FvH4_3g19870

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
13016615 .. 13023539
6925 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19870.t2

Sequence Viewer

Length: 2076 bp
ATGGGATCCTCAGTATGGCTGCTTCTGTTCTACTTCTTCATTTCCATGACCTTACACCACCTTGTTGCTGATGACATATTCAAAGGTGACGTCTCATGCACTTCCGCAGCTGAATTTTGTTGGAGCTGTGCCGGTACGAGTAACTACACTAATGGCAGCATCTACCAACAAAACCTCATCAGTCTTCTCTCCTCCTTTTCCAACATTTCCCAAAACCAAGCCAACTATGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATTGCGTTGTGCAGAGGAGACCGCGGACTCGAAGAGTGTAGCACCTGCCTCAGAGAGTCCACACAGTCTCTCCTGCGAAACTGTTCATATAAAAGGGAAGCAATCTTTTGGGCAGAGCCTTGCATGGTACGGTACTCGCAAGACTTGATATTTGGTATAGAGGATGAGGAGCCTCATATATATCTGCCCAGCCCGAACAACGCATTAAACCCGGAAGCGTACGGGCTGGTGCTTAACCCCTTGTTGGAAATCTTAATTGAAAAAGCTGCTTCAGGGGATTCTAATCAAAAATATGCAGCAGGACATAAAACTGTTCCGGGATACGAAACGATATATGCACATGCGCAGTGCACTCCAGACTTAGACAAAGTCATTTGCAGCGATTGCCTTAAGAATTGCACCTCTGCTCTTCCATCATGCTGCAGTGGAAAGTCAGGAACAAGAGTTCTTAAACCAAGTTGCAATATTAGGTTTGAGTACAATCTTTTCTACAAGTCTACGGTCGATAAAGAAGTAGATATTTCAGCTGCGGCTCCAGCTCCAGCTACAACAACAACTTCAGAAACTCCTGCTCCACTTCCACCTAGGCAAGGAAAGAAGAATAACACAAAAAATCATATCATCATTATAGTTGTGGTTGTGATTGCTTTTGTGTCTTTGCTTCTTGGTGGCTTGTGCATTTTCAAAAGAGACAAGAAGCCAAGGGTAAAACTTGACGTTATACCTTCAGATGATAGTTTGGAAGATATTAGCTTGGTGGAATCGTTACAATATGACTTTGAAGACATAAGATCTGCAACGAATGACTTCTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAGGCTATATAATGGACAATATATAGCTGTAAAAAGATTGTCTAAGAGTTCTGAACAGGGTGATCGTGAATTTAAAAATGAGGTAATGTTGGTTGCTCAACTGCAACACCGGAACTTAGTAAGGATATTAGGCTTTTGCTTAAAAGGAGAAGAAAGGCTCCTCATTTACGAATATATACCTAATACAAGTCTCGATCACTTCATTTTTGATCCAATCAATTATGGATATTTGGATTGGGAAACACGTTACAAGATCATAGGGGGAATTGTTCGTGGTCTTCTTTACCTTCATGAAGATTCTCGACTTCGAATTATTCACCGCGATCTCAAAGCTAGCAACATTTTGTTGGATGAAAATATGAACCCCAAAATTGCAGATTTTGGGATGGCAAGGTTGTTTGTCATGGATCAAACCCAAGGAGATACAAAGACCATCGTTGGGACCTTTGGGTACATGGCACCGGAATATGCAAGTCAAGGGCGGTTTTCTGTCAAGTCAGATGTGTTCAGTTTTGGTGTGTTACTTCTCGAAATGATTATTGGCAAGAAGAGTTCTAATTTCCAGAATGGTGAGGATGAAGATGACCTTGTAAGCTATGTATGGAGAAATTGGAGGGATGATACAATTTCAAATATCATAGATCCCATGTTAACAACAGGCTCAAGATCTGAAATAATCAGATGCATCCACATTGGTTTGTTATGTATCCAAGAAAATGTGAATGACAGACCAACCATGACTTCAGTTGCTTCCATGCTGAGTAGTCATTCCCTCTCACTCCCAGTACCTCCACGACCTGGACATTATTGGCATTATAACACTAATTCAGACACATCCGGGTCGGAGTTCAAACTCACTGAGACGTCTGAGAGATCTGAAAGTTCTGTGTTTGTGTCAAGAAGCGTGGTTTCAGATATTACTGAAATATATCCACGCTAG

