RchiOBHm_Chr5g0033861

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
27755763 .. 27756422
660 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31290

Sequence Viewer

Length: 660 bp
ATGGGATCCTCAATATGGCTGCTTCTTTTCTCCGTCGTTCATATAACCTTACACCACCTTGTTGCTCCCACCATAACCCAAACTGATGTCTTGTGCACTTCGGAAGCTGAATATTGCTGGAGATGTGCCGATTTCGGCAACTACACTAATGGCAGCATCTTCCAACAAAACCTCATCAGCCTTCTCTCCTCCTTTTCCAACACTTCCCAAAACCAAGCCAACTACGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATTGCATTGTGCAGAGGAGACCTCGGACTCGAAGGCTGTCGTAGCTGTCTCAGCGATTCCACTCAGAGTCTCATCCGAAACTGTTCCTATAAAACGGAAGCAATCTTATGGGCAGAGCCTAGCATGGTACGGTACTCTCAAGACTTAATATTTGGTATTAAGGAAGAGGATCCTGTTAGGTATCTGCCCAGCCCGAATTACGCGTCAAATGAGCAAGCATTCAGGCTGGTGCTGAACCCCTTGCTGGAAATTTTAAGTGACAAAGCTGCTTCGGGGGATTCTCGTCAAAAATATGCAGCAGGACATGCAACTGTTCCGGGATACGAAACGATATATGCACATGCGCAGTGCACTCCGGACATAGAAAAAGTCAATTGCAGTAATTGA

Protein Analysis

219

Amino Acids

24.12

Weight (kDa)

5.44

Isoelectric Point (pI)

