Cysteine-rich receptor-like protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Stress-antifung | PF01657 | 84 - 176 | 1.1e-20 | Salt stress response/antifungal |
| Stress-antifung | PF01657 | 200 - 288 | 2.7e-08 | Salt stress response/antifungal |
| Pkinase | PF00069 | 366 - 555 | 7.4e-41 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 366 - 610 | 8.1e-38 | Protein tyrosine and serine/threonine kinase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 604 |
| AatII | GACGTC | 1 cut(s) | 200 |
| Acc16I | TGCGCA | 1 cut(s) | 732 |
| Acc36I | ACCTGC | 1 cut(s) | 604 |
| Acc65I | GGTACC | 1 cut(s) | 1529 |
| AccB1I | GGYRCC | 3 cut(s) | 1529, 1546, 2285 |
| AccI | GTMKAC | 1 cut(s) | 884 |
| AccII | CGCG | 3 cut(s) | 590, 1362, 2255 |
| AciI | CCGC | 8 cut(s) | 113, 140, 588, 599, 792, 1362, 2216, 2231 |
| AclWI | GGATC | 5 cut(s) | 121, 1292, 1503, 1724, 2129 |
| AcoI | YGGCCR | 1 cut(s) | 2245 |
| AcsI | RAATTY | 3 cut(s) | 636, 1157, 2046 |
| AcuI | CTGAAG | 5 cut(s) | 119, 642, 1089, 1579, 1815 |
| AcyI | GRCGYC | 2 cut(s) | 197, 1948 |
| AfaI | GTAC | 8 cut(s) | 257, 430, 516, 521, 866, 1531, 1645, 1871 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 68, 136, 631, 1311, 2234, 2282 |
| AflIII | ACRYGT | 1 cut(s) | 431 |
| AgsI | TTSAA | 5 cut(s) | 166, 1193, 1231, 1619, 2114 |
| AhlI | ACTAGT | 1 cut(s) | 1999 |
| AjnI | CCWGG | 2 cut(s) | 81, 1688 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1813, 1845 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 816, 848, 1341, 1373 |
| Alw21I | GWGCWC | 3 cut(s) | 558, 621, 740 |
| Alw26I | GTCTC | 5 cut(s) | 204, 399, 440, 639, 1990 |
| Alw44I | GTGCAC | 1 cut(s) | 736 |
| AlwI | GGATC | 5 cut(s) | 121, 1292, 1503, 1724, 2129 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 74, 2138 |
| Ama87I | CYCGRG | 1 cut(s) | 155 |
| AoxI | GGCC | 5 cut(s) | 152, 2185, 2225, 2237, 2245 |
| ApaI | GGGCCC | 1 cut(s) | 156 |
| ApaLI | GTGCAC | 1 cut(s) | 736 |
| ApeKI | GCWGC | 4 cut(s) | 267, 683, 1036, 2172 |
| ApoI | RAATTY | 3 cut(s) | 636, 1157, 2046 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 521, 553 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 469, 2109 |
| Asp718I | GGTACC | 1 cut(s) | 1529 |
| AspLEI | GCGC | 3 cut(s) | 733, 1572, 2257 |
| AspS9I | GGNCC | 4 cut(s) | 152, 153, 2195, 2237 |
| AsuC2I | CCSGG | 1 cut(s) | 705 |
| AsuHPI | GGTGA | 6 cut(s) | 16, 674, 1160, 1165, 1397, 1670 |
| AsuII | TTCGAA | 1 cut(s) | 1396 |
| AvaI | CYCGRG | 1 cut(s) | 155 |