Protein Analysis

692

Amino Acids

77.32

Weight (kDa)

5.62

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 43 - 139 8.4e-20 Salt stress response/antifungal
Stress-antifung PF01657 163 - 251 2e-09 Salt stress response/antifungal
Pkinase PF00069 363 - 562 1.3e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 560 9.9e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1953
AarI CACCTGC 1 cut(s) 329
AatII GACGTC 2 cut(s) 93, 2003
Acc16I TGCGCA 1 cut(s) 621
Acc36I ACCTGC 1 cut(s) 329
AccB1I GGYRCC 1 cut(s) 1594
AccB7I CCANNNNNTGG 1 cut(s) 1934
AccI GTMKAC 1 cut(s) 773
AccII CGCG 2 cut(s) 300, 1458
AciI CCGC 6 cut(s) 105, 298, 300, 806, 1456, 1618
AclWI GGATC 4 cut(s) 13, 1340, 1551, 1772
AcsI RAATTY 2 cut(s) 113, 1205
AcuI CTGAAG 4 cut(s) 531, 819, 987, 1863
AcyI GRCGYC 2 cut(s) 90, 2000
AfaI GTAC 7 cut(s) 136, 405, 410, 497, 755, 1589, 1923
AfiI CCNNNNNNNGG 5 cut(s) 15, 520, 866, 1575, 1934
AflII CTTAAG 1 cut(s) 665
AflIII ACRYGT 1 cut(s) 1379
AgsI TTSAA 6 cut(s) 82, 536, 961, 1058, 1767, 1987
AjnI CCWGG 1 cut(s) 1933
AjuI GAANNNNNNNTTGG 6 cut(s) 1086, 1118, 1659, 1691, 1861, 1893
AloI GAACNNNNNNTCC 2 cut(s) 705, 737
Alw21I GWGCWC 1 cut(s) 629
Alw26I GTCTC 6 cut(s) 97, 288, 348, 960, 1331, 1991
Alw44I GTGCAC 1 cut(s) 625
AlwI GGATC 4 cut(s) 13, 1340, 1551, 1772
ApaLI GTGCAC 1 cut(s) 625
ApeKI GCWGC 8 cut(s) 19, 107, 156, 542, 572, 654, 696, 803
ApoI RAATTY 2 cut(s) 113, 1205
ArsI GACNNNNNNTTYG 4 cut(s) 75, 107, 410, 442
Asp700I GAANNNNTTC 2 cut(s) 358, 1082
AspA2I CCTAGG 1 cut(s) 860
AspLEI GCGC 1 cut(s) 622
AspS9I GGNCC 1 cut(s) 1578
AsuC2I CCSGG 3 cut(s) 488, 594, 1975
AsuHPI GGTGA 4 cut(s) 98, 1208, 1445, 1718
AsuII TTCGAA 1 cut(s) 1444
AsuNHI GCTAGC 1 cut(s) 1469
AvaII GGWCC 1 cut(s) 1578
AvrII CCTAGG 1 cut(s) 860
BaeGI GKGCMC 1 cut(s) 629
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1594
BarI GAAGNNNNNNTAC 1 cut(s) 38
BbsI GAAGAC 3 cut(s) 176, 1065, 1406
Bbv12I GWGCWC 1 cut(s) 629
