 3 cut(s) 137, 306, 1589
Eco88I CYCGRG 1 cut(s) 430
Eco91I GGTNACC 1 cut(s) 918
EcoO109I RGGNCCY 1 cut(s) 1757
EcoO65I GGTNACC 1 cut(s) 918
EcoRII CCWGG 2 cut(s) 973, 1183
EcoRV GATATC 1 cut(s) 1387
EcoT14I CCWWGG 1 cut(s) 934
EcoT22I ATGCAT 1 cut(s) 1516
EcoT38I GRGCYC 1 cut(s) 872
ErhI CCWWGG 1 cut(s) 934
FalI AAGNNNNNCTT 2 cut(s) 1066, 1098
FaqI GGGAC 6 cut(s) 9, 1141, 1207, 1324, 1329, 1609
FauI CCCGC 1 cut(s) 1529
FauNDI CATATG 1 cut(s) 1950
Fnu4HI GCNGC 5 cut(s) 401, 683, 831, 1647, 1678
FokI GGATG 3 cut(s) 1004, 1802, 1838
FriOI GRGCYC 1 cut(s) 872
Fsp4HI GCNGC 5 cut(s) 401, 683, 831, 1647, 1678
FspBI CTAG 3 cut(s) 56, 213, 1227
GlaI GCGC 1 cut(s) 690
GluI GCNGC 5 cut(s) 401, 683, 831, 1647, 1678
GsaI CCCAGC 1 cut(s) 1596
GsuI CTGGAG 1 cut(s) 1479
HaeII RGCGCY 1 cut(s) 692
HaeIII GGCC 2 cut(s) 484, 1910
HhaI GCGC 1 cut(s) 691
Hin6I GCGC 1 cut(s) 689
HinP1I GCGC 1 cut(s) 689
HindIII AAGCTT 2 cut(s) 374, 1619
HinfI GANTC 6 cut(s) 22, 73, 549, 566, 643, 1670
HphI GGTGA 4 cut(s) 330, 583, 728, 1244
Hpy166II GTNNAC 2 cut(s) 179, 565
Hpy188I TCNGA 5 cut(s) 19, 369, 652, 1376, 1442
Hpy8I GTNNAC 2 cut(s) 179, 565
Hpy99I CGWCG 1 cut(s) 1564
HpyAV CCTTC 6 cut(s) 261, 413, 713, 1613, 1748, 1808
HpyCH4III ACNGT 2 cut(s) 507, 1884
HpyCH4IV ACGT 2 cut(s) 1108, 1284
HpyF10VI GCNNNNNNNGC 4 cut(s) 12, 275, 688, 1738
HpyF3I CTNAG 6 cut(s) 16, 159, 366, 984, 1394, 1728
HpySE526I ACGT 2 cut(s) 1108, 1284
HspAI GCGC 1 cut(s) 689
Kzo9I GATC 5 cut(s) 142, 652, 925, 1234, 1824
LguI GCTCTTC 1 cut(s) 840
LmnI GCTCC 5 cut(s) 274, 679, 814, 867, 1426
Lsp1109I GCAGC 4 cut(s) 387, 669, 842, 1633
LweI GCATC 5 cut(s) 120, 568, 1071, 1501, 1633
MaeI CTAG 3 cut(s) 56, 213, 1227
MaeII ACGT 2 cut(s) 1108, 1284
MaeIII GTNAC 7 cut(s) 258, 918, 938, 961, 1418, 1723, 1927
MalI GATC 5 cut(s) 144, 654, 927, 1236, 1826
MboI GATC 5 cut(s) 142, 652, 925, 1234, 1824
MfeI CAATTG 2 cut(s) 1158, 1783
MflI RGATCY 2 cut(s) 142, 652
MhlI GDGCHC 1 cut(s) 872
MluCI AATT 8 cut(s) 41, 170, 291, 623, 1158, 1177, 1632, 1783
MlyI GAGTC 3 cut(s) 31, 560, 652
MmeI TCCRAC 2 cut(s) 969, 1354
MnlI CCTC 8 cut(s) 168, 301, 474, 670, 751, 880, 1690, 1744
Mph1103I ATGCAT 1 cut(s) 1516
MseI TTAA 8 cut(s) 207, 357, 393, 441, 477, 585, 1053, 1350
MslI CAYNNNNRTG 5 cut(s) 860, 862, 1328, 1416, 1494
MspA1I CMGCKG 2 cut(s) 803, 1494
MspCI CTTAAG 1 cut(s) 356
MspR9I CCNGG 2 cut(s) 975, 1185
MunI CAATTG 2 cut(s) 1158, 1783
MvaI CCWGG 2 cut(s) 975, 1185
MwoI GCNNNNNNNGC 4 cut(s) 12, 275, 688, 1738
NdeI CATATG 1 cut(s) 1950
NdeII GATC 5 cut(s) 142, 652, 925, 1234, 1824
NlaIV GGNNCC 2 cut(s) 270, 869
NmuCI GTSAC 2 cut(s) 258, 1418
NsiI ATGCAT 1 cut(s) 1516
NspI RCATGY 5 cut(s) 821, 1032, 1415, 1577, 1592
