MD05G1337500.v1.1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
45911120 .. 45914047
2928 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1337500.v1.1.491

Sequence Viewer

Length: 2016 bp
ATGGGATCCTCAAGATCATTGCTTATCTTCATCTTTCCAATTCTTTTCAACCTTGTTCCTCCCACCACTTCCCAAAACGACGGTATCTGCACAAATAATCCTTACTACTGCTGGAAATGTTCCGATACCGGCACCTACACGCCCGGCGACATGTACCAAGATAACCTCAACAGCCTCCTCTCCTCCTTCACCACAAACACCGAAATCAGTTCTGGGTTCTACAATTTTTCCGAGGGACAAGACCCCAACAAAGTGAACGCCATTGCATTGTGCAGAGGAGACCTCTCTCAGGACGCTTGCCATACGCATCTCAATGATTCTATAAATGCTCTCTTGCAAAATTGTTCTACTCATCCAAAGGAAGCAATCATGTGGACAGAGCATTGTATGGTTCGATACTCGAACAACTTGATATTCGGAATTGAGAAAGAGGACCCTATAAAATTTGTGCCTAGCCCAAATCCTGCTAAGGATTCTGCACAGTTTAACCTGGTGCTTAACCCCTTGTTGAGTACGTTAGTTGAAAAAGCTGCATCAGGGGACTCTACTAAAAAATTTGCAGCAGGTCATGCAACTGTCCCGGGAGGTGAAACTATATATGCACTTGTCCAGTGCACTCCAGATATAAAGCAACTAAACTGCAACCATTGCCTTACAGAAGCAGTCTCAGATATTCCCGGATGTTGTGGTGGAAAGCAAGGAGGAAGAGTTCTTAAACCCAGCTGTAACCTAAGGTATGAGGTTAGTCTTTTCTATGAGTCCACATCCGATTTGCCAGTAAATATTTCATCTCCGGGTCCAGCAGCACCAGCACCCAAAGGAGCTGCAAAGAAGAGTAACACAAAAGTAATTATCATCATCGTGGTGGTCGTGGTTTTGGTCGCTTTTGTGACCATCCTCAGCAGCATATGCGTTTACTTGAGAGTGAAGAAACGAGGGGTAAAACTTGAAGTTGAAGATCAGGATAACTCAGATGAAATCAGTTTAGTGGAATCGTTGAAATATGACTATGACACTATAAGATCTGCAACGGATGACTTCTCTGATGCAAATGAGCTTGGAAGAGGTGGATTTGGAGCTGTTTACAAGGGAAGGCTACTGAATGGGCAACTTATAGCCGTAAAAAGGCTCGCTAAGAATTCTGAACAAGGCGATCGTGAATTTTCGAATGAGGTCATACTACTTGCACAGCTTCAACACCGAAATTTAGTAAGGCTCCTAGGATTTTGCTTAAAAGCAGAAGAAAGACTCCTCATTTACGAATACGTGGCAAACAAAAGTCTTGATCACTTCATTTTTGGCCCCAACAATCATATGCATTTGGATTGGGAAACACGGTACAAGATCATAGGAGGCATTGCTCGAGGGATTCTTTACCTTCACGAAGATTCTCGTGTTCGAATTATTCATCGTGATCTCAAAGCGAGCAACATTTTGTTAGATGAAGATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGATTGTTTGCTGTTGATCAAACTCAAGGAAATACAAAAGCAATTGTGGGAACCTATGGATATATGGCTCCTGAGTATGTACATCATGGGAATTTATCTGTAAAAACGGATGTCTTCAGTTTCGGCGTCCTGATTCTTGAAATTGTAAGTGGTCAAAAGATTGGTCGCTTTCGATACGGCGAGAATGAAGAGAGCCTTGTAAGCTATGCCTGGAGAAATTGGAGTGAGTCTACAATTTCAAATGTCATAGATCCCATGTTGACAACGAGTTCAAGAATCGAAACGACGAGATGCATCCACATTGGTTTACTTTGTGTACAAGAAAATGTTGTCAGCAGACCGACATCAGCTTCAGTTGTATCCATGCTTAATAGCCATTCTGTCACGCTTGCAGTACCCTCAAAACCTGCATTTCATGCGCAAAACGACAGTGGATTGATATTGGCAGAGTCTGAAGAATCCGAATCCAGTACCCCTTCGGTCTATGTGTCAAAAAATGAGCCTTCAAATATCACTGAGCCCTATGCTCGCTAG