| AvaII | GGWCC | 1 cut(s) | 2195 |
| BaeGI | GKGCMC | 3 cut(s) | 156, 740, 2290 |
| BanI | GGYRCC | 3 cut(s) | 1529, 1546, 2285 |
| BanII | GRGCYC | 3 cut(s) | 13, 156, 1989 |
| BbsI | GAAGAC | 3 cut(s) | 1358, 1585, 1643 |
| Bbv12I | GWGCWC | 3 cut(s) | 558, 621, 740 |
| BbvI | GCAGC | 4 cut(s) | 279, 695, 1048, 2159 |
| BccI | CCATC | 2 cut(s) | 2135, 2186 |
| BceAI | ACGGC | 4 cut(s) | 2172, 2232, 2240, 2255 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 365, 399 |
| BciT130I | CCWGG | 2 cut(s) | 83, 1690 |
| BciVI | GTATCC | 2 cut(s) | 701, 1532 |
| BclI | TGATCA | 1 cut(s) | 1282 |
| BcnI | CCSGG | 1 cut(s) | 705 |
| BcoDI | GTCTC | 5 cut(s) | 204, 399, 440, 639, 1990 |
| BcuI | ACTAGT | 1 cut(s) | 1999 |
| BfaI | CTAG | 4 cut(s) | 416, 2000, 2016, 2148 |
| BfmI | CTRYAG | 2 cut(s) | 611, 885 |
| BfoI | RGCGCY | 1 cut(s) | 1573 |
| BfuAI | ACCTGC | 1 cut(s) | 604 |
| BfuI | GTATCC | 2 cut(s) | 701, 1532 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2224 |
| BglII | AGATCT | 1 cut(s) | 1754 |
| BisI | GCNGC | 4 cut(s) | 268, 684, 1037, 2173 |
| BlpI | GCTNAGC | 1 cut(s) | 2163 |
| BlsI | GCNGC | 4 cut(s) | 269, 685, 1038, 2174 |
| Bme1390I | CCNGG | 3 cut(s) | 83, 705, 1690 |
| Bme18I | GGWCC | 1 cut(s) | 2195 |
| BmeT110I | CYCGRG | 1 cut(s) | 155 |
| BmgT120I | GGNCC | 4 cut(s) | 152, 153, 2195, 2237 |
| BmiI | GGNNCC | 6 cut(s) | 154, 370, 1247, 1531, 1548, 2287 |
| BmrFI | CCNGG | 3 cut(s) | 83, 705, 1690 |
| BmrI | ACTGGG | 1 cut(s) | 1333 |
| BmsI | GCATC | 5 cut(s) | 62, 279, 795, 1760, 1782 |
| BmuI | ACTGGG | 1 cut(s) | 1333 |
| BpiI | GAAGAC | 3 cut(s) | 1358, 1585, 1643 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 393, 425 |
| BpmI | CTGGAG | 4 cut(s) | 249, 900, 909, 1711 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2163 |
| Bpu14I | TTCGAA | 1 cut(s) | 1396 |
| BpuEI | CTTGAG | 4 cut(s) | 510, 1488, 1735, 2250 |
| BpuMI | CCSGG | 1 cut(s) | 705 |
| BsaAI | YACGTR | 2 cut(s) | 255, 432 |
| BsaHI | GRCGYC | 2 cut(s) | 197, 1948 |
| BsaI | GGTCTC | 1 cut(s) | 399 |
| BsaJI | CCNNGG | 2 cut(s) | 1040, 1824 |
| BsaWI | WCCGGW | 1 cut(s) | 61 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1341, 1371 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 68, 136, 631, 1311, 2234, 2282 |
| Bse118I | RCCGGY | 3 cut(s) | 37, 136, 2175 |
| Bse1I | ACTGG | 3 cut(s) | 1328, 1633, 2061 |
| Bse3DI | GCAATG | 1 cut(s) | 387 |
| BseBI | CCWGG | 2 cut(s) | 83, 1690 |
| BseDI | CCNNGG | 2 cut(s) | 1040, 1824 |
