Rroxscaffold_4G00328340

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
61287460 .. 61293151
5692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328340.1

Sequence Viewer

Length: 1929 bp
ATGAATCAAGGGATTGGCATGGTACCATGGTTTTCTCAAGTTTTGGATTTGGAATTTTCCTTTCTATACAACTTCTGGAACTCGTTATCATTGAAGCCGTTGATCTACACTTCGTTTGTTCAAACAACAGGGGTAGCTACACCACCGGTAGTGTTTATCAGAAAAACCTCAACGACTTTCTCTCCTCCCTCGTCACTAATGAGAGCAGCAACGGCTATGGCCTCTACAACTCCTCTTTTGGCCAAGACGATGATATCATCGACAAAGTATATGCCATCGGGCTTTGTAGACCGGATCTTATACCGGGTGCTTCCCTCAAATCCTTCAAAGACTCGGCATACAATCTCACAAGGGCTTGTCCAAATCAAAAAGGAGGCAATCATATGGAATGAGTATTGCATGGTACGCTACTCCAACCGCTCCCTTCATCTTGAGCTTTCGCCTAGCTACAATCAATCGACCACGAAAAACCTATCTTCGTCGAATGTCGTTTCATTCAATCTTGAGCTGGAGGAGTTAATCGGAGGACTGAAAAGTCAAGCAGCTGCAGGTGGTCTTCAGAAAAAGTTTGCAACGGAAAGGAAAAGGGTTGCGTATTCCAACAATCAATCAATATCTGGAATCGTACAGTGCATTCCGGACTTGTCGGAGGAGGACTGCAGTTTCTGCTTGGATGAGGGTTTGAGACAGCTTCAGAACTGTTGTTATGGGATGGATTCTGCGAGATTTGGTAATCCGAGCTGCAATTTGAGGTATGATGTTTTCACCTCCAATGATCCAGCTACCACCGATGATCCAGCTAAATATCATGAACCACGAGCACTATCTCCTCCTACTCCGCCATCAGCCAATGCACCCAAAAATTCAGGAGGGACTGTCATCATTATTGCTATGGCAACGGTTGTTTCCTTCTTGATTCTAATTATGTCCATCTGCATCTATCTGAGAGTGAAGAATAAAAGGAAAGGAATTGAAGAAGAAATCAAATCTGCTGAGGCTTTACAATTCGACTTTCGGTCCATTAGAGCTGCCACAAATAACTTTTCGGAAGCAAATAAACTTGGACGGGGAGGATTTGGTATTGTTTACAGGGGTATACTTCTCGATGATAAGGACATAGCGATTAAAAGGCTTTCGAGGGATTCTGCACAAGGAGATTTAGAATTCAAAACTGAGGTCTCGCTAGTGGCCAGGCTTCAACATAGGAATTTGGTTAGGCTTCTTGGTTTCTGCCTGGAAAAAAATGAAAAGATTCTTGTTTATGAGTTTGTCCCTAACGGAAGTCTTGATCAATTCATATTTGGTGAAGACAAGCGCGCACATTTGGATTGGGATATTCGCTACAAAATCATAGTAGGCATTGCGAGAGGGCTCCTTTACCTTCATGAAGATTCTCGTCTTAAAATCATTCACCGTGATCTCAAAGCTAGCAACATTCTGTTAGATGCAGACATGAACCCCAAAATTGCAGATTTTGGTATGGCGAGATTGTTTGATCTTGATCAATCACAAGGTGAAACCAGACGAGTTGTGGGAACTTACGGATATATGGCTCCAGAGTATGTGATGCGTGGACAATTTTCGGTTAAGTCTGATGTCTTCAGCTTTGGTGTCTTGGTTTTGGAGACAGTAAGTGGACAAAAGAATAGTTCTTTTCGTAATAGAGGAAATGTGGAGGATCTTCTGAGCTATGCATGGAAAAATTGGAGAGCAGATACGGCTTCAAATATAATAGATCCCAACTTGAGTTCTGGTTCAAGAACTGAGATGATGAGATGCATCAACATTGGATTGTTATGTGTGCAACAAAATATGGCTGATAGGCCAACAATGACTTCAGTTATTCTCATGCTCACTGGCAACTCTCTCTCTTCCAGTACCCTCACAGCCAGCATTTTTTATGGGTGCATCCGCTTTTCAAAGGTTTAG

Protein Analysis

642

Amino Acids

71.71

Weight (kDa)

9.0

