MD02G1101400.v1.1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
8146907 .. 8149924
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1101400.v1.1.491

Sequence Viewer

Length: 2067 bp
ATGCCAGCAATGGATTCCTCAAGATTTCTATTCTGCCTCTTTCCCATTCTGTTCCTCATGATTAATCAAGCCCTTGGTCAACTTCCAGGTTCTCTATCCCTCAATTGCACAAACGAAAATGGAAACTACACCACCAATAGTATCTATCAGACAAACCTCAACCGCCTCCTCTCCTCCCTGCCCTCCAACGAAAGCGGCAACGGGTATGGCTTTTACAATGCATCATATCCCCTAAACTCGTTGAACGAGCACATTTATGCAATCGGACTTTGTAGAGGAGATGTCAAGGCGGAAGATTGCCGCAGCTGCCTAAATAACTCCGGATATGCTCTCCCAAAGCTTTGCCCTAATCAGAAGGAAGCAATTGGTTGGAATGACAATTGCATGTTACGCTACTCAAACCGCTCCATCTATGGCGTCATGGAAATTAGTCCTCATTTCTATCTGTGGAACACTAAGAACATATTGTCGTCCCGCCAGGATGGATTCTACCAAGACCTGCGTACGGTACTGTACAGCATAAGAAGTGAAGCTGCAGCTGGCGGTTCTCTTCGGAAATTTGCATTCGGAAACACAAGTACCCCAACTTTCCAAACAATATATGCATTCGCGCAATGCACGCCAGACATATCAGAGCAAGAGTGCAGTGAGTGCTTAGGTGGGGCTTTTGGAGATATCCCCATATGTTGTGACGGGAAAGAAGGTGGGAGAGTTTATAGACCTAGCTGTCACTTTAGATTCGAGGTTTACAGCTTCATTGACCCTACAACTGTCACACAACTGCCATCTCCGCCACCAATACATTCTCCTCCACCATCAACCAATAAAACTAACACTTCACAAGGATCGAAGATCAGCAAATCTCGGACTGTCGTCATTATTGTTGTGCCAATTATTGCTTCTTTGGTACTAGTAATGTTCATGGGCATTTGTCTAAGAATACGGAAAGCAAAGAAAAAGCTTAAAAATAATTTAAGTCCAGGCGAAGACACGGACAAAATTGGAAGTGCAGAATCCTTGCAATTCAATTTCGACGCCATTAAAATTGCCACAGATGACTTTTCTGAAGCCAATGAACTAGGACAAGGGGGATTTGGTTCTGTTTACAAGGGTAGGTTATTGAATGGAGAAGAAATAGCAGTGAAAAGGCTCTCCGTAAATTCTAGACAAGGAAATTCGGAGTTTAAAAATGAGGTCTCGTTAGTGGCAAAGCTTCAACACCGAAACTTAGTTAGGCTCTTGGGTTTCAGCTTGGAAGGTGTTGAAAGGCTTCTTATTTATGAGTTTGTCCCTAATGGAAGTCTGGACCACATCATATTTGACCCAATCAAGCGCGCACAACTGGATTGGGATAGGCGCTACAAAATCATTGTAGGCATTACTCGAGGGCTCATTTACCTTCATGAAGATTCGCGGCTTAGAATTATTCATCGTGATCTCAAAGCCGGTAATATCTTGATAGATGAAGAAATGACTCCCAAGATATCAGATTTTGGCATGGCAAAATTGTTTGGGGTTGATCAAACACAAGGCAATACCAGTCGAATTGTGGGGACCGAGGGATATATGGCTCCAGAATATCGGATGCAGGGGGACTTTTCTGTTAAGTCAGATGTCTATAGTTTTGGTGTCTTAGTTTTGGAGATAGTTAGCGGACAGAAAACTAATTCCTTTCGTCACGGCGAGAACATGGAGCATCTTCTAAGCTACGCATGGAAATGTTGGAGGGAAGGGACAGCTTCAAATCTAATAGATCCCGCGTTGACGAACGGTTCAAGAAATGAAATAATGAGATGCATCCATATTGGGTTGCTATGTGTGCAAGAAAATATAGCCGATAGGCCAACCATGAATGCTGTTGTTCTAATGCTTAATAGTTATTCAGTCACATTTCCAGTACCCTCACAACCAGCATTTTTCAGAGATAGTAACGTTGGATCTGACATGTCTTTGGGATGGAAGAATAGTTCGGAGGTGATTACAACCGGGTCGGATCGTTCCAAGAGCAGCTCTGTCAAAGCACCAGAAAATGAGGTTTCATTGATCACCGAAGTACATCCTAGATAG

Protein Analysis

689

Amino Acids

76.54

Weight (kDa)

7.48

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 35 - 135 5.4e-25 Salt stress response/antifungal