BbvI GCAGC 8 cut(s) 6, 119, 168, 529, 584, 666, 683, 790
BccI CCATC 3 cut(s) 697, 1516, 1577
BciT130I CCWGG 1 cut(s) 1935
BciVI GTATCC 2 cut(s) 590, 1853
BcnI CCSGG 3 cut(s) 488, 594, 1975
BcoDI GTCTC 6 cut(s) 97, 288, 348, 960, 1331, 1991
BfaI CTAG 3 cut(s) 861, 1470, 2074
BfmI CTRYAG 1 cut(s) 697
BfrI CTTAAG 1 cut(s) 665
BfuAI ACCTGC 1 cut(s) 329
BfuI GTATCC 2 cut(s) 590, 1853
BglII AGATCT 3 cut(s) 1067, 1802, 2009
BisI GCNGC 9 cut(s) 20, 108, 157, 543, 573, 655, 697, 804, 807
BlnI CCTAGG 1 cut(s) 860
BlsI GCNGC 9 cut(s) 21, 109, 158, 544, 574, 656, 698, 805, 808
Bme1390I CCNGG 4 cut(s) 488, 594, 1935, 1975
Bme18I GGWCC 1 cut(s) 1578
BmgT120I GGNCC 1 cut(s) 1578
BmiI GGNNCC 7 cut(s) 7, 259, 447, 810, 1295, 1579, 1596
BmrFI CCNGG 4 cut(s) 488, 594, 1935, 1975
BmrI ACTGGG 1 cut(s) 1913
BmsI GCATC 3 cut(s) 168, 1808, 1830
BmtI GCTAGC 1 cut(s) 1473
BmuI ACTGGG 1 cut(s) 1913
BpiI GAAGAC 3 cut(s) 176, 1065, 1406
BpmI CTGGAG 3 cut(s) 615, 795, 801
Bpu14I TTCGAA 1 cut(s) 1444
BpuEI CTTGAG 1 cut(s) 1783
BpuMI CCSGG 3 cut(s) 488, 594, 1975
BsaBI GATNNNNATC 1 cut(s) 558
BsaHI GRCGYC 2 cut(s) 90, 2000
BsaI GGTCTC 1 cut(s) 288
BsaJI CCNNGG 4 cut(s) 298, 860, 977, 1552
BsaWI WCCGGW 2 cut(s) 1245, 1597
BsaXI ACNNNNNCTCC 4 cut(s) 330, 360, 832, 862
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 520, 866, 1575, 1934
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 1 cut(s) 1919
Bse3DI GCAATG 1 cut(s) 276
Bse8I GATNNNNATC 1 cut(s) 558
BseBI CCWGG 1 cut(s) 1935
BseDI CCNNGG 4 cut(s) 298, 860, 977, 1552
BseGI GGATG 7 cut(s) 445, 1492, 1527, 1717, 1759, 1821, 1970
BseJI GATNNNNATC 1 cut(s) 558
BseLI CCNNNNNNNGG 5 cut(s) 15, 520, 866, 1575, 1934
BseMI GCAATG 1 cut(s) 276
BseMII CTCAG 5 cut(s) 24, 340, 1886, 1986, 1995
BseNI ACTGG 1 cut(s) 1919
BseRI GAGGAG 4 cut(s) 181, 306, 458, 1286
BseSI GKGCMC 1 cut(s) 629
BseXI GCAGC 8 cut(s) 6, 119, 168, 529, 584, 666, 683, 790
BseYI CCCAGC 1 cut(s) 464
BsgI GTGCAG 1 cut(s) 307
Bsh1236I CGCG 2 cut(s) 300, 1458
Bsh1285I CGRYCG 1 cut(s) 780
BshNI GGYRCC 1 cut(s) 1594
BsiEI CGRYCG 1 cut(s) 780
BsiHKAI GWGCWC 1 cut(s) 629
BsiSI CCGG 6 cut(s) 132, 488, 593, 1246, 1598, 1974