Protein Analysis

672

Amino Acids

73.96

Weight (kDa)

5.83

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 39 - 135 6e-21 Salt stress response/antifungal
Stress-antifung PF01657 157 - 247 6.1e-13 Salt stress response/antifungal
Pkinase PF00069 349 - 612 5.7e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 613 4.1e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1902
Acc36I ACCTGC 2 cut(s) 554, 1897
AccB1I GGYRCC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 1712
AclWI GGATC 2 cut(s) 13, 1727
AcsI RAATTY 6 cut(s) 443, 554, 1138, 1160, 1204, 1573
AcuI CTGAAG 3 cut(s) 1582, 1818, 1956
AcyI GRCGYC 1 cut(s) 1608
AfaI GTAC 7 cut(s) 155, 514, 1340, 1563, 1800, 1878, 1954
AfiI CCNNNNNNNGG 2 cut(s) 289, 1125
AflIII ACRYGT 1 cut(s) 150
AjnI CCWGG 2 cut(s) 489, 1691
AloI GAACNNNNNNTCC 2 cut(s) 693, 725
AluBI AGCT 8 cut(s) 530, 723, 824, 1057, 1079, 1192, 1686, 1832
AluI AGCT 8 cut(s) 530, 723, 824, 1057, 1079, 1192, 1686, 1832
Alw21I GWGCWC 1 cut(s) 617
Alw26I GTCTC 2 cut(s) 273, 670
Alw44I GTGCAC 1 cut(s) 613
AlwI GGATC 2 cut(s) 13, 1727
AlwNI CAGNNNCTG 1 cut(s) 1934
Ama87I CYCGRG 2 cut(s) 580, 1362
AoxI GGCC 1 cut(s) 1300
ApaLI GTGCAC 1 cut(s) 613
ApeKI GCWGC 5 cut(s) 530, 560, 803, 824, 903
ApoI RAATTY 6 cut(s) 443, 554, 1138, 1160, 1204, 1573
ArsI GACNNNNNNTTYG 2 cut(s) 1630, 1662
AspA2I CCTAGG 1 cut(s) 1219
AspLEI GCGC 1 cut(s) 1903
AspS9I GGNCC 3 cut(s) 433, 797, 1301
AsuC2I CCSGG 5 cut(s) 144, 581, 582, 678, 795
AsuHPI GGTGA 2 cut(s) 181, 599
AsuII TTCGAA 2 cut(s) 1166, 1399
AvaI CYCGRG 2 cut(s) 580, 1362
AvaII GGWCC 2 cut(s) 433, 797
AvrII CCTAGG 1 cut(s) 1219
AxyI CCTNAGG 1 cut(s) 731
BaeGI GKGCMC 1 cut(s) 617
BaeI ACNNNNGTAYC 2 cut(s) 67, 100
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 1 cut(s) 2004
BauI CACGAG 1 cut(s) 1392
BbsI GAAGAC 1 cut(s) 1588
Bbv12I GWGCWC 1 cut(s) 617
BbvCI CCTCAGC 1 cut(s) 899
BbvI GCAGC 5 cut(s) 517, 572, 811, 815, 915
BccI CCATC 1 cut(s) 902
BceAI ACGGC 2 cut(s) 1103, 1675
