Rorug05G0139500

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
12712576 .. 12713106
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0139500.1

Sequence Viewer

Length: 492 bp
ATGGAAAACAAATCATTTTCAGTTGGGTTACTAAGAACCTTCCTCCTCCTTTCCACACTGTTTTGGCCATCTTTCTCACGCAGCTCACCCCATAAAACCTCCCCTACTCCCTCTTCTAACACCATTCAGCAGTACTTGATCCCTCACAACACTGAAAGATCAAAGCTCGGCCTCCCTCCTCTCAAATGGAGCAAGAAACTAGAGAGCTACGCTTCCTGGTGGGCCCGCCAAAGGCGAGAAGACTGCTCGTTGATTCATTCGAACAGCGAATTCGGGGAGAACCTCTTCTGGGGGAGTGGACATGACTGGAAGCCGAGTGATGCAGTTAAAGCATGGGCAACAGAGAGTTGCTACTACAACCACAAGACTAACTCTTGTGATCAGAAAAAGGATTGCTTGCATTATACTCAAATGGTTTGGAAGCAGAGCTCGAAGATTGGTTGTGCTAAAGTTATATGTAAGGGTAATGTTATAGGCCAAAAGCCATTTTGA

Protein Analysis

163

Amino Acids

18.76

Weight (kDa)

9.44

Isoelectric Point (pI)