Stress-antifung PF01657 158 - 249 6.2e-11 Salt stress response/antifungal
Pkinase PF00069 355 - 563 2.9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 357 - 621 8.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 726
Acc36I ACCTGC 1 cut(s) 507
AccBSI CCGCTC 1 cut(s) 405
AccII CGCG 4 cut(s) 611, 1335, 1414, 1760
AccIII TCCGGA 1 cut(s) 320
AclI AACGTT 1 cut(s) 1932
AclWI GGATC 4 cut(s) 853, 1748, 1945, 2001
AcsI RAATTY 3 cut(s) 557, 1159, 1174
AcuI CTGAAG 1 cut(s) 1086
AcyI GRCGYC 2 cut(s) 417, 1035
AfaI GTAC 7 cut(s) 505, 510, 515, 580, 909, 1899, 2055
AfiI CCNNNNNNNGG 1 cut(s) 505
AflIII ACRYGT 1 cut(s) 1944
AgsI TTSAA 7 cut(s) 244, 1027, 1123, 1217, 1265, 1743, 1776
AhlI ACTAGT 1 cut(s) 910
AjnI CCWGG 3 cut(s) 85, 477, 979
AjuI GAANNNNNNNTTGG 2 cut(s) 883, 915
AloI GAACNNNNNNTCC 2 cut(s) 1951, 1983
Alw21I GWGCWC 1 cut(s) 252
Alw26I GTCTC 1 cut(s) 1201
AlwI GGATC 4 cut(s) 853, 1748, 1945, 2001
Ama87I CYCGRG 1 cut(s) 1383
Aor13HI TCCGGA 1 cut(s) 320
AoxI GGCC 1 cut(s) 1841
ApeKI GCWGC 5 cut(s) 303, 306, 533, 536, 2007
ApoI RAATTY 3 cut(s) 557, 1159, 1174
AseI ATTAAT 1 cut(s) 63
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 4 cut(s) 613, 1335, 1337, 1359
AspS9I GGNCC 2 cut(s) 1306, 1554
AsuC2I CCSGG 1 cut(s) 1987
AsuHPI GGTGA 2 cut(s) 1987, 2038
AvaI CYCGRG 1 cut(s) 1383
AvaII GGWCC 2 cut(s) 1306, 1554
BaeI ACNNNNGTAYC 2 cut(s) 562, 595
BanII GRGCYC 1 cut(s) 1392
BbsI GAAGAC 1 cut(s) 993
Bbv12I GWGCWC 1 cut(s) 252
BbvI GCAGC 5 cut(s) 293, 315, 520, 548, 2019
BccI CCATC 5 cut(s) 416, 476, 793, 823, 1950
BceAI ACGGC 1 cut(s) 1696
BciT130I CCWGG 3 cut(s) 87, 479, 981
BclI TGATCA 2 cut(s) 1519, 2043
BcnI CCSGG 1 cut(s) 1987
BcoDI GTCTC 1 cut(s) 1201
BcuI ACTAGT 1 cut(s) 910
BfaI CTAG 5 cut(s) 723, 911, 1079, 1164, 2061
BfmI CTRYAG 2 cut(s) 534, 1618
BfoI RGCGCY 1 cut(s) 1360
BfuAI ACCTGC 1 cut(s) 507
BisI GCNGC 8 cut(s) 196, 301, 304, 307, 534, 537, 1415, 2008
BlsI GCNGC 8 cut(s) 197, 302, 305, 308, 535, 538, 1416, 2009
Bme1390I CCNGG 4 cut(s) 87, 479, 981, 1987
Bme18I GGWCC 2 cut(s) 1306, 1554
BmeT110I CYCGRG 1 cut(s) 1383
BmgT120I GGNCC 2 cut(s) 1306, 1554
BmiI GGNNCC 2 cut(s) 1555, 1572
BmrFI CCNGG 4 cut(s) 87, 479, 981, 1987
BmsI GCATC 5 cut(s) 230, 1575, 1705, 1784, 1806
BoxI GACNNNNGTC 1 cut(s) 872
BpiI GAAGAC 1 cut(s) 993
BpmI CTGGAG 1 cut(s) 1557
Bpu10I CCTNAGC 1 cut(s) 655
BpuEI CTTGAG 1 cut(s) 4
BpuMI CCSGG 1 cut(s) 1987
BsaHI GRCGYC 2 cut(s) 417, 1035
BsaI GGTCTC 1 cut(s) 1201
BsaJI CCNNGG 2 cut(s) 73, 1557
