Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005660.1

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

115459 .. 119496

Gene Structure 4038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005660.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

atgacagcatcttccaacaaaacctcatcagcctcctctcctccttttccaacacttcccaaaaccaagccaactatggctttcacaactcttctctcggacaaggatccaacaaagttaatgccattgcattgtgcagaggagacctcggactcgaagattgtcgtagctgtctcaactactccactcagagtctcatgcgaaactgttcatataaaacggaagcaatcttatgggcagagccttgcatggctgatgctgaaccccttgttggaaattttaagtgacaaagctgcttcgggggattctcgtcaaaaatatgcagcaggacatgcaactgttccgggaaacgaaacgatatatgcacatgcgcagtgcactccggacatagacaaagtcaattgcagtaattgccttaagaattgcatctctgctcttccagcatgttgcagtggaaagtcaggagcaagactccagaatccagatccagctactccaacgactccagaaactccatctccacctgagcgaggaaagaatatcatcatcataattgttgttgtgattgcttttgtcactatgcttctcggtggcatttgcattttcttaagagtcaagaagccaagggtaaaacttgatgtacctttttcagatgatacttcggaagaaattagtctcgtggaatcgttacaatatgactttgaagatattagatcagcaacagatgacttttctgatgaaaataagcttggacaaggtggatttggagcagtttacaagggtaggctatataacggacgatatatagctgtgaaaagactctccaagagttctgaacaggactttggtatggcaagattgtttgtgatggatcaaactcaaggagatacaaagaccatcgttgggacctatggatacatggcacctgtatatgcaagtcatggacgcttttctgtcaagtcagatgtcttcagttttggtgtgttagttcttgaaataattactggcaagaagagtggtagttttcagaatggtgaaaatgaagacgatttgttaagctatctaaaacagctgcaaagctccgatcattgctctaacgaaaatgaatggcggccacacaagaagatgaagaacctcaagcttctgatcattgagcccggcggccaggagctcaaaattgaatccgagtcgctctcctcgatccatactgcaatatttcttagcctcgatgtctgcaagccgtctgaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

416

Amino Acids

45.46

Weight (kDa)

6.72

Isoelectric Point (pI)