BciT130I CCWGG 2 cut(s) 491, 1693
BciVI GTATCC 1 cut(s) 1852
BclI TGATCA 2 cut(s) 1285, 1498
BcnI CCSGG 5 cut(s) 144, 581, 582, 678, 795
BcoDI GTCTC 2 cut(s) 273, 670
BfaI CTAG 3 cut(s) 453, 1220, 2014
BfuAI ACCTGC 2 cut(s) 554, 1897
BfuI GTATCC 1 cut(s) 1852
BglII AGATCT 1 cut(s) 1022
BisI GCNGC 5 cut(s) 531, 561, 804, 825, 904
BlnI CCTAGG 1 cut(s) 1219
BlsI GCNGC 5 cut(s) 532, 562, 805, 826, 905
Bme1390I CCNGG 7 cut(s) 144, 491, 581, 582, 678, 795, 1693
Bme18I GGWCC 2 cut(s) 433, 797
BmeT110I CYCGRG 2 cut(s) 580, 1362
BmgT120I GGNCC 3 cut(s) 433, 797, 1301
BmiI GGNNCC 8 cut(s) 7, 133, 435, 798, 1217, 1303, 1534, 1551
BmrFI CCNGG 7 cut(s) 144, 491, 581, 582, 678, 795, 1693
BmsI GCATC 5 cut(s) 316, 542, 1036, 1763, 1785
BpiI GAAGAC 1 cut(s) 1588
BplI GAGNNNNNCTC 2 cut(s) 267, 299
BpmI CTGGAG 2 cut(s) 603, 1714
Bpu10I CCTNAGC 2 cut(s) 468, 899
Bpu14I TTCGAA 2 cut(s) 1166, 1399
BpuEI CTTGAG 2 cut(s) 940, 1491
BpuMI CCSGG 5 cut(s) 144, 581, 582, 678, 795
BsaAI YACGTR 1 cut(s) 1267
BsaHI GRCGYC 1 cut(s) 1608
BsaI GGTCTC 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 231, 580, 1219
BsaXI ACNNNNNCTCC 2 cut(s) 693, 723
Bsc4I CCNNNNNNNGG 2 cut(s) 289, 1125
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 3 cut(s) 610, 776, 1950
Bse21I CCTNAGG 1 cut(s) 731
Bse3DI GCAATG 4 cut(s) 17, 261, 646, 1356
BseBI CCWGG 2 cut(s) 491, 1693
BseDI CCNNGG 3 cut(s) 231, 580, 1219
BseGI GGATG 7 cut(s) 352, 686, 764, 894, 1039, 1597, 1776
BseLI CCNNNNNNNGG 2 cut(s) 289, 1125
BseMI GCAATG 4 cut(s) 17, 261, 646, 1356
BseMII CTCAG 6 cut(s) 302, 681, 913, 984, 1545, 1989
BseNI ACTGG 3 cut(s) 610, 776, 1950
BseRI GAGGAG 4 cut(s) 167, 172, 291, 1241
BseSI GKGCMC 1 cut(s) 617
BseXI GCAGC 5 cut(s) 517, 572, 811, 815, 915
BseYI CCCAGC 1 cut(s) 719
BsgI GTGCAG 3 cut(s) 73, 292, 462
Bsh1285I CGRYCG 1 cut(s) 1156
BshFI GGCC 1 cut(s) 1302
BshNI GGYRCC 1 cut(s) 131
BsiEI CGRYCG 1 cut(s) 1156
BsiHKAI GWGCWC 1 cut(s) 617
BsiHKCI CYCGRG 2 cut(s) 580, 1362
BsiSI CCGG 5 cut(s) 129, 144, 581, 678, 794
BslFI GGGAC 3 cut(s) 249, 554, 563
BslI CCNNNNNNNGG 2 cut(s) 289, 1125
BsmAI GTCTC 2 cut(s) 273, 670