BsaWI WCCGGW 1 cut(s) 320
Bsc4I CCNNNNNNNGG 1 cut(s) 505
Bse118I RCCGGY 1 cut(s) 1445
Bse1I ACTGG 3 cut(s) 1347, 1539, 1895
Bse3DI GCAATG 2 cut(s) 15, 620
BseAI TCCGGA 1 cut(s) 320
BseBI CCWGG 3 cut(s) 87, 479, 981
BseDI CCNNGG 2 cut(s) 73, 1557
BseGI GGATG 5 cut(s) 487, 1590, 1797, 1961, 2056
BseLI CCNNNNNNNGG 1 cut(s) 505
BseMI GCAATG 2 cut(s) 15, 620
BseNI ACTGG 3 cut(s) 1347, 1539, 1895
BsePI GCGCGC 1 cut(s) 1333
BseRI GAGGAG 4 cut(s) 158, 163, 291, 798
BseXI GCAGC 5 cut(s) 293, 315, 520, 548, 2019
BsgI GTGCAG 2 cut(s) 664, 1029
Bsh1236I CGCG 4 cut(s) 611, 1335, 1414, 1760
BshFI GGCC 1 cut(s) 1843
BsiHKAI GWGCWC 1 cut(s) 252
BsiHKCI CYCGRG 1 cut(s) 1383
BsiSI CCGG 3 cut(s) 321, 1446, 1986
BsiWI CGTACG 1 cut(s) 503
BslFI GGGAC 5 cut(s) 457, 1274, 1567, 1607, 1747
BslI CCNNNNNNNGG 1 cut(s) 505
BsmAI GTCTC 1 cut(s) 1201
BsmFI GGGAC 5 cut(s) 457, 1274, 1567, 1607, 1747
BsmI GAATGC 3 cut(s) 563, 605, 1858
BsnI GGCC 1 cut(s) 1843
Bso31I GGTCTC 1 cut(s) 1201
BsoBI CYCGRG 1 cut(s) 1383
Bsp1286I GDGCHC 2 cut(s) 252, 1392
Bsp13I TCCGGA 1 cut(s) 320
Bsp1407I TGTACA 1 cut(s) 513
Bsp143I GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
BspANI GGCC 1 cut(s) 1843
BspEI TCCGGA 1 cut(s) 320
BspFNI CGCG 4 cut(s) 611, 1335, 1414, 1760
BspHI TCATGA 2 cut(s) 57, 1402
BspLI GGNNCC 2 cut(s) 1555, 1572
BspMAI CTGCAG 1 cut(s) 538
BspMI ACCTGC 1 cut(s) 507
BspPI GGATC 4 cut(s) 853, 1748, 1945, 2001
BspTNI GGTCTC 1 cut(s) 1201
BsrBI CCGCTC 1 cut(s) 405
BsrDI GCAATG 2 cut(s) 15, 620
BsrFI RCCGGY 1 cut(s) 1445
BsrGI TGTACA 1 cut(s) 513
BsrI ACTGG 3 cut(s) 1347, 1539, 1895
BssAI RCCGGY 1 cut(s) 1445
BssECI CCNNGG 2 cut(s) 73, 1557
BssHII GCGCGC 1 cut(s) 1333
BssMI GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
BssNI GRCGYC 2 cut(s) 417, 1035
BssT1I CCWWGG 1 cut(s) 73
Bst2UI CCWGG 3 cut(s) 87, 479, 981
Bst4CI ACNGT 5 cut(s) 508, 513, 772, 871, 1772
Bst6I CTCTTC 1 cut(s) 555
BstACI GRCGYC 2 cut(s) 417, 1035
BstAPI GCANNNNNTGC 1 cut(s) 651
BstAUI TGTACA 1 cut(s) 513
BstC8I GCNNGC 4 cut(s) 6, 541, 620, 1335
BstDEI CTNAG 7 cut(s) 456, 655, 935, 1228, 1418, 1633, 1703
BstF5I GGATG 5 cut(s) 487, 1590, 1797, 1961, 2056
BstFNI CGCG 4 cut(s) 611, 1335, 1414, 1760
BstH2I RGCGCY 1 cut(s) 1360
BstHHI GCGC 4 cut(s) 613, 1335, 1337, 1359
BstKTI GATC 8 cut(s) 848, 855, 1438, 1522, 1756, 1940, 1996, 2046
BstMAI GTCTC 1 cut(s) 1201
BstMBI GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
