Rw6G034630

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000086
Physical Location & Seq
Reverse (-)
59307329 .. 59318674
11346 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034630.1

Sequence Viewer

Length: 3825 bp
ATGGATTCCCCATCAACCTTTGGGTTCTTCTTGTCAATACAACTTGTGTTTCTCCTAGCTCAATCCGATCAGTCACCTTTAATAGACAGCTTTTGCGGCCAGAACGGTAACTACACAGCGGGTAGCACCTATCAGACAAACCTCAACAACCTTCTCGGTTCTCTTTCCTCCCCCGGCAACGATAACGGCTACGGCTTCTACAGTTCCTCCGTTGGAGTAAACTCTGACAAAGTTAATGCATTCGGCCTCTGCAGAGGAGATGTCAAGGCTGGTGATTGCGAAAGTTGCGTCAGCCTAGCTAGTGATCCTCTCAAAAGAGCATGTCCTGTCCAGAAGGAGGCCATTATATGGTACGACTATTGCATGTTGCGCTACTCGAATGAATCATTATATGGCATCGTGACAACAGACCCTGCTGTGTTTCTGTCCAACACACAAAACGTTTCGTCACCGGATGAGTTCAATCGGCAGCTGAAGTTGTTATTGGAAGGACTAATTAGTAAAGCTGCAGCAGGAGGTACTGATAGGAAGTTTTCACTGGGCACAAACACAACCGCCAGCTTTGTAACAATATATGGACTTGCACAGTGTACTCCAGATTTGTCGCTGGAAGAATGCACTCAATGCTTAAATGCAGCGTTGGCACAAATCCCACTATATAGTTATGGGAAGATTGGTGGGAATGCTGCTGATGCACCCGCTCCATCGCCACAATTAGAAACACCAGTCTCTCCTCCTCCACCACAACCGTCAGGAAAGAAGAAGAACAATACATCTCGGAACATCATCATTGCGGTGACAATTGTTGTTTCTCTGGCACTGATTGCATTGGCAATTTGGATTTATCTGAGATTTTGGAAGACAAAGAAACCACTTGACGCAGATGATATTATGAGCGCAGAAGCCTTGCAATACGAGTTTGATTCTATTAGAGTTGCTACAAATAACTTTTCTGAAGCAAATAAGCTTGGACGAGGCGGATTTGGTGTTGTTTATAGGGGAAGGCTTTGGAATGAAGAGGAGATAGCAGTGAAAAGGCTCTCCAGAGATTCTACACAAGGAGATATAGAATTTAAAAATGAGGTGGTGCTAGTAGCAAAGCTTCAACATCGAAATTTAGTTAGGCTCCTTGGTTTCTGTCTGGAGAGAAATGAAAGACTTCTTGTCTATGAGTTTGTCCCAAATGCAAGTCTTGATCACTTCGTATTTGATCCAATCAAACGTGAACAGTTGGATTGGGATATTCGCTACAAGATCATAGTAGGCATTGGGCGAGGACTCCTTTACCTTCATGAAGATTCTCGTCTTAGAATTATCCATCGCGATCTCAAAGCAAGTAACATTTTATTAGATGCAGAAATGAACCCCAAAATTGCAGATTTTGGCATGGCAAAATTATTTAATATCGATCAAACACAAGGCGAAACCAGTCGAGTTGTGGGAACGTATGGATATATGGCTCCTGAATATGTAATGCGCGGACATTTTTCTGTGAAGTCCGATGTCTATAGCTTTGGTGTGTTGGTTTTGGAGATAGTAAGCGGACAGAAAAATAGCTCTTTTCATCATGAAGGAAATTTGGAGGATCTTCTAGGCTATGCATGGAATAGTTGGAAGGAGGGGACATCTTCAAATTTGATAGATCCCATGTTGAGGACTGGTTCGAGGCCTGAAATAGTGAGATGCATCCATATTGGATTGTTATGTGTTCAACAAAGCATAGGTGATAGACCAACCATGGCTGCAGTCATTCAAATGCTTACCAGCAACTCTGATGATCTCCCAGTACCCTCACAACCAGCATTTTATATGTATAATCAAGGCATTGGATCCTCATCCGACATGTCATTGGGAATTGAGAGCAAAATGGTTTCCCCATCAACCTGTGGGCTCTTCCTGTCAATACAACTTGTATTGCTCCTAGCTCAAGACGATCAGTCACGTTTTATATACAACTTTTGCAGCATGAACGGTAACTACACCCCCGGTAGCACCTATCAGACAAACCTGAACAATCTTCTCGGTTCTCTTTCCTCCACCAGCAACGATAACGGCAACGGTTTCTACAGTTCCTCCGTTGGAGTAAACTCCGACAAAGTTAATGCATTCGGCCTCTGCAGAGGAGATGTCAAGGCTGGTGATTGCGAAAGTTGCGTCAGACAAGCTATTGATCCTCTCAAAAGAGCTTGTCCTGTCCAGAAGGAGGCCATTATATGGTACGACTATTGCATGTTACGCTACTCGAATGAATCATTACATGGCATCGTGACAAATTACCCTGCTGTGTTTCTGTCCAACACACAAAACGTTTCGTCACCGGATGAGTTCAATCGGCAGCTGAAGTTGTTATTGGAAGGACTAATTACTAAAGCTGCAGCAGGAGGTACTGATAGGAAGTTTGAACGGGGCACAAACACAACCGCCAGCTCTGTAAAAATATATGGATCTGCACAGTGTACTCCAGATTTATCGCTGGAAGAATGCACCCAATGCTTAAATGCAGCGTTGGCACAAATCCCACTATATAGTAATGGGAAGAAAGGTGGGACTGCTGTTGCACCAAGTTGTATCTTAAGGTATGAAGAATACGACTTCTTTTACCCCGCGGCTGATGCACCCGCTTCGTCGCCACAATTAGAAACACCAGTCTCTCCTCCTCCACCAGAACCGCCAGGAAAGAAGAAGAACAATACATCTCGGAACATCATCATTGCGGTGACAATCGTTGTTTCTCTGGCACTGATGGCATTGGCAATTTGGATTTATCTGAGATTTTGGAAGACAAAGAAACCACTTGAAGAAGCAGATGAAATTATGAGCGCAGAAGCCTTGCAATTCGAGTTTGATTCCATTAGAATTGCTACAAATAACTTTTCTGAAGCAAATAAGCTTGGACGAGGAGGATTTGGTGCTGTTTATAAGGGTAGGCTTTGGAACGAAGAGGAGATAGCAGTTAAAAGGCTCTCCAGAGATTCTGCACAAGGAGATATAGAATTTAAAAATGAGGTGGTGCTAGTGGCAAAGCTTCAACATCGAAATTTAGTTAGGCTCCTTGGTTTCTGTCTGGAGAGAAATGAAAGACTTCTTGTCTATGAGTTTGTCCCAAATGCAAGTCTTGATCATTTCGTATTTGATCCAATCAAGCGTGAACAGTTGGATTGGGAAATTCGCTACAAGATTATACTAGGGATTGGGCGAGGACTCCTTTACCTTCATGAAGATTCTCGTCTTAGAATTATCCATCGTGATCTCAAAGCGAGTAATATTTTATTAGATGCAGAAATGAACCCCAAAATTGCAGATTTTGGTATGGCAAGATTGTTTAATATCGATCAAACACAAGGCGAAACCAGTCGAGTTGTGGGAACTTATGGATATATGGCTCCTGAGTATGTAATGCGTGGACATTTTTCTGTGAAGTCCGATGTCTATAGCTTTGGTGTGTTGGTTTTGGAGATAGTAAGCGGACAGAAAAATAGCTCTTTTCGTCATGAAGGAAATTTGGAGGATCTTCTAGGCTATGCATGGAATTGTTGGAAGGGAGGGACATCTTCAAATTTGATAGATCCCATGTTGAGGACTGGTTCGAGGCCTGAAATAGTGAGATGCATCCATATTGGATTGTTATGTGTTCAACAAAGCATAGGTGATAGACCAACCATGGCTGCAGTTATTCAAATGCTTACCAGCAACTCTGTTAATCTCCCAGTACCCTCACAACCAGCATTTTATATGTATAATCAAGGCGTTGGATCCTCATCCGACATGTCGTTGGGATTTGAGAGTAACTCAGGATTGACATGCTGTTCTTTGATTTTCTTTTGA

Protein Analysis

1274

Amino Acids

140.82

Weight (kDa)

5.72

Isoelectric Point (pI)

44.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 32 - 128 2.2e-25 Salt stress response/antifungal
Stress-antifung PF01657 146 - 215 3.1e-08 Salt stress response/antifungal
Pkinase PF00069 318 - 520 1.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 320 - 585 3.7e-45 Protein tyrosine and serine/threonine kinase
Stress-antifung PF01657 654 - 750 3.2e-26 Salt stress response/antifungal
