MD05G1337000.v1.1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
45882542 .. 45886290
3749 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1337000.v1.1.491

Sequence Viewer

Length: 2055 bp
ATGCCAGCAATGGATTCCTCAAGATTTCTATTCTGCCTCTTTCCCATTCTGTTTCTCATGATTAATCAAGCCCTTGGTCAAAATTGCATAGACGGAAAAGGAAACTATACCACCAATAGTACCTATCAGACAAACCTCAACCGCCTCCTCTCCTCCCTGCCCTCCGACGAAAACGGCAACGGGTATGGCTTTTATAATGCATCCTATCGCCTAAACTCGTCGAACGAGCACATTTATGCAATCGGGCTTTGTAGAGGAGATGTCACGGTGGGAGATTGTCGTAGCTGCCTAAATAATTCCCGATATGATCTCCTTCAGCGTTGTCCTAATCAGAAGGAAGCATTTGGATCGTATGAGAAATGCAATTTACGCTACTCAAACCGCTCCATCTATGGCGTCATGGAAACTGAGCCTTCGCGGCCTTCGCCGTATTACTGGAACATAAATAACATATCGTCGTCCGAGCTGGATGGATTCAACCAAGAGCTGGAGAAGCTACTGGACAGCATAAGAAGGGAAGCTGCAGCTGGCGGTTCTCTTCGGAAATTTGCATTCGGAAACACAAGTGCCCCAACTTTCCAAACAATATTTGCACTAGCGCAATGCACGCCAGACATATCAGAGCAAAATTGCAGTGATTGCTTAGTTGGGGCTTTTGCATATAGCTCCAATTTTTACGGGAAAGTAGGTGGGGGAGTTAATAAACCTAGCTGTTACTTTAGATTCGATCTTTACCCCTTCTATGACCCTACAACTGTCAAACAACTGCCATCTCCGCCACCAATACATTCTCCACCACCATCAACCAATACCACAAACACTTCACAAGGATTGAAGAACGGCAAATCTCGGACTGTCATCATTATTGTTGTGCCAATTATTGCTTCTTTGGTACTAGCAATGTTCATGGGCATTTGTCTAAGAGTACGGAATGCAAAGAAAATGTTTCAAAGTAATTTAATTCCAGGCGAAGACATGGACGAAATTGGAAGTGCAGAATCCTTGCAATTCAATTTTGACACCATTAGAATTGCCGCAGATGACTTTTCTGAAGCCAATAAACTAGGACAAGGAGGATTTGGTTCTGTTTACAAGTTCTCCGAATATAACAAGTTAGGCGAAGGTGGATTCGGTGCAGTTTTCAAGGGAATGCTTATTAGTGGACAAGAAATAGCAGTAAAGAGGTTGTCAAAAAGCTCCGGACAAGGTGTACAAGAATTTAAGAACGAGGTTGTATTGGTAGCCAAGCTTCAACACAGAAATCTTGTCAGGCTATTAGGATTTTGCTTGGAAGGAGAAGAAACCATACTTGTTTATGAATATGTGCCCAACAAAAGCCTTGATTATTTTTTATTTGAACATAAAAAACGAGAACAACTAGATTGGTTGAGCCGCACCATGATAATTGGAGGAATTGCTCGAGGAATTTTGTATCTTCATGAAGATTCGAGGCTTAGAGTTATACATCGTGATTTGAAAGCTAGCAACATTTTATTAGATAGCAACATGAATCCGAAAATATCAGATTTTGGGATGGCTAGAATGTTTGGAATTGATGATCAAACTGAAGGAAATACCAAAAGAATTGTTGGTACTTATGGTTACATGGTTCCAGAATATGCTATGGAAGGGTTGTATTCAGTAAAATCGGATGTCTTCAGCTTCGGAGTACTTCTGCTTGAGATCATAACGGGGAGAAGGAACTTTTTAGGCTTTCATCGCACAAATTGTAAACCTACTCTTATAGGTTATGCTTGGCAATTATGGAATGAAACGAAAGGGTTGGAGTTGATGGATCCCTTGTTAAAAGATTCCTGCAGTCCAAATGAATTTTTGAGGTACATCCACATTGGACTATTGTGTGTTCAAGAAGATGCAAACAACAGGCCGACCATGTCCTCAGTTGTTCTTATGTTAAAAAGTGAAACTATTATTCTTCCCAGACCTGAGAAACCAGCCTTCTTTACAGGAGGATATGTTGACCACCATGATCAAGTGCGTCCTCAAGATTGCTCAGGCAATGGTTTGACCATTTCTATCGATGTTCCTCGTTGA