48.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	372
AccB1I	GGYRCC	1 cut(s)	922
AccIII	TCCGGA	1 cut(s)	382
AciI	CCGC	2 cut(s)	1111, 1161
AclWI	GGATC	5 cut(s)	101, 114, 479, 879, 1195
AcoI	YGGCCR	2 cut(s)	1112, 1162
AcsI	RAATTY	1 cut(s)	276
AcuI	CTGAAG	1 cut(s)	955
AfaI	GTAC	1 cut(s)	642
AfiI	CCNNNNNNNGG	3 cut(s)	271, 530, 903
AflII	CTTAAG	2 cut(s)	416, 607
AgsI	TTSAA	3 cut(s)	704, 995, 1181
AjnI	CCWGG	1 cut(s)	1164
AjuI	GAANNNNNNNTTGG	6 cut(s)	254, 286, 732, 764, 828, 860
Alw21I	GWGCWC	2 cut(s)	380, 1173
Alw26I	GTCTC	4 cut(s)	137, 178, 199, 680
Alw44I	GTGCAC	1 cut(s)	376
AlwI	GGATC	5 cut(s)	101, 114, 479, 879, 1195
Aor13HI	TCCGGA	1 cut(s)	382
AoxI	GGCC	2 cut(s)	1112, 1162
ApaLI	GTGCAC	1 cut(s)	376
ApeKI	GCWGC	3 cut(s)	293, 323, 1072
ApoI	RAATTY	1 cut(s)	276
Asp700I	GAANNNNTTC	1 cut(s)	207
AspLEI	GCGC	1 cut(s)	373
AspS9I	GGNCC	1 cut(s)	906
AsuC2I	CCSGG	2 cut(s)	345, 1158
AsuHPI	GGTGA	1 cut(s)	1046
AvaII	GGWCC	1 cut(s)	906
BaeGI	GKGCMC	1 cut(s)	380
BamHI	GGATCC	1 cut(s)	106
BanI	GGYRCC	1 cut(s)	922
BanII	GRGCYC	2 cut(s)	1158, 1173
BauI	CACGAG	1 cut(s)	677
BbsI	GAAGAC	2 cut(s)	961, 1050
Bbv12I	GWGCWC	2 cut(s)	380, 1173
BbvI	GCAGC	3 cut(s)	280, 335, 1059
BccI	CCATC	3 cut(s)	523, 862, 905
BceAI	ACGGC	1 cut(s)	1225
BciT130I	CCWGG	1 cut(s)	1166
BciVI	GTATCC	1 cut(s)	908
BclI	TGATCA	1 cut(s)	1146
BcnI	CCSGG	2 cut(s)	345, 1158
BcoDI	GTCTC	4 cut(s)	137, 178, 199, 680
BfrI	CTTAAG	2 cut(s)	416, 607
BfuI	GTATCC	1 cut(s)	908
BisI	GCNGC	5 cut(s)	294, 324, 1073, 1112, 1162
BlsI	GCNGC	5 cut(s)	295, 325, 1074, 1113, 1163
Bme1390I	CCNGG	3 cut(s)	345, 1158, 1166
Bme18I	GGWCC	1 cut(s)	906
BmgT120I	GGNCC	1 cut(s)	906
BmiI	GGNNCC	3 cut(s)	108, 907, 924
BmrFI	CCNGG	3 cut(s)	345, 1158, 1166
BmsI	GCATC	3 cut(s)	17, 246, 435
BpiI	GAAGAC	2 cut(s)	961, 1050
BplI	GAGNNNNNCTC	6 cut(s)	131, 163, 456, 488, 1178, 1210
BpmI	CTGGAG	2 cut(s)	458, 489
Bpu10I	CCTNAGC	1 cut(s)	525
BpuEI	CTTGAG	2 cut(s)	864, 1121
BpuMI	CCSGG	2 cut(s)	345, 1158
BsaI	GGTCTC	1 cut(s)	137
BsaJI	CCNNGG	2 cut(s)	147, 623
BsaWI	WCCGGW	1 cut(s)	382
BsaXI	ACNNNNNCTCC	2 cut(s)	502, 532
Bsc4I	CCNNNNNNNGG	3 cut(s)	271, 530, 903
Bse1I	ACTGG	1 cut(s)	1009
Bse3DI	GCAATG	2 cut(s)	125, 1087
BseAI	TCCGGA	1 cut(s)	382
BseBI	CCWGG	1 cut(s)	1166
BseDI	CCNNGG	2 cut(s)	147, 623
BseLI	CCNNNNNNNGG	3 cut(s)	271, 530, 903
BseMI	GCAATG	2 cut(s)	125, 1087
BseMII	CTCAG	2 cut(s)	202, 516
BseNI	ACTGG	1 cut(s)	1009
BseRI	GAGGAG	4 cut(s)	25, 30, 155, 1186
BseSI	GKGCMC	1 cut(s)	380