Stress-antifung PF01657 768 - 863 3.1e-12 Salt stress response/antifungal
Pkinase PF00069 959 - 1160 8.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 961 - 1179 2.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2919
AccB7I CCANNNNNTGG 2 cut(s) 348, 2214
AccBSI CCGCTC 1 cut(s) 701
AccII CGCG 3 cut(s) 1323, 1479, 2606
AclI AACGTT 2 cut(s) 441, 2307
AcoI YGGCCR 1 cut(s) 97
AcsI RAATTY 9 cut(s) 1070, 1114, 1576, 1633, 2993, 3037, 3165, 3499, 3556
AcuI CTGAAG 4 cut(s) 494, 975, 2360, 2898
AfaI GTAC 8 cut(s) 353, 520, 592, 1788, 2219, 2386, 2458, 3711
AfiI CCNNNNNNNGG 6 cut(s) 337, 348, 1653, 2203, 2214, 3576
AflII CTTAAG 1 cut(s) 2572
AflIII ACRYGT 2 cut(s) 1842, 3765
AhdI GACNNNNNGTC 3 cut(s) 1163, 1936, 3086
AjnI CCWGG 1 cut(s) 2671
AjuI GAANNNNNNNTTGG 4 cut(s) 467, 499, 2333, 2365
Alw26I GTCTC 2 cut(s) 733, 2653
AlwNI CAGNNNCTG 1 cut(s) 413
AoxI GGCC 7 cut(s) 97, 244, 339, 1667, 2110, 2205, 3590
ApoI RAATTY 9 cut(s) 1070, 1114, 1576, 1633, 2993, 3037, 3165, 3499, 3556
ArsI GACNNNNNNTTYG 4 cut(s) 273, 305, 2139, 2171
Asp700I GAANNNNTTC 2 cut(s) 1158, 3081
AspLEI GCGC 4 cut(s) 372, 899, 1479, 2822
AsuC2I CCSGG 2 cut(s) 174, 1986
AsuHPI GGTGA 9 cut(s) 66, 284, 441, 808, 1736, 2150, 2307, 2728, 3659
BaeGI GKGCMC 2 cut(s) 545, 2411
BamHI GGATCC 2 cut(s) 1829, 3752
BanII GRGCYC 1 cut(s) 1893
BarI GAAGNNNNNNTAC 2 cut(s) 1086, 1118
BbsI GAAGAC 2 cut(s) 866, 2786
BccI CCATC 6 cut(s) 19, 712, 1326, 1885, 2737, 3249
BceAI ACGGC 3 cut(s) 202, 208, 2068
BcgI CGANNNNNNTGC 2 cut(s) 2604, 2638
BciT130I CCWGG 1 cut(s) 2673
BclI TGATCA 2 cut(s) 1195, 3118
BcnI CCSGG 2 cut(s) 174, 1986
BcoDI GTCTC 2 cut(s) 733, 2653
BfaI CTAG 9 cut(s) 56, 296, 300, 1091, 1592, 1922, 3014, 3185, 3515
BfrI CTTAAG 1 cut(s) 2572
Bme1390I CCNGG 3 cut(s) 174, 1986, 2673
BmeRI GACNNNNNGTC 3 cut(s) 1163, 1936, 3086
BmiI GGNNCC 6 cut(s) 1127, 1461, 1831, 3050, 3384, 3754
BmrFI CCNGG 3 cut(s) 174, 1986, 2673
BmrI ACTGGG 3 cut(s) 548, 1778, 3701
BmuI ACTGGG 3 cut(s) 548, 1778, 3701
BpiI GAAGAC 2 cut(s) 866, 2786
BplI GAGNNNNNCTC 2 cut(s) 3773, 3805
BpmI CTGGAG 6 cut(s) 579, 1027, 1163, 2445, 2950, 3086
BpuEI CTTGAG 1 cut(s) 1911
BpuMI CCSGG 2 cut(s) 174, 1986
Bsa29I ATCGAT 2 cut(s) 1407, 3330
BsaBI GATNNNNATC 2 cut(s) 1834, 3757
