Rw5G021100

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
28045477 .. 28050721
5245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G021100.1

Sequence Viewer

Length: 1842 bp
ATGGCTGCTTCTTTTCTCCATCGTTCATATTTACACCACCTTGTTGCTCCCACCATAACCCAAACTGACGTCTTGTGCACTTCGGAAGCTGAATATTGCTGGAGATGTGCCCATTTCGGCAATTACACTAATGGCAGCATCTTCCAACAAAACCTCATCAGCCTTCTCTCCTTCTTTTCCAACACTTCCCAAAACCAAGCCAACTACGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATAAATGCATTGTGCAGAGGAGACCTCGGACTCGAAGGCTGTCGTAGCTGTCTCAGCAACTGCACTCAGAGTCTCATGCGAAACTGTTCCTATAAAACGGAAGCAATCTTATGGGCAGAGCCTTGCATGGTACGGTACTCTCAAGACTTAATATTTGGTATTAAGGAAGAGGATCCTGTTAGGTATCTGCCCAACCCGAATTACGCGTCAAATGAGCAAGCATTCAGGCTGTGCACTCCGGACATAGACAAAGTCAATTGCTGTAATTGCCTTAAGAATTGCATCTCTGCTCTTCCAGCATGTTGTAGTGGAAAGTCAGGAGCAAGAGTTCTTAAACGAAGTTGTAATATAAGGTTTGAGATCAATCTTTTCTTGTGGCGGATTTATGATTTGAAAATAGGGAGGGCTACATATTTACGTAAGAGTAACAAAAAAATAAATGTCATCATCATAATTGTGGTTGTGATTGCTTTTGTCACCATGCTTCTTGGTGGCATATGCATTTTCTTAAGAGTCAAGCAGCCAAGTGTAAAACTTGATGGTAAGTTGAACTATGATACTTTGGAAGAAATTAGCCTCGTGGAATCGTTACAATATGACTTTGAAGATATAAGATCAGCAACGGATAACTTTTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAGGCTATATAACGGACGATATATAGCTGTGAAAAGACTCTCCACGAGTTCTGAACAGGGTGATCGTGAATTTAAAAATGAGGTCACGTTAGTTGCTCAACTTCAACACCGAAACTTAGTAAGGCTCTTGGGCTTTTGCTTGAAAGGAGAGGAAAGGCTCCTCATTTACAAATATATACCTAATACAAGTCTTGATCATTTCATTTTTGATATGGCACACATAACATATGTTCTAACCAAATTGTTTTCAGACCCAACCAATCATGGATATTTGGATTGGGAAACACGTTACAAAATCATAGGAGGAATTGTTCGTGGTCTTCTTTACCTCCATGAAGATTCTCGACTTCGAATTATTCACCATTTTGGTATGGCAAGGTTGTTTGTGATGGATCAAACTCAAGGAGATACAAAGACCATCGTTGGGACCTATAGATACATGGCACCTGAATATGCAAGTCATGGGCGCTTTTCTGTCAAGTCAGATGTCTTCAGTTTTGGTGTGTCAGTTCTTGATATAATTACTGGCAAGAAGAGTGGTAGTTTTCAGAATGGTGAAAATGAAGACGATTTGTTAAGCTATGCTTGGAGAAATTGGAGGGATGATACAATTTCAAATATCATAAATCCGATGTTAACAACAAGCTCAAGATATGACATAATCAGATTCATCCACATTGGTTTATTATGCGTCCAAGAAAATATGAAAGACCGACCAACCATGACTTCAGTTGTTTCCATGCTTAATAGTCATTCTCTCACACTCTCAACACCTTCACGACCTTCATATTATTGGCATTATAACACTGATTCAGAAACATCAGGGTCGGGGTTCAGACTTACAGAGACATCTTATAAATTCGAAAGCTCTGTGCCAAGAAGTGTGGTTTCAGATATTACTTAA

Protein Analysis

613

Amino Acids

69.66

Weight (kDa)