BsmFI GGGAC 3 cut(s) 249, 554, 563
BsnI GGCC 1 cut(s) 1302
Bso31I GGTCTC 1 cut(s) 273
BsoBI CYCGRG 2 cut(s) 580, 1362
Bsp119I TTCGAA 2 cut(s) 1166, 1399
Bsp1286I GDGCHC 2 cut(s) 617, 2004
Bsp1407I TGTACA 2 cut(s) 1561, 1798
BspANI GGCC 1 cut(s) 1302
BspCNI CTCAG 6 cut(s) 301, 680, 912, 983, 1546, 1990
BspLI GGNNCC 8 cut(s) 7, 133, 435, 798, 1217, 1303, 1534, 1551
BspMI ACCTGC 2 cut(s) 554, 1897
BspPI GGATC 2 cut(s) 13, 1727
BspT104I TTCGAA 2 cut(s) 1166, 1399
BspT107I GGYRCC 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 273
BsrDI GCAATG 4 cut(s) 17, 261, 646, 1356
BsrFI RCCGGY 1 cut(s) 128
BsrGI TGTACA 2 cut(s) 1561, 1798
BsrI ACTGG 3 cut(s) 610, 776, 1950
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 3 cut(s) 231, 580, 1219
BssNI GRCGYC 1 cut(s) 1608
BssSI CACGAG 1 cut(s) 1392
BssT1I CCWWGG 1 cut(s) 1219
Bst2BI CACGAG 1 cut(s) 1392
Bst2UI CCWGG 2 cut(s) 491, 1693
Bst4CI ACNGT 5 cut(s) 83, 483, 577, 1338, 1913
Bst6I CTCTTC 4 cut(s) 700, 827, 1057, 1665
BstACI GRCGYC 1 cut(s) 1608
BstAPI GCANNNNNTGC 4 cut(s) 569, 648, 909, 1898
BstAUI TGTACA 2 cut(s) 1561, 1798
BstBAI YACGTR 1 cut(s) 1267
BstBI TTCGAA 2 cut(s) 1166, 1399
BstC8I GCNNGC 5 cut(s) 298, 1131, 1426, 1872, 2011
BstDEI CTNAG 9 cut(s) 288, 468, 667, 731, 899, 970, 1134, 1554, 1998
BstENI CCTNNNNNAGG 1 cut(s) 287
BstF5I GGATG 7 cut(s) 352, 686, 764, 894, 1039, 1597, 1776
BstHHI GCGC 1 cut(s) 1903
BstMAI GTCTC 2 cut(s) 273, 670
BstMCI CGRYCG 1 cut(s) 1156
BstMWI GCNNNNNNNGC 6 cut(s) 569, 648, 809, 909, 1683, 1898
BstNI CCWGG 2 cut(s) 491, 1693
BstNSI RCATGY 1 cut(s) 154
BstSCI CCNGG 7 cut(s) 142, 489, 579, 580, 676, 793, 1691
BstSLI GKGCMC 1 cut(s) 617
BstV1I GCAGC 5 cut(s) 517, 572, 811, 815, 915
BstV2I GAAGAC 1 cut(s) 1588
BstX2I RGATCY 3 cut(s) 5, 1022, 1732
BstYI RGATCY 3 cut(s) 5, 1022, 1732
Bsu36I CCTNAGG 1 cut(s) 731
BsuI GTATCC 1 cut(s) 1852
BsuRI GGCC 1 cut(s) 1302
BtsCI GGATG 7 cut(s) 352, 686, 764, 894, 1039, 1597, 1776
BtsIMutI CAGTG 3 cut(s) 617, 1918, 1995
BveI ACCTGC 2 cut(s) 554, 1897
Cac8I GCNNGC 5 cut(s) 298, 1131, 1426, 1872, 2011
CaiI CAGNNNCTG 1 cut(s) 1934
CfoI GCGC 1 cut(s) 1903