BsiWI CGTACG 1 cut(s) 495
BslFI GGGAC 1 cut(s) 1591
BslI CCNNNNNNNGG 5 cut(s) 15, 520, 866, 1575, 1934
BsmAI GTCTC 6 cut(s) 97, 288, 348, 960, 1331, 1991
BsmBI CGTCTC 2 cut(s) 97, 1991
BsmFI GGGAC 1 cut(s) 1591
BsmI GAATGC 1 cut(s) 277
Bso31I GGTCTC 1 cut(s) 288
Bsp119I TTCGAA 1 cut(s) 1444
Bsp1286I GDGCHC 1 cut(s) 629
BspACI CCGC 6 cut(s) 105, 298, 300, 806, 1456, 1618
BspCNI CTCAG 5 cut(s) 23, 339, 1887, 1987, 1996
BspFNI CGCG 2 cut(s) 300, 1458
BspHI TCATGA 1 cut(s) 1426
BspLI GGNNCC 7 cut(s) 7, 259, 447, 810, 1295, 1579, 1596
BspMAI CTGCAG 1 cut(s) 701
BspMI ACCTGC 1 cut(s) 329
BspOI GCTAGC 1 cut(s) 1473
BspPI GGATC 4 cut(s) 13, 1340, 1551, 1772
BspQI GCTCTTC 1 cut(s) 690
BspT104I TTCGAA 1 cut(s) 1444
BspT107I GGYRCC 1 cut(s) 1594
BspTI CTTAAG 1 cut(s) 665
BspTNI GGTCTC 1 cut(s) 288
BsrDI GCAATG 1 cut(s) 276
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 1 cut(s) 1919
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 4 cut(s) 298, 860, 977, 1552
BssNI GRCGYC 2 cut(s) 90, 2000
BssT1I CCWWGG 3 cut(s) 860, 977, 1552
Bst2UI CCWGG 1 cut(s) 1935
Bst4CI ACNGT 5 cut(s) 342, 359, 408, 589, 778
Bst6I CTCTTC 4 cut(s) 247, 303, 690, 1679
BstACI GRCGYC 2 cut(s) 90, 2000
BstAFI CTTAAG 1 cut(s) 665
BstAPI GCANNNNNTGC 1 cut(s) 660
BstBI TTCGAA 1 cut(s) 1444
BstC8I GCNNGC 1 cut(s) 1471
BstDEI CTNAG 8 cut(s) 10, 326, 637, 1179, 1252, 1895, 1995, 2004
BstDSI CCRYGG 1 cut(s) 298
BstENI CCTNNNNNAGG 1 cut(s) 864
BstF5I GGATG 7 cut(s) 445, 1492, 1527, 1717, 1759, 1821, 1970
BstFNI CGCG 2 cut(s) 300, 1458
BstHHI GCGC 1 cut(s) 622
BstMAI GTCTC 6 cut(s) 97, 288, 348, 960, 1331, 1991
BstMCI CGRYCG 1 cut(s) 780
BstMWI GCNNNNNNNGC 2 cut(s) 660, 812
BstNI CCWGG 1 cut(s) 1935
BstNSI RCATGY 1 cut(s) 620
BstSCI CCNGG 4 cut(s) 486, 592, 1933, 1973
BstSFI CTRYAG 1 cut(s) 697
BstSLI GKGCMC 1 cut(s) 629
BstUI CGCG 2 cut(s) 300, 1458
BstV1I GCAGC 8 cut(s) 6, 119, 168, 529, 584, 666, 683, 790
BstV2I GAAGAC 3 cut(s) 176, 1065, 1406
BstX2I RGATCY 5 cut(s) 5, 1067, 1777, 1802, 2009
BstYI RGATCY 5 cut(s) 5, 1067, 1777, 1802, 2009
BsuI GTATCC 2 cut(s) 590, 1853
BtgI CCRYGG 1 cut(s) 298