| BseGI | GGATG | 3 cut(s) | 1444, 1711, 1773 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 68, 136, 631, 1311, 2234, 2282 |
| BseMI | GCAATG | 1 cut(s) | 387 |
| BseMII | CTCAG | 6 cut(s) | 66, 451, 464, 1880, 1934, 2145 |
| BseNI | ACTGG | 3 cut(s) | 1328, 1633, 2061 |
| BseRI | GAGGAG | 9 cut(s) | 287, 292, 417, 563, 566, 1238, 2190, 2193, 2253 |
| BseSI | GKGCMC | 3 cut(s) | 156, 740, 2290 |
| BseXI | GCAGC | 4 cut(s) | 279, 695, 1048, 2159 |
| BseYI | CCCAGC | 1 cut(s) | 575 |
| BsgI | GTGCAG | 1 cut(s) | 418 |
| Bsh1236I | CGCG | 3 cut(s) | 590, 1362, 2255 |
| Bsh1285I | CGRYCG | 1 cut(s) | 25 |
| BshFI | GGCC | 5 cut(s) | 154, 2187, 2227, 2239, 2247 |
| BshNI | GGYRCC | 3 cut(s) | 1529, 1546, 2285 |
| BsiEI | CGRYCG | 1 cut(s) | 25 |
| BsiHKAI | GWGCWC | 3 cut(s) | 558, 621, 740 |
| BsiHKCI | CYCGRG | 1 cut(s) | 155 |
| BsiSI | CCGG | 6 cut(s) | 38, 62, 137, 704, 2124, 2176 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 68, 136, 631, 1311, 2234, 2282 |
| BsmAI | GTCTC | 5 cut(s) | 204, 399, 440, 639, 1990 |
| BsmBI | CGTCTC | 1 cut(s) | 204 |
| BsmI | GAATGC | 1 cut(s) | 388 |
| BsnI | GGCC | 5 cut(s) | 154, 2187, 2227, 2239, 2247 |
| Bso31I | GGTCTC | 1 cut(s) | 399 |
| BsoBI | CYCGRG | 1 cut(s) | 155 |
| Bsp119I | TTCGAA | 1 cut(s) | 1396 |
| Bsp120I | GGGCCC | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 7 cut(s) | 13, 156, 558, 621, 740, 1989, 2290 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2163 |
| Bsp19I | CCATGG | 1 cut(s) | 1824 |
| BspACI | CCGC | 8 cut(s) | 113, 140, 588, 599, 792, 1362, 2216, 2231 |
| BspANI | GGCC | 5 cut(s) | 154, 2187, 2227, 2239, 2247 |
| BspCNI | CTCAG | 6 cut(s) | 67, 450, 463, 1879, 1935, 2144 |
| BspFNI | CGCG | 3 cut(s) | 590, 1362, 2255 |
| BspLI | GGNNCC | 6 cut(s) | 154, 370, 1247, 1531, 1548, 2287 |
| BspMAI | CTGCAG | 1 cut(s) | 615 |
| BspMI | ACCTGC | 1 cut(s) | 604 |
| BspPI | GGATC | 5 cut(s) | 121, 1292, 1503, 1724, 2129 |
| BspT104I | TTCGAA | 1 cut(s) | 1396 |
| BspT107I | GGYRCC | 3 cut(s) | 1529, 1546, 2285 |
| BspTNI | GGTCTC | 1 cut(s) | 399 |
| BsrDI | GCAATG | 1 cut(s) | 387 |
| BsrFI | RCCGGY | 3 cut(s) | 37, 136, 2175 |
| BsrI | ACTGG | 3 cut(s) | 1328, 1633, 2061 |
| BssAI | RCCGGY | 3 cut(s) | 37, 136, 2175 |
| BssECI | CCNNGG | 2 cut(s) | 1040, 1824 |
| BssNI | GRCGYC | 2 cut(s) | 197, 1948 |
| BssT1I | CCWWGG | 1 cut(s) | 1824 |
| Bst2UI | CCWGG | 2 cut(s) | 83, 1690 |
| Bst4CI | ACNGT | 7 cut(s) | 26, 470, 519, 782, 869, 1409, 1849 |