BseXI	GCAGC	3 cut(s)	280, 335, 1059
BsgI	GTGCAG	1 cut(s)	156
BshFI	GGCC	2 cut(s)	1114, 1164
BshNI	GGYRCC	1 cut(s)	922
BsiHKAI	GWGCWC	2 cut(s)	380, 1173
BsiSI	CCGG	3 cut(s)	344, 383, 1158
BslFI	GGGAC	1 cut(s)	919
BslI	CCNNNNNNNGG	3 cut(s)	271, 530, 903
BsmAI	GTCTC	4 cut(s)	137, 178, 199, 680
BsmFI	GGGAC	1 cut(s)	919
BsnI	GGCC	2 cut(s)	1114, 1164
Bso31I	GGTCTC	1 cut(s)	137
Bsp1286I	GDGCHC	3 cut(s)	380, 1158, 1173
Bsp13I	TCCGGA	1 cut(s)	382
Bsp143I	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
BspACI	CCGC	2 cut(s)	1111, 1161
BspANI	GGCC	2 cut(s)	1114, 1164
BspCNI	CTCAG	2 cut(s)	201, 517
BspEI	TCCGGA	1 cut(s)	382
BspLI	GGNNCC	3 cut(s)	108, 907, 924
BspPI	GGATC	5 cut(s)	101, 114, 479, 879, 1195
BspQI	GCTCTTC	1 cut(s)	441
BspT107I	GGYRCC	1 cut(s)	922
BspTI	CTTAAG	2 cut(s)	416, 607
BspTNI	GGTCTC	1 cut(s)	137
BsrDI	GCAATG	2 cut(s)	125, 1087
BsrI	ACTGG	1 cut(s)	1009
BssECI	CCNNGG	2 cut(s)	147, 623
BssMI	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
BssSI	CACGAG	1 cut(s)	677
BssT1I	CCWWGG	1 cut(s)	623
Bst2BI	CACGAG	1 cut(s)	677
Bst2UI	CCWGG	1 cut(s)	1166
Bst4CI	ACNGT	2 cut(s)	208, 340
Bst6I	CTCTTC	3 cut(s)	96, 441, 1007
BstAFI	CTTAAG	2 cut(s)	416, 607
BstAPI	GCANNNNNTGC	2 cut(s)	332, 411
BstC8I	GCNNGC	1 cut(s)	1238
BstDEI	CTNAG	3 cut(s)	188, 525, 1220
BstENI	CCTNNNNNAGG	1 cut(s)	528
BstHHI	GCGC	1 cut(s)	373
BstKTI	GATC	7 cut(s)	109, 487, 716, 874, 1087, 1149, 1203
BstMAI	GTCTC	4 cut(s)	137, 178, 199, 680
BstMBI	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
BstMWI	GCNNNNNNNGC	3 cut(s)	332, 411, 440
BstNI	CCWGG	1 cut(s)	1166
BstNSI	RCATGY	3 cut(s)	335, 371, 447
BstSCI	CCNGG	3 cut(s)	343, 1156, 1164
BstSLI	GKGCMC	1 cut(s)	380
BstV1I	GCAGC	3 cut(s)	280, 335, 1059
BstV2I	GAAGAC	2 cut(s)	961, 1050
BstX2I	RGATCY	2 cut(s)	106, 484
BstYI	RGATCY	2 cut(s)	106, 484
BsuI	GTATCC	1 cut(s)	908
BsuRI	GGCC	2 cut(s)	1114, 1164
BtsI	GCAGTG	2 cut(s)	380, 457
BtsIMutI	CAGTG	2 cut(s)	380, 457
Cac8I	GCNNGC	1 cut(s)	1238
CfoI	GCGC	1 cut(s)	373
Cfr13I	GGNCC	1 cut(s)	906
CseI	GACGC	1 cut(s)	954
Csp6I	GTAC	1 cut(s)	641
CspCI	CAANNNNNGTGG	2 cut(s)	997, 1032
CviAII	CATG	7 cut(s)	198, 249, 332, 368, 444, 919, 941
CviQI	GTAC	1 cut(s)	641
DdeI	CTNAG	3 cut(s)	188, 525, 1220
DpnI	GATC	7 cut(s)	108, 486, 715, 873, 1086, 1148, 1202
DpnII	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
EaeI	YGGCCR	2 cut(s)	1112, 1162
Eam1104I	CTCTTC	3 cut(s)	96, 441, 1007
EarI	CTCTTC	3 cut(s)	96, 441, 1007
Ecl136II	GAGCTC	1 cut(s)	1171
Eco130I	CCWWGG	1 cut(s)	623
