RLG00000033479

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
27859789 .. 27863350
3562 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033479

Sequence Viewer

Length: 1731 bp
ATGGGATCCTCAATATGGCTACTTCTTTTCTTCTTCGTTCCCATAACCGTACACCACCTTGTTGCTCAACCCATAATAAAAGGCGACGTCTCATGCACTTCGAGGGCTGAATTGTGCTGGAGCTGTGCTGATTCCCGCAAATACACTAATGGCAGCATCTACCATCAAAACCTCATCAGCCTCCTCTCCTCCTTTTCCAACATTTCCCAAAACCAAACCAACTATGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATTGCATTGTGCAGAGGAGATCTCGCACTCGGAGACTGTAGTAGGTGTCTCAGCGACTCCACTCAGATTCTCCTGCGAAACTGTTCATATAAAACGGAAGCAATCTTATGGGCAGAGCCTTGCATGGTACGGTACTCTCAAGACTTAATATTTGGTATTGAGGAGGAGCACCCTTTTATATATCTGCCTAGCCCGAACACCGCGTTAAACCCGCAAGCGTACGGGCAGGTGCTTAACCCCTTGTTGGAAACCTTAAGAGACAGAGCTACTTCAGGTGATTCTCGAAAAAAATATGCAGCAGGACATGCAGTTGTTCCAGCTCCAGCAGGAGATGCAGACGATCGCGAACCGATATATGCACATGCGCAGTGCACGCCGGACATGGACAAAGTCAATTGCAGTAATTGCCTGAACAGTTGCATCTCTGCCATTCCACGATGTTGCAGTGGAAAGTCAGGAACAAGAGTTCTTAGACCAAGTTGTAATATAAGGTTTGAGTACAATCTTTTCTACAATTCCACAGCCGATTCAGAATTAAATATTTCAGTTTCAGCTCCAGCTCCAGCTCCAGTTACTTTAACAACTCCAGTACCTCCACCTAAGCAAGGAAAGAAGAGTAACACAAAAAGAAATATCATCATAACAATTGCGGTTGTGATTGCTTTTGTCACGATGCTTCTCGGTGGCATATGCATTTTCTTAAGAGTCAAGAAGTCAAGGGTAAAACTTGACGACCCAACTAATCATGAACATTTGGATTGGGAAACATGTTACAAGATCATAGAAGGAATTGTTCGTGGTCTTCTTTACCTCCATGAAGATTCTCGACTTCGAGTTATTCACCGTGATCTCAAAGCCAGCAACATTTTGTTAGATGAAGATATGAACCCTAAAATTGCAGATTTTGGTATGACAAGGTTGTTTGTGATGGATCAAACTCAAGCAGATACAAAAACCATTGTTGGGACCTATGGATACATGGCACCTGAATATGCAAGTCATGGGCGCTTTTCTGTCAAATCAGATGTCTTTAGTTTTGGTGTGTTAGTTCTTGAAATAATTACTGGCAAGAAGAGTGGTACTTTCCGAAATGGTGAAAATGAAGACGACCTATTAAGCTACGCTTGGAGAAATTGGAGGGATGATACAACTCTAAATATCATAGATCCCATGTTAACAACAGGCTCAAGATCTGAAATAATCAGATGCATCCAGATTGGTTTATTATGTGTCCAAGAAAATTTGAATGACAGACCAACCATGGGTTCAGTTGTTTCCATGCTTAATAGTCATTCTCTCAAAATCTCGATACCTTCACGGCCTCCATATTATTGGCCTTATAACACTGAGTCAGAGACATCAGGGTCGGGATTCAGACTTACTGAGACGTCTGATAAATCCCAAAGCTCTGTGTCAAGAAGTATGATTTCAGATATTACTGAAGTACATCCACGCTAG

Protein Analysis

577

Amino Acids

64.01

Weight (kDa)

6.9

Isoelectric Point (pI)

