Cysteine-rich receptor-like protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Stress-antifung | PF01657 | 34 - 120 | 6.5e-23 | Salt stress response/antifungal |
| Stress-antifung | PF01657 | 145 - 237 | 7.3e-14 | Salt stress response/antifungal |
| Pkinase | PF00069 | 310 - 559 | 1e-39 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 311 - 518 | 1.4e-41 | Protein tyrosine and serine/threonine kinase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1511 |
| AccII | CGCG | 1 cut(s) | 234 |
| AciI | CCGC | 7 cut(s) | 171, 232, 234, 498, 1141, 1192, 1775 |
| AclWI | GGATC | 4 cut(s) | 1124, 1750, 1765, 1770 |
| AcoI | YGGCCR | 1 cut(s) | 1014 |
| AcsI | RAATTY | 2 cut(s) | 989, 1102 |
| AcuI | CTGAAG | 2 cut(s) | 90, 1650 |
| AcyI | GRCGYC | 1 cut(s) | 375 |
| AdeI | CACNNNGTG | 1 cut(s) | 980 |
| AfaI | GTAC | 4 cut(s) | 67, 332, 542, 1713 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 371, 501, 770, 776 |
| AgeI | ACCGGT | 1 cut(s) | 1346 |
| AgsI | TTSAA | 9 cut(s) | 20, 451, 635, 724, 911, 1025, 1107, 1551, 1587 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1082 |
| AjnI | CCWGG | 1 cut(s) | 781 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1648, 1680 |
| Alw21I | GWGCWC | 1 cut(s) | 584 |
| Alw26I | GTCTC | 2 cut(s) | 404, 1115 |
| Alw44I | GTGCAC | 1 cut(s) | 580 |
| AlwI | GGATC | 4 cut(s) | 1124, 1750, 1765, 1770 |
| AoxI | GGCC | 4 cut(s) | 193, 465, 1014, 1339 |
| ApaLI | GTGCAC | 1 cut(s) | 580 |
| ApeKI | GCWGC | 6 cut(s) | 168, 411, 491, 609, 734, 737 |
| ApoI | RAATTY | 2 cut(s) | 989, 1102 |
| AsiGI | ACCGGT | 1 cut(s) | 1346 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1077 |
| AspS9I | GGNCC | 3 cut(s) | 779, 813, 1504 |
| AsuC2I | CCSGG | 2 cut(s) | 771, 1756 |
| AsuHPI | GGTGA | 6 cut(s) | 92, 283, 518, 635, 992, 1658 |
| AsuII | TTCGAA | 1 cut(s) | 1228 |
| AvaII | GGWCC | 3 cut(s) | 779, 813, 1504 |
| BaeGI | GKGCMC | 1 cut(s) | 584 |
| BalI | TGGCCA | 1 cut(s) | 1016 |
| BbsI | GAAGAC | 3 cut(s) | 484, 899, 1217 |
| Bbv12I | GWGCWC | 1 cut(s) | 584 |
| BbvI | GCAGC | 6 cut(s) | 180, 423, 503, 621, 724, 746 |
| BccI | CCATC | 4 cut(s) | 321, 595, 875, 1723 |
| BceAI | ACGGC | 2 cut(s) | 181, 480 |
| BciT130I | CCWGG | 1 cut(s) | 783 |
| BciVI | GTATCC | 1 cut(s) | 1153 |
| BclI | TGATCA | 1 cut(s) | 1327 |
| BcnI | CCSGG | 2 cut(s) | 771, 1756 |
| BcoDI | GTCTC | 2 cut(s) | 404, 1115 |
| BfaI | CTAG | 5 cut(s) | 396, 776, 1037, 1254, 1686 |
| BfmI | CTRYAG | 2 cut(s) | 607, 1426 |
| BfuI | GTATCC | 1 cut(s) | 1153 |
| BglII | AGATCT | 1 cut(s) | 84 |
| BisI | GCNGC | 8 cut(s) | 169, 232, 235, 412, 492, 610, 735, 738 |