| Bst6I | CTCTTC | 2 cut(s) | 358, 932 |
| BstACI | GRCGYC | 2 cut(s) | 197, 1948 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 692, 771 |
| BstBAI | YACGTR | 2 cut(s) | 255, 432 |
| BstBI | TTCGAA | 1 cut(s) | 1396 |
| BstC8I | GCNNGC | 7 cut(s) | 138, 192, 603, 1423, 2023, 2101, 2177 |
| BstDSI | CCRYGG | 2 cut(s) | 1040, 1824 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2232 |
| BstF5I | GGATG | 3 cut(s) | 1444, 1711, 1773 |
| BstFNI | CGCG | 3 cut(s) | 590, 1362, 2255 |
| BstH2I | RGCGCY | 1 cut(s) | 1573 |
| BstHHI | GCGC | 3 cut(s) | 733, 1572, 2257 |
| BstMAI | GTCTC | 5 cut(s) | 204, 399, 440, 639, 1990 |
| BstMCI | CGRYCG | 1 cut(s) | 25 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 692, 771, 926, 2012, 2224 |
| BstNI | CCWGG | 2 cut(s) | 83, 1690 |
| BstNSI | RCATGY | 3 cut(s) | 194, 695, 731 |
| BstSCI | CCNGG | 3 cut(s) | 81, 703, 1688 |
| BstSFI | CTRYAG | 2 cut(s) | 611, 885 |
| BstSLI | GKGCMC | 3 cut(s) | 156, 740, 2290 |
| BstSNI | TACGTA | 1 cut(s) | 255 |
| BstUI | CGCG | 3 cut(s) | 590, 1362, 2255 |
| BstV1I | GCAGC | 4 cut(s) | 279, 695, 1048, 2159 |
| BstV2I | GAAGAC | 3 cut(s) | 1358, 1585, 1643 |
| BstX2I | RGATCY | 3 cut(s) | 1729, 1754, 2134 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1892 |
| BstYI | RGATCY | 3 cut(s) | 1729, 1754, 2134 |
| BsuI | GTATCC | 2 cut(s) | 701, 1532 |
| BsuRI | GGCC | 5 cut(s) | 154, 2187, 2227, 2239, 2247 |
| BtgI | CCRYGG | 2 cut(s) | 1040, 1824 |
| BtsCI | GGATG | 3 cut(s) | 1444, 1711, 1773 |
| BtsI | GCAGTG | 2 cut(s) | 740, 817 |
| BtsIMutI | CAGTG | 2 cut(s) | 740, 817 |
| BveI | ACCTGC | 1 cut(s) | 604 |
| Cac8I | GCNNGC | 7 cut(s) | 138, 192, 603, 1423, 2023, 2101, 2177 |
| CaiI | CAGNNNCTG | 2 cut(s) | 74, 2138 |
| CfoI | GCGC | 3 cut(s) | 733, 1572, 2257 |
| Cfr10I | RCCGGY | 3 cut(s) | 37, 136, 2175 |
| Cfr13I | GGNCC | 4 cut(s) | 152, 153, 2195, 2237 |
| CseI | GACGC | 1 cut(s) | 1937 |
| Csp6I | GTAC | 8 cut(s) | 256, 429, 515, 520, 865, 1530, 1644, 1870 |
| CviQI | GTAC | 8 cut(s) | 256, 429, 515, 520, 865, 1530, 1644, 1870 |
| DraI | TTTAAA | 1 cut(s) | 1162 |
| EaeI | YGGCCR | 1 cut(s) | 2245 |
| Eam1104I | CTCTTC | 2 cut(s) | 358, 932 |
| EarI | CTCTTC | 2 cut(s) | 358, 932 |
| EciI | GGCGGA | 1 cut(s) | 155 |
| Eco105I | TACGTA | 1 cut(s) | 255 |
| Eco130I | CCWWGG | 1 cut(s) | 1824 |
| Eco24I | GRGCYC | 3 cut(s) | 13, 156, 1989 |
| Eco31I | GGTCTC | 1 cut(s) | 399 |
| Eco47I | GGWCC | 1 cut(s) | 2195 |