8.46

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 35 - 133 4.1e-17 Salt stress response/antifungal
Pkinase PF00069 297 - 433 3.1e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 299 - 561 4.7e-28 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 433 - 559 1.3e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1740, 1794
AatII GACGTC 1 cut(s) 72
AccB1I GGYRCC 1 cut(s) 1381
AccII CGCG 1 cut(s) 461
AccIII TCCGGA 1 cut(s) 493
AciI CCGC 1 cut(s) 634
AclWI GGATC 3 cut(s) 422, 435, 1338
AcsI RAATTY 2 cut(s) 1007, 1796
AcuI CTGAAG 2 cut(s) 1414, 1650
AcyI GRCGYC 1 cut(s) 69
AfaI GTAC 2 cut(s) 387, 392
AfiI CCNNNNNNNGG 1 cut(s) 1362
AflII CTTAAG 2 cut(s) 527, 763
AflIII ACRYGT 2 cut(s) 459, 1223
AgsI TTSAA 6 cut(s) 649, 805, 860, 1043, 1081, 1554
AjuI GAANNNNNNNTTGG 4 cut(s) 888, 920, 1648, 1680
AloI GAACNNNNNNTCC 4 cut(s) 567, 599, 1233, 1265
AluBI AGCT 8 cut(s) 89, 303, 904, 926, 965, 1518, 1584, 1806
AluI AGCT 8 cut(s) 89, 303, 904, 926, 965, 1518, 1584, 1806
Alw21I GWGCWC 2 cut(s) 80, 491
Alw26I GTCTC 4 cut(s) 270, 311, 332, 1778
Alw44I GTGCAC 2 cut(s) 76, 487
AlwI GGATC 3 cut(s) 422, 435, 1338
AlwNI CAGNNNCTG 1 cut(s) 315
Aor13HI TCCGGA 1 cut(s) 493
ApaLI GTGCAC 2 cut(s) 76, 487
ApeKI GCWGC 3 cut(s) 5, 135, 775
ApoI RAATTY 2 cut(s) 1007, 1796
ArsI GACNNNNNNTTYG 4 cut(s) 392, 424, 446, 478
Asp700I GAANNNNTTC 1 cut(s) 340
AspLEI GCGC 1 cut(s) 1407
AspS9I GGNCC 1 cut(s) 1365
AsuHPI GGTGA 4 cut(s) 724, 1010, 1289, 1505
AsuII TTCGAA 2 cut(s) 1288, 1800
AvaII GGWCC 1 cut(s) 1365
BaeGI GKGCMC 3 cut(s) 80, 112, 491
BamHI GGATCC 1 cut(s) 427
BanI GGYRCC 1 cut(s) 1381
BauI CACGAG 2 cut(s) 833, 982
BbsI GAAGAC 3 cut(s) 1250, 1420, 1509
Bbv12I GWGCWC 2 cut(s) 80, 491
BbvI GCAGC 2 cut(s) 147, 787
BccI CCATC 4 cut(s) 27, 788, 1321, 1364
BceAI ACGGC 1 cut(s) 223
BclI TGATCA 1 cut(s) 1132
BcoDI GTCTC 4 cut(s) 270, 311, 332, 1778
BfmI CTRYAG 1 cut(s) 1369
BfoI RGCGCY 1 cut(s) 1408
BfrI CTTAAG 2 cut(s) 527, 763
BisI GCNGC 3 cut(s) 6, 136, 776
BlsI GCNGC 3 cut(s) 7, 137, 777
Bme18I GGWCC 1 cut(s) 1365
BmgT120I GGNCC 1 cut(s) 1365
BmiI GGNNCC 5 cut(s) 238, 429, 1097, 1366, 1383
BmsI GCATC 2 cut(s) 147, 546
BpiI GAAGAC 3 cut(s) 1250, 1420, 1509
BplI GAGNNNNNCTC 2 cut(s) 264, 296
BpmI CTGGAG 1 cut(s) 121
Bpu14I TTCGAA 2 cut(s) 1288, 1800
BpuEI CTTGAG 3 cut(s) 381, 1323, 1570
BsaAI YACGTR 1 cut(s) 674
BsaHI GRCGYC 1 cut(s) 69
BsaI GGTCTC 1 cut(s) 270
BsaJI CCNNGG 1 cut(s) 280
BsaWI WCCGGW 1 cut(s) 493
BsaXI ACNNNNNCTCC 4 cut(s) 567, 597, 1233, 1263