57.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAP PF00188 49 - 156 7.8e-19 Cysteine-rich secretory protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 226
AclWI GGATC 1 cut(s) 133
AcoI YGGCCR 1 cut(s) 65
AcsI RAATTY 1 cut(s) 269
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 2 cut(s) 231, 289
AjnI CCWGG 1 cut(s) 215
AluBI AGCT 4 cut(s) 84, 166, 207, 429
AluI AGCT 4 cut(s) 84, 166, 207, 429
Alw21I GWGCWC 1 cut(s) 431
AlwI GGATC 1 cut(s) 133
AoxI GGCC 4 cut(s) 65, 169, 222, 475
ApaI GGGCCC 1 cut(s) 226
ApeKI GCWGC 1 cut(s) 81
ApoI RAATTY 1 cut(s) 269
Asp700I GAANNNNTTC 1 cut(s) 284
AspS9I GGNCC 2 cut(s) 222, 223
AsuHPI GGTGA 1 cut(s) 78
AsuII TTCGAA 1 cut(s) 260
BaeGI GKGCMC 1 cut(s) 226
BalI TGGCCA 1 cut(s) 67
BanII GRGCYC 2 cut(s) 226, 431
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 431
BbvI GCAGC 1 cut(s) 93
BccI CCATC 1 cut(s) 76
BcgI CGANNNNNNTGC 2 cut(s) 225, 259
BciT130I CCWGG 1 cut(s) 217
BclI TGATCA 1 cut(s) 379
BfaI CTAG 1 cut(s) 200
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
BmcAI AGTACT 1 cut(s) 134
Bme1390I CCNGG 1 cut(s) 217
BmgT120I GGNCC 2 cut(s) 222, 223
BmiI GGNNCC 1 cut(s) 224
BmrFI CCNGG 1 cut(s) 217
BmsI GCATC 1 cut(s) 310
BpiI GAAGAC 1 cut(s) 246
Bpu14I TTCGAA 1 cut(s) 260
Bsc4I CCNNNNNNNGG 2 cut(s) 231, 289
Bse1I ACTGG 1 cut(s) 311
BseBI CCWGG 1 cut(s) 217
BseLI CCNNNNNNNGG 2 cut(s) 231, 289
BseNI ACTGG 1 cut(s) 311
BseRI GAGGAG 2 cut(s) 35, 168
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 1 cut(s) 93
BshFI GGCC 4 cut(s) 67, 171, 224, 477
BsiHKAI GWGCWC 1 cut(s) 431
BslI CCNNNNNNNGG 2 cut(s) 231, 289
BsnI GGCC 4 cut(s) 67, 171, 224, 477
Bsp119I TTCGAA 1 cut(s) 260
Bsp120I GGGCCC 1 cut(s) 222
Bsp1286I GDGCHC 2 cut(s) 226, 431
Bsp143I GATC 3 cut(s) 138, 158, 379
BspACI CCGC 1 cut(s) 226
BspANI GGCC 4 cut(s) 67, 171, 224, 477
BspLI GGNNCC 1 cut(s) 224
BspPI GGATC 1 cut(s) 133
BspT104I TTCGAA 1 cut(s) 260
BsrI ACTGG 1 cut(s) 311
BssMI GATC 3 cut(s) 138, 158, 379
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 1 cut(s) 60
Bst6I CTCTTC 2 cut(s) 118, 290
BstBI TTCGAA 1 cut(s) 260
BstC8I GCNNGC 2 cut(s) 226, 398
BstDEI CTNAG 1 cut(s) 32
BstKTI GATC 3 cut(s) 141, 161, 382
BstMBI GATC 3 cut(s) 138, 158, 379
BstMWI GCNNNNNNNGC 1 cut(s) 329
BstNI CCWGG 1 cut(s) 217
BstSCI CCNGG 1 cut(s) 215
BstSLI GKGCMC 1 cut(s) 226
BstV1I GCAGC 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 246
BsuRI GGCC 4 cut(s) 67, 171, 224, 477
BtsIMutI CAGTG 2 cut(s) 56, 150
Cac8I GCNNGC 2 cut(s) 226, 398
Cfr13I GGNCC 2 cut(s) 222, 223
Csp6I GTAC 1 cut(s) 133
CviAII CATG 2 cut(s) 302, 333
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 1 cut(s) 32
DpnI GATC 3 cut(s) 140, 160, 381
DpnII GATC 3 cut(s) 138, 158, 379
EaeI YGGCCR 1 cut(s) 65
Eam1104I CTCTTC 2 cut(s) 118, 290
EarI CTCTTC 2 cut(s) 118, 290
Ecl136II GAGCTC 1 cut(s) 429
Eco24I GRGCYC 2 cut(s) 226, 431
Eco53kI GAGCTC 1 cut(s) 429
EcoICRI GAGCTC 1 cut(s) 429
EcoRI GAATTC 1 cut(s) 269
EcoRII CCWGG 1 cut(s) 215
EcoT38I GRGCYC 2 cut(s) 226, 431
FaeI CATG 2 cut(s) 305, 336
FaiI YATR 7 cut(s) 93, 303, 334, 405, 455, 457, 473
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FatI CATG 2 cut(s) 301, 332
FauI CCCGC 1 cut(s) 233
FbaI TGATCA 1 cut(s) 379
Fnu4HI GCNGC 1 cut(s) 82
FriOI GRGCYC 2 cut(s) 226, 431
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 1 cut(s) 200
GluI GCNGC 1 cut(s) 82
HaeIII GGCC 4 cut(s) 67, 171, 224, 477
Hin1II CATG 2 cut(s) 305, 336
HinfI GANTC 1 cut(s) 253
HphI GGTGA 1 cut(s) 78
Hpy166II GTNNAC 1 cut(s) 299
Hpy188I TCNGA 1 cut(s) 384
Hpy8I GTNNAC 1 cut(s) 299
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 1 cut(s) 60
HpyCH4V TGCA 2 cut(s) 323, 400
HpyF10VI GCNNNNNNNGC 1 cut(s) 329
HpyF3I CTNAG 1 cut(s) 32
Hsp92II CATG 2 cut(s) 305, 336
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 3 cut(s) 138, 158, 379
LmnI GCTCC 1 cut(s) 189
LpnPI CCDG 4 cut(s) 202, 229, 274, 292
Lsp1109I GCAGC 1 cut(s) 93
LweI GCATC 1 cut(s) 310
MaeI CTAG 1 cut(s) 200
MaeIII GTNAC 1 cut(s) 27
MalI GATC 3 cut(s) 140, 160, 381
MboI GATC 3 cut(s) 138, 158, 379
MboII GAAGA 4 cut(s) 105, 251, 277, 445
MhlI GDGCHC 2 cut(s) 226, 431
MlsI TGGCCA 1 cut(s) 67
MluCI AATT 1 cut(s) 269
MluNI TGGCCA 1 cut(s) 67
MnlI CCTC 9 cut(s) 53, 56, 109, 121, 153, 182, 186, 189, 293
Mox20I TGGCCA 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 284
MscI TGGCCA 1 cut(s) 67
MseI TTAA 1 cut(s) 327
Msp20I TGGCCA 1 cut(s) 67
MspR9I CCNGG 1 cut(s) 217
MvaI CCWGG 1 cut(s) 217
MwoI GCNNNNNNNGC 1 cut(s) 329
NdeII GATC 3 cut(s) 138, 158, 379
NlaIII CATG 2 cut(s) 305, 336
NlaIV GGNNCC 1 cut(s) 224
NmeAIII GCCGAG 2 cut(s) 147, 339
NspV TTCGAA 1 cut(s) 260
PdmI GAANNNNTTC 1 cut(s) 284
PfeI GAWTC 1 cut(s) 253
PkrI GCNGC 1 cut(s) 83
Psp124BI GAGCTC 1 cut(s) 431
Psp6I CCWGG 1 cut(s) 215
PspGI CCWGG 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 224
PspOMI GGGCCC 1 cut(s) 222
PspPI GGNCC 2 cut(s) 222, 223
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SacI GAGCTC 1 cut(s) 431
SaqAI TTAA 1 cut(s) 327
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 3 cut(s) 138, 158, 379
Sau96I GGNCC 2 cut(s) 222, 223
ScaI AGTACT 1 cut(s) 134
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 2 cut(s) 226, 431
SetI ASST 7 cut(s) 41, 86, 101, 168, 209, 285, 431
SfaNI GCATC 1 cut(s) 310
SfuI TTCGAA 1 cut(s) 260
Sse9I AATT 1 cut(s) 269
SsiI CCGC 1 cut(s) 226
SspMI CTAG 1 cut(s) 200
SstI GAGCTC 1 cut(s) 431
StyD4I CCNGG 1 cut(s) 215
TaaI ACNGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 260, 431
TasI AATT 1 cut(s) 269
TatI WGTACW 1 cut(s) 132
TfiI GAWTC 1 cut(s) 253
Tru1I TTAA 1 cut(s) 327
Tru9I TTAA 1 cut(s) 327
TscAI CASTG 2 cut(s) 63, 157
TseI GCWGC 1 cut(s) 81
TspDTI ATGAA 1 cut(s) 245
TspRI CASTG 2 cut(s) 63, 157
XapI RAATTY 1 cut(s) 269
XmnI GAANNNNTTC 1 cut(s) 284
XspI CTAG 1 cut(s) 200
ZrmI AGTACT 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.