Rroxscaffold_7G00169080

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
9783876 .. 9786255
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169080.1

Sequence Viewer

Length: 1623 bp
ATGTTGCGCTACTCGAATGAATCATTATATGGCATCGTGACAACAGACCCTGCTGTGTTTCTGTCCAACACACAAAACGTTTCGTCACCGGATGAGTTCAATCGGCAGCTGAAGTTGTTATTGGAAGGACTAATTACTAAAGCTGCAGCAGGAGGTACTGATAGGAAGTTTTCACTGGGCACAAACACAACCGCCAGCTTTGTAACAATATACGGACTTGCACAGTGTACTCCAGATTTGTCGCTGGAAGAATGCACTCAATGCTTAAATGCAGCGTTGGCACAAATCCCACTATATAGTTATGGGAAGATTGGTGGGAATGCTGTTGCACCAAGTTGTATCTTAAGGTATGAAGAATACAACTTCTTTTACCCCGCGGCTGATGCACCCGCTCCATCGCCACAATTAGAAACACCAGTCTCTCCTCCTCCACCACAACCGTCAGGAAAGAAGAAGAACAATACATCTCGGAACATCATCATTGCGGTGACAATTGTTGTTTCTCTGGCACTGATTGCATTGGCAATTTGGATTTATCTGAGATTTTGGAAGACAAAGAAACCACTTGAAGAAGCAGATGATATTATGAGCGCAGAAGCCTTGCAATATGAGTTTGATTCTATTAGAGTTGCTACAAATAACTTTTCTGAAGCAAATAAGCTTGGACGAGGCGGATTTGGTGTTGTTTATAGGGGAAGGCTTTGGAATGAAGAGGAGATAGCAGTGAAAAGGCTCTCCAGAGATTCTACACAAGGAGATATAGAATTTAAAAATGAGGTGGTGCTAGTAGCAAAGCTTCAACATCGAAATTTAGTTAGGCTCCTTGGTTTCTGTCTGGAGAGAAATGAAACACTTCTTGTCTATGAGTTTGTCCCAAATGCAAGTCTTGATCACTTCGTATTTGATCCAATCAAACGTGAACAGTTGGATTGGGATATTCGCTACAAGATCATAGTAGGCATTGGGCGAGGACTCCTTTACCTTCATGAAGACTCTCGTCTTAGAATTATCCATCGTGATCTCAAAGCAAGTAACATTTTATTAGATGCAGAAATGGACCCCAAAATTGCAGATTTTGGCATGGCAAAATTATTTAATATCGATCAAACACAAGGCGAAACCAGTCGAGTTGTGGGAACGTACGGATATATGGCTCCTGAGTATGTAATGCGCGGACATTTTTCTGTGAAGTCCGATGTCTATAGCTTTGGTGTGTTGGTTTTGGAGATAGTAAGCGGACAGAAAAATAGCTCTTTTCATCATGAAGGAAATTTGGAGGATCTTCTAGGCTATGCATGGAATAGTTGGAAGGAGGGGACATCTTCAAATTTGATAGATCCCATGTTGAGGACTGGTTCGAGGTCTGAAATAGTGAGATGCATCCATATTGGATTGTTATGTGTTCAACAAAGCATAGGTGATAGACCAACCATGGCTGCAGTCATTCAAATGCTTACCAGCAACTCTGATGATCTCCCAGTACCCTCACAACCAGCATTTTATATGTATAATCAAGGCATTGGATCCTCATCCGACATGTCATTGGGAATTGAGAGTTACTCAGGATTGACATGGTCTGATCAATCCAAATTAAGCGACTCTGCCAACAAAACCTATACTTGA

Protein Analysis

540

Amino Acids

60.12

Weight (kDa)