Protein Analysis

685

Amino Acids

76.55

Weight (kDa)

6.8

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 29 - 128 4.8e-23 Salt stress response/antifungal
Stress-antifung PF01657 156 - 244 2.3e-09 Salt stress response/antifungal
Pkinase PF00069 367 - 576 8.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 369 - 636 5.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 195
AccB7I CCANNNNNTGG 1 cut(s) 487
AccBSI CCGCTC 1 cut(s) 384
AccII CGCG 1 cut(s) 418
AccIII TCCGGA 1 cut(s) 1199
AciI CCGC 7 cut(s) 142, 382, 418, 531, 776, 1035, 1393
AclWI GGATC 3 cut(s) 355, 1790, 1803
AcsI RAATTY 4 cut(s) 545, 1217, 1425, 1829
AcuI CTGAAG 4 cut(s) 299, 1071, 1587, 1642
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 7 cut(s) 121, 894, 927, 1212, 1594, 1671, 1841
AfiI CCNNNNNNNGG 1 cut(s) 487
AgsI TTSAA 9 cut(s) 478, 835, 950, 1012, 1144, 1253, 1358, 1477, 1868
AjnI CCWGG 1 cut(s) 964
AjuI GAANNNNNNNTTGG 2 cut(s) 868, 900
Alw21I GWGCWC 1 cut(s) 231
AlwI GGATC 3 cut(s) 355, 1790, 1803
Ama87I CYCGRG 1 cut(s) 1419
Aor13HI TCCGGA 1 cut(s) 1199
AoxI GGCC 2 cut(s) 419, 1886
ApeKI GCWGC 3 cut(s) 285, 521, 524
ApoI RAATTY 4 cut(s) 545, 1217, 1425, 1829
AseI ATTAAT 1 cut(s) 63
AspLEI GCGC 1 cut(s) 601
AsuNHI GCTAGC 1 cut(s) 1481
AvaI CYCGRG 1 cut(s) 1419
BaeGI GKGCMC 2 cut(s) 571, 1329
BamHI GGATCC 1 cut(s) 1795
BarI GAAGNNNNNNTAC 4 cut(s) 1233, 1265, 1290, 1322
BbsI GAAGAC 2 cut(s) 978, 1648
Bbv12I GWGCWC 1 cut(s) 231
BbvI GCAGC 3 cut(s) 272, 508, 536
BccI CCATC 6 cut(s) 395, 464, 778, 808, 1528, 1786
BceAI ACGGC 3 cut(s) 190, 412, 856
BcgI CGANNNNNNTGC 2 cut(s) 330, 364
BciT130I CCWGG 1 cut(s) 966
BclI TGATCA 2 cut(s) 1558, 1990
BfaI CTAG 7 cut(s) 596, 708, 896, 1064, 1379, 1482, 1539
BfmI CTRYAG 2 cut(s) 522, 1816
BglI GCCNNNNNGGC 1 cut(s) 418
BisI GCNGC 6 cut(s) 286, 419, 522, 525, 1035, 1393
BlsI GCNGC 6 cut(s) 287, 420, 523, 526, 1036, 1394
BmcAI AGTACT 1 cut(s) 1671
Bme1390I CCNGG 1 cut(s) 966
BmeT110I CYCGRG 1 cut(s) 1419
BmiI GGNNCC 2 cut(s) 1611, 1797
BmrFI CCNGG 1 cut(s) 966
BmsI GCATC 2 cut(s) 209, 1864
BmtI GCTAGC 1 cut(s) 1485
BpiI GAAGAC 2 cut(s) 978, 1648
BpmI CTGGAG 1 cut(s) 509
Bpu10I CCTNAGC 1 cut(s) 2014
BpuEI CTTGAG 3 cut(s) 4, 1700, 1989
Bsa29I ATCGAT 1 cut(s) 2040
BsaHI GRCGYC 1 cut(s) 396
BsaJI CCNNGG 1 cut(s) 73
BsaWI WCCGGW 1 cut(s) 1199
BsaXI ACNNNNNCTCC 4 cut(s) 1082, 1112, 1962, 1992
Bsc4I CCNNNNNNNGG 1 cut(s) 487
Bse1I ACTGG 2 cut(s) 440, 504
Bse3DI GCAATG 4 cut(s) 15, 608, 906, 2026
BseAI TCCGGA 1 cut(s) 1199
BseBI CCWGG 1 cut(s) 966
BseCI ATCGAT 1 cut(s) 2040
BseDI CCNNGG 1 cut(s) 73