| BlsI | GCNGC | 8 cut(s) | 170, 233, 236, 413, 493, 611, 736, 739 |
| BmcAI | AGTACT | 1 cut(s) | 67 |
| Bme1390I | CCNGG | 3 cut(s) | 771, 783, 1756 |
| Bme18I | GGWCC | 3 cut(s) | 779, 813, 1504 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1082 |
| BmgT120I | GGNCC | 3 cut(s) | 779, 813, 1504 |
| BmiI | GGNNCC | 2 cut(s) | 932, 1380 |
| BmrFI | CCNGG | 3 cut(s) | 771, 783, 1756 |
| BmrI | ACTGGG | 1 cut(s) | 1703 |
| BmsI | GCATC | 4 cut(s) | 1128, 1261, 1595, 1617 |
| BmuI | ACTGGG | 1 cut(s) | 1703 |
| BpiI | GAAGAC | 3 cut(s) | 484, 899, 1217 |
| BpmI | CTGGAG | 2 cut(s) | 172, 1365 |
| Bpu14I | TTCGAA | 1 cut(s) | 1228 |
| BpuEI | CTTGAG | 3 cut(s) | 141, 500, 718 |
| BpuMI | CCSGG | 2 cut(s) | 771, 1756 |
| Bsa29I | ATCGAT | 1 cut(s) | 1769 |
| BsaAI | YACGTR | 2 cut(s) | 540, 1390 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1326 |
| BsaHI | GRCGYC | 1 cut(s) | 375 |
| BsaJI | CCNNGG | 5 cut(s) | 76, 232, 416, 1048, 1659 |
| BsaWI | WCCGGW | 1 cut(s) | 1346 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 125, 155, 170, 200 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 371, 501, 770, 776 |
| Bse118I | RCCGGY | 1 cut(s) | 1346 |
| Bse1I | ACTGG | 2 cut(s) | 328, 1709 |
| Bse3DI | GCAATG | 1 cut(s) | 1605 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1326 |
| BseBI | CCWGG | 1 cut(s) | 783 |
| BseCI | ATCGAT | 1 cut(s) | 1769 |
| BseDI | CCNNGG | 5 cut(s) | 76, 232, 416, 1048, 1659 |
| BseGI | GGATG | 5 cut(s) | 256, 332, 1260, 1276, 1608 |
| BseJI | GATNNNNATC | 1 cut(s) | 1326 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 371, 501, 770, 776 |
| BseMI | GCAATG | 1 cut(s) | 1605 |
| BseMII | CTCAG | 4 cut(s) | 569, 648, 700, 1727 |
| BseNI | ACTGG | 2 cut(s) | 328, 1709 |
| BseRI | GAGGAG | 6 cut(s) | 133, 140, 750, 753, 1540, 1692 |
| BseSI | GKGCMC | 1 cut(s) | 584 |
| BseXI | GCAGC | 6 cut(s) | 180, 423, 503, 621, 724, 746 |
| BsgI | GTGCAG | 4 cut(s) | 430, 510, 935, 957 |
| Bsh1236I | CGCG | 1 cut(s) | 234 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1351 |
| BshFI | GGCC | 4 cut(s) | 195, 467, 1016, 1341 |
| BshTI | ACCGGT | 1 cut(s) | 1346 |
| BshVI | ATCGAT | 1 cut(s) | 1769 |
| BsiEI | CGRYCG | 1 cut(s) | 1351 |
| BsiHKAI | GWGCWC | 1 cut(s) | 584 |
| BsiSI | CCGG | 3 cut(s) | 770, 1347, 1755 |
| BsiWI | CGTACG | 1 cut(s) | 540 |
| BslFI | GGGAC | 6 cut(s) | 41, 325, 434, 786, 1082, 1158 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 371, 501, 770, 776 |
| BsmAI | GTCTC | 2 cut(s) | 404, 1115 |
| BsmFI | GGGAC | 6 cut(s) | 41, 325, 434, 786, 1082, 1158 |
| BsnI | GGCC | 4 cut(s) | 195, 467, 1016, 1341 |