BtsCI GGATG 7 cut(s) 445, 1492, 1527, 1717, 1759, 1821, 1970
BtsI GCAGTG 2 cut(s) 629, 706
BtsIMutI CAGTG 3 cut(s) 629, 706, 1992
BveI ACCTGC 1 cut(s) 329
Cac8I GCNNGC 1 cut(s) 1471
CciI TCATGA 1 cut(s) 1426
CfoI GCGC 1 cut(s) 622
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 1 cut(s) 1578
Cfr42I CCGCGG 1 cut(s) 301
Csp6I GTAC 7 cut(s) 135, 404, 409, 496, 754, 1588, 1922
CspCI CAANNNNNGTGG 2 cut(s) 2022, 2057
CviQI GTAC 7 cut(s) 135, 404, 409, 496, 754, 1588, 1922
DdeI CTNAG 8 cut(s) 10, 326, 637, 1179, 1252, 1895, 1995, 2004
DraI TTTAAA 1 cut(s) 1210
Eam1104I CTCTTC 4 cut(s) 247, 303, 690, 1679
EarI CTCTTC 4 cut(s) 247, 303, 690, 1679
Eco130I CCWWGG 3 cut(s) 860, 977, 1552
Eco31I GGTCTC 1 cut(s) 288
Eco47I GGWCC 1 cut(s) 1578
Eco57I CTGAAG 4 cut(s) 531, 819, 987, 1863
EcoNI CCTNNNNNAGG 1 cut(s) 864
EcoO109I RGGNCCY 1 cut(s) 1578
EcoRII CCWGG 1 cut(s) 1933
EcoT14I CCWWGG 3 cut(s) 860, 977, 1552
EcoT22I ATGCAT 1 cut(s) 1823
ErhI CCWWGG 3 cut(s) 860, 977, 1552
Esp3I CGTCTC 2 cut(s) 97, 1991
FalI AAGNNNNNCTT 2 cut(s) 1707, 1739
FaqI GGGAC 1 cut(s) 1591
FblI GTMKAC 1 cut(s) 773
Fnu4HI GCNGC 9 cut(s) 20, 108, 157, 543, 573, 655, 697, 804, 807
FokI GGATG 7 cut(s) 452, 1499, 1534, 1724, 1766, 1808, 1957
Fsp4HI GCNGC 9 cut(s) 20, 108, 157, 543, 573, 655, 697, 804, 807
FspBI CTAG 3 cut(s) 861, 1470, 2074
FspI TGCGCA 1 cut(s) 621
GlaI GCGC 1 cut(s) 621
GluI GCNGC 9 cut(s) 20, 108, 157, 543, 573, 655, 697, 804, 807
GsaI CCCAGC 1 cut(s) 468
GsuI CTGGAG 3 cut(s) 615, 795, 801
HapII CCGG 6 cut(s) 132, 488, 593, 1246, 1598, 1974
HhaI GCGC 1 cut(s) 622
Hin1I GRCGYC 2 cut(s) 90, 2000
Hin6I GCGC 1 cut(s) 620
HinP1I GCGC 1 cut(s) 620
HincII GTYRAC 1 cut(s) 1788
HindII GTYRAC 1 cut(s) 1788
HindIII AAGCTT 1 cut(s) 1100
HinfI GANTC 5 cut(s) 303, 332, 554, 1037, 1433
HpaI GTTAAC 1 cut(s) 1788
HpaII CCGG 6 cut(s) 132, 488, 593, 1246, 1598, 1974
HphI GGTGA 4 cut(s) 98, 1208, 1445, 1718
Hpy166II GTNNAC 5 cut(s) 336, 627, 774, 1129, 1788
Hpy8I GTNNAC 5 cut(s) 336, 627, 774, 1129, 1788
HpyAV CCTTC 2 cut(s) 1011, 1433
HpyCH4III ACNGT 5 cut(s) 342, 359, 408, 589, 778
HpyCH4IV ACGT 4 cut(s) 90, 993, 1381, 2000