45.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 42 - 138 7.1e-21 Salt stress response/antifungal
Stress-antifung PF01657 162 - 257 2.2e-10 Salt stress response/antifungal
PK_Tyr_Ser-Thr PF07714 317 - 518 1.8e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 339 - 458 2.2e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1614
AarI CACCTGC 1 cut(s) 490
AasI GACNNNNNNGTC 1 cut(s) 1636
AatII GACGTC 2 cut(s) 90, 1664
Acc16I TGCGCA 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 490
AccB1I GGYRCC 1 cut(s) 1255
AccII CGCG 2 cut(s) 476, 618
AciI CCGC 4 cut(s) 136, 474, 485, 923
AclWI GGATC 3 cut(s) 13, 1212, 1433
AcsI RAATTY 1 cut(s) 1513
AcuI CTGAAG 1 cut(s) 528
AcyI GRCGYC 2 cut(s) 87, 1661
AfaI GTAC 8 cut(s) 51, 402, 407, 494, 773, 864, 1354, 1719
AfiI CCNNNNNNNGG 5 cut(s) 15, 517, 878, 1236, 1535
AflII CTTAAG 2 cut(s) 526, 973
AflIII ACRYGT 1 cut(s) 1040
AgsI TTSAA 2 cut(s) 1328, 1519
AjuI GAANNNNNNNTTGG 2 cut(s) 1522, 1554
AloI GAACNNNNNNTCC 2 cut(s) 723, 755
AluBI AGCT 8 cut(s) 123, 539, 593, 827, 833, 839, 1392, 1680
AluI AGCT 8 cut(s) 123, 539, 593, 827, 833, 839, 1392, 1680
Alw21I GWGCWC 2 cut(s) 444, 647
Alw26I GTCTC 6 cut(s) 94, 300, 326, 525, 1622, 1652
Alw44I GTGCAC 1 cut(s) 643
AlwI GGATC 3 cut(s) 13, 1212, 1433
AoxI GGCC 2 cut(s) 1592, 1607
ApaLI GTGCAC 1 cut(s) 643
ApeKI GCWGC 2 cut(s) 153, 569
ApoI RAATTY 1 cut(s) 1513
ArsI GACNNNNNNTTYG 4 cut(s) 407, 439, 1284, 1316
Asp700I GAANNNNTTC 1 cut(s) 355
AspLEI GCGC 2 cut(s) 640, 1281
AspS9I GGNCC 1 cut(s) 1239
AsuHPI GGTGA 3 cut(s) 560, 1106, 1379
AvaII GGWCC 1 cut(s) 1239
BaeGI GKGCMC 1 cut(s) 647
BaeI ACNNNNGTAYC 2 cut(s) 846, 879
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1255
BbsI GAAGAC 2 cut(s) 1067, 1383
Bbv12I GWGCWC 2 cut(s) 444, 647
BbvI GCAGC 2 cut(s) 165, 581
BccI CCATC 2 cut(s) 171, 1195
BceAI ACGGC 1 cut(s) 1607
BciVI GTATCC 1 cut(s) 1241
BcoDI GTCTC 6 cut(s) 94, 300, 326, 525, 1622, 1652
BfaI CTAG 2 cut(s) 462, 1729
BfmI CTRYAG 1 cut(s) 310
BfoI RGCGCY 1 cut(s) 1282
BfrI CTTAAG 2 cut(s) 526, 973
BfuAI ACCTGC 1 cut(s) 490
BfuI GTATCC 1 cut(s) 1241
BglII AGATCT 2 cut(s) 292, 1463
BisI GCNGC 2 cut(s) 154, 570
BlsI GCNGC 2 cut(s) 155, 571
Bme18I GGWCC 1 cut(s) 1239
BmgT120I GGNCC 1 cut(s) 1239
BmiI GGNNCC 4 cut(s) 7, 256, 1240, 1257
BmsI GCATC 6 cut(s) 165, 595, 702, 936, 1469, 1491
BpiI GAAGAC 2 cut(s) 1067, 1383
BplI GAGNNNNNCTC 2 cut(s) 279, 311
BpmI CTGGAG 6 cut(s) 139, 579, 813, 819, 825, 843
Bpu10I CCTNAGC 1 cut(s) 873
BpuEI CTTGAG 3 cut(s) 396, 1197, 1444
BsaHI GRCGYC 2 cut(s) 87, 1661
BsaJI CCNNGG 1 cut(s) 1533
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 517, 878, 1236, 1535
Bse1I ACTGG 3 cut(s) 842, 860, 1342
Bse3DI GCAATG 1 cut(s) 273
BseDI CCNNGG 1 cut(s) 1533
BseGI GGATG 3 cut(s) 1420, 1482, 1720