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 161 - 253 1.7e-09 Salt stress response/antifungal
Pkinase PF00069 349 - 614 1.5e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 615 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 539
AasI GACNNNNNNGTC 1 cut(s) 534
Acc36I ACCTGC 1 cut(s) 539
Acc65I GGTACC 1 cut(s) 22
AccB1I GGYRCC 1 cut(s) 22
AccBSI CCGCTC 1 cut(s) 420
AccI GTMKAC 2 cut(s) 288, 1096
AccII CGCG 1 cut(s) 1317
AccIII TCCGGA 1 cut(s) 637
AciI CCGC 3 cut(s) 418, 839, 1912
AclWI GGATC 5 cut(s) 302, 770, 788, 1686, 1730
AcoI YGGCCR 2 cut(s) 240, 1188
AcsI RAATTY 4 cut(s) 53, 862, 1163, 1207
AcuI CTGAAG 4 cut(s) 542, 677, 1585, 1821
AdeI CACNNNGTG 1 cut(s) 1514
AfaI GTAC 4 cut(s) 24, 405, 627, 1879
AgeI ACCGGT 1 cut(s) 145
AhdI GACNNNNNGTC 1 cut(s) 1015
AjnI CCWGG 2 cut(s) 1190, 1233
AjuI GAANNNNNNNTTGG 2 cut(s) 1819, 1851
Alw21I GWGCWC 1 cut(s) 823
Alw26I GTCTC 3 cut(s) 679, 1183, 1619
AlwI GGATC 5 cut(s) 302, 770, 788, 1686, 1730
AlwNI CAGNNNCTG 1 cut(s) 666
Aor13HI TCCGGA 1 cut(s) 637
AoxI GGCC 4 cut(s) 219, 240, 1188, 1823
ApeKI GCWGC 5 cut(s) 206, 542, 545, 741, 1028
ApoI RAATTY 4 cut(s) 53, 862, 1163, 1207
ArsI GACNNNNNNTTYG 2 cut(s) 1161, 1193
AsiGI ACCGGT 1 cut(s) 145
Asp700I GAANNNNTTC 1 cut(s) 1251
Asp718I GGTACC 1 cut(s) 22
AspLEI GCGC 2 cut(s) 1317, 1319
AspS9I GGNCC 1 cut(s) 1017
AsuC2I CCSGG 1 cut(s) 305
AsuHPI GGTGA 4 cut(s) 757, 1316, 1403, 1526
AsuNHI GCTAGC 1 cut(s) 1427
AvaII GGWCC 1 cut(s) 1017
BaeI ACNNNNGTAYC 2 cut(s) 14, 47
BalI TGGCCA 2 cut(s) 242, 1190
BanI GGYRCC 1 cut(s) 22
BanII GRGCYC 1 cut(s) 1374
BauI CACGAG 1 cut(s) 816
BbsI GAAGAC 3 cut(s) 548, 1314, 1591
Bbv12I GWGCWC 1 cut(s) 823
BbvCI CCTCAGC 1 cut(s) 993
BbvI GCAGC 5 cut(s) 218, 532, 554, 728, 1015
BccI CCATC 4 cut(s) 283, 706, 850, 938
BceAI ACGGC 3 cut(s) 82, 228, 1734
BciT130I CCWGG 2 cut(s) 1192, 1235
BclI TGATCA 2 cut(s) 1288, 1501
BcnI CCSGG 1 cut(s) 305
BcoDI GTCTC 3 cut(s) 679, 1183, 1619
BfaI CTAG 3 cut(s) 444, 1184, 1428
BfmI CTRYAG 2 cut(s) 546, 658
BfuAI ACCTGC 1 cut(s) 539
BisI GCNGC 5 cut(s) 207, 543, 546, 742, 1029
BlsI GCNGC 5 cut(s) 208, 544, 547, 743, 1030
Bme1390I CCNGG 3 cut(s) 305, 1192, 1235
Bme18I GGWCC 1 cut(s) 1017
BmeRI GACNNNNNGTC 1 cut(s) 1015
BmgT120I GGNCC 1 cut(s) 1017