HpyF10VI GCNNNNNNNGC 2 cut(s) 660, 812
HpyF3I CTNAG 8 cut(s) 10, 326, 637, 1179, 1252, 1895, 1995, 2004
HpySE526I ACGT 4 cut(s) 90, 993, 1381, 2000
Hsp92I GRCGYC 2 cut(s) 90, 2000
HspAI GCGC 1 cut(s) 620
KspAI GTTAAC 1 cut(s) 1788
KspI CCGCGG 1 cut(s) 301
LguI GCTCTTC 1 cut(s) 690
LmnI GCTCC 8 cut(s) 123, 263, 445, 814, 820, 853, 1121, 1299
Lsp1109I GCAGC 8 cut(s) 6, 119, 168, 529, 584, 666, 683, 790
LweI GCATC 3 cut(s) 168, 1808, 1830
MaeI CTAG 3 cut(s) 861, 1470, 2074
MaeII ACGT 4 cut(s) 90, 993, 1381, 2000
MaeIII GTNAC 5 cut(s) 86, 140, 1041, 1382, 1656
MflI RGATCY 5 cut(s) 5, 1067, 1777, 1802, 2009
MhlI GDGCHC 1 cut(s) 629
MlyI GAGTC 2 cut(s) 297, 341
MmeI TCCRAC 6 cut(s) 101, 225, 285, 501, 1464, 1959
Mph1103I ATGCAT 1 cut(s) 1823
MroXI GAANNNNTTC 2 cut(s) 358, 1082
MseI TTAA 8 cut(s) 482, 510, 530, 666, 726, 1209, 1277, 1787
MslI CAYNNNNRTG 1 cut(s) 44
MspA1I CMGCKG 3 cut(s) 110, 300, 803
MspCI CTTAAG 1 cut(s) 665
MspI CCGG 6 cut(s) 132, 488, 593, 1246, 1598, 1974
MspR9I CCNGG 4 cut(s) 488, 594, 1935, 1975
Mva1269I GAATGC 1 cut(s) 277
MvaI CCWGG 1 cut(s) 1935
MvnI CGCG 2 cut(s) 300, 1458
MwoI GCNNNNNNNGC 2 cut(s) 660, 812
NciI CCSGG 3 cut(s) 488, 594, 1975
NheI GCTAGC 1 cut(s) 1469
NlaIV GGNNCC 7 cut(s) 7, 259, 447, 810, 1295, 1579, 1596
NmuCI GTSAC 1 cut(s) 86
NsbI TGCGCA 1 cut(s) 621
NsiI ATGCAT 1 cut(s) 1823
NspI RCATGY 1 cut(s) 620
NspV TTCGAA 1 cut(s) 1444
PagI TCATGA 1 cut(s) 1426
PaqCI CACCTGC 1 cut(s) 329
PciSI GCTCTTC 1 cut(s) 690
PctI GAATGC 1 cut(s) 277
PdmI GAANNNNTTC 2 cut(s) 358, 1082
PfeI GAWTC 3 cut(s) 554, 1037, 1433
Pfl23II CGTACG 1 cut(s) 495
PflFI GACNNNGTC 1 cut(s) 644
PflMI CCANNNNNTGG 1 cut(s) 1934
PfoI TCCNGGA 1 cut(s) 592
PkrI GCNGC 9 cut(s) 21, 109, 158, 544, 574, 656, 698, 805, 808
PleI GAGTC 2 cut(s) 297, 340
PpsI GAGTC 2 cut(s) 297, 340
PpuMI RGGWCCY 1 cut(s) 1578
PsiI TTATAA 1 cut(s) 1953
Psp5II RGGWCCY 1 cut(s) 1578
Psp6I CCWGG 1 cut(s) 1933
PspFI CCCAGC 1 cut(s) 464
PspGI CCWGG 1 cut(s) 1933
PspLI CGTACG 1 cut(s) 495
PspN4I GGNNCC 7 cut(s) 7, 259, 447, 810, 1295, 1579, 1596
PspPI GGNCC 1 cut(s) 1578
PspPPI RGGWCCY 1 cut(s) 1578