| Eco57I | CTGAAG | 5 cut(s) | 119, 642, 1089, 1579, 1815 |
| Eco88I | CYCGRG | 1 cut(s) | 155 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2232 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2237 |
| EcoRII | CCWGG | 2 cut(s) | 81, 1688 |
| EcoT14I | CCWWGG | 1 cut(s) | 1824 |
| EcoT22I | ATGCAT | 2 cut(s) | 1019, 1775 |
| EcoT38I | GRGCYC | 3 cut(s) | 13, 156, 1989 |
| ErhI | CCWWGG | 1 cut(s) | 1824 |
| Esp3I | CGTCTC | 1 cut(s) | 204 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 40, 72 |
| FauI | CCCGC | 2 cut(s) | 606, 2223 |
| FauNDI | CATATG | 1 cut(s) | 1013 |
| FbaI | TGATCA | 1 cut(s) | 1282 |
| FblI | GTMKAC | 1 cut(s) | 884 |
| Fnu4HI | GCNGC | 4 cut(s) | 268, 684, 1037, 2173 |
| FokI | GGATG | 3 cut(s) | 1451, 1718, 1760 |
| FriOI | GRGCYC | 3 cut(s) | 13, 156, 1989 |
| Fsp4HI | GCNGC | 4 cut(s) | 268, 684, 1037, 2173 |
| FspBI | CTAG | 4 cut(s) | 416, 2000, 2016, 2148 |
| FspI | TGCGCA | 1 cut(s) | 732 |
| GlaI | GCGC | 3 cut(s) | 732, 1571, 2256 |
| GluI | GCNGC | 4 cut(s) | 268, 684, 1037, 2173 |
| GsaI | CCCAGC | 1 cut(s) | 579 |
| GsuI | CTGGAG | 4 cut(s) | 249, 900, 909, 1711 |
| HaeII | RGCGCY | 1 cut(s) | 1573 |
| HaeIII | GGCC | 5 cut(s) | 154, 2187, 2227, 2239, 2247 |
| HapII | CCGG | 6 cut(s) | 38, 62, 137, 704, 2124, 2176 |
| HgaI | GACGC | 1 cut(s) | 1937 |
| HhaI | GCGC | 3 cut(s) | 733, 1572, 2257 |
| Hin1I | GRCGYC | 2 cut(s) | 197, 1948 |
| Hin6I | GCGC | 3 cut(s) | 731, 1570, 2255 |
| HinP1I | GCGC | 3 cut(s) | 731, 1570, 2255 |
| HincII | GTYRAC | 2 cut(s) | 29, 1740 |
| HindII | GTYRAC | 2 cut(s) | 29, 1740 |
| HpaI | GTTAAC | 1 cut(s) | 1740 |
| HpaII | CCGG | 6 cut(s) | 38, 62, 137, 704, 2124, 2176 |
| HphI | GGTGA | 6 cut(s) | 16, 674, 1160, 1165, 1397, 1670 |
| Hpy166II | GTNNAC | 5 cut(s) | 29, 258, 738, 885, 1740 |
| Hpy8I | GTNNAC | 5 cut(s) | 29, 258, 738, 885, 1740 |
| Hpy99I | CGWCG | 3 cut(s) | 136, 199, 2226 |
| HpyAV | CCTTC | 6 cut(s) | 94, 112, 1883, 2096, 2300, 2313 |
| HpyCH4III | ACNGT | 7 cut(s) | 26, 470, 519, 782, 869, 1409, 1849 |
| HpyCH4IV | ACGT | 3 cut(s) | 197, 254, 431 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 692, 771, 926, 2012, 2224 |
| HpySE526I | ACGT | 3 cut(s) | 197, 254, 431 |
| Hsp92I | GRCGYC | 2 cut(s) | 197, 1948 |
| HspAI | GCGC | 3 cut(s) | 731, 1570, 2255 |
| KpnI | GGTACC | 1 cut(s) | 1533 |
| KroI | GCCGGC | 2 cut(s) | 136, 2175 |
| KroNI | GCCGGC | 2 cut(s) | 138, 2177 |
| Ksp22I | TGATCA | 1 cut(s) | 1282 |
| KspAI | GTTAAC | 1 cut(s) | 1740 |