OliI CACNNNNGTG 3 cut(s) 860, 862, 1494
PciSI GCTCTTC 1 cut(s) 840
PfeI GAWTC 3 cut(s) 73, 549, 1670
PflMI CCANNNNNTGG 2 cut(s) 1304, 1592
PkrI GCNGC 5 cut(s) 402, 684, 832, 1648, 1679
PleI GAGTC 3 cut(s) 30, 560, 651
PpsI GAGTC 3 cut(s) 30, 560, 651
PpuMI RGGWCCY 1 cut(s) 1757
PshAI GACNNNNGTC 1 cut(s) 1133
PshBI ATTAAT 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 1757
Psp6I CCWGG 2 cut(s) 973, 1183
PspEI GGTNACC 1 cut(s) 918
PspFI CCCAGC 1 cut(s) 1592
PspGI CCWGG 2 cut(s) 973, 1183
PspN4I GGNNCC 2 cut(s) 270, 869
PspPI GGNCC 4 cut(s) 1355, 1376, 1757, 1766
PspPPI RGGWCCY 1 cut(s) 1757
PstI CTGCAG 2 cut(s) 1824, 1860
PsuI RGATCY 2 cut(s) 142, 652
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 2 cut(s) 217, 1529
RsaNI GTAC 2 cut(s) 216, 1528
RseI CAYNNNNRTG 5 cut(s) 860, 862, 1328, 1416, 1494
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 8 cut(s) 207, 357, 393, 441, 477, 585, 1053, 1350
SatI GCNGC 5 cut(s) 401, 683, 831, 1647, 1678
Sau3AI GATC 5 cut(s) 142, 652, 925, 1234, 1824
Sau96I GGNCC 4 cut(s) 1355, 1376, 1757, 1766
SbfI CCTGCAGG 1 cut(s) 1860
SchI GAGTC 3 cut(s) 31, 560, 652
ScrFI CCNGG 2 cut(s) 975, 1185
SdaI CCTGCAGG 1 cut(s) 1860
SduI GDGCHC 1 cut(s) 872
SfaNI GCATC 5 cut(s) 120, 568, 1071, 1501, 1633
SfcI CTRYAG 5 cut(s) 672, 1140, 1761, 1820, 1856
SinI GGWCC 4 cut(s) 1355, 1376, 1757, 1766
SmiMI CAYNNNNRTG 5 cut(s) 860, 862, 1328, 1416, 1494
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
SpeI ACTAGT 1 cut(s) 212
Sse8387I CCTGCAGG 1 cut(s) 1860
Sse9I AATT 8 cut(s) 41, 170, 291, 623, 1158, 1177, 1632, 1783
SsiI CCGC 5 cut(s) 203, 1494, 1536, 1678, 1700
SspMI CTAG 3 cut(s) 56, 213, 1227
StyD4I CCNGG 2 cut(s) 973, 1183
StyI CCWWGG 1 cut(s) 934
TaaI ACNGT 2 cut(s) 507, 1884
TaiI ACGT 2 cut(s) 1111, 1287
TaqI TCGA 6 cut(s) 387, 778, 838, 1237, 1368, 1559
TasI AATT 8 cut(s) 41, 170, 291, 623, 1158, 1177, 1632, 1783
TatI WGTACW 2 cut(s) 215, 1527
TauI GCSGC 1 cut(s) 1680
TfiI GAWTC 3 cut(s) 73, 549, 1670
Tru1I TTAA 8 cut(s) 207, 357, 393, 441, 477, 585, 1053, 1350
Tru9I TTAA 8 cut(s) 207, 357, 393, 441, 477, 585, 1053, 1350
TscAI CASTG 2 cut(s) 864, 1660
TseFI GTSAC 2 cut(s) 258, 1418
TseI GCWGC 4 cut(s) 400, 682, 830, 1646
Tsp45I GTSAC 2 cut(s) 258, 1418
TspGWI ACGGA 1 cut(s) 478
TspRI CASTG 2 cut(s) 864, 1660
Van91I CCANNNNNTGG 2 cut(s) 1304, 1592
Vha464I CTTAAG 1 cut(s) 356
VpaK11BI GGWCC 4 cut(s) 1355, 1376, 1757, 1766
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 4 cut(s) 41, 170, 623, 1177
XceI RCATGY 5 cut(s) 821, 1032, 1415, 1577, 1592
XcmI CCANNNNNNNNNTGG 1 cut(s) 1918
XspI CTAG 3 cut(s) 56, 213, 1227
Zsp2I ATGCAT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.