BmiI GGNNCC 3 cut(s) 24, 1373, 1554
BmrFI CCNGG 3 cut(s) 305, 1192, 1235
BmsI GCATC 6 cut(s) 945, 1435, 1557, 1766, 1788, 1917
BmtI GCTAGC 1 cut(s) 1431
BpiI GAAGAC 3 cut(s) 548, 1314, 1591
BpmI CTGGAG 2 cut(s) 530, 1539
Bpu10I CCTNAGC 1 cut(s) 993
BpuEI CTTGAG 4 cut(s) 21, 452, 524, 1765
BpuMI CCSGG 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 1500
BsaI GGTCTC 1 cut(s) 1183
BsaJI CCNNGG 1 cut(s) 26
BsaWI WCCGGW 3 cut(s) 145, 291, 637
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 861, 891
Bse118I RCCGGY 1 cut(s) 145
Bse1I ACTGG 2 cut(s) 1861, 1875
Bse3DI GCAATG 1 cut(s) 1359
Bse8I GATNNNNATC 1 cut(s) 1500
BseAI TCCGGA 1 cut(s) 637
BseBI CCWGG 2 cut(s) 1192, 1235
BseDI CCNNGG 1 cut(s) 26
BseGI GGATG 3 cut(s) 679, 717, 1908
BseJI GATNNNNATC 1 cut(s) 1500
BseMI GCAATG 1 cut(s) 1359
BseMII CTCAG 5 cut(s) 935, 984, 1164, 1676, 1755
BseNI ACTGG 2 cut(s) 1861, 1875
BsePI GCGCGC 1 cut(s) 1315
BseRI GAGGAG 5 cut(s) 174, 222, 527, 665, 819
BseXI GCAGC 5 cut(s) 218, 532, 554, 728, 1015
BsgI GTGCAG 1 cut(s) 1131
Bsh1236I CGCG 1 cut(s) 1317
BshFI GGCC 4 cut(s) 221, 242, 1190, 1825
BshNI GGYRCC 1 cut(s) 22
BshTI ACCGGT 1 cut(s) 145
BsiHKAI GWGCWC 1 cut(s) 823
BsiSI CCGG 4 cut(s) 146, 292, 304, 638
BslFI GGGAC 2 cut(s) 886, 1256
BsmAI GTCTC 3 cut(s) 679, 1183, 1619
BsmFI GGGAC 2 cut(s) 886, 1256
BsmI GAATGC 1 cut(s) 633
BsnI GGCC 4 cut(s) 221, 242, 1190, 1825
Bso31I GGTCTC 1 cut(s) 1183
Bsp1286I GDGCHC 2 cut(s) 823, 1374
Bsp13I TCCGGA 1 cut(s) 637
Bsp19I CCATGG 1 cut(s) 26
BspACI CCGC 3 cut(s) 418, 839, 1912
BspANI GGCC 4 cut(s) 221, 242, 1190, 1825
BspCNI CTCAG 5 cut(s) 936, 985, 1165, 1677, 1756
BspEI TCCGGA 1 cut(s) 637
BspFNI CGCG 1 cut(s) 1317
BspHI TCATGA 2 cut(s) 808, 1384
BspLI GGNNCC 3 cut(s) 24, 1373, 1554
BspMAI CTGCAG 2 cut(s) 550, 662
BspMI ACCTGC 1 cut(s) 539
BspOI GCTAGC 1 cut(s) 1431
BspPI GGATC 5 cut(s) 302, 770, 788, 1686, 1730
BspT107I GGYRCC 1 cut(s) 22
BspTNI GGTCTC 1 cut(s) 1183
BsrBI CCGCTC 1 cut(s) 420
BsrDI GCAATG 1 cut(s) 1359
BsrFI RCCGGY 1 cut(s) 145
BsrI ACTGG 2 cut(s) 1861, 1875
BssAI RCCGGY 1 cut(s) 145
BssECI CCNNGG 1 cut(s) 26
BssHII GCGCGC 1 cut(s) 1315
BssNAI GTATAC 1 cut(s) 1097
BssSI CACGAG 1 cut(s) 816
BssT1I CCWWGG 1 cut(s) 26