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 433, 797, 1301
Cfr9I CCCGGG 1 cut(s) 580
CseI GACGC 2 cut(s) 302, 1597
CsiI ACCWGGT 1 cut(s) 489
Csp6I GTAC 7 cut(s) 154, 513, 1339, 1562, 1799, 1877, 1953
CviAII CATG 7 cut(s) 151, 370, 569, 1568, 1738, 1846, 1898
CviQI GTAC 7 cut(s) 154, 513, 1339, 1562, 1799, 1877, 1953
DdeI CTNAG 9 cut(s) 288, 468, 667, 731, 899, 970, 1134, 1554, 1998
Eam1104I CTCTTC 4 cut(s) 700, 827, 1057, 1665
EarI CTCTTC 4 cut(s) 700, 827, 1057, 1665
Eco130I CCWWGG 1 cut(s) 1219
Eco24I GRGCYC 1 cut(s) 2004
Eco31I GGTCTC 1 cut(s) 273
Eco47I GGWCC 2 cut(s) 433, 797
Eco57I CTGAAG 3 cut(s) 1582, 1818, 1956
Eco81I CCTNAGG 1 cut(s) 731
Eco88I CYCGRG 2 cut(s) 580, 1362
EcoNI CCTNNNNNAGG 1 cut(s) 287
EcoO109I RGGNCCY 1 cut(s) 433
EcoRI GAATTC 1 cut(s) 1138
EcoRII CCWGG 2 cut(s) 489, 1691
EcoT14I CCWWGG 1 cut(s) 1219
EcoT22I ATGCAT 2 cut(s) 1320, 1778
EcoT38I GRGCYC 1 cut(s) 2004
ErhI CCWWGG 1 cut(s) 1219
FaeI CATG 7 cut(s) 154, 373, 572, 1571, 1741, 1849, 1901
FalI AAGNNNNNCTT 2 cut(s) 1662, 1694
FaqI GGGAC 3 cut(s) 249, 554, 563
FatI CATG 7 cut(s) 150, 369, 568, 1567, 1737, 1845, 1897
FauNDI CATATG 2 cut(s) 908, 1314
FbaI TGATCA 2 cut(s) 1285, 1498
FblI GTMKAC 1 cut(s) 1712
Fnu4HI GCNGC 5 cut(s) 531, 561, 804, 825, 904
FokI GGATG 7 cut(s) 339, 693, 751, 881, 1046, 1604, 1763
FriOI GRGCYC 1 cut(s) 2004
Fsp4HI GCNGC 5 cut(s) 531, 561, 804, 825, 904
FspBI CTAG 3 cut(s) 453, 1220, 2014
FspI TGCGCA 1 cut(s) 1902
GlaI GCGC 1 cut(s) 1902
GluI GCNGC 5 cut(s) 531, 561, 804, 825, 904
GsaI CCCAGC 1 cut(s) 723
GsuI CTGGAG 2 cut(s) 603, 1714
HaeIII GGCC 1 cut(s) 1302
HapII CCGG 5 cut(s) 129, 144, 581, 678, 794
HgaI GACGC 2 cut(s) 302, 1597
HhaI GCGC 1 cut(s) 1903
Hin1I GRCGYC 1 cut(s) 1608
Hin1II CATG 7 cut(s) 154, 373, 572, 1571, 1741, 1849, 1901
Hin6I GCGC 1 cut(s) 1901
HinP1I GCGC 1 cut(s) 1901
HincII GTYRAC 1 cut(s) 1743
HindII GTYRAC 1 cut(s) 1743
HpaII CCGG 5 cut(s) 129, 144, 581, 678, 794
HphI GGTGA 2 cut(s) 181, 599
Hpy99I CGWCG 2 cut(s) 83, 1771
HpyAV CCTTC 5 cut(s) 196, 1086, 1388, 1968, 1995
HpyCH4III ACNGT 5 cut(s) 83, 483, 577, 1338, 1913
HpyCH4IV ACGT 2 cut(s) 515, 1266