BseGI GGATG 5 cut(s) 200, 475, 1539, 1657, 1842
BseLI CCNNNNNNNGG 1 cut(s) 487
BseMI GCAATG 4 cut(s) 15, 608, 906, 2026
BseMII CTCAG 4 cut(s) 399, 1914, 1938, 2028
BseNI ACTGG 2 cut(s) 440, 504
BseRI GAGGAG 3 cut(s) 137, 142, 270
BseSI GKGCMC 2 cut(s) 571, 1329
BseXI GCAGC 3 cut(s) 272, 508, 536
BsgI GTGCAG 2 cut(s) 1014, 1155
Bsh1236I CGCG 1 cut(s) 418
BshFI GGCC 2 cut(s) 421, 1888
BshVI ATCGAT 1 cut(s) 2040
BsiHKAI GWGCWC 1 cut(s) 231
BsiHKCI CYCGRG 1 cut(s) 1419
BsiSI CCGG 1 cut(s) 1200
BslI CCNNNNNNNGG 1 cut(s) 487
BsmI GAATGC 3 cut(s) 551, 937, 1155
BsnI GGCC 2 cut(s) 421, 1888
BsoBI CYCGRG 1 cut(s) 1419
Bsp1286I GDGCHC 3 cut(s) 231, 571, 1329
Bsp13I TCCGGA 1 cut(s) 1199
Bsp1407I TGTACA 1 cut(s) 1210
Bsp143I GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
BspACI CCGC 7 cut(s) 142, 382, 418, 531, 776, 1035, 1393
BspANI GGCC 2 cut(s) 421, 1888
BspCNI CTCAG 4 cut(s) 400, 1913, 1939, 2027
BspDI ATCGAT 1 cut(s) 2040
BspEI TCCGGA 1 cut(s) 1199
BspFNI CGCG 1 cut(s) 418
BspHI TCATGA 2 cut(s) 57, 1438
BspLI GGNNCC 2 cut(s) 1611, 1797
BspMAI CTGCAG 2 cut(s) 526, 1820
BspOI GCTAGC 1 cut(s) 1485
BspPI GGATC 3 cut(s) 355, 1790, 1803
BsrBI CCGCTC 1 cut(s) 384
BsrDI GCAATG 4 cut(s) 15, 608, 906, 2026
BsrGI TGTACA 1 cut(s) 1210
BsrI ACTGG 2 cut(s) 440, 504
BssECI CCNNGG 1 cut(s) 73
BssMI GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
BssNI GRCGYC 1 cut(s) 396
BssT1I CCWWGG 1 cut(s) 73
Bst2UI CCWGG 1 cut(s) 966
Bst4CI ACNGT 3 cut(s) 268, 757, 856
Bst6I CTCTTC 1 cut(s) 543
BstACI GRCGYC 1 cut(s) 396
BstAPI GCANNNNNTGC 1 cut(s) 639
BstAUI TGTACA 1 cut(s) 1210
BstC8I GCNNGC 4 cut(s) 6, 529, 608, 1483
BstDEI CTNAG 7 cut(s) 408, 643, 920, 1454, 1900, 1947, 2014
BstF5I GGATG 5 cut(s) 200, 475, 1539, 1657, 1842
BstFNI CGCG 1 cut(s) 418
BstHHI GCGC 1 cut(s) 601
BstKTI GATC 7 cut(s) 310, 350, 730, 1561, 1686, 1798, 1993
BstMBI GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
BstMWI GCNNNNNNNGC 8 cut(s) 369, 418, 424, 493, 607, 639, 775, 1719
BstNI CCWGG 1 cut(s) 966
BstSCI CCNGG 1 cut(s) 964
BstSFI CTRYAG 2 cut(s) 522, 1816
BstSLI GKGCMC 2 cut(s) 571, 1329
BstUI CGCG 1 cut(s) 418
BstV1I GCAGC 3 cut(s) 272, 508, 536
BstV2I GAAGAC 2 cut(s) 978, 1648
BstX2I RGATCY 1 cut(s) 1795
BstYI RGATCY 1 cut(s) 1795
Bsu15I ATCGAT 1 cut(s) 2040
BsuRI GGCC 2 cut(s) 421, 1888
BsuTUI ATCGAT 1 cut(s) 2040
BtgZI GCGATG 1 cut(s) 1703
BtsCI GGATG 5 cut(s) 200, 475, 1539, 1657, 1842
BtsI GCAGTG 1 cut(s) 640
BtsIMutI CAGTG 1 cut(s) 640
Cac8I GCNNGC 4 cut(s) 6, 529, 608, 1483
CciI TCATGA 2 cut(s) 57, 1438
CfoI GCGC 1 cut(s) 601
ClaI ATCGAT 1 cut(s) 2040