BsaJI CCNNGG 7 cut(s) 172, 1129, 1737, 1984, 2604, 3052, 3660
BsaWI WCCGGW 2 cut(s) 451, 2317
BsaXI ACNNNNNCTCC 4 cut(s) 191, 221, 2057, 2087
Bsc4I CCNNNNNNNGG 6 cut(s) 337, 348, 1653, 2203, 2214, 3576
Bse1I ACTGG 9 cut(s) 543, 725, 1428, 1663, 1784, 2645, 3351, 3586, 3707
Bse3DI GCAATG 2 cut(s) 789, 2709
Bse8I GATNNNNATC 2 cut(s) 1834, 3757
BseBI CCWGG 1 cut(s) 2673
BseCI ATCGAT 2 cut(s) 1407, 3330
BseDI CCNNGG 7 cut(s) 172, 1129, 1737, 1984, 2604, 3052, 3660
BseGI GGATG 6 cut(s) 460, 1686, 1835, 2326, 3609, 3758
BseJI GATNNNNATC 2 cut(s) 1834, 3757
BseLI CCNNNNNNNGG 6 cut(s) 337, 348, 1653, 2203, 2214, 3576
BseMI GCAATG 2 cut(s) 789, 2709
BseMII CTCAG 4 cut(s) 839, 2759, 3378, 3804
BseNI ACTGG 9 cut(s) 543, 725, 1428, 1663, 1784, 2645, 3351, 3586, 3707
BseRI GAGGAG 9 cut(s) 270, 723, 726, 1034, 2136, 2643, 2646, 2913, 2957
BseSI GKGCMC 2 cut(s) 545, 2411
BsgI GTGCAG 2 cut(s) 2433, 2961
Bsh1236I CGCG 3 cut(s) 1323, 1479, 2606
BshFI GGCC 7 cut(s) 99, 246, 341, 1669, 2112, 2207, 3592
BshVI ATCGAT 2 cut(s) 1407, 3330
BsiSI CCGG 4 cut(s) 174, 452, 1986, 2318
BslFI GGGAC 5 cut(s) 1163, 1636, 2560, 3086, 3559
BslI CCNNNNNNNGG 6 cut(s) 337, 348, 1653, 2203, 2214, 3576
BsmAI GTCTC 2 cut(s) 733, 2653
BsmFI GGGAC 5 cut(s) 1163, 1636, 2560, 3086, 3559
BsmI GAATGC 5 cut(s) 239, 620, 688, 2105, 2486
BsnI GGCC 7 cut(s) 99, 246, 341, 1669, 2112, 2207, 3592
Bsp1286I GDGCHC 3 cut(s) 545, 1893, 2411
Bsp19I CCATGG 2 cut(s) 1737, 3660
Bsp68I TCGCGA 1 cut(s) 1323
BspANI GGCC 7 cut(s) 99, 246, 341, 1669, 2112, 2207, 3592
BspCNI CTCAG 4 cut(s) 840, 2760, 3379, 3803
BspDI ATCGAT 2 cut(s) 1407, 3330
BspFNI CGCG 3 cut(s) 1323, 1479, 2606
BspHI TCATGA 4 cut(s) 1291, 1567, 3214, 3490
BspLI GGNNCC 6 cut(s) 1127, 1461, 1831, 3050, 3384, 3754
BspMAI CTGCAG 6 cut(s) 254, 511, 1747, 2120, 2377, 3670
BspQI GCTCTTC 1 cut(s) 1898
BspTI CTTAAG 1 cut(s) 2572
BsrBI CCGCTC 1 cut(s) 701
BsrDI GCAATG 2 cut(s) 789, 2709
BsrI ACTGG 9 cut(s) 543, 725, 1428, 1663, 1784, 2645, 3351, 3586, 3707
BssECI CCNNGG 7 cut(s) 172, 1129, 1737, 1984, 2604, 3052, 3660
BssT1I CCWWGG 4 cut(s) 1129, 1737, 3052, 3660
Bst2UI CCWGG 1 cut(s) 2673
Bst6I CTCTTC 3 cut(s) 1011, 1898, 2934
BstAFI CTTAAG 1 cut(s) 2572
BstAPI GCANNNNNTGC 3 cut(s) 624, 824, 2490
BstC8I GCNNGC 2 cut(s) 559, 2425