| Bsp119I | TTCGAA | 1 cut(s) | 1228 |
| Bsp1286I | GDGCHC | 1 cut(s) | 584 |
| Bsp19I | CCATGG | 2 cut(s) | 416, 1659 |
| BspACI | CCGC | 7 cut(s) | 171, 232, 234, 498, 1141, 1192, 1775 |
| BspANI | GGCC | 4 cut(s) | 195, 467, 1016, 1341 |
| BspCNI | CTCAG | 4 cut(s) | 568, 649, 699, 1728 |
| BspDI | ATCGAT | 1 cut(s) | 1769 |
| BspFNI | CGCG | 1 cut(s) | 234 |
| BspHI | TCATGA | 1 cut(s) | 1210 |
| BspLI | GGNNCC | 2 cut(s) | 932, 1380 |
| BspMAI | CTGCAG | 1 cut(s) | 611 |
| BspPI | GGATC | 4 cut(s) | 1124, 1750, 1765, 1770 |
| BspT104I | TTCGAA | 1 cut(s) | 1228 |
| BsrDI | GCAATG | 1 cut(s) | 1605 |
| BsrFI | RCCGGY | 1 cut(s) | 1346 |
| BsrI | ACTGG | 2 cut(s) | 328, 1709 |
| BssAI | RCCGGY | 1 cut(s) | 1346 |
| BssECI | CCNNGG | 5 cut(s) | 76, 232, 416, 1048, 1659 |
| BssNI | GRCGYC | 1 cut(s) | 375 |
| BssT1I | CCWWGG | 4 cut(s) | 76, 416, 1048, 1659 |
| Bst2UI | CCWGG | 1 cut(s) | 783 |
| Bst4CI | ACNGT | 4 cut(s) | 182, 545, 668, 817 |
| Bst6I | CTCTTC | 3 cut(s) | 722, 855, 947 |
| BstACI | GRCGYC | 1 cut(s) | 375 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 615 |
| BstBAI | YACGTR | 2 cut(s) | 540, 1390 |
| BstBI | TTCGAA | 1 cut(s) | 1228 |
| BstC8I | GCNNGC | 1 cut(s) | 1497 |
| BstDEI | CTNAG | 4 cut(s) | 555, 657, 686, 1736 |
| BstDSI | CCRYGG | 3 cut(s) | 232, 416, 1659 |
| BstF5I | GGATG | 5 cut(s) | 256, 332, 1260, 1276, 1608 |
| BstFNI | CGCG | 1 cut(s) | 234 |
| BstMAI | GTCTC | 2 cut(s) | 404, 1115 |
| BstMCI | CGRYCG | 1 cut(s) | 1351 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 168, 348, 497, 615, 922 |
| BstNI | CCWGG | 1 cut(s) | 783 |
| BstNSI | RCATGY | 2 cut(s) | 346, 1499 |
| BstSCI | CCNGG | 3 cut(s) | 769, 781, 1754 |
| BstSFI | CTRYAG | 2 cut(s) | 607, 1426 |
| BstSLI | GKGCMC | 1 cut(s) | 584 |
| BstSNI | TACGTA | 2 cut(s) | 540, 1390 |
| BstUI | CGCG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 6 cut(s) | 180, 423, 503, 621, 724, 746 |
| BstV2I | GAAGAC | 3 cut(s) | 484, 899, 1217 |
| BstX2I | RGATCY | 2 cut(s) | 84, 1742 |
| BstYI | RGATCY | 2 cut(s) | 84, 1742 |
| Bsu15I | ATCGAT | 1 cut(s) | 1769 |
| BsuI | GTATCC | 1 cut(s) | 1153 |
| BsuRI | GGCC | 4 cut(s) | 195, 467, 1016, 1341 |
| BsuTUI | ATCGAT | 1 cut(s) | 1769 |
| BtgI | CCRYGG | 3 cut(s) | 232, 416, 1659 |
| BtgZI | GCGATG | 1 cut(s) | 252 |
| BtsCI | GGATG | 5 cut(s) | 256, 332, 1260, 1276, 1608 |
| BtsI | GCAGTG | 2 cut(s) | 584, 954 |
| BtsIMutI | CAGTG | 2 cut(s) | 584, 954 |
| Cac8I | GCNNGC | 1 cut(s) | 1497 |
| CciI | TCATGA | 1 cut(s) | 1210 |
| Cfr10I | RCCGGY | 1 cut(s) | 1346 |
| Cfr13I | GGNCC | 3 cut(s) | 779, 813, 1504 |
| Cfr42I | CCGCGG | 1 cut(s) | 235 |