Bst1107I GTATAC 1 cut(s) 1097
Bst2BI CACGAG 1 cut(s) 816
Bst2UI CCWGG 2 cut(s) 1192, 1235
Bst4CI ACNGT 6 cut(s) 630, 701, 877, 901, 1415, 1630
Bst6I CTCTTC 1 cut(s) 1876
BstAPI GCANNNNNTGC 1 cut(s) 666
BstC8I GCNNGC 3 cut(s) 1317, 1429, 1891
BstDEI CTNAG 5 cut(s) 944, 993, 1173, 1685, 1764
BstDSI CCRYGG 1 cut(s) 26
BstF5I GGATG 3 cut(s) 679, 717, 1908
BstFNI CGCG 1 cut(s) 1317
BstHHI GCGC 2 cut(s) 1317, 1319
BstMAI GTCTC 3 cut(s) 679, 1183, 1619
BstMWI GCNNNNNNNGC 4 cut(s) 212, 405, 666, 1718
BstNI CCWGG 2 cut(s) 1192, 1235
BstSCI CCNGG 3 cut(s) 303, 1190, 1233
BstSFI CTRYAG 2 cut(s) 546, 658
BstUI CGCG 1 cut(s) 1317
BstV1I GCAGC 5 cut(s) 218, 532, 554, 728, 1015
BstV2I GAAGAC 3 cut(s) 548, 1314, 1591
BstX2I RGATCY 3 cut(s) 294, 1678, 1735
BstYI RGATCY 3 cut(s) 294, 1678, 1735
BstZ17I GTATAC 1 cut(s) 1097
BsuRI GGCC 4 cut(s) 221, 242, 1190, 1825
BtgI CCRYGG 1 cut(s) 26
BtsCI GGATG 3 cut(s) 679, 717, 1908
BtsIMutI CAGTG 2 cut(s) 635, 1854
BveI ACCTGC 1 cut(s) 539
Cac8I GCNNGC 3 cut(s) 1317, 1429, 1891
CaiI CAGNNNCTG 1 cut(s) 666
CciI TCATGA 2 cut(s) 808, 1384
CfoI GCGC 2 cut(s) 1317, 1319
Cfr10I RCCGGY 1 cut(s) 145
Cfr13I GGNCC 1 cut(s) 1017
Csp6I GTAC 4 cut(s) 23, 404, 626, 1878
CspAI ACCGGT 1 cut(s) 145
CviAII CATG 8 cut(s) 19, 27, 400, 809, 1385, 1453, 1695, 1849
CviQI GTAC 4 cut(s) 23, 404, 626, 1878
DdeI CTNAG 5 cut(s) 944, 993, 1173, 1685, 1764
DraIII CACNNNGTG 1 cut(s) 1514
DrdI GACNNNNNNGTC 1 cut(s) 534
DriI GACNNNNNGTC 1 cut(s) 1015
DseDI GACNNNNNNGTC 1 cut(s) 534
EaeI YGGCCR 2 cut(s) 240, 1188
Eam1104I CTCTTC 1 cut(s) 1876
Eam1105I GACNNNNNGTC 1 cut(s) 1015
EarI CTCTTC 1 cut(s) 1876
EciI GGCGGA 1 cut(s) 828
Eco130I CCWWGG 1 cut(s) 26
Eco24I GRGCYC 1 cut(s) 1374
Eco31I GGTCTC 1 cut(s) 1183
Eco32I GATATC 1 cut(s) 255
Eco47I GGWCC 1 cut(s) 1017
Eco57I CTGAAG 4 cut(s) 542, 677, 1585, 1821
EcoRI GAATTC 1 cut(s) 1163
EcoRII CCWGG 2 cut(s) 1190, 1233
EcoRV GATATC 1 cut(s) 255
EcoT14I CCWWGG 1 cut(s) 26
EcoT22I ATGCAT 2 cut(s) 1696, 1781
EcoT38I GRGCYC 1 cut(s) 1374
ErhI CCWWGG 1 cut(s) 26
FaeI CATG 8 cut(s) 22, 30, 403, 812, 1388, 1456, 1698, 1852
FaqI GGGAC 2 cut(s) 886, 1256
FatI CATG 8 cut(s) 18, 26, 399, 808, 1384, 1452, 1694, 1848
FauNDI CATATG 1 cut(s) 383
FbaI TGATCA 2 cut(s) 1288, 1501