BstMWI GCNNNNNNNGC 6 cut(s) 306, 390, 619, 651, 790, 1819
BstNI CCWGG 3 cut(s) 87, 479, 981
BstNSI RCATGY 2 cut(s) 388, 1948
BstPAI GACNNNNGTC 1 cut(s) 872
BstSCI CCNGG 4 cut(s) 85, 477, 979, 1985
BstSFI CTRYAG 2 cut(s) 534, 1618
BstUI CGCG 4 cut(s) 611, 1335, 1414, 1760
BstV1I GCAGC 5 cut(s) 293, 315, 520, 548, 2019
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 2 cut(s) 1753, 1937
BstYI RGATCY 2 cut(s) 1753, 1937
BsuRI GGCC 1 cut(s) 1843
BtsCI GGATG 5 cut(s) 487, 1590, 1797, 1961, 2056
BtsI GCAGTG 2 cut(s) 652, 1146
BtsIMutI CAGTG 2 cut(s) 652, 1146
BveI ACCTGC 1 cut(s) 507
Cac8I GCNNGC 4 cut(s) 6, 541, 620, 1335
CciI TCATGA 2 cut(s) 57, 1402
CfoI GCGC 4 cut(s) 613, 1335, 1337, 1359
Cfr10I RCCGGY 1 cut(s) 1445
Cfr13I GGNCC 2 cut(s) 1306, 1554
CseI GACGC 2 cut(s) 406, 1043
Csp6I GTAC 7 cut(s) 504, 509, 514, 579, 908, 1898, 2054
CviQI GTAC 7 cut(s) 504, 509, 514, 579, 908, 1898, 2054
DdeI CTNAG 7 cut(s) 456, 655, 935, 1228, 1418, 1633, 1703
DpnI GATC 8 cut(s) 847, 854, 1437, 1521, 1755, 1939, 1995, 2045
DpnII GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
DraI TTTAAA 1 cut(s) 1186
DrdI GACNNNNNNGTC 1 cut(s) 726
DseDI GACNNNNNNGTC 1 cut(s) 726
Eam1104I CTCTTC 1 cut(s) 555
EarI CTCTTC 1 cut(s) 555
EciI GGCGGA 2 cut(s) 305, 780
Eco130I CCWWGG 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 1392
Eco31I GGTCTC 1 cut(s) 1201
Eco32I GATATC 2 cut(s) 676, 1485
Eco47I GGWCC 2 cut(s) 1306, 1554
Eco57I CTGAAG 1 cut(s) 1086
Eco88I CYCGRG 1 cut(s) 1383
EcoRII CCWGG 3 cut(s) 85, 477, 979
EcoRV GATATC 2 cut(s) 676, 1485
EcoT14I CCWWGG 1 cut(s) 73
EcoT22I ATGCAT 3 cut(s) 223, 607, 1799
EcoT38I GRGCYC 1 cut(s) 1392
ErhI CCWWGG 1 cut(s) 73
FaqI GGGAC 5 cut(s) 457, 1274, 1567, 1607, 1747
FauI CCCGC 2 cut(s) 482, 1765
FauNDI CATATG 1 cut(s) 683
FbaI TGATCA 2 cut(s) 1519, 2043
Fnu4HI GCNGC 8 cut(s) 196, 301, 304, 307, 534, 537, 1415, 2008
FokI GGATG 5 cut(s) 494, 1597, 1784, 1968, 2043
FriOI GRGCYC 1 cut(s) 1392
Fsp4HI GCNGC 8 cut(s) 196, 301, 304, 307, 534, 537, 1415, 2008
FspBI CTAG 5 cut(s) 723, 911, 1079, 1164, 2061
GlaI GCGC 4 cut(s) 612, 1334, 1336, 1358
GluI GCNGC 8 cut(s) 196, 301, 304, 307, 534, 537, 1415, 2008
GsuI CTGGAG 1 cut(s) 1557
HaeII RGCGCY 1 cut(s) 1360
HaeIII GGCC 1 cut(s) 1843
HapII CCGG 3 cut(s) 321, 1446, 1986
HgaI GACGC 2 cut(s) 406, 1043
HhaI GCGC 4 cut(s) 613, 1335, 1337, 1359
Hin1I GRCGYC 2 cut(s) 417, 1035
Hin6I GCGC 4 cut(s) 611, 1333, 1335, 1357
HinP1I GCGC 4 cut(s) 611, 1333, 1335, 1357