BstDEI CTNAG 6 cut(s) 848, 1307, 2768, 3230, 3387, 3790
BstDSI CCRYGG 3 cut(s) 1737, 2604, 3660
BstF5I GGATG 6 cut(s) 460, 1686, 1835, 2326, 3609, 3758
BstFNI CGCG 3 cut(s) 1323, 1479, 2606
BstHHI GCGC 4 cut(s) 372, 899, 1479, 2822
BstMAI GTCTC 2 cut(s) 733, 2653
BstNI CCWGG 1 cut(s) 2673
BstNSI RCATGY 6 cut(s) 324, 367, 1846, 2233, 3769, 3804
BstSCI CCNGG 3 cut(s) 172, 1984, 2671
BstSLI GKGCMC 2 cut(s) 545, 2411
BstUI CGCG 3 cut(s) 1323, 1479, 2606
BstV2I GAAGAC 2 cut(s) 866, 2786
BstX2I RGATCY 7 cut(s) 1585, 1642, 1829, 2444, 3508, 3565, 3752
BstYI RGATCY 7 cut(s) 1585, 1642, 1829, 2444, 3508, 3565, 3752
Bsu15I ATCGAT 2 cut(s) 1407, 3330
BsuRI GGCC 7 cut(s) 99, 246, 341, 1669, 2112, 2207, 3592
BsuTUI ATCGAT 2 cut(s) 1407, 3330
BtgI CCRYGG 3 cut(s) 1737, 2604, 3660
BtgZI GCGATG 2 cut(s) 690, 1304
BtsCI GGATG 6 cut(s) 460, 1686, 1835, 2326, 3609, 3758
BtsI GCAGTG 1 cut(s) 1035
BtsIMutI CAGTG 6 cut(s) 536, 593, 818, 1035, 2459, 2738
BtuMI TCGCGA 1 cut(s) 1323
Cac8I GCNNGC 2 cut(s) 559, 2425
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 4 cut(s) 1291, 1567, 3214, 3490
CfoI GCGC 4 cut(s) 372, 899, 1479, 2822
Cfr42I CCGCGG 1 cut(s) 2607
ClaI ATCGAT 2 cut(s) 1407, 3330
CseI GACGC 3 cut(s) 277, 887, 2143
Csp6I GTAC 8 cut(s) 352, 519, 591, 1787, 2218, 2385, 2457, 3710
CviQI GTAC 8 cut(s) 352, 519, 591, 1787, 2218, 2385, 2457, 3710
DdeI CTNAG 6 cut(s) 848, 1307, 2768, 3230, 3387, 3790
DraI TTTAAA 2 cut(s) 1075, 2998
DriI GACNNNNNGTC 3 cut(s) 1163, 1936, 3086
EaeI YGGCCR 1 cut(s) 97
Eam1104I CTCTTC 3 cut(s) 1011, 1898, 2934
Eam1105I GACNNNNNGTC 3 cut(s) 1163, 1936, 3086
EarI CTCTTC 3 cut(s) 1011, 1898, 2934
EciI GGCGGA 1 cut(s) 993
Eco130I CCWWGG 4 cut(s) 1129, 1737, 3052, 3660
Eco147I AGGCCT 2 cut(s) 1669, 3592
Eco24I GRGCYC 1 cut(s) 1893
Eco57I CTGAAG 4 cut(s) 494, 975, 2360, 2898
EcoRII CCWGG 1 cut(s) 2671
EcoT14I CCWWGG 4 cut(s) 1129, 1737, 3052, 3660
EcoT22I ATGCAT 6 cut(s) 241, 1603, 1688, 2107, 3526, 3611
EcoT38I GRGCYC 1 cut(s) 1893
ErhI CCWWGG 4 cut(s) 1129, 1737, 3052, 3660
FaqI GGGAC 5 cut(s) 1163, 1636, 2560, 3086, 3559
FauI CCCGC 4 cut(s) 112, 706, 2611, 2626
FbaI TGATCA 2 cut(s) 1195, 3118
FokI GGATG 6 cut(s) 467, 1673, 1822, 2333, 3596, 3745
FriOI GRGCYC 1 cut(s) 1893
FspBI CTAG 9 cut(s) 56, 296, 300, 1091, 1592, 1922, 3014, 3185, 3515