Bsc4I CCNNNNNNNGG 1 cut(s) 1362
Bse1I ACTGG 1 cut(s) 1468
BseAI TCCGGA 1 cut(s) 493
BseDI CCNNGG 1 cut(s) 280
BseGI GGATG 2 cut(s) 1546, 1608
BseLI CCNNNNNNNGG 1 cut(s) 1362
BseMII CTCAG 2 cut(s) 322, 335
BseNI ACTGG 1 cut(s) 1468
BseRI GAGGAG 2 cut(s) 288, 1088
BseSI GKGCMC 3 cut(s) 80, 112, 491
BseXI GCAGC 2 cut(s) 147, 787
BsgI GTGCAG 2 cut(s) 289, 301
Bsh1236I CGCG 1 cut(s) 461
BshNI GGYRCC 1 cut(s) 1381
BsiHKAI GWGCWC 2 cut(s) 80, 491
BsiSI CCGG 1 cut(s) 494
BslFI GGGAC 1 cut(s) 1378
BslI CCNNNNNNNGG 1 cut(s) 1362
BsmAI GTCTC 4 cut(s) 270, 311, 332, 1778
BsmFI GGGAC 1 cut(s) 1378
BsmI GAATGC 2 cut(s) 256, 476
Bso31I GGTCTC 1 cut(s) 270
Bsp119I TTCGAA 2 cut(s) 1288, 1800
Bsp1286I GDGCHC 3 cut(s) 80, 112, 491
Bsp13I TCCGGA 1 cut(s) 493
Bsp143I GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
BspACI CCGC 1 cut(s) 634
BspCNI CTCAG 2 cut(s) 321, 334
BspEI TCCGGA 1 cut(s) 493
BspFNI CGCG 1 cut(s) 461
BspLI GGNNCC 5 cut(s) 238, 429, 1097, 1366, 1383
BspPI GGATC 3 cut(s) 422, 435, 1338
BspQI GCTCTTC 1 cut(s) 552
BspT104I TTCGAA 2 cut(s) 1288, 1800
BspT107I GGYRCC 1 cut(s) 1381
BspTI CTTAAG 2 cut(s) 527, 763
BspTNI GGTCTC 1 cut(s) 270
BsrI ACTGG 1 cut(s) 1468
BssECI CCNNGG 1 cut(s) 280
BssMI GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
BssNI GRCGYC 1 cut(s) 69
BssSI CACGAG 2 cut(s) 833, 982
Bst2BI CACGAG 2 cut(s) 833, 982
Bst4CI ACNGT 2 cut(s) 341, 390
Bst6I CTCTTC 4 cut(s) 226, 417, 552, 1466
BstACI GRCGYC 1 cut(s) 69
BstAFI CTTAAG 2 cut(s) 527, 763
BstBAI YACGTR 1 cut(s) 674
BstBI TTCGAA 2 cut(s) 1288, 1800
BstC8I GCNNGC 1 cut(s) 474
BstDEI CTNAG 3 cut(s) 308, 321, 1054
BstF5I GGATG 2 cut(s) 1546, 1608
BstFNI CGCG 1 cut(s) 461
BstH2I RGCGCY 1 cut(s) 1408
BstHHI GCGC 1 cut(s) 1407
BstKTI GATC 6 cut(s) 430, 618, 872, 1003, 1135, 1333
BstMAI GTCTC 4 cut(s) 270, 311, 332, 1778
BstMBI GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
BstMWI GCNNNNNNNGC 5 cut(s) 260, 300, 309, 522, 551
BstNSI RCATGY 1 cut(s) 558
BstSFI CTRYAG 1 cut(s) 1369
BstSLI GKGCMC 3 cut(s) 80, 112, 491
BstSNI TACGTA 1 cut(s) 674
BstUI CGCG 1 cut(s) 461
BstV1I GCAGC 2 cut(s) 147, 787
BstV2I GAAGAC 3 cut(s) 1250, 1420, 1509
BstX2I RGATCY 1 cut(s) 427
BstYI RGATCY 1 cut(s) 427
BtsCI GGATG 2 cut(s) 1546, 1608
BtsIMutI CAGTG 1 cut(s) 1743
Cac8I GCNNGC 1 cut(s) 474
CaiI CAGNNNCTG 1 cut(s) 315
CfoI GCGC 1 cut(s) 1407
Cfr13I GGNCC 1 cut(s) 1365
CseI GACGC 2 cut(s) 450, 1618
Csp6I GTAC 2 cut(s) 386, 391