| LmnI | GCTCC | 6 cut(s) | 71, 230, 374, 553, 919, 1251 |
| Lsp1109I | GCAGC | 4 cut(s) | 279, 695, 1048, 2159 |
| LweI | GCATC | 5 cut(s) | 62, 279, 795, 1760, 1782 |
| MaeI | CTAG | 4 cut(s) | 416, 2000, 2016, 2148 |
| MaeII | ACGT | 3 cut(s) | 197, 254, 431 |
| MaeIII | GTNAC | 8 cut(s) | 64, 121, 941, 991, 1092, 1171, 1334, 2249 |
| MfeI | CAATTG | 1 cut(s) | 760 |
| MflI | RGATCY | 3 cut(s) | 1729, 1754, 2134 |
| MhlI | GDGCHC | 7 cut(s) | 13, 156, 558, 621, 740, 1989, 2290 |
| MlyI | GAGTC | 2 cut(s) | 437, 1038 |
| MmeI | TCCRAC | 4 cut(s) | 336, 396, 612, 1325 |
| Mph1103I | ATGCAT | 2 cut(s) | 1019, 1775 |
| MreI | CGCCGGCG | 1 cut(s) | 136 |
| MroNI | GCCGGC | 2 cut(s) | 136, 2175 |
| MroXI | GAANNNNTTC | 2 cut(s) | 469, 2109 |
| MslI | CAYNNNNRTG | 2 cut(s) | 971, 1115 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 6 cut(s) | 38, 62, 137, 704, 2124, 2176 |
| MspR9I | CCNGG | 3 cut(s) | 83, 705, 1690 |
| MunI | CAATTG | 1 cut(s) | 760 |
| Mva1269I | GAATGC | 1 cut(s) | 388 |
| MvaI | CCWGG | 2 cut(s) | 83, 1690 |
| MvnI | CGCG | 3 cut(s) | 590, 1362, 2255 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 692, 771, 926, 2012, 2224 |
| NaeI | GCCGGC | 2 cut(s) | 138, 2177 |
| NciI | CCSGG | 1 cut(s) | 705 |
| NcoI | CCATGG | 1 cut(s) | 1824 |
| NdeI | CATATG | 1 cut(s) | 1013 |
| NgoMIV | GCCGGC | 2 cut(s) | 136, 2175 |
| NlaIV | GGNNCC | 6 cut(s) | 154, 370, 1247, 1531, 1548, 2287 |
| NmuCI | GTSAC | 4 cut(s) | 64, 991, 1171, 2249 |
| NsbI | TGCGCA | 1 cut(s) | 732 |
| NsiI | ATGCAT | 2 cut(s) | 1019, 1775 |
| NspI | RCATGY | 3 cut(s) | 194, 695, 731 |
| NspV | TTCGAA | 1 cut(s) | 1396 |
| PaeI | GCATGC | 1 cut(s) | 194 |
| PaqCI | CACCTGC | 1 cut(s) | 604 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2100 |
| PctI | GAATGC | 1 cut(s) | 388 |
| PdiI | GCCGGC | 2 cut(s) | 138, 2177 |
| PdmI | GAANNNNTTC | 2 cut(s) | 469, 2109 |
| PflFI | GACNNNGTC | 1 cut(s) | 755 |
| PfoI | TCCNGGA | 1 cut(s) | 703 |
| PkrI | GCNGC | 4 cut(s) | 269, 685, 1038, 2174 |
| PleI | GAGTC | 2 cut(s) | 437, 1037 |
| PpsI | GAGTC | 2 cut(s) | 437, 1037 |
| Ppu21I | YACGTR | 2 cut(s) | 255, 432 |
| Psp6I | CCWGG | 2 cut(s) | 81, 1688 |
| PspFI | CCCAGC | 1 cut(s) | 575 |
| PspGI | CCWGG | 2 cut(s) | 81, 1688 |
| PspN4I | GGNNCC | 6 cut(s) | 154, 370, 1247, 1531, 1548, 2287 |
| PspOMI | GGGCCC | 1 cut(s) | 152 |
| PspPI | GGNCC | 4 cut(s) | 152, 153, 2195, 2237 |
| PstI | CTGCAG | 1 cut(s) | 615 |
| PstNI | CAGNNNCTG | 2 cut(s) | 74, 2138 |