Eco24I	GRGCYC	2 cut(s)	1158, 1173
Eco31I	GGTCTC	1 cut(s)	137
Eco47I	GGWCC	1 cut(s)	906
Eco53kI	GAGCTC	1 cut(s)	1171
Eco57I	CTGAAG	1 cut(s)	955
EcoICRI	GAGCTC	1 cut(s)	1171
EcoNI	CCTNNNNNAGG	1 cut(s)	528
EcoO109I	RGGNCCY	1 cut(s)	906
EcoRII	CCWGG	1 cut(s)	1164
EcoT14I	CCWWGG	1 cut(s)	623
EcoT38I	GRGCYC	2 cut(s)	1158, 1173
ErhI	CCWWGG	1 cut(s)	623
FaeI	CATG	7 cut(s)	201, 252, 335, 371, 447, 922, 944
FaqI	GGGAC	1 cut(s)	919
FatI	CATG	7 cut(s)	197, 248, 331, 367, 443, 918, 940
FbaI	TGATCA	1 cut(s)	1146
Fnu4HI	GCNGC	5 cut(s)	294, 324, 1073, 1112, 1162
FriOI	GRGCYC	2 cut(s)	1158, 1173
Fsp4HI	GCNGC	5 cut(s)	294, 324, 1073, 1112, 1162
FspI	TGCGCA	1 cut(s)	372
GlaI	GCGC	1 cut(s)	372
GluI	GCNGC	5 cut(s)	294, 324, 1073, 1112, 1162
GsuI	CTGGAG	2 cut(s)	458, 489
HaeIII	GGCC	2 cut(s)	1114, 1164
HapII	CCGG	3 cut(s)	344, 383, 1158
HgaI	GACGC	1 cut(s)	954
HhaI	GCGC	1 cut(s)	373
Hin1II	CATG	7 cut(s)	201, 252, 335, 371, 447, 922, 944
Hin6I	GCGC	1 cut(s)	371
HinP1I	GCGC	1 cut(s)	371
HindIII	AAGCTT	2 cut(s)	746, 1139
HpaII	CCGG	3 cut(s)	344, 383, 1158
HphI	GGTGA	1 cut(s)	1046
Hpy166II	GTNNAC	2 cut(s)	378, 775
Hpy188III	TCNNGA	7 cut(s)	383, 462, 475, 482, 506, 616, 992
Hpy8I	GTNNAC	2 cut(s)	378, 775
HpyCH4III	ACNGT	2 cut(s)	208, 340
HpyF10VI	GCNNNNNNNGC	3 cut(s)	332, 411, 440
HpyF3I	CTNAG	3 cut(s)	188, 525, 1220
Hsp92II	CATG	7 cut(s)	201, 252, 335, 371, 447, 922, 944
HspAI	GCGC	1 cut(s)	371
Kpn2I	TCCGGA	1 cut(s)	382
Ksp22I	TGATCA	1 cut(s)	1146
Kzo9I	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
LguI	GCTCTTC	1 cut(s)	441
LmnI	GCTCC	4 cut(s)	464, 767, 1085, 1168
Lsp1109I	GCAGC	3 cut(s)	280, 335, 1059
LweI	GCATC	3 cut(s)	17, 246, 435
MaeIII	GTNAC	3 cut(s)	284, 574, 687
MalI	GATC	7 cut(s)	108, 486, 715, 873, 1086, 1148, 1202
MboI	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
MfeI	CAATTG	1 cut(s)	400
MflI	RGATCY	2 cut(s)	106, 484
MhlI	GDGCHC	3 cut(s)	380, 1158, 1173
MluCI	AATT	8 cut(s)	276, 400, 409, 421, 552, 669, 999, 1176
MlyI	GAGTC	7 cut(s)	146, 201, 465, 496, 621, 813, 1196
MmeI	TCCRAC	5 cut(s)	39, 74, 134, 252, 521
MroI	TCCGGA	1 cut(s)	382
MroXI	GAANNNNTTC	1 cut(s)	207
MseI	TTAA	5 cut(s)	119, 281, 417, 608, 1055
MspA1I	CMGCKG	1 cut(s)	1072
MspCI	CTTAAG	2 cut(s)	416, 607
MspI	CCGG	3 cut(s)	344, 383, 1158
MspR9I	CCNGG	3 cut(s)	345, 1158, 1166
MunI	CAATTG	1 cut(s)	400
MvaI	CCWGG	1 cut(s)	1166
MwoI	GCNNNNNNNGC	3 cut(s)	332, 411, 440
NciI	CCSGG	2 cut(s)	345, 1158
NdeII	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