BseLI CCNNNNNNNGG 5 cut(s) 15, 517, 878, 1236, 1535
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 4 cut(s) 337, 350, 1611, 1647
BseNI ACTGG 3 cut(s) 842, 860, 1342
BseRI GAGGAG 5 cut(s) 173, 178, 303, 449, 452
BseSI GKGCMC 1 cut(s) 647
BseXI GCAGC 2 cut(s) 165, 581
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 2 cut(s) 476, 618
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 2 cut(s) 1594, 1609
BshNI GGYRCC 1 cut(s) 1255
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 444, 647
BsiSI CCGG 1 cut(s) 650
BsiWI CGTACG 1 cut(s) 492
BslFI GGGAC 1 cut(s) 1252
BslI CCNNNNNNNGG 5 cut(s) 15, 517, 878, 1236, 1535
BsmAI GTCTC 6 cut(s) 94, 300, 326, 525, 1622, 1652
BsmBI CGTCTC 2 cut(s) 94, 1652
BsmFI GGGAC 1 cut(s) 1252
BsmI GAATGC 1 cut(s) 274
BsnI GGCC 2 cut(s) 1594, 1609
Bsp1286I GDGCHC 2 cut(s) 444, 647
Bsp143I GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
Bsp19I CCATGG 1 cut(s) 1533
Bsp68I TCGCGA 1 cut(s) 618
BspACI CCGC 4 cut(s) 136, 474, 485, 923
BspANI GGCC 2 cut(s) 1594, 1609
BspCNI CTCAG 4 cut(s) 336, 349, 1612, 1648
BspFNI CGCG 2 cut(s) 476, 618
BspHI TCATGA 1 cut(s) 1018
BspLI GGNNCC 4 cut(s) 7, 256, 1240, 1257
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 3 cut(s) 13, 1212, 1433
BspT107I GGYRCC 1 cut(s) 1255
BspTI CTTAAG 2 cut(s) 526, 973
BsrDI GCAATG 1 cut(s) 273
BsrI ACTGG 3 cut(s) 842, 860, 1342
BssECI CCNNGG 1 cut(s) 1533
BssMI GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
BssNI GRCGYC 2 cut(s) 87, 1661
BssT1I CCWWGG 1 cut(s) 1533
Bst4CI ACNGT 6 cut(s) 49, 311, 356, 405, 689, 1118
Bst6I CTCTTC 3 cut(s) 244, 881, 1340
BstACI GRCGYC 2 cut(s) 87, 1661
BstAFI CTTAAG 2 cut(s) 526, 973
BstAPI GCANNNNNTGC 3 cut(s) 578, 605, 678
BstC8I GCNNGC 3 cut(s) 489, 647, 1132
BstDEI CTNAG 6 cut(s) 323, 336, 743, 873, 1620, 1656
BstDSI CCRYGG 1 cut(s) 1533
BstENI CCTNNNNNAGG 1 cut(s) 876
BstF5I GGATG 3 cut(s) 1420, 1482, 1720
BstFNI CGCG 2 cut(s) 476, 618
BstH2I RGCGCY 1 cut(s) 1282
BstHHI GCGC 2 cut(s) 640, 1281
BstKTI GATC 8 cut(s) 8, 295, 616, 1053, 1123, 1207, 1441, 1466
BstMAI GTCTC 6 cut(s) 94, 300, 326, 525, 1622, 1652
BstMBI GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 4 cut(s) 578, 605, 646, 678
BstNSI RCATGY 3 cut(s) 581, 638, 1044
BstSFI CTRYAG 1 cut(s) 310
BstSLI GKGCMC 1 cut(s) 647
BstUI CGCG 2 cut(s) 476, 618
BstV1I GCAGC 2 cut(s) 165, 581
BstV2I GAAGAC 2 cut(s) 1067, 1383
BstX2I RGATCY 4 cut(s) 5, 292, 1438, 1463
BstXI CCANNNNNNTGG 1 cut(s) 1605
BstYI RGATCY 4 cut(s) 5, 292, 1438, 1463
BsuI GTATCC 1 cut(s) 1241
BsuRI GGCC 2 cut(s) 1594, 1609
BtgI CCRYGG 1 cut(s) 1533
BtsCI GGATG 3 cut(s) 1420, 1482, 1720
BtsI GCAGTG 2 cut(s) 647, 724
BtsIMutI CAGTG 3 cut(s) 647, 724, 1617
BtuMI TCGCGA 1 cut(s) 618
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 3 cut(s) 489, 647, 1132