GlaI GCGC 4 cut(s) 371, 898, 1478, 2821
GsuI CTGGAG 6 cut(s) 579, 1027, 1163, 2445, 2950, 3086
HaeIII GGCC 7 cut(s) 99, 246, 341, 1669, 2112, 2207, 3592
HapII CCGG 4 cut(s) 174, 452, 1986, 2318
HgaI GACGC 3 cut(s) 277, 887, 2143
HhaI GCGC 4 cut(s) 372, 899, 1479, 2822
Hin6I GCGC 4 cut(s) 370, 897, 1477, 2820
HinP1I GCGC 4 cut(s) 370, 897, 1477, 2820
HindIII AAGCTT 4 cut(s) 965, 1100, 2888, 3023
HpaII CCGG 4 cut(s) 174, 452, 1986, 2318
HphI GGTGA 9 cut(s) 66, 284, 441, 808, 1736, 2150, 2307, 2728, 3659
Hpy166II GTNNAC 7 cut(s) 220, 591, 1226, 2086, 2457, 3149, 3404
Hpy8I GTNNAC 7 cut(s) 220, 591, 1226, 2086, 2457, 3149, 3404
Hpy99I CGWCG 1 cut(s) 2629
HpyCH4IV ACGT 5 cut(s) 441, 1222, 1445, 1942, 2307
HpyF3I CTNAG 6 cut(s) 848, 1307, 2768, 3230, 3387, 3790
HpySE526I ACGT 5 cut(s) 441, 1222, 1445, 1942, 2307
HspAI GCGC 4 cut(s) 370, 897, 1477, 2820
Ksp22I TGATCA 2 cut(s) 1195, 3118
KspI CCGCGG 1 cut(s) 2607
LguI GCTCTTC 1 cut(s) 1898
LmnI GCTCC 6 cut(s) 706, 1131, 1465, 1923, 3054, 3388
MaeI CTAG 9 cut(s) 56, 296, 300, 1091, 1592, 1922, 3014, 3185, 3515
MaeII ACGT 5 cut(s) 441, 1222, 1445, 1942, 2307
MbiI CCGCTC 1 cut(s) 701
MfeI CAATTG 1 cut(s) 801
MflI RGATCY 7 cut(s) 1585, 1642, 1829, 2444, 3508, 3565, 3752
MhlI GDGCHC 3 cut(s) 545, 1893, 2411
MlyI GAGTC 2 cut(s) 1272, 3195
Mph1103I ATGCAT 6 cut(s) 241, 1603, 1688, 2107, 3526, 3611
MroXI GAANNNNTTC 2 cut(s) 1158, 3081
MslI CAYNNNNRTG 3 cut(s) 794, 1754, 2714
MspA1I CMGCKG 4 cut(s) 119, 472, 2338, 2606
MspCI CTTAAG 1 cut(s) 2572
MspI CCGG 4 cut(s) 174, 452, 1986, 2318
MspR9I CCNGG 3 cut(s) 174, 1986, 2673
MunI CAATTG 1 cut(s) 801
Mva1269I GAATGC 5 cut(s) 239, 620, 688, 2105, 2486
MvaI CCWGG 1 cut(s) 2673
MvnI CGCG 3 cut(s) 1323, 1479, 2606
NciI CCSGG 2 cut(s) 174, 1986
NcoI CCATGG 2 cut(s) 1737, 3660
NlaIV GGNNCC 6 cut(s) 1127, 1461, 1831, 3050, 3384, 3754
NmuCI GTSAC 8 cut(s) 72, 400, 447, 796, 1938, 2266, 2313, 2716
NruI TCGCGA 1 cut(s) 1323
NsiI ATGCAT 6 cut(s) 241, 1603, 1688, 2107, 3526, 3611
NspI RCATGY 6 cut(s) 324, 367, 1846, 2233, 3769, 3804
PagI TCATGA 4 cut(s) 1291, 1567, 3214, 3490
PceI AGGCCT 2 cut(s) 1669, 3592
PciI ACATGT 2 cut(s) 1842, 3765
PciSI GCTCTTC 1 cut(s) 1898
PctI GAATGC 5 cut(s) 239, 620, 688, 2105, 2486
PdmI GAANNNNTTC 2 cut(s) 1158, 3081