NlaIII	CATG	7 cut(s)	201, 252, 335, 371, 447, 922, 944
NlaIV	GGNNCC	3 cut(s)	108, 907, 924
NmuCI	GTSAC	2 cut(s)	284, 574
NsbI	TGCGCA	1 cut(s)	372
NspI	RCATGY	3 cut(s)	335, 371, 447
PciSI	GCTCTTC	1 cut(s)	441
PcsI	WCGNNNNNNNCGW	1 cut(s)	1196
PdmI	GAANNNNTTC	1 cut(s)	207
PfeI	GAWTC	4 cut(s)	305, 478, 683, 1181
PflFI	GACNNNGTC	1 cut(s)	395
PfoI	TCCNGGA	1 cut(s)	343
PkrI	GCNGC	5 cut(s)	295, 325, 1074, 1113, 1163
PleI	GAGTC	7 cut(s)	146, 200, 465, 496, 620, 813, 1195
PpsI	GAGTC	7 cut(s)	146, 200, 465, 496, 620, 813, 1195
PpuMI	RGGWCCY	1 cut(s)	906
Psp124BI	GAGCTC	1 cut(s)	1173
Psp5II	RGGWCCY	1 cut(s)	906
Psp6I	CCWGG	1 cut(s)	1164
PspGI	CCWGG	1 cut(s)	1164
PspN4I	GGNNCC	3 cut(s)	108, 907, 924
PspPI	GGNCC	1 cut(s)	906
PspPPI	RGGWCCY	1 cut(s)	906
PsuI	RGATCY	2 cut(s)	106, 484
PsyI	GACNNNGTC	1 cut(s)	395
PvuII	CAGCTG	1 cut(s)	1072
RsaI	GTAC	1 cut(s)	642
RsaNI	GTAC	1 cut(s)	641
SacI	GAGCTC	1 cut(s)	1173
SapI	GCTCTTC	1 cut(s)	441
SaqAI	TTAA	5 cut(s)	119, 281, 417, 608, 1055
SatI	GCNGC	5 cut(s)	294, 324, 1073, 1112, 1162
Sau3AI	GATC	7 cut(s)	106, 484, 713, 871, 1084, 1146, 1200
Sau96I	GGNCC	1 cut(s)	906
SchI	GAGTC	7 cut(s)	146, 201, 465, 496, 621, 813, 1196
ScrFI	CCNGG	3 cut(s)	345, 1158, 1166
SduI	GDGCHC	3 cut(s)	380, 1158, 1173
SfaNI	GCATC	3 cut(s)	17, 246, 435
SinI	GGWCC	1 cut(s)	906
SmlI	CTYRAG	4 cut(s)	416, 607, 879, 1136
SmoI	CTYRAG	4 cut(s)	416, 607, 879, 1136
Sse9I	AATT	8 cut(s)	276, 400, 409, 421, 552, 669, 999, 1176
SsiI	CCGC	2 cut(s)	1111, 1161
SspI	AATATT	1 cut(s)	1215
SstI	GAGCTC	1 cut(s)	1173
StyD4I	CCNGG	3 cut(s)	343, 1156, 1164
StyI	CCWWGG	1 cut(s)	623
TaaI	ACNGT	2 cut(s)	208, 340
TaqI	TCGA	3 cut(s)	155, 1199, 1227
TasI	AATT	8 cut(s)	276, 400, 409, 421, 552, 669, 999, 1176
TauI	GCSGC	2 cut(s)	1114, 1164
TfiI	GAWTC	4 cut(s)	305, 478, 683, 1181
Tru1I	TTAA	5 cut(s)	119, 281, 417, 608, 1055
Tru9I	TTAA	5 cut(s)	119, 281, 417, 608, 1055
TscAI	CASTG	2 cut(s)	380, 457
TseFI	GTSAC	2 cut(s)	284, 574
TseI	GCWGC	3 cut(s)	293, 323, 1072
Tsp45I	GTSAC	2 cut(s)	284, 574
TspDTI	ATGAA	5 cut(s)	200, 753, 1056, 1119, 1142
TspGWI	ACGGA	2 cut(s)	235, 810
TspRI	CASTG	2 cut(s)	380, 457
Tth111I	GACNNNGTC	1 cut(s)	395
Vha464I	CTTAAG	2 cut(s)	416, 607
VneI	GTGCAC	1 cut(s)	376
VpaK11BI	GGWCC	1 cut(s)	906
XagI	CCTNNNNNAGG	1 cut(s)	528
XapI	RAATTY	1 cut(s)	276
XceI	RCATGY	3 cut(s)	335, 371, 447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	73
XmnI	GAANNNNTTC	1 cut(s)	207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.