CciI TCATGA 1 cut(s) 1018
CfoI GCGC 2 cut(s) 640, 1281
Cfr13I GGNCC 1 cut(s) 1239
Csp6I GTAC 8 cut(s) 50, 401, 406, 493, 772, 863, 1353, 1718
CspCI CAANNNNNGTGG 2 cut(s) 1330, 1365
CviQI GTAC 8 cut(s) 50, 401, 406, 493, 772, 863, 1353, 1718
DdeI CTNAG 6 cut(s) 323, 336, 743, 873, 1620, 1656
DpnI GATC 8 cut(s) 7, 294, 615, 1052, 1122, 1206, 1440, 1465
DpnII GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
DrdI GACNNNNNNGTC 1 cut(s) 1636
DseDI GACNNNNNNGTC 1 cut(s) 1636
Eam1104I CTCTTC 3 cut(s) 244, 881, 1340
EarI CTCTTC 3 cut(s) 244, 881, 1340
Eco130I CCWWGG 1 cut(s) 1533
Eco47I GGWCC 1 cut(s) 1239
Eco57I CTGAAG 1 cut(s) 528
EcoNI CCTNNNNNAGG 1 cut(s) 876
EcoO109I RGGNCCY 1 cut(s) 1239
EcoT14I CCWWGG 1 cut(s) 1533
EcoT22I ATGCAT 2 cut(s) 968, 1484
ErhI CCWWGG 1 cut(s) 1533
Esp3I CGTCTC 2 cut(s) 94, 1652
FalI AAGNNNNNCTT 2 cut(s) 1381, 1413
FaqI GGGAC 1 cut(s) 1252
FauI CCCGC 2 cut(s) 143, 492
FauNDI CATATG 1 cut(s) 962
Fnu4HI GCNGC 2 cut(s) 154, 570
FokI GGATG 3 cut(s) 1427, 1469, 1707
Fsp4HI GCNGC 2 cut(s) 154, 570
FspBI CTAG 2 cut(s) 462, 1729
FspI TGCGCA 1 cut(s) 639
GlaI GCGC 2 cut(s) 639, 1280
GluI GCNGC 2 cut(s) 154, 570
GsuI CTGGAG 6 cut(s) 139, 579, 813, 819, 825, 843
HaeII RGCGCY 1 cut(s) 1282
HaeIII GGCC 2 cut(s) 1594, 1609
HapII CCGG 1 cut(s) 650
HhaI GCGC 2 cut(s) 640, 1281
Hin1I GRCGYC 2 cut(s) 87, 1661
Hin6I GCGC 2 cut(s) 638, 1279
HinP1I GCGC 2 cut(s) 638, 1279
HincII GTYRAC 1 cut(s) 1449
HindII GTYRAC 1 cut(s) 1449
HinfI GANTC 9 cut(s) 131, 329, 340, 551, 800, 978, 1094, 1622, 1644
HpaI GTTAAC 1 cut(s) 1449
HpaII CCGG 1 cut(s) 650
HphI GGTGA 3 cut(s) 560, 1106, 1379
Hpy166II GTNNAC 3 cut(s) 52, 645, 1449
Hpy8I GTNNAC 3 cut(s) 52, 645, 1449
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 2 cut(s) 1052, 1596
HpyCH4III ACNGT 6 cut(s) 49, 311, 356, 405, 689, 1118
HpyCH4IV ACGT 2 cut(s) 87, 1661
HpyF10VI GCNNNNNNNGC 4 cut(s) 578, 605, 646, 678
HpyF3I CTNAG 6 cut(s) 323, 336, 743, 873, 1620, 1656
HpySE526I ACGT 2 cut(s) 87, 1661
Hsp92I GRCGYC 2 cut(s) 87, 1661
HspAI GCGC 2 cut(s) 638, 1279
KspAI GTTAAC 1 cut(s) 1449
Kzo9I GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
LmnI GCTCC 7 cut(s) 120, 260, 439, 598, 832, 838, 844
Lsp1109I GCAGC 2 cut(s) 165, 581
LweI GCATC 6 cut(s) 165, 595, 702, 936, 1469, 1491
MaeI CTAG 2 cut(s) 462, 1729
MaeII ACGT 2 cut(s) 87, 1661
MaeIII GTNAC 4 cut(s) 844, 890, 940, 1043
MalI GATC 8 cut(s) 7, 294, 615, 1052, 1122, 1206, 1440, 1465
MboI GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
MboII GAAGA 9 cut(s) 22, 25, 231, 898, 1067, 1103, 1163, 1357, 1388
MfeI CAATTG 2 cut(s) 667, 918
MflI RGATCY 4 cut(s) 5, 292, 1438, 1463
MhlI GDGCHC 2 cut(s) 444, 647
MlyI GAGTC 3 cut(s) 323, 987, 1631
MmeI TCCRAC 3 cut(s) 222, 282, 498