CspCI CAANNNNNGTGG 4 cut(s) 1456, 1491, 1803, 1838
CviQI GTAC 2 cut(s) 386, 391
DdeI CTNAG 3 cut(s) 308, 321, 1054
DpnI GATC 6 cut(s) 429, 617, 871, 1002, 1134, 1332
DpnII GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
DraI TTTAAA 1 cut(s) 1012
Eam1104I CTCTTC 4 cut(s) 226, 417, 552, 1466
EarI CTCTTC 4 cut(s) 226, 417, 552, 1466
EciI GGCGGA 1 cut(s) 649
Eco105I TACGTA 1 cut(s) 674
Eco31I GGTCTC 1 cut(s) 270
Eco47I GGWCC 1 cut(s) 1365
Eco57I CTGAAG 2 cut(s) 1414, 1650
EcoO109I RGGNCCY 1 cut(s) 1365
EcoT22I ATGCAT 2 cut(s) 265, 758
FalI AAGNNNNNCTT 2 cut(s) 1507, 1539
FaqI GGGAC 1 cut(s) 1378
FauNDI CATATG 2 cut(s) 752, 1165
FbaI TGATCA 1 cut(s) 1132
Fnu4HI GCNGC 3 cut(s) 6, 136, 776
FokI GGATG 2 cut(s) 1553, 1595
Fsp4HI GCNGC 3 cut(s) 6, 136, 776
GlaI GCGC 1 cut(s) 1406
GluI GCNGC 3 cut(s) 6, 136, 776
GsuI CTGGAG 1 cut(s) 121
HaeII RGCGCY 1 cut(s) 1408
HapII CCGG 1 cut(s) 494
HgaI GACGC 2 cut(s) 450, 1618
HhaI GCGC 1 cut(s) 1407
Hin1I GRCGYC 1 cut(s) 69
Hin6I GCGC 1 cut(s) 1405
HinP1I GCGC 1 cut(s) 1405
HincII GTYRAC 1 cut(s) 1575
HindII GTYRAC 1 cut(s) 1575
HindIII AAGCTT 1 cut(s) 902
HinfI GANTC 8 cut(s) 285, 325, 768, 839, 975, 1277, 1605, 1748
HpaI GTTAAC 1 cut(s) 1575
HpaII CCGG 1 cut(s) 494
HphI GGTGA 4 cut(s) 724, 1010, 1289, 1505
Hpy166II GTNNAC 4 cut(s) 78, 489, 931, 1575
Hpy188III TCNNGA 9 cut(s) 398, 494, 573, 1004, 1130, 1281, 1451, 1587, 1716
Hpy8I GTNNAC 4 cut(s) 78, 489, 931, 1575
HpyAV CCTTC 5 cut(s) 173, 181, 284, 1722, 1731
HpyCH4III ACNGT 2 cut(s) 341, 390
HpyCH4IV ACGT 4 cut(s) 69, 673, 1025, 1225
HpyCH4V TGCA 9 cut(s) 78, 263, 270, 318, 381, 489, 537, 756, 1394
HpyF10VI GCNNNNNNNGC 5 cut(s) 260, 300, 309, 522, 551
HpyF3I CTNAG 3 cut(s) 308, 321, 1054
HpySE526I ACGT 4 cut(s) 69, 673, 1025, 1225
Hsp92I GRCGYC 1 cut(s) 69
HspAI GCGC 1 cut(s) 1405
Kpn2I TCCGGA 1 cut(s) 493
Ksp22I TGATCA 1 cut(s) 1132
KspAI GTTAAC 1 cut(s) 1575
Kzo9I GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
LguI GCTCTTC 1 cut(s) 552
LmnI GCTCC 5 cut(s) 52, 242, 575, 923, 1101
Lsp1109I GCAGC 2 cut(s) 147, 787
LweI GCATC 2 cut(s) 147, 546
MaeII ACGT 4 cut(s) 69, 673, 1025, 1225
MaeIII GTNAC 5 cut(s) 680, 730, 843, 1021, 1226
MalI GATC 6 cut(s) 429, 617, 871, 1002, 1134, 1332
MboI GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
MfeI CAATTG 1 cut(s) 511
MflI RGATCY 1 cut(s) 427
MhlI GDGCHC 3 cut(s) 80, 112, 491
MluI ACGCGT 1 cut(s) 459
MlyI GAGTC 4 cut(s) 279, 334, 777, 969
MmeI TCCRAC 3 cut(s) 169, 204, 264
Mph1103I ATGCAT 2 cut(s) 265, 758