PfeI GAWTC 9 cut(s) 5, 383, 923, 1049, 1298, 2249, 2846, 2972, 3221
PflMI CCANNNNNTGG 2 cut(s) 348, 2214
PleI GAGTC 2 cut(s) 1272, 3195
PpsI GAGTC 2 cut(s) 1272, 3195
PscI ACATGT 2 cut(s) 1842, 3765
PsiI TTATAA 1 cut(s) 2919
Psp1406I AACGTT 2 cut(s) 441, 2307
Psp6I CCWGG 1 cut(s) 2671
PspGI CCWGG 1 cut(s) 2671
PspN4I GGNNCC 6 cut(s) 1127, 1461, 1831, 3050, 3384, 3754
PsrI GAACNNNNNNTAC 4 cut(s) 95, 127, 1961, 1993
PstI CTGCAG 6 cut(s) 254, 511, 1747, 2120, 2377, 3670
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 7 cut(s) 1585, 1642, 1829, 2444, 3508, 3565, 3752
PvuII CAGCTG 2 cut(s) 472, 2338
RruI TCGCGA 1 cut(s) 1323
RsaI GTAC 8 cut(s) 353, 520, 592, 1788, 2219, 2386, 2458, 3711
RsaNI GTAC 8 cut(s) 352, 519, 591, 1787, 2218, 2385, 2457, 3710
RseI CAYNNNNRTG 3 cut(s) 794, 1754, 2714
SacII CCGCGG 1 cut(s) 2607
SapI GCTCTTC 1 cut(s) 1898
SchI GAGTC 2 cut(s) 1272, 3195
ScrFI CCNGG 3 cut(s) 174, 1986, 2673
SduI GDGCHC 3 cut(s) 545, 1893, 2411
Sfr303I CCGCGG 1 cut(s) 2607
SgrBI CCGCGG 1 cut(s) 2607
SmiMI CAYNNNNRTG 3 cut(s) 794, 1754, 2714
SmlI CTYRAG 2 cut(s) 1926, 2572
SmoI CTYRAG 2 cut(s) 1926, 2572
SseBI AGGCCT 2 cut(s) 1669, 3592
SspI AATATT 1 cut(s) 3265
SspMI CTAG 9 cut(s) 56, 296, 300, 1091, 1592, 1922, 3014, 3185, 3515
StuI AGGCCT 2 cut(s) 1669, 3592
StyD4I CCNGG 3 cut(s) 172, 1984, 2671
StyI CCWWGG 4 cut(s) 1129, 1737, 3052, 3660
TaiI ACGT 5 cut(s) 444, 1225, 1448, 1945, 2310
TatI WGTACW 2 cut(s) 590, 2456
TauI GCSGC 2 cut(s) 99, 2609
TfiI GAWTC 9 cut(s) 5, 383, 923, 1049, 1298, 2249, 2846, 2972, 3221
TscAI CASTG 6 cut(s) 543, 593, 825, 1035, 2459, 2745
TseFI GTSAC 8 cut(s) 72, 400, 447, 796, 1938, 2266, 2313, 2716
Tsp45I GTSAC 8 cut(s) 72, 400, 447, 796, 1938, 2266, 2313, 2716
TspGWI ACGGA 2 cut(s) 199, 2065
TspRI CASTG 6 cut(s) 543, 593, 825, 1035, 2459, 2745
Van91I CCANNNNNTGG 2 cut(s) 348, 2214
Vha464I CTTAAG 1 cut(s) 2572
XapI RAATTY 9 cut(s) 1070, 1114, 1576, 1633, 2993, 3037, 3165, 3499, 3556
XceI RCATGY 6 cut(s) 324, 367, 1846, 2233, 3769, 3804
XcmI CCANNNNNNNNNTGG 2 cut(s) 1435, 3358
XmnI GAANNNNTTC 2 cut(s) 1158, 3081
XspI CTAG 9 cut(s) 56, 296, 300, 1091, 1592, 1922, 3014, 3185, 3515
Zsp2I ATGCAT 6 cut(s) 241, 1603, 1688, 2107, 3526, 3611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.