46.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 41 - 138 1.6e-19 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 618
AccII CGCG 1 cut(s) 476
AccIII TCCGGA 1 cut(s) 628
AclWI GGATC 3 cut(s) 13, 437, 450
AcsI RAATTY 1 cut(s) 522
AfaI GTAC 2 cut(s) 402, 407
AfiI CCNNNNNNNGG 2 cut(s) 15, 517
AflIII ACRYGT 1 cut(s) 474
AluBI AGCT 3 cut(s) 107, 318, 539
AluI AGCT 3 cut(s) 107, 318, 539
Alw21I GWGCWC 2 cut(s) 98, 626
Alw26I GTCTC 3 cut(s) 285, 326, 347
Alw44I GTGCAC 2 cut(s) 94, 622
AlwI GGATC 3 cut(s) 13, 437, 450
Aor13HI TCCGGA 1 cut(s) 628
ApaLI GTGCAC 2 cut(s) 94, 622
ApeKI GCWGC 4 cut(s) 19, 153, 539, 569
ApoI RAATTY 1 cut(s) 522
ArsI GACNNNNNNTTYG 4 cut(s) 407, 439, 461, 493
Asp700I GAANNNNTTC 1 cut(s) 355
AspLEI GCGC 1 cut(s) 619
AsuC2I CCSGG 1 cut(s) 591
BaeGI GKGCMC 2 cut(s) 98, 626
BamHI GGATCC 2 cut(s) 5, 442
Bbv12I GWGCWC 2 cut(s) 98, 626
BbvI GCAGC 4 cut(s) 6, 165, 526, 581
BceAI ACGGC 1 cut(s) 241
BciVI GTATCC 1 cut(s) 587
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 3 cut(s) 285, 326, 347
BfaI CTAG 1 cut(s) 393
BfuI GTATCC 1 cut(s) 587
BisI GCNGC 4 cut(s) 20, 154, 540, 570
BlsI GCNGC 4 cut(s) 21, 155, 541, 571
Bme1390I CCNGG 1 cut(s) 591
BmiI GGNNCC 3 cut(s) 7, 256, 444
BmrFI CCNGG 1 cut(s) 591
BmsI GCATC 1 cut(s) 165
BplI GAGNNNNNCTC 2 cut(s) 279, 311
BpmI CTGGAG 1 cut(s) 139
BpuEI CTTGAG 1 cut(s) 396
BpuMI CCSGG 1 cut(s) 591
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 1 cut(s) 295
BsaWI WCCGGW 1 cut(s) 628
Bsc4I CCNNNNNNNGG 2 cut(s) 15, 517
Bse3DI GCAATG 1 cut(s) 273
BseAI TCCGGA 1 cut(s) 628
BseDI CCNNGG 1 cut(s) 295
BseGI GGATG 1 cut(s) 345
BseLI CCNNNNNNNGG 2 cut(s) 15, 517
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 2 cut(s) 337, 350
BseRI GAGGAG 2 cut(s) 178, 303
BseSI GKGCMC 2 cut(s) 98, 626
BseXI GCAGC 4 cut(s) 6, 165, 526, 581
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 1 cut(s) 476
BsiHKAI GWGCWC 2 cut(s) 98, 626
BsiSI CCGG 2 cut(s) 590, 629
BslI CCNNNNNNNGG 2 cut(s) 15, 517
BsmAI GTCTC 3 cut(s) 285, 326, 347
BsmI GAATGC 2 cut(s) 274, 491
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 2 cut(s) 98, 626
Bsp13I TCCGGA 1 cut(s) 628
Bsp143I GATC 2 cut(s) 5, 442
BspCNI CTCAG 2 cut(s) 336, 349
BspEI TCCGGA 1 cut(s) 628
BspFNI CGCG 1 cut(s) 476
BspLI GGNNCC 3 cut(s) 7, 256, 444
BspPI GGATC 3 cut(s) 13, 437, 450
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 273
BssECI CCNNGG 1 cut(s) 295
BssMI GATC 2 cut(s) 5, 442
Bst4CI ACNGT 3 cut(s) 356, 405, 586
Bst6I CTCTTC 2 cut(s) 244, 432
BstAPI GCANNNNNTGC 1 cut(s) 578
BstC8I GCNNGC 1 cut(s) 489
BstDEI CTNAG 2 cut(s) 323, 336
BstF5I GGATG 1 cut(s) 345
BstFNI CGCG 1 cut(s) 476
BstHHI GCGC 1 cut(s) 619
BstKTI GATC 2 cut(s) 8, 445
BstMAI GTCTC 3 cut(s) 285, 326, 347
BstMBI GATC 2 cut(s) 5, 442
BstMWI GCNNNNNNNGC 3 cut(s) 315, 324, 578
BstNSI RCATGY 2 cut(s) 581, 617
BstSCI CCNGG 1 cut(s) 589
BstSLI GKGCMC 2 cut(s) 98, 626
BstUI CGCG 1 cut(s) 476
BstV1I GCAGC 4 cut(s) 6, 165, 526, 581
BstX2I RGATCY 2 cut(s) 5, 442
BstYI RGATCY 2 cut(s) 5, 442
BsuI GTATCC 1 cut(s) 587
BtsCI GGATG 1 cut(s) 345
BtsI GCAGTG 1 cut(s) 626
BtsIMutI CAGTG 1 cut(s) 626
Cac8I GCNNGC 1 cut(s) 489
CfoI GCGC 1 cut(s) 619
CseI GACGC 1 cut(s) 465
Csp6I GTAC 2 cut(s) 401, 406
CviAII CATG 3 cut(s) 397, 578, 614
CviQI GTAC 2 cut(s) 401, 406
DdeI CTNAG 2 cut(s) 323, 336
DpnI GATC 2 cut(s) 7, 444
DpnII GATC 2 cut(s) 5, 442
Eam1104I CTCTTC 2 cut(s) 244, 432
EarI CTCTTC 2 cut(s) 244, 432