| ClaI | ATCGAT | 1 cut(s) | 1769 |
| CpoI | CGGWCCG | 1 cut(s) | 813 |
| CseI | GACGC | 3 cut(s) | 284, 364, 635 |
| Csp6I | GTAC | 4 cut(s) | 66, 331, 541, 1712 |
| CspAI | ACCGGT | 1 cut(s) | 1346 |
| CspI | CGGWCCG | 1 cut(s) | 813 |
| CviAII | CATG | 7 cut(s) | 343, 379, 417, 1211, 1367, 1496, 1660 |
| CviQI | GTAC | 4 cut(s) | 66, 331, 541, 1712 |
| DdeI | CTNAG | 4 cut(s) | 555, 657, 686, 1736 |
| DraI | TTTAAA | 1 cut(s) | 994 |
| DraIII | CACNNNGTG | 1 cut(s) | 980 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1082 |
| EaeI | YGGCCR | 1 cut(s) | 1014 |
| Eam1104I | CTCTTC | 3 cut(s) | 722, 855, 947 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1082 |
| EarI | CTCTTC | 3 cut(s) | 722, 855, 947 |
| Eco105I | TACGTA | 2 cut(s) | 540, 1390 |
| Eco130I | CCWWGG | 4 cut(s) | 76, 416, 1048, 1659 |
| Eco32I | GATATC | 1 cut(s) | 1423 |
| Eco47I | GGWCC | 3 cut(s) | 779, 813, 1504 |
| Eco57I | CTGAAG | 2 cut(s) | 90, 1650 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1504 |
| EcoRII | CCWGG | 1 cut(s) | 781 |
| EcoRV | GATATC | 1 cut(s) | 1423 |
| EcoT14I | CCWWGG | 4 cut(s) | 76, 416, 1048, 1659 |
| EcoT22I | ATGCAT | 2 cut(s) | 269, 1610 |
| ErhI | CCWWGG | 4 cut(s) | 76, 416, 1048, 1659 |
| FaeI | CATG | 7 cut(s) | 346, 382, 420, 1214, 1370, 1499, 1663 |
| FaqI | GGGAC | 6 cut(s) | 41, 325, 434, 786, 1082, 1158 |
| FatI | CATG | 7 cut(s) | 342, 378, 416, 1210, 1366, 1495, 1659 |
| FauI | CCCGC | 3 cut(s) | 164, 1134, 1185 |
| FbaI | TGATCA | 1 cut(s) | 1327 |
| Fnu4HI | GCNGC | 8 cut(s) | 169, 232, 235, 412, 492, 610, 735, 738 |
| FokI | GGATG | 5 cut(s) | 263, 339, 1247, 1283, 1595 |
| Fsp4HI | GCNGC | 8 cut(s) | 169, 232, 235, 412, 492, 610, 735, 738 |
| FspBI | CTAG | 5 cut(s) | 396, 776, 1037, 1254, 1686 |
| GluI | GCNGC | 8 cut(s) | 169, 232, 235, 412, 492, 610, 735, 738 |
| GsuI | CTGGAG | 2 cut(s) | 172, 1365 |
| HaeIII | GGCC | 4 cut(s) | 195, 467, 1016, 1341 |
| HapII | CCGG | 3 cut(s) | 770, 1347, 1755 |
| HgaI | GACGC | 3 cut(s) | 284, 364, 635 |
| Hin1I | GRCGYC | 1 cut(s) | 375 |
| Hin1II | CATG | 7 cut(s) | 346, 382, 420, 1214, 1370, 1499, 1663 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HindIII | AAGCTT | 2 cut(s) | 923, 1019 |
| HinfI | GANTC | 6 cut(s) | 296, 383, 635, 1217, 1282, 1583 |
| HpaII | CCGG | 3 cut(s) | 770, 1347, 1755 |
| HphI | GGTGA | 6 cut(s) | 92, 283, 518, 635, 992, 1658 |
| Hpy166II | GTNNAC | 4 cut(s) | 130, 214, 582, 1400 |
| Hpy188I | TCNGA | 8 cut(s) | 120, 224, 558, 598, 813, 1420, 1737, 1747 |
| Hpy8I | GTNNAC | 4 cut(s) | 130, 214, 582, 1400 |
| Hpy99I | CGWCG | 1 cut(s) | 278 |
| HpyAV | CCTTC | 2 cut(s) | 146, 1734 |