PstI CTGCAG 1 cut(s) 701
PsuI RGATCY 5 cut(s) 5, 1067, 1777, 1802, 2009
PsyI GACNNNGTC 1 cut(s) 644
PvuII CAGCTG 2 cut(s) 110, 803
RsaI GTAC 7 cut(s) 136, 405, 410, 497, 755, 1589, 1923
RsaNI GTAC 7 cut(s) 135, 404, 409, 496, 754, 1588, 1922
RseI CAYNNNNRTG 1 cut(s) 44
SacII CCGCGG 1 cut(s) 301
SapI GCTCTTC 1 cut(s) 690
SaqAI TTAA 8 cut(s) 482, 510, 530, 666, 726, 1209, 1277, 1787
SatI GCNGC 9 cut(s) 20, 108, 157, 543, 573, 655, 697, 804, 807
Sau96I GGNCC 1 cut(s) 1578
SchI GAGTC 2 cut(s) 297, 341
ScrFI CCNGG 4 cut(s) 488, 594, 1935, 1975
SduI GDGCHC 1 cut(s) 629
SfaNI GCATC 3 cut(s) 168, 1808, 1830
SfcI CTRYAG 1 cut(s) 697
Sfr303I CCGCGG 1 cut(s) 301
SfuI TTCGAA 1 cut(s) 1444
SgrBI CCGCGG 1 cut(s) 301
SinI GGWCC 1 cut(s) 1578
SmiMI CAYNNNNRTG 1 cut(s) 44
SmlI CTYRAG 2 cut(s) 665, 1798
SmoI CTYRAG 2 cut(s) 665, 1798
SsiI CCGC 6 cut(s) 105, 298, 300, 806, 1456, 1618
SspI AATATT 1 cut(s) 742
SspMI CTAG 3 cut(s) 861, 1470, 2074
StyD4I CCNGG 4 cut(s) 486, 592, 1933, 1973
StyI CCWWGG 3 cut(s) 860, 977, 1552
TaaI ACNGT 5 cut(s) 342, 359, 408, 589, 778
TaiI ACGT 4 cut(s) 93, 996, 1384, 2003
TaqI TCGA 6 cut(s) 306, 780, 1329, 1438, 1444, 1665
TatI WGTACW 1 cut(s) 753
TauI GCSGC 1 cut(s) 809
TfiI GAWTC 3 cut(s) 554, 1037, 1433
Tru1I TTAA 8 cut(s) 482, 510, 530, 666, 726, 1209, 1277, 1787
Tru9I TTAA 8 cut(s) 482, 510, 530, 666, 726, 1209, 1277, 1787
TscAI CASTG 3 cut(s) 629, 706, 1999
TseFI GTSAC 1 cut(s) 86
TseI GCWGC 8 cut(s) 19, 107, 156, 542, 572, 654, 696, 803
Tsp45I GTSAC 1 cut(s) 86
TspDTI ATGAA 9 cut(s) 28, 351, 1107, 1327, 1415, 1443, 1503, 1511, 1728
TspRI CASTG 3 cut(s) 629, 706, 1999
Tth111I GACNNNGTC 1 cut(s) 644
Van91I CCANNNNNTGG 1 cut(s) 1934
Vha464I CTTAAG 1 cut(s) 665
VneI GTGCAC 1 cut(s) 625
VpaK11BI GGWCC 1 cut(s) 1578
XagI CCTNNNNNAGG 1 cut(s) 864
XapI RAATTY 2 cut(s) 113, 1205
XceI RCATGY 1 cut(s) 620
XcmI CCANNNNNNNNNTGG 1 cut(s) 224
XmaJI CCTAGG 1 cut(s) 860
XmiI GTMKAC 1 cut(s) 773
XmnI GAANNNNTTC 2 cut(s) 358, 1082
XspI CTAG 3 cut(s) 861, 1470, 2074
ZraI GACGTC 2 cut(s) 91, 2001
Zsp2I ATGCAT 1 cut(s) 1823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.