Eco31I GGTCTC 1 cut(s) 285
FaeI CATG 3 cut(s) 400, 581, 617
FatI CATG 3 cut(s) 396, 577, 613
Fnu4HI GCNGC 4 cut(s) 20, 154, 540, 570
FokI GGATG 1 cut(s) 332
Fsp4HI GCNGC 4 cut(s) 20, 154, 540, 570
FspBI CTAG 1 cut(s) 393
FspI TGCGCA 1 cut(s) 618
GlaI GCGC 1 cut(s) 618
GluI GCNGC 4 cut(s) 20, 154, 540, 570
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 1 cut(s) 139
HapII CCGG 2 cut(s) 590, 629
HgaI GACGC 1 cut(s) 465
HhaI GCGC 1 cut(s) 619
Hin1II CATG 3 cut(s) 400, 581, 617
Hin6I GCGC 1 cut(s) 617
HinP1I GCGC 1 cut(s) 617
HinfI GANTC 4 cut(s) 300, 329, 340, 551
HpaII CCGG 2 cut(s) 590, 629
Hpy166II GTNNAC 2 cut(s) 96, 624
Hpy188I TCNGA 5 cut(s) 103, 248, 299, 339, 350
Hpy188III TCNNGA 2 cut(s) 413, 629
Hpy8I GTNNAC 2 cut(s) 96, 624
Hpy99I CGWCG 1 cut(s) 38
HpyAV CCTTC 2 cut(s) 191, 299
HpyCH4III ACNGT 3 cut(s) 356, 405, 586
HpyCH4V TGCA 8 cut(s) 96, 278, 285, 569, 581, 611, 624, 651
HpyF10VI GCNNNNNNNGC 3 cut(s) 315, 324, 578
HpyF3I CTNAG 2 cut(s) 323, 336
Hsp92II CATG 3 cut(s) 400, 581, 617
HspAI GCGC 1 cut(s) 617
Kpn2I TCCGGA 1 cut(s) 628
Kzo9I GATC 2 cut(s) 5, 442
LmnI GCTCC 2 cut(s) 70, 260
LpnPI CCDG 9 cut(s) 103, 459, 475, 481, 485, 503, 558, 603, 642
Lsp1109I GCAGC 4 cut(s) 6, 165, 526, 581
LweI GCATC 1 cut(s) 165
MaeI CTAG 1 cut(s) 393
MaeIII GTNAC 1 cut(s) 530
MalI GATC 2 cut(s) 7, 444
MboI GATC 2 cut(s) 5, 442
MboII GAAGA 3 cut(s) 151, 231, 449
MfeI CAATTG 1 cut(s) 646
MflI RGATCY 2 cut(s) 5, 442
MhlI GDGCHC 2 cut(s) 98, 626
MluCI AATT 4 cut(s) 469, 522, 646, 655
MluI ACGCGT 1 cut(s) 474
MlyI GAGTC 2 cut(s) 294, 349
MmeI TCCRAC 3 cut(s) 187, 222, 282
MnlI CCTC 6 cut(s) 19, 182, 199, 281, 305, 433
MroI TCCGGA 1 cut(s) 628
MroXI GAANNNNTTC 1 cut(s) 355
MseI TTAA 3 cut(s) 419, 432, 527
MspI CCGG 2 cut(s) 590, 629
MspR9I CCNGG 1 cut(s) 591
MunI CAATTG 1 cut(s) 646
Mva1269I GAATGC 2 cut(s) 274, 491
MvnI CGCG 1 cut(s) 476
MwoI GCNNNNNNNGC 3 cut(s) 315, 324, 578
NciI CCSGG 1 cut(s) 591
NdeII GATC 2 cut(s) 5, 442
NlaIII CATG 3 cut(s) 400, 581, 617
NlaIV GGNNCC 3 cut(s) 7, 256, 444
NmuCI GTSAC 1 cut(s) 530
NsbI TGCGCA 1 cut(s) 618
NspI RCATGY 2 cut(s) 581, 617
PctI GAATGC 2 cut(s) 274, 491
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 2 cut(s) 329, 551
PfoI TCCNGGA 1 cut(s) 589
PkrI GCNGC 4 cut(s) 21, 155, 541, 571
PleI GAGTC 2 cut(s) 294, 348
PpsI GAGTC 2 cut(s) 294, 348
PspFI CCCAGC 1 cut(s) 461
PspN4I GGNNCC 3 cut(s) 7, 256, 444
PsuI RGATCY 2 cut(s) 5, 442
RsaI GTAC 2 cut(s) 402, 407
RsaNI GTAC 2 cut(s) 401, 406
SaqAI TTAA 3 cut(s) 419, 432, 527
SatI GCNGC 4 cut(s) 20, 154, 540, 570
Sau3AI GATC 2 cut(s) 5, 442
SchI GAGTC 2 cut(s) 294, 349
ScrFI CCNGG 1 cut(s) 591
SduI GDGCHC 2 cut(s) 98, 626
SetI ASST 8 cut(s) 50, 60, 109, 174, 297, 320, 455, 541
SfaNI GCATC 1 cut(s) 165
SmlI CTYRAG 1 cut(s) 411
SmoI CTYRAG 1 cut(s) 411
Sse9I AATT 4 cut(s) 469, 522, 646, 655
SspI AATATT 2 cut(s) 113, 423
SspMI CTAG 1 cut(s) 393
StyD4I CCNGG 1 cut(s) 589
TaaI ACNGT 3 cut(s) 356, 405, 586
TaqI TCGA 1 cut(s) 303
TasI AATT 4 cut(s) 469, 522, 646, 655
TfiI GAWTC 2 cut(s) 329, 551
Tru1I TTAA 3 cut(s) 419, 432, 527
Tru9I TTAA 3 cut(s) 419, 432, 527
TscAI CASTG 1 cut(s) 626
TseFI GTSAC 1 cut(s) 530
TseI GCWGC 4 cut(s) 19, 153, 539, 569
Tsp45I GTSAC 1 cut(s) 530
TspDTI ATGAA 1 cut(s) 29
TspGWI ACGGA 2 cut(s) 22, 383
TspRI CASTG 1 cut(s) 626
VneI GTGCAC 2 cut(s) 94, 622
XapI RAATTY 1 cut(s) 522
XceI RCATGY 2 cut(s) 581, 617
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.