| HpyCH4III | ACNGT | 4 cut(s) | 182, 545, 668, 817 |
| HpyCH4IV | ACGT | 2 cut(s) | 539, 1389 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 168, 348, 497, 615, 922 |
| HpyF3I | CTNAG | 4 cut(s) | 555, 657, 686, 1736 |
| HpySE526I | ACGT | 2 cut(s) | 539, 1389 |
| Hsp92I | GRCGYC | 1 cut(s) | 375 |
| Hsp92II | CATG | 7 cut(s) | 346, 382, 420, 1214, 1370, 1499, 1663 |
| Ksp22I | TGATCA | 1 cut(s) | 1327 |
| KspI | CCGCGG | 1 cut(s) | 235 |
| LmnI | GCTCC | 2 cut(s) | 1050, 1384 |
| Lsp1109I | GCAGC | 6 cut(s) | 180, 423, 503, 621, 724, 746 |
| LweI | GCATC | 4 cut(s) | 1128, 1261, 1595, 1617 |
| MaeI | CTAG | 5 cut(s) | 396, 776, 1037, 1254, 1686 |
| MaeII | ACGT | 2 cut(s) | 539, 1389 |
| MaeIII | GTNAC | 7 cut(s) | 48, 95, 345, 623, 692, 1166, 1256 |
| MflI | RGATCY | 2 cut(s) | 84, 1742 |
| MhlI | GDGCHC | 1 cut(s) | 584 |
| MlsI | TGGCCA | 1 cut(s) | 1016 |
| MluCI | AATT | 9 cut(s) | 675, 753, 858, 884, 989, 1102, 1117, 1230, 1290 |
| MluNI | TGGCCA | 1 cut(s) | 1016 |
| MlyI | GAGTC | 2 cut(s) | 305, 1276 |
| MmeI | TCCRAC | 3 cut(s) | 576, 1511, 1740 |
| Mox20I | TGGCCA | 1 cut(s) | 1016 |
| Mph1103I | ATGCAT | 2 cut(s) | 269, 1610 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1077 |
| MscI | TGGCCA | 1 cut(s) | 1016 |
| MseI | TTAA | 4 cut(s) | 243, 993, 1041, 1413 |
| Msp20I | TGGCCA | 1 cut(s) | 1016 |
| MspA1I | CMGCKG | 4 cut(s) | 171, 234, 690, 737 |
| MspI | CCGG | 3 cut(s) | 770, 1347, 1755 |
| MspR9I | CCNGG | 3 cut(s) | 771, 783, 1756 |
| MvaI | CCWGG | 1 cut(s) | 783 |
| MvnI | CGCG | 1 cut(s) | 234 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 168, 348, 497, 615, 922 |
| NciI | CCSGG | 2 cut(s) | 771, 1756 |
| NcoI | CCATGG | 2 cut(s) | 416, 1659 |
| NlaIII | CATG | 7 cut(s) | 346, 382, 420, 1214, 1370, 1499, 1663 |
| NlaIV | GGNNCC | 2 cut(s) | 932, 1380 |
| NmuCI | GTSAC | 1 cut(s) | 623 |
| NsiI | ATGCAT | 2 cut(s) | 269, 1610 |
| NspI | RCATGY | 2 cut(s) | 346, 1499 |
| NspV | TTCGAA | 1 cut(s) | 1228 |
| PaeI | GCATGC | 1 cut(s) | 1499 |
| PagI | TCATGA | 1 cut(s) | 1210 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1077 |
| PfeI | GAWTC | 4 cut(s) | 383, 635, 1217, 1583 |
| Pfl23II | CGTACG | 1 cut(s) | 540 |
| PinAI | ACCGGT | 1 cut(s) | 1346 |
| PkrI | GCNGC | 8 cut(s) | 170, 233, 236, 413, 493, 611, 736, 739 |
| PleI | GAGTC | 2 cut(s) | 304, 1276 |
| PpsI | GAGTC | 2 cut(s) | 304, 1276 |
| Ppu21I | YACGTR | 2 cut(s) | 540, 1390 |
| PpuMI | RGGWCCY | 1 cut(s) | 1504 |
| PsiI | TTATAA | 1 cut(s) | 1511 |
| Psp5II | RGGWCCY | 1 cut(s) | 1504 |
| Psp6I | CCWGG | 1 cut(s) | 781 |
| PspGI | CCWGG | 1 cut(s) | 781 |