CseI GACGC 2 cut(s) 385, 1988
Csp6I GTAC 7 cut(s) 120, 893, 926, 1211, 1593, 1670, 1840
CviQI GTAC 7 cut(s) 120, 893, 926, 1211, 1593, 1670, 1840
DdeI CTNAG 7 cut(s) 408, 643, 920, 1454, 1900, 1947, 2014
DpnI GATC 7 cut(s) 309, 349, 729, 1560, 1685, 1797, 1992
DpnII GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
Eam1104I CTCTTC 1 cut(s) 543
EarI CTCTTC 1 cut(s) 543
EciI GGCGGA 1 cut(s) 765
Eco130I CCWWGG 1 cut(s) 73
Eco57I CTGAAG 4 cut(s) 299, 1071, 1587, 1642
Eco88I CYCGRG 1 cut(s) 1419
EcoRII CCWGG 1 cut(s) 964
EcoT14I CCWWGG 1 cut(s) 73
EcoT22I ATGCAT 1 cut(s) 202
ErhI CCWWGG 1 cut(s) 73
FbaI TGATCA 2 cut(s) 1558, 1990
Fnu4HI GCNGC 6 cut(s) 286, 419, 522, 525, 1035, 1393
FokI GGATG 5 cut(s) 187, 482, 1546, 1664, 1829
Fsp4HI GCNGC 6 cut(s) 286, 419, 522, 525, 1035, 1393
FspBI CTAG 7 cut(s) 596, 708, 896, 1064, 1379, 1482, 1539
GlaI GCGC 1 cut(s) 600
GluI GCNGC 6 cut(s) 286, 419, 522, 525, 1035, 1393
GsuI CTGGAG 1 cut(s) 509
HaeIII GGCC 2 cut(s) 421, 1888
HapII CCGG 1 cut(s) 1200
HgaI GACGC 2 cut(s) 385, 1988
HhaI GCGC 1 cut(s) 601
Hin1I GRCGYC 1 cut(s) 396
Hin6I GCGC 1 cut(s) 599
HinP1I GCGC 1 cut(s) 599
HincII GTYRAC 1 cut(s) 1981
HindII GTYRAC 1 cut(s) 1981
HindIII AAGCTT 1 cut(s) 1247
HinfI GANTC 8 cut(s) 14, 474, 723, 998, 1128, 1445, 1510, 1811
HpaII CCGG 1 cut(s) 1200
Hpy166II GTNNAC 5 cut(s) 1090, 1163, 1211, 1733, 1981
Hpy188III TCNNGA 9 cut(s) 21, 58, 300, 1200, 1439, 1469, 1613, 1868, 2006
Hpy8I GTNNAC 5 cut(s) 1090, 1163, 1211, 1733, 1981
Hpy99I CGWCG 3 cut(s) 170, 223, 460
HpyCH4III ACNGT 3 cut(s) 268, 757, 856
HpyF10VI GCNNNNNNNGC 8 cut(s) 369, 418, 424, 493, 607, 639, 775, 1719
HpyF3I CTNAG 7 cut(s) 408, 643, 920, 1454, 1900, 1947, 2014
Hsp92I GRCGYC 1 cut(s) 396
HspAI GCGC 1 cut(s) 599
Kpn2I TCCGGA 1 cut(s) 1199
Ksp22I TGATCA 2 cut(s) 1558, 1990
Kzo9I GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
LmnI GCTCC 3 cut(s) 389, 671, 1202
Lsp1109I GCAGC 3 cut(s) 272, 508, 536
LweI GCATC 2 cut(s) 209, 1864
MaeI CTAG 7 cut(s) 596, 708, 896, 1064, 1379, 1482, 1539
MaeIII GTNAC 3 cut(s) 262, 713, 1601
MalI GATC 7 cut(s) 309, 349, 729, 1560, 1685, 1797, 1992
MbiI CCGCTC 1 cut(s) 384
MboI GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
MboII GAAGA 9 cut(s) 530, 847, 983, 1310, 1427, 1454, 1648, 1883, 1928
MflI RGATCY 1 cut(s) 1795
MhlI GDGCHC 3 cut(s) 231, 571, 1329
MmeI TCCRAC 2 cut(s) 189, 1764
Mph1103I ATGCAT 1 cut(s) 202
MroI TCCGGA 1 cut(s) 1199
MseI TTAA 6 cut(s) 63, 699, 959, 1221, 1805, 1916
MslI CAYNNNNRTG 1 cut(s) 234
MspA1I CMGCKG 1 cut(s) 527
MspI CCGG 1 cut(s) 1200
MspR9I CCNGG 1 cut(s) 966