HincII GTYRAC 2 cut(s) 80, 1764
HindII GTYRAC 2 cut(s) 80, 1764
HindIII AAGCTT 3 cut(s) 338, 959, 1211
HinfI GANTC 6 cut(s) 14, 486, 738, 1013, 1409, 1474
HpaII CCGG 3 cut(s) 321, 1446, 1986
HphI GGTGA 2 cut(s) 1987, 2038
Hpy166II GTNNAC 4 cut(s) 80, 748, 1105, 1764
Hpy8I GTNNAC 4 cut(s) 80, 748, 1105, 1764
Hpy99I CGWCG 1 cut(s) 1037
HpyAV CCTTC 5 cut(s) 349, 695, 1250, 1409, 1724
HpyCH4III ACNGT 5 cut(s) 508, 513, 772, 871, 1772
HpyCH4IV ACGT 1 cut(s) 1932
HpyF10VI GCNNNNNNNGC 6 cut(s) 306, 390, 619, 651, 790, 1819
HpyF3I CTNAG 7 cut(s) 456, 655, 935, 1228, 1418, 1633, 1703
HpySE526I ACGT 1 cut(s) 1932
Hsp92I GRCGYC 2 cut(s) 417, 1035
HspAI GCGC 4 cut(s) 611, 1333, 1335, 1357
Kpn2I TCCGGA 1 cut(s) 320
Ksp22I TGATCA 2 cut(s) 1519, 2043
Kzo9I GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
LmnI GCTCC 3 cut(s) 410, 1576, 1693
Lsp1109I GCAGC 5 cut(s) 293, 315, 520, 548, 2019
LweI GCATC 5 cut(s) 230, 1575, 1705, 1784, 1806
MaeI CTAG 5 cut(s) 723, 911, 1079, 1164, 2061
MaeII ACGT 1 cut(s) 1932
MaeIII GTNAC 7 cut(s) 387, 689, 728, 772, 1676, 1885, 1928
MalI GATC 8 cut(s) 847, 854, 1437, 1521, 1755, 1939, 1995, 2045
MbiI CCGCTC 1 cut(s) 405
MboI GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
MboII GAAGA 9 cut(s) 305, 542, 862, 998, 1142, 1418, 1478, 1691, 1972
MfeI CAATTG 3 cut(s) 103, 363, 379
MflI RGATCY 2 cut(s) 1753, 1937
MhlI GDGCHC 2 cut(s) 252, 1392
MlyI GAGTC 1 cut(s) 1468
MmeI TCCRAC 5 cut(s) 210, 350, 1703, 1915, 1971
Mph1103I ATGCAT 3 cut(s) 223, 607, 1799
MroI TCCGGA 1 cut(s) 320
MroXI GAANNNNTTC 1 cut(s) 1269
MseI TTAA 7 cut(s) 63, 963, 974, 1041, 1185, 1605, 1872
MslI CAYNNNNRTG 2 cut(s) 255, 1717
MspA1I CMGCKG 2 cut(s) 306, 539
MspI CCGG 3 cut(s) 321, 1446, 1986
MspR9I CCNGG 4 cut(s) 87, 479, 981, 1987
MunI CAATTG 3 cut(s) 103, 363, 379
Mva1269I GAATGC 3 cut(s) 563, 605, 1858
MvaI CCWGG 3 cut(s) 87, 479, 981
MvnI CGCG 4 cut(s) 611, 1335, 1414, 1760
MwoI GCNNNNNNNGC 6 cut(s) 306, 390, 619, 651, 790, 1819
NciI CCSGG 1 cut(s) 1987
NdeI CATATG 1 cut(s) 683
NdeII GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
NlaIV GGNNCC 2 cut(s) 1555, 1572
NmuCI GTSAC 5 cut(s) 689, 728, 772, 1676, 1885
NsiI ATGCAT 3 cut(s) 223, 607, 1799
NspI RCATGY 2 cut(s) 388, 1948
PaeR7I CTCGAG 1 cut(s) 1383
PagI TCATGA 2 cut(s) 57, 1402
PauI GCGCGC 1 cut(s) 1333
PciI ACATGT 1 cut(s) 1944
PctI GAATGC 3 cut(s) 563, 605, 1858
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 5 cut(s) 14, 486, 738, 1013, 1409