FblI GTMKAC 2 cut(s) 288, 1096
Fnu4HI GCNGC 5 cut(s) 207, 543, 546, 742, 1029
FokI GGATG 3 cut(s) 686, 724, 1895
FriOI GRGCYC 1 cut(s) 1374
Fsp4HI GCNGC 5 cut(s) 207, 543, 546, 742, 1029
FspBI CTAG 3 cut(s) 444, 1184, 1428
GlaI GCGC 2 cut(s) 1316, 1318
GluI GCNGC 5 cut(s) 207, 543, 546, 742, 1029
GsuI CTGGAG 2 cut(s) 530, 1539
HaeIII GGCC 4 cut(s) 221, 242, 1190, 1825
HapII CCGG 4 cut(s) 146, 292, 304, 638
HhaI GCGC 2 cut(s) 1317, 1319
Hin1II CATG 8 cut(s) 22, 30, 403, 812, 1388, 1456, 1698, 1852
Hin6I GCGC 2 cut(s) 1315, 1317
HinP1I GCGC 2 cut(s) 1315, 1317
HinfI GANTC 8 cut(s) 4, 331, 621, 716, 916, 1142, 1252, 1391
HpaII CCGG 4 cut(s) 146, 292, 304, 638
HphI GGTGA 4 cut(s) 757, 1316, 1403, 1526
Hpy166II GTNNAC 5 cut(s) 289, 1087, 1097, 1574, 1637
Hpy8I GTNNAC 5 cut(s) 289, 1087, 1097, 1574, 1637
Hpy99I CGWCG 1 cut(s) 484
HpyAV CCTTC 4 cut(s) 333, 434, 919, 1391
HpyCH4III ACNGT 6 cut(s) 630, 701, 877, 901, 1415, 1630
HpyF10VI GCNNNNNNNGC 4 cut(s) 212, 405, 666, 1718
HpyF3I CTNAG 5 cut(s) 944, 993, 1173, 1685, 1764
Hsp92II CATG 8 cut(s) 22, 30, 403, 812, 1388, 1456, 1698, 1852
HspAI GCGC 2 cut(s) 1315, 1317
Kpn2I TCCGGA 1 cut(s) 637
KpnI GGTACC 1 cut(s) 26
Ksp22I TGATCA 2 cut(s) 1288, 1501
LmnI GCTCC 3 cut(s) 425, 1377, 1558
Lsp1109I GCAGC 5 cut(s) 218, 532, 554, 728, 1015
LweI GCATC 6 cut(s) 945, 1435, 1557, 1766, 1788, 1917
MaeI CTAG 3 cut(s) 444, 1184, 1428
MaeIII GTNAC 1 cut(s) 192
MbiI CCGCTC 1 cut(s) 420
MflI RGATCY 3 cut(s) 294, 1678, 1735
MhlI GDGCHC 2 cut(s) 823, 1374
MlsI TGGCCA 2 cut(s) 242, 1190
MluNI TGGCCA 2 cut(s) 242, 1190
MlyI GAGTC 1 cut(s) 325
MmeI TCCRAC 3 cut(s) 438, 624, 627
Mox20I TGGCCA 2 cut(s) 242, 1190
Mph1103I ATGCAT 2 cut(s) 1696, 1781
MroI TCCGGA 1 cut(s) 637
MroXI GAANNNNTTC 1 cut(s) 1251
MscI TGGCCA 2 cut(s) 242, 1190
MseI TTAA 4 cut(s) 518, 1125, 1401, 1587
Msp20I TGGCCA 2 cut(s) 242, 1190
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 4 cut(s) 146, 292, 304, 638
MspR9I CCNGG 3 cut(s) 305, 1192, 1235
Mva1269I GAATGC 1 cut(s) 633
MvaI CCWGG 2 cut(s) 1192, 1235
MvnI CGCG 1 cut(s) 1317
MwoI GCNNNNNNNGC 4 cut(s) 212, 405, 666, 1718
NciI CCSGG 1 cut(s) 305
NcoI CCATGG 1 cut(s) 26
NdeI CATATG 1 cut(s) 383
NheI GCTAGC 1 cut(s) 1427