Mva1269I GAATGC 3 cut(s) 551, 937, 1155
MvaI CCWGG 1 cut(s) 966
MvnI CGCG 1 cut(s) 418
MwoI GCNNNNNNNGC 8 cut(s) 369, 418, 424, 493, 607, 639, 775, 1719
NdeII GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
NheI GCTAGC 1 cut(s) 1481
NlaIV GGNNCC 2 cut(s) 1611, 1797
NmuCI GTSAC 1 cut(s) 262
NsiI ATGCAT 1 cut(s) 202
PaeR7I CTCGAG 1 cut(s) 1419
PagI TCATGA 2 cut(s) 57, 1438
PctI GAATGC 3 cut(s) 551, 937, 1155
PfeI GAWTC 8 cut(s) 14, 474, 723, 998, 1128, 1445, 1510, 1811
PflFI GACNNNGTC 1 cut(s) 1894
PflMI CCANNNNNTGG 1 cut(s) 487
PkrI GCNGC 6 cut(s) 287, 420, 523, 526, 1036, 1394
PshBI ATTAAT 1 cut(s) 63
PsiI TTATAA 1 cut(s) 195
Psp6I CCWGG 1 cut(s) 964
PspGI CCWGG 1 cut(s) 964
PspN4I GGNNCC 2 cut(s) 1611, 1797
PspXI VCTCGAGB 1 cut(s) 1419
PstI CTGCAG 2 cut(s) 526, 1820
PsuI RGATCY 1 cut(s) 1795
PsyI GACNNNGTC 1 cut(s) 1894
PvuII CAGCTG 1 cut(s) 527
RsaI GTAC 7 cut(s) 121, 894, 927, 1212, 1594, 1671, 1841
RsaNI GTAC 7 cut(s) 120, 893, 926, 1211, 1593, 1670, 1840
RseI CAYNNNNRTG 1 cut(s) 234
SaqAI TTAA 6 cut(s) 63, 699, 959, 1221, 1805, 1916
SatI GCNGC 6 cut(s) 286, 419, 522, 525, 1035, 1393
Sau3AI GATC 7 cut(s) 307, 347, 727, 1558, 1683, 1795, 1990
ScaI AGTACT 1 cut(s) 1671
ScrFI CCNGG 1 cut(s) 966
SduI GDGCHC 3 cut(s) 231, 571, 1329
SfaNI GCATC 2 cut(s) 209, 1864
SfcI CTRYAG 2 cut(s) 522, 1816
Sfr274I CTCGAG 1 cut(s) 1419
SlaI CTCGAG 1 cut(s) 1419
SmiMI CAYNNNNRTG 1 cut(s) 234
SmlI CTYRAG 4 cut(s) 19, 1419, 1679, 2004
SmoI CTYRAG 4 cut(s) 19, 1419, 1679, 2004
SsiI CCGC 7 cut(s) 142, 382, 418, 531, 776, 1035, 1393
SspI AATATT 1 cut(s) 588
SspMI CTAG 7 cut(s) 596, 708, 896, 1064, 1379, 1482, 1539
StyD4I CCNGG 1 cut(s) 964
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 3 cut(s) 268, 757, 856
TaqI TCGA 5 cut(s) 221, 726, 1420, 1448, 2040
TatI WGTACW 2 cut(s) 1210, 1669
TauI GCSGC 3 cut(s) 421, 1037, 1395
TfiI GAWTC 8 cut(s) 14, 474, 723, 998, 1128, 1445, 1510, 1811
Tru1I TTAA 6 cut(s) 63, 699, 959, 1221, 1805, 1916
Tru9I TTAA 6 cut(s) 63, 699, 959, 1221, 1805, 1916
TscAI CASTG 1 cut(s) 640
TseFI GTSAC 1 cut(s) 262
TseI GCWGC 3 cut(s) 285, 521, 524
Tsp45I GTSAC 1 cut(s) 262
TspDTI ATGAA 8 cut(s) 895, 1332, 1427, 1455, 1523, 1706, 1785, 1842
TspGWI ACGGA 2 cut(s) 108, 943
TspRI CASTG 1 cut(s) 640
Tth111I GACNNNGTC 1 cut(s) 1894
Van91I CCANNNNNTGG 1 cut(s) 487
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 4 cut(s) 545, 1217, 1425, 1829
XhoI CTCGAG 1 cut(s) 1419
XspI CTAG 7 cut(s) 596, 708, 896, 1064, 1379, 1482, 1539
ZrmI AGTACT 1 cut(s) 1671
Zsp2I ATGCAT 1 cut(s) 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.