HpyF10VI GCNNNNNNNGC 6 cut(s) 569, 648, 809, 909, 1683, 1898
HpyF3I CTNAG 9 cut(s) 288, 468, 667, 731, 899, 970, 1134, 1554, 1998
HpySE526I ACGT 2 cut(s) 515, 1266
Hsp92I GRCGYC 1 cut(s) 1608
Hsp92II CATG 7 cut(s) 154, 373, 572, 1571, 1741, 1849, 1901
HspAI GCGC 1 cut(s) 1901
Ksp22I TGATCA 2 cut(s) 1285, 1498
LmnI GCTCC 4 cut(s) 821, 1076, 1221, 1555
Lsp1109I GCAGC 5 cut(s) 517, 572, 811, 815, 915
LweI GCATC 5 cut(s) 316, 542, 1036, 1763, 1785
MabI ACCWGGT 1 cut(s) 489
MaeI CTAG 3 cut(s) 453, 1220, 2014
MaeII ACGT 2 cut(s) 515, 1266
MaeIII GTNAC 4 cut(s) 725, 836, 889, 1864
MfeI CAATTG 1 cut(s) 1524
MflI RGATCY 3 cut(s) 5, 1022, 1732
MhlI GDGCHC 2 cut(s) 617, 2004
MlyI GAGTC 5 cut(s) 536, 767, 1242, 1718, 1940
Mph1103I ATGCAT 2 cut(s) 1320, 1778
MseI TTAA 5 cut(s) 486, 498, 714, 1232, 1851
MslI CAYNNNNRTG 3 cut(s) 312, 860, 863
MspA1I CMGCKG 1 cut(s) 723
MspI CCGG 5 cut(s) 129, 144, 581, 678, 794
MspR9I CCNGG 7 cut(s) 144, 491, 581, 582, 678, 795, 1693
MunI CAATTG 1 cut(s) 1524
MvaI CCWGG 2 cut(s) 491, 1693
MwoI GCNNNNNNNGC 6 cut(s) 569, 648, 809, 909, 1683, 1898
NciI CCSGG 5 cut(s) 144, 581, 582, 678, 795
NdeI CATATG 2 cut(s) 908, 1314
NlaIII CATG 7 cut(s) 154, 373, 572, 1571, 1741, 1849, 1901
NlaIV GGNNCC 8 cut(s) 7, 133, 435, 798, 1217, 1303, 1534, 1551
NmuCI GTSAC 2 cut(s) 889, 1864
NsbI TGCGCA 1 cut(s) 1902
NsiI ATGCAT 2 cut(s) 1320, 1778
NspI RCATGY 1 cut(s) 154
NspV TTCGAA 2 cut(s) 1166, 1399
PaeR7I CTCGAG 1 cut(s) 1362
PciI ACATGT 1 cut(s) 150
PcsI WCGNNNNNNNCGW 1 cut(s) 867
PfeI GAWTC 9 cut(s) 317, 473, 992, 1369, 1388, 1615, 1758, 1940, 1946
PfoI TCCNGGA 1 cut(s) 676
PkrI GCNGC 5 cut(s) 532, 562, 805, 826, 905
Ple19I CGATCG 1 cut(s) 1156
PleI GAGTC 5 cut(s) 536, 766, 1242, 1717, 1939
PpsI GAGTC 5 cut(s) 536, 766, 1242, 1717, 1939
Ppu21I YACGTR 1 cut(s) 1267
PpuMI RGGWCCY 1 cut(s) 433
PscI ACATGT 1 cut(s) 150
Psp5II RGGWCCY 1 cut(s) 433
Psp6I CCWGG 2 cut(s) 489, 1691
PspFI CCCAGC 1 cut(s) 719
PspGI CCWGG 2 cut(s) 489, 1691
PspN4I GGNNCC 8 cut(s) 7, 133, 435, 798, 1217, 1303, 1534, 1551
PspPI GGNCC 3 cut(s) 433, 797, 1301
PspPPI RGGWCCY 1 cut(s) 433