NlaIII CATG 8 cut(s) 22, 30, 403, 812, 1388, 1456, 1698, 1852
NlaIV GGNNCC 3 cut(s) 24, 1373, 1554
NmeAIII GCCGAG 1 cut(s) 313
NmuCI GTSAC 1 cut(s) 192
NsiI ATGCAT 2 cut(s) 1696, 1781
PagI TCATGA 2 cut(s) 808, 1384
PaqCI CACCTGC 1 cut(s) 539
PauI GCGCGC 1 cut(s) 1315
PctI GAATGC 1 cut(s) 633
PdmI GAANNNNTTC 1 cut(s) 1251
PfeI GAWTC 7 cut(s) 4, 621, 716, 916, 1142, 1252, 1391
PinAI ACCGGT 1 cut(s) 145
PkrI GCNGC 5 cut(s) 208, 544, 547, 743, 1030
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
Psp6I CCWGG 2 cut(s) 1190, 1233
PspGI CCWGG 2 cut(s) 1190, 1233
PspN4I GGNNCC 3 cut(s) 24, 1373, 1554
PspPI GGNCC 1 cut(s) 1017
PstI CTGCAG 2 cut(s) 550, 662
PstNI CAGNNNCTG 1 cut(s) 666
PsuI RGATCY 3 cut(s) 294, 1678, 1735
PteI GCGCGC 1 cut(s) 1315
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 4 cut(s) 24, 405, 627, 1879
RsaNI GTAC 4 cut(s) 23, 404, 626, 1878
SaqAI TTAA 4 cut(s) 518, 1125, 1401, 1587
SatI GCNGC 5 cut(s) 207, 543, 546, 742, 1029
Sau96I GGNCC 1 cut(s) 1017
SchI GAGTC 1 cut(s) 325
ScrFI CCNGG 3 cut(s) 305, 1192, 1235
SduI GDGCHC 2 cut(s) 823, 1374
SfaNI GCATC 6 cut(s) 945, 1435, 1557, 1766, 1788, 1917
SfcI CTRYAG 2 cut(s) 546, 658
SinI GGWCC 1 cut(s) 1017
SmlI CTYRAG 4 cut(s) 36, 431, 503, 1744
SmoI CTYRAG 4 cut(s) 36, 431, 503, 1744
SsiI CCGC 3 cut(s) 418, 839, 1912
SspMI CTAG 3 cut(s) 444, 1184, 1428
StyD4I CCNGG 3 cut(s) 303, 1190, 1233
StyI CCWWGG 1 cut(s) 26
TaaI ACNGT 6 cut(s) 630, 701, 877, 901, 1415, 1630
TaqI TCGA 6 cut(s) 260, 458, 482, 1008, 1104, 1136
TaqII GACCGA 1 cut(s) 1005
TfiI GAWTC 7 cut(s) 4, 621, 716, 916, 1142, 1252, 1391
Tru1I TTAA 4 cut(s) 518, 1125, 1401, 1587
Tru9I TTAA 4 cut(s) 518, 1125, 1401, 1587
TscAI CASTG 2 cut(s) 635, 1861
TseFI GTSAC 1 cut(s) 192
TseI GCWGC 5 cut(s) 206, 542, 545, 741, 1028
Tsp45I GTSAC 1 cut(s) 192
TspDTI ATGAA 9 cut(s) 17, 416, 483, 825, 1260, 1285, 1373, 1401, 1469
TspGWI ACGGA 3 cut(s) 590, 1293, 1557
TspRI CASTG 2 cut(s) 635, 1861
VpaK11BI GGWCC 1 cut(s) 1017
XapI RAATTY 4 cut(s) 53, 862, 1163, 1207
XcmI CCANNNNNNNNNTGG 1 cut(s) 1528
XmiI GTMKAC 2 cut(s) 288, 1096
XmnI GAANNNNTTC 1 cut(s) 1251
XspI CTAG 3 cut(s) 444, 1184, 1428
Zsp2I ATGCAT 2 cut(s) 1696, 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.