5.47

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 25 - 120 1.7e-11 Salt stress response/antifungal
Pkinase PF00069 216 - 419 3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 218 - 483 9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 392
AccII CGCG 2 cut(s) 377, 1173
AciI CCGC 8 cut(s) 192, 375, 377, 390, 485, 672, 1173, 1236
AclI AACGTT 1 cut(s) 78
AclWI GGATC 5 cut(s) 899, 1287, 1331, 1518, 1531
AcsI RAATTY 4 cut(s) 764, 808, 1270, 1327
AcuI CTGAAG 2 cut(s) 131, 669
AfaI GTAC 4 cut(s) 157, 229, 1142, 1482
AfiI CCNNNNNNNGG 1 cut(s) 1347
AflII CTTAAG 1 cut(s) 343
AflIII ACRYGT 1 cut(s) 1536
AgsI TTSAA 6 cut(s) 100, 569, 800, 1326, 1406, 1448
AjuI GAANNNNNNNTTGG 2 cut(s) 104, 136
AluBI AGCT 7 cut(s) 109, 143, 198, 661, 796, 1206, 1251
AluI AGCT 7 cut(s) 109, 143, 198, 661, 796, 1206, 1251
Alw26I GTCTC 1 cut(s) 424
AlwI GGATC 5 cut(s) 899, 1287, 1331, 1518, 1531
AlwNI CAGNNNCTG 1 cut(s) 50
ApeKI GCWGC 5 cut(s) 106, 143, 146, 272, 1436
ApoI RAATTY 4 cut(s) 764, 808, 1270, 1327
Asp700I GAANNNNTTC 1 cut(s) 852
AspLEI GCGC 3 cut(s) 9, 593, 1173
AspS9I GGNCC 1 cut(s) 1057
AsuHPI GGTGA 3 cut(s) 78, 499, 1430
AvaII GGWCC 1 cut(s) 1057
BaeGI GKGCMC 1 cut(s) 182
BamHI GGATCC 1 cut(s) 1523
BarI GAAGNNNNNNTAC 2 cut(s) 780, 812
BbsI GAAGAC 2 cut(s) 557, 996
BbvI GCAGC 5 cut(s) 118, 130, 158, 284, 1423
BccI CCATC 2 cut(s) 403, 1020
BclI TGATCA 2 cut(s) 889, 1579
BcoDI GTCTC 1 cut(s) 424
BfaI CTAG 2 cut(s) 785, 1286
BfmI CTRYAG 3 cut(s) 144, 1201, 1437
BfrI CTTAAG 1 cut(s) 343
BisI GCNGC 6 cut(s) 107, 144, 147, 273, 378, 1437
BlsI GCNGC 6 cut(s) 108, 145, 148, 274, 379, 1438
Bme18I GGWCC 1 cut(s) 1057
BmgT120I GGNCC 1 cut(s) 1057
BmiI GGNNCC 4 cut(s) 821, 1059, 1155, 1525
BmrI ACTGGG 2 cut(s) 185, 1472
BmsI GCATC 5 cut(s) 42, 373, 1036, 1367, 1389
BmuI ACTGGG 2 cut(s) 185, 1472
BoxI GACNNNNGTC 1 cut(s) 996
BpiI GAAGAC 2 cut(s) 557, 996
BplI GAGNNNNNCTC 2 cut(s) 1544, 1576
BpmI CTGGAG 3 cut(s) 216, 721, 857
Bsa29I ATCGAT 1 cut(s) 1101
BsaBI GATNNNNATC 1 cut(s) 1528
BsaJI CCNNGG 3 cut(s) 375, 823, 1431
BsaWI WCCGGW 1 cut(s) 88
Bsc4I CCNNNNNNNGG 1 cut(s) 1347
Bse1I ACTGG 5 cut(s) 180, 416, 1122, 1357, 1478
Bse3DI GCAATG 1 cut(s) 480
Bse8I GATNNNNATC 1 cut(s) 1528
BseCI ATCGAT 1 cut(s) 1101
BseDI CCNNGG 3 cut(s) 375, 823, 1431
BseGI GGATG 3 cut(s) 97, 1380, 1529
BseJI GATNNNNATC 1 cut(s) 1528
BseLI CCNNNNNNNGG 1 cut(s) 1347
BseMI GCAATG 1 cut(s) 480
BseMII CTCAG 3 cut(s) 530, 1149, 1575
BseNI ACTGG 5 cut(s) 180, 416, 1122, 1357, 1478
BseRI GAGGAG 3 cut(s) 414, 417, 728
BseSI GKGCMC 1 cut(s) 182
BseXI GCAGC 5 cut(s) 118, 130, 158, 284, 1423
Bsh1236I CGCG 2 cut(s) 377, 1173
BshVI ATCGAT 1 cut(s) 1101
BsiSI CCGG 1 cut(s) 89
BsiWI CGTACG 1 cut(s) 1140
BslFI GGGAC 2 cut(s) 857, 1330
BslI CCNNNNNNNGG 1 cut(s) 1347
BsmAI GTCTC 1 cut(s) 424
BsmFI GGGAC 2 cut(s) 857, 1330
BsmI GAATGC 2 cut(s) 257, 325