PspXI VCTCGAGB 1 cut(s) 1362
PstNI CAGNNNCTG 1 cut(s) 1934
PsuI RGATCY 3 cut(s) 5, 1022, 1732
PvuI CGATCG 1 cut(s) 1156
PvuII CAGCTG 1 cut(s) 723
RsaI GTAC 7 cut(s) 155, 514, 1340, 1563, 1800, 1878, 1954
RsaNI GTAC 7 cut(s) 154, 513, 1339, 1562, 1799, 1877, 1953
RseI CAYNNNNRTG 3 cut(s) 312, 860, 863
SaqAI TTAA 5 cut(s) 486, 498, 714, 1232, 1851
SatI GCNGC 5 cut(s) 531, 561, 804, 825, 904
Sau96I GGNCC 3 cut(s) 433, 797, 1301
SchI GAGTC 5 cut(s) 536, 767, 1242, 1718, 1940
ScrFI CCNGG 7 cut(s) 144, 491, 581, 582, 678, 795, 1693
SduI GDGCHC 2 cut(s) 617, 2004
SexAI ACCWGGT 1 cut(s) 489
SfaNI GCATC 5 cut(s) 316, 542, 1036, 1763, 1785
Sfr274I CTCGAG 1 cut(s) 1362
SfuI TTCGAA 2 cut(s) 1166, 1399
SinI GGWCC 2 cut(s) 433, 797
SlaI CTCGAG 1 cut(s) 1362
SmaI CCCGGG 1 cut(s) 582
SmiMI CAYNNNNRTG 3 cut(s) 312, 860, 863
SmlI CTYRAG 4 cut(s) 10, 919, 1362, 1506
SmoI CTYRAG 4 cut(s) 10, 919, 1362, 1506
SspI AATATT 1 cut(s) 784
SspMI CTAG 3 cut(s) 453, 1220, 2014
StyD4I CCNGG 7 cut(s) 142, 489, 579, 580, 676, 793, 1691
StyI CCWWGG 1 cut(s) 1219
TaaI ACNGT 5 cut(s) 83, 483, 577, 1338, 1913
TaiI ACGT 2 cut(s) 518, 1269
TaqI TCGA 7 cut(s) 394, 401, 1166, 1363, 1399, 1654, 1761
TaqII GACCGA 2 cut(s) 1837, 1951
TatI WGTACW 2 cut(s) 1561, 1798
TfiI GAWTC 9 cut(s) 317, 473, 992, 1369, 1388, 1615, 1758, 1940, 1946
Tru1I TTAA 5 cut(s) 486, 498, 714, 1232, 1851
Tru9I TTAA 5 cut(s) 486, 498, 714, 1232, 1851
TscAI CASTG 3 cut(s) 617, 1918, 2002
TseFI GTSAC 2 cut(s) 889, 1864
TseI GCWGC 5 cut(s) 530, 560, 803, 824, 903
Tsp45I GTSAC 2 cut(s) 889, 1864
TspDTI ATGAA 9 cut(s) 19, 777, 990, 1282, 1397, 1458, 1466, 1683, 1886
TspGWI ACGGA 2 cut(s) 1046, 1604
TspMI CCCGGG 1 cut(s) 580
TspRI CASTG 3 cut(s) 617, 1918, 2002
VneI GTGCAC 1 cut(s) 613
VpaK11BI GGWCC 2 cut(s) 433, 797
XagI CCTNNNNNAGG 1 cut(s) 287
XapI RAATTY 6 cut(s) 443, 554, 1138, 1160, 1204, 1573
XceI RCATGY 1 cut(s) 154
XhoI CTCGAG 1 cut(s) 1362
XmaI CCCGGG 1 cut(s) 580
XmaJI CCTAGG 1 cut(s) 1219
XmiI GTMKAC 1 cut(s) 1712
XspI CTAG 3 cut(s) 453, 1220, 2014
Zsp2I ATGCAT 2 cut(s) 1320, 1778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.