| PspLI | CGTACG | 1 cut(s) | 540 |
| PspN4I | GGNNCC | 2 cut(s) | 932, 1380 |
| PspPI | GGNCC | 3 cut(s) | 779, 813, 1504 |
| PspPPI | RGGWCCY | 1 cut(s) | 1504 |
| PstI | CTGCAG | 1 cut(s) | 611 |
| PsuI | RGATCY | 2 cut(s) | 84, 1742 |
| PvuII | CAGCTG | 2 cut(s) | 690, 737 |
| RsaI | GTAC | 4 cut(s) | 67, 332, 542, 1713 |
| RsaNI | GTAC | 4 cut(s) | 66, 331, 541, 1712 |
| Rsr2I | CGGWCCG | 1 cut(s) | 813 |
| RsrII | CGGWCCG | 1 cut(s) | 813 |
| SacII | CCGCGG | 1 cut(s) | 235 |
| SaqAI | TTAA | 4 cut(s) | 243, 993, 1041, 1413 |
| SatI | GCNGC | 8 cut(s) | 169, 232, 235, 412, 492, 610, 735, 738 |
| Sau96I | GGNCC | 3 cut(s) | 779, 813, 1504 |
| ScaI | AGTACT | 1 cut(s) | 67 |
| SchI | GAGTC | 2 cut(s) | 305, 1276 |
| ScrFI | CCNGG | 3 cut(s) | 771, 783, 1756 |
| SduI | GDGCHC | 1 cut(s) | 584 |
| SfaNI | GCATC | 4 cut(s) | 1128, 1261, 1595, 1617 |
| SfcI | CTRYAG | 2 cut(s) | 607, 1426 |
| Sfr303I | CCGCGG | 1 cut(s) | 235 |
| SfuI | TTCGAA | 1 cut(s) | 1228 |
| SgrBI | CCGCGG | 1 cut(s) | 235 |
| SinI | GGWCC | 3 cut(s) | 779, 813, 1504 |
| SmlI | CTYRAG | 3 cut(s) | 156, 515, 697 |
| SmoI | CTYRAG | 3 cut(s) | 156, 515, 697 |
| SnaBI | TACGTA | 2 cut(s) | 540, 1390 |
| SphI | GCATGC | 1 cut(s) | 1499 |
| Sse9I | AATT | 9 cut(s) | 675, 753, 858, 884, 989, 1102, 1117, 1230, 1290 |
| SsiI | CCGC | 7 cut(s) | 171, 232, 234, 498, 1141, 1192, 1775 |
| SspMI | CTAG | 5 cut(s) | 396, 776, 1037, 1254, 1686 |
| StyD4I | CCNGG | 3 cut(s) | 769, 781, 1754 |
| StyI | CCWWGG | 4 cut(s) | 76, 416, 1048, 1659 |
| TaaI | ACNGT | 4 cut(s) | 182, 545, 668, 817 |
| TaiI | ACGT | 2 cut(s) | 542, 1392 |
| TaqI | TCGA | 3 cut(s) | 1113, 1228, 1769 |
| TasI | AATT | 9 cut(s) | 675, 753, 858, 884, 989, 1102, 1117, 1230, 1290 |
| TatI | WGTACW | 1 cut(s) | 65 |
| TauI | GCSGC | 2 cut(s) | 234, 237 |
| TfiI | GAWTC | 4 cut(s) | 383, 635, 1217, 1583 |
| Tru1I | TTAA | 4 cut(s) | 243, 993, 1041, 1413 |
| Tru9I | TTAA | 4 cut(s) | 243, 993, 1041, 1413 |
| TscAI | CASTG | 2 cut(s) | 584, 954 |
| TseFI | GTSAC | 1 cut(s) | 623 |
| TseI | GCWGC | 6 cut(s) | 168, 411, 491, 609, 734, 737 |
| Tsp45I | GTSAC | 1 cut(s) | 623 |
| TspDTI | ATGAA | 6 cut(s) | 720, 1086, 1111, 1199, 1226, 1227 |
| TspGWI | ACGGA | 3 cut(s) | 329, 455, 1503 |
| TspRI | CASTG | 2 cut(s) | 584, 954 |
| VneI | GTGCAC | 1 cut(s) | 580 |
| VpaK11BI | GGWCC | 3 cut(s) | 779, 813, 1504 |
| XapI | RAATTY | 2 cut(s) | 989, 1102 |
| XceI | RCATGY | 2 cut(s) | 346, 1499 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1077 |
| XspI | CTAG | 5 cut(s) | 396, 776, 1037, 1254, 1686 |
| ZrmI | AGTACT | 1 cut(s) | 67 |
| Zsp2I | ATGCAT | 2 cut(s) | 269, 1610 |