Pfl23II CGTACG 1 cut(s) 503
PkrI GCNGC 8 cut(s) 197, 302, 305, 308, 535, 538, 1416, 2009
PleI GAGTC 1 cut(s) 1468
PpsI GAGTC 1 cut(s) 1468
PscI ACATGT 1 cut(s) 1944
PshAI GACNNNNGTC 1 cut(s) 872
PshBI ATTAAT 1 cut(s) 63
Psp1406I AACGTT 1 cut(s) 1932
Psp6I CCWGG 3 cut(s) 85, 477, 979
PspGI CCWGG 3 cut(s) 85, 477, 979
PspLI CGTACG 1 cut(s) 503
PspN4I GGNNCC 2 cut(s) 1555, 1572
PspPI GGNCC 2 cut(s) 1306, 1554
PspXI VCTCGAGB 1 cut(s) 1383
PstI CTGCAG 1 cut(s) 538
PsuI RGATCY 2 cut(s) 1753, 1937
PteI GCGCGC 1 cut(s) 1333
PvuII CAGCTG 2 cut(s) 306, 539
RsaI GTAC 7 cut(s) 505, 510, 515, 580, 909, 1899, 2055
RsaNI GTAC 7 cut(s) 504, 509, 514, 579, 908, 1898, 2054
RseI CAYNNNNRTG 2 cut(s) 255, 1717
SaqAI TTAA 7 cut(s) 63, 963, 974, 1041, 1185, 1605, 1872
SatI GCNGC 8 cut(s) 196, 301, 304, 307, 534, 537, 1415, 2008
Sau3AI GATC 8 cut(s) 845, 852, 1435, 1519, 1753, 1937, 1993, 2043
Sau96I GGNCC 2 cut(s) 1306, 1554
SchI GAGTC 1 cut(s) 1468
ScrFI CCNGG 4 cut(s) 87, 479, 981, 1987
SduI GDGCHC 2 cut(s) 252, 1392
SfaNI GCATC 5 cut(s) 230, 1575, 1705, 1784, 1806
SfcI CTRYAG 2 cut(s) 534, 1618
Sfr274I CTCGAG 1 cut(s) 1383
SinI GGWCC 2 cut(s) 1306, 1554
SlaI CTCGAG 1 cut(s) 1383
SmiMI CAYNNNNRTG 2 cut(s) 255, 1717
SmlI CTYRAG 2 cut(s) 19, 1383
SmoI CTYRAG 2 cut(s) 19, 1383
SpeI ACTAGT 1 cut(s) 910
SspMI CTAG 5 cut(s) 723, 911, 1079, 1164, 2061
StyD4I CCNGG 4 cut(s) 85, 477, 979, 1985
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 5 cut(s) 508, 513, 772, 871, 1772
TaiI ACGT 1 cut(s) 1935
TaqI TCGA 5 cut(s) 741, 848, 1032, 1384, 1543
TaqII GACCGA 1 cut(s) 1571
TatI WGTACW 2 cut(s) 513, 2053
TauI GCSGC 3 cut(s) 198, 303, 1417
TfiI GAWTC 5 cut(s) 14, 486, 738, 1013, 1409
Tru1I TTAA 7 cut(s) 63, 963, 974, 1041, 1185, 1605, 1872
Tru9I TTAA 7 cut(s) 63, 963, 974, 1041, 1185, 1605, 1872
TscAI CASTG 2 cut(s) 652, 1146
TseFI GTSAC 5 cut(s) 689, 728, 772, 1676, 1885
TseI GCWGC 5 cut(s) 303, 306, 533, 536, 2007
Tsp45I GTSAC 5 cut(s) 689, 728, 772, 1676, 1885
TspGWI ACGGA 3 cut(s) 958, 1007, 1144
TspRI CASTG 2 cut(s) 652, 1146
VpaK11BI GGWCC 2 cut(s) 1306, 1554
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 3 cut(s) 557, 1159, 1174
XbaI TCTAGA 1 cut(s) 1163
XceI RCATGY 2 cut(s) 388, 1948
XcmI CCANNNNNNNNNTGG 1 cut(s) 1546
XhoI CTCGAG 1 cut(s) 1383
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 5 cut(s) 723, 911, 1079, 1164, 2061
Zsp2I ATGCAT 3 cut(s) 223, 607, 1799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.