Mph1103I ATGCAT 2 cut(s) 968, 1484
MroXI GAANNNNTTC 1 cut(s) 355
MspCI CTTAAG 2 cut(s) 526, 973
MspI CCGG 1 cut(s) 650
MunI CAATTG 2 cut(s) 667, 918
Mva1269I GAATGC 1 cut(s) 274
MvnI CGCG 2 cut(s) 476, 618
MwoI GCNNNNNNNGC 4 cut(s) 578, 605, 646, 678
NcoI CCATGG 1 cut(s) 1533
NdeI CATATG 1 cut(s) 962
NdeII GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
NlaIV GGNNCC 4 cut(s) 7, 256, 1240, 1257
NmuCI GTSAC 1 cut(s) 940
NruI TCGCGA 1 cut(s) 618
NsbI TGCGCA 1 cut(s) 639
NsiI ATGCAT 2 cut(s) 968, 1484
NspI RCATGY 3 cut(s) 581, 638, 1044
PagI TCATGA 1 cut(s) 1018
PaqCI CACCTGC 1 cut(s) 490
PciI ACATGT 1 cut(s) 1040
PctI GAATGC 1 cut(s) 274
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 6 cut(s) 131, 340, 551, 800, 1094, 1644
Pfl23II CGTACG 1 cut(s) 492
PflFI GACNNNGTC 1 cut(s) 662
PkrI GCNGC 2 cut(s) 155, 571
Ple19I CGATCG 1 cut(s) 616
PleI GAGTC 3 cut(s) 323, 986, 1630
PpsI GAGTC 3 cut(s) 323, 986, 1630
PpuMI RGGWCCY 1 cut(s) 1239
PscI ACATGT 1 cut(s) 1040
PsiI TTATAA 1 cut(s) 1614
Psp5II RGGWCCY 1 cut(s) 1239
PspLI CGTACG 1 cut(s) 492
PspN4I GGNNCC 4 cut(s) 7, 256, 1240, 1257
PspPI GGNCC 1 cut(s) 1239
PspPPI RGGWCCY 1 cut(s) 1239
PsuI RGATCY 4 cut(s) 5, 292, 1438, 1463
PsyI GACNNNGTC 1 cut(s) 662
PvuI CGATCG 1 cut(s) 616
RruI TCGCGA 1 cut(s) 618
RsaI GTAC 8 cut(s) 51, 402, 407, 494, 773, 864, 1354, 1719
RsaNI GTAC 8 cut(s) 50, 401, 406, 493, 772, 863, 1353, 1718
SatI GCNGC 2 cut(s) 154, 570
Sau3AI GATC 8 cut(s) 5, 292, 613, 1050, 1120, 1204, 1438, 1463
Sau96I GGNCC 1 cut(s) 1239
SchI GAGTC 3 cut(s) 323, 987, 1631
SduI GDGCHC 2 cut(s) 444, 647
SfaNI GCATC 6 cut(s) 165, 595, 702, 936, 1469, 1491
SfcI CTRYAG 1 cut(s) 310
SinI GGWCC 1 cut(s) 1239
SmlI CTYRAG 5 cut(s) 411, 526, 973, 1212, 1459
SmoI CTYRAG 5 cut(s) 411, 526, 973, 1212, 1459
SsiI CCGC 4 cut(s) 136, 474, 485, 923
SspI AATATT 2 cut(s) 423, 814
SspMI CTAG 2 cut(s) 462, 1729
StyI CCWWGG 1 cut(s) 1533
TaaI ACNGT 6 cut(s) 49, 311, 356, 405, 689, 1118
TaiI ACGT 2 cut(s) 90, 1664
TaqI TCGA 5 cut(s) 101, 556, 1099, 1105, 1580
TatI WGTACW 2 cut(s) 771, 1717
TfiI GAWTC 6 cut(s) 131, 340, 551, 800, 1094, 1644
TscAI CASTG 3 cut(s) 647, 724, 1624
TseFI GTSAC 1 cut(s) 940
TseI GCWGC 2 cut(s) 153, 569
Tsp45I GTSAC 1 cut(s) 940
TspDTI ATGAA 6 cut(s) 348, 1035, 1104, 1164, 1172, 1389
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 3 cut(s) 647, 724, 1624
Tth111I GACNNNGTC 1 cut(s) 662
Vha464I CTTAAG 2 cut(s) 526, 973
VneI GTGCAC 1 cut(s) 643
VpaK11BI GGWCC 1 cut(s) 1239
XagI CCTNNNNNAGG 1 cut(s) 876
XapI RAATTY 1 cut(s) 1513
XceI RCATGY 3 cut(s) 581, 638, 1044
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 2 cut(s) 462, 1729
ZraI GACGTC 2 cut(s) 88, 1662
Zsp2I ATGCAT 2 cut(s) 968, 1484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.