| PsuI | RGATCY | 3 cut(s) | 1729, 1754, 2134 |
| PsyI | GACNNNGTC | 1 cut(s) | 755 |
| RsaI | GTAC | 8 cut(s) | 257, 430, 516, 521, 866, 1531, 1645, 1871 |
| RsaNI | GTAC | 8 cut(s) | 256, 429, 515, 520, 865, 1530, 1644, 1870 |
| RseI | CAYNNNNRTG | 2 cut(s) | 971, 1115 |
| SatI | GCNGC | 4 cut(s) | 268, 684, 1037, 2173 |
| Sau96I | GGNCC | 4 cut(s) | 152, 153, 2195, 2237 |
| SbfI | CCTGCAGG | 1 cut(s) | 615 |
| SchI | GAGTC | 2 cut(s) | 437, 1038 |
| ScrFI | CCNGG | 3 cut(s) | 83, 705, 1690 |
| SdaI | CCTGCAGG | 1 cut(s) | 615 |
| SduI | GDGCHC | 7 cut(s) | 13, 156, 558, 621, 740, 1989, 2290 |
| SfaNI | GCATC | 5 cut(s) | 62, 279, 795, 1760, 1782 |
| SfcI | CTRYAG | 2 cut(s) | 611, 885 |
| SfuI | TTCGAA | 1 cut(s) | 1396 |
| SgrAI | CRCCGGYG | 1 cut(s) | 136 |
| SinI | GGWCC | 1 cut(s) | 2195 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 971, 1115 |
| SmlI | CTYRAG | 4 cut(s) | 525, 1503, 1750, 2265 |
| SmoI | CTYRAG | 4 cut(s) | 525, 1503, 1750, 2265 |
| SnaBI | TACGTA | 1 cut(s) | 255 |
| SpeI | ACTAGT | 1 cut(s) | 1999 |
| SphI | GCATGC | 1 cut(s) | 194 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 615 |
| SsiI | CCGC | 8 cut(s) | 113, 140, 588, 599, 792, 1362, 2216, 2231 |
| SspI | AATATT | 2 cut(s) | 537, 907 |
| SspMI | CTAG | 4 cut(s) | 416, 2000, 2016, 2148 |
| StyD4I | CCNGG | 3 cut(s) | 81, 703, 1688 |
| StyI | CCWWGG | 1 cut(s) | 1824 |
| TaaI | ACNGT | 7 cut(s) | 26, 470, 519, 782, 869, 1409, 1849 |
| TaiI | ACGT | 3 cut(s) | 200, 257, 434 |
| TaqI | TCGA | 7 cut(s) | 21, 211, 670, 1390, 1396, 2077, 2221 |
| TscAI | CASTG | 2 cut(s) | 740, 817 |
| TseFI | GTSAC | 4 cut(s) | 64, 991, 1171, 2249 |
| TseI | GCWGC | 4 cut(s) | 267, 683, 1036, 2172 |
| Tsp45I | GTSAC | 4 cut(s) | 64, 991, 1171, 2249 |
| TspDTI | ATGAA | 9 cut(s) | 462, 1182, 1254, 1272, 1279, 1395, 1455, 1463, 1680 |
| TspGWI | ACGGA | 2 cut(s) | 497, 1100 |
| TspRI | CASTG | 2 cut(s) | 740, 817 |
| Tth111I | GACNNNGTC | 1 cut(s) | 755 |
| VneI | GTGCAC | 1 cut(s) | 736 |
| VpaK11BI | GGWCC | 1 cut(s) | 2195 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2232 |
| XapI | RAATTY | 3 cut(s) | 636, 1157, 2046 |
| XbaI | TCTAGA | 1 cut(s) | 2147 |
| XceI | RCATGY | 3 cut(s) | 194, 695, 731 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 335 |
| XmiI | GTMKAC | 1 cut(s) | 884 |
| XmnI | GAANNNNTTC | 2 cut(s) | 469, 2109 |
| XspI | CTAG | 4 cut(s) | 416, 2000, 2016, 2148 |
| ZraI | GACGTC | 1 cut(s) | 198 |
| Zsp2I | ATGCAT | 2 cut(s) | 1019, 1775 |