MroI TCCGGA 1 cut(s) 493
MroXI GAANNNNTTC 1 cut(s) 340
MslI CAYNNNNRTG 1 cut(s) 710
MspCI CTTAAG 2 cut(s) 527, 763
MspI CCGG 1 cut(s) 494
MunI CAATTG 1 cut(s) 511
Mva1269I GAATGC 2 cut(s) 256, 476
MvnI CGCG 1 cut(s) 461
MwoI GCNNNNNNNGC 5 cut(s) 260, 300, 309, 522, 551
NdeI CATATG 2 cut(s) 752, 1165
NdeII GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
NlaIV GGNNCC 5 cut(s) 238, 429, 1097, 1366, 1383
NmuCI GTSAC 2 cut(s) 730, 1021
NsiI ATGCAT 2 cut(s) 265, 758
NspI RCATGY 1 cut(s) 558
NspV TTCGAA 2 cut(s) 1288, 1800
PciSI GCTCTTC 1 cut(s) 552
PctI GAATGC 2 cut(s) 256, 476
PdmI GAANNNNTTC 1 cut(s) 340
PfeI GAWTC 4 cut(s) 839, 1277, 1605, 1748
PflFI GACNNNGTC 1 cut(s) 506
PkrI GCNGC 3 cut(s) 7, 137, 777
PleI GAGTC 4 cut(s) 279, 333, 776, 969
PpsI GAGTC 4 cut(s) 279, 333, 776, 969
Ppu21I YACGTR 1 cut(s) 674
PpuMI RGGWCCY 1 cut(s) 1365
PsiI TTATAA 2 cut(s) 1740, 1794
Psp5II RGGWCCY 1 cut(s) 1365
PspN4I GGNNCC 5 cut(s) 238, 429, 1097, 1366, 1383
PspPI GGNCC 1 cut(s) 1365
PspPPI RGGWCCY 1 cut(s) 1365
PstNI CAGNNNCTG 1 cut(s) 315
PsuI RGATCY 1 cut(s) 427
PsyI GACNNNGTC 1 cut(s) 506
RsaI GTAC 2 cut(s) 387, 392
RsaNI GTAC 2 cut(s) 386, 391
RseI CAYNNNNRTG 1 cut(s) 710
SapI GCTCTTC 1 cut(s) 552
SatI GCNGC 3 cut(s) 6, 136, 776
Sau3AI GATC 6 cut(s) 427, 615, 869, 1000, 1132, 1330
Sau96I GGNCC 1 cut(s) 1365
SchI GAGTC 4 cut(s) 279, 334, 777, 969
SduI GDGCHC 3 cut(s) 80, 112, 491
SfaNI GCATC 2 cut(s) 147, 546
SfcI CTRYAG 1 cut(s) 1369
SfuI TTCGAA 2 cut(s) 1288, 1800
SinI GGWCC 1 cut(s) 1365
SmiMI CAYNNNNRTG 1 cut(s) 710
SmlI CTYRAG 5 cut(s) 396, 527, 763, 1338, 1585
SmoI CTYRAG 5 cut(s) 396, 527, 763, 1338, 1585
SnaBI TACGTA 1 cut(s) 674
SsiI CCGC 1 cut(s) 634
SspI AATATT 2 cut(s) 95, 408
TaaI ACNGT 2 cut(s) 341, 390
TaiI ACGT 4 cut(s) 72, 676, 1028, 1228
TaqI TCGA 4 cut(s) 288, 1282, 1288, 1800
TaqII GACCGA 1 cut(s) 1665
TfiI GAWTC 4 cut(s) 839, 1277, 1605, 1748
TscAI CASTG 1 cut(s) 1750
TseFI GTSAC 2 cut(s) 730, 1021
TseI GCWGC 3 cut(s) 5, 135, 775
Tsp45I GTSAC 2 cut(s) 730, 1021
TspDTI ATGAA 8 cut(s) 15, 909, 1129, 1287, 1515, 1597, 1658, 1713
TspGWI ACGGA 3 cut(s) 368, 893, 966
TspRI CASTG 1 cut(s) 1750
Tth111I GACNNNGTC 1 cut(s) 506
Vha464I CTTAAG 2 cut(s) 527, 763
VneI GTGCAC 2 cut(s) 76, 487
VpaK11BI GGWCC 1 cut(s) 1365
XapI RAATTY 2 cut(s) 1007, 1796
XceI RCATGY 1 cut(s) 558
XmnI GAANNNNTTC 1 cut(s) 340
ZraI GACGTC 1 cut(s) 70
Zsp2I ATGCAT 2 cut(s) 265, 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.