Bsp1286I GDGCHC 1 cut(s) 182
Bsp19I CCATGG 1 cut(s) 1431
BspACI CCGC 8 cut(s) 192, 375, 377, 390, 485, 672, 1173, 1236
BspCNI CTCAG 3 cut(s) 531, 1150, 1574
BspDI ATCGAT 1 cut(s) 1101
BspFNI CGCG 2 cut(s) 377, 1173
BspHI TCATGA 2 cut(s) 985, 1261
BspLI GGNNCC 4 cut(s) 821, 1059, 1155, 1525
BspMAI CTGCAG 2 cut(s) 148, 1441
BspPI GGATC 5 cut(s) 899, 1287, 1331, 1518, 1531
BspTI CTTAAG 1 cut(s) 343
BsrBI CCGCTC 1 cut(s) 392
BsrDI GCAATG 1 cut(s) 480
BsrI ACTGG 5 cut(s) 180, 416, 1122, 1357, 1478
BssECI CCNNGG 3 cut(s) 375, 823, 1431
BssT1I CCWWGG 2 cut(s) 823, 1431
Bst4CI ACNGT 3 cut(s) 225, 441, 924
Bst6I CTCTTC 1 cut(s) 705
BstAFI CTTAAG 1 cut(s) 343
BstAPI GCANNNNNTGC 2 cut(s) 261, 515
BstC8I GCNNGC 1 cut(s) 196
BstDEI CTNAG 4 cut(s) 539, 1001, 1158, 1561
BstDSI CCRYGG 2 cut(s) 375, 1431
BstF5I GGATG 3 cut(s) 97, 1380, 1529
BstFNI CGCG 2 cut(s) 377, 1173
BstHHI GCGC 3 cut(s) 9, 593, 1173
BstMAI GTCTC 1 cut(s) 424
BstMWI GCNNNNNNNGC 4 cut(s) 261, 278, 383, 515
BstNSI RCATGY 1 cut(s) 1540
BstPAI GACNNNNGTC 1 cut(s) 996
BstSFI CTRYAG 3 cut(s) 144, 1201, 1437
BstSLI GKGCMC 1 cut(s) 182
BstUI CGCG 2 cut(s) 377, 1173
BstV1I GCAGC 5 cut(s) 118, 130, 158, 284, 1423
BstV2I GAAGAC 2 cut(s) 557, 996
BstX2I RGATCY 3 cut(s) 1279, 1336, 1523
BstYI RGATCY 3 cut(s) 1279, 1336, 1523
Bsu15I ATCGAT 1 cut(s) 1101
BsuTUI ATCGAT 1 cut(s) 1101
BtgI CCRYGG 2 cut(s) 375, 1431
BtgZI GCGATG 1 cut(s) 381
BtsCI GGATG 3 cut(s) 97, 1380, 1529
BtsI GCAGTG 1 cut(s) 729
BtsIMutI CAGTG 4 cut(s) 173, 230, 509, 729
Cac8I GCNNGC 1 cut(s) 196
CaiI CAGNNNCTG 1 cut(s) 50
CciI TCATGA 2 cut(s) 985, 1261
CfoI GCGC 3 cut(s) 9, 593, 1173
Cfr13I GGNCC 1 cut(s) 1057
Cfr42I CCGCGG 1 cut(s) 378
ClaI ATCGAT 1 cut(s) 1101
Csp6I GTAC 4 cut(s) 156, 228, 1141, 1481
CviAII CATG 8 cut(s) 986, 1081, 1262, 1296, 1342, 1432, 1537, 1572
CviQI GTAC 4 cut(s) 156, 228, 1141, 1481
DdeI CTNAG 4 cut(s) 539, 1001, 1158, 1561
DraI TTTAAA 1 cut(s) 769
Eam1104I CTCTTC 1 cut(s) 705
EarI CTCTTC 1 cut(s) 705
EciI GGCGGA 1 cut(s) 687
Eco130I CCWWGG 2 cut(s) 823, 1431
Eco47I GGWCC 1 cut(s) 1057
Eco57I CTGAAG 2 cut(s) 131, 669
EcoT14I CCWWGG 2 cut(s) 823, 1431
EcoT22I ATGCAT 2 cut(s) 1297, 1382
ErhI CCWWGG 2 cut(s) 823, 1431
FaeI CATG 8 cut(s) 989, 1084, 1265, 1299, 1345, 1435, 1540, 1575
FaqI GGGAC 2 cut(s) 857, 1330
FatI CATG 8 cut(s) 985, 1080, 1261, 1295, 1341, 1431, 1536, 1571
FauI CCCGC 2 cut(s) 382, 397
FbaI TGATCA 2 cut(s) 889, 1579
Fnu4HI GCNGC 6 cut(s) 107, 144, 147, 273, 378, 1437
FokI GGATG 3 cut(s) 104, 1367, 1516
Fsp4HI GCNGC 6 cut(s) 107, 144, 147, 273, 378, 1437
FspBI CTAG 2 cut(s) 785, 1286
GlaI GCGC 3 cut(s) 8, 592, 1172
GluI GCNGC 6 cut(s) 107, 144, 147, 273, 378, 1437
GsuI CTGGAG 3 cut(s) 216, 721, 857
HapII CCGG 1 cut(s) 89
HhaI GCGC 3 cut(s) 9, 593, 1173
Hin1II CATG 8 cut(s) 989, 1084, 1265, 1299, 1345, 1435, 1540, 1575
Hin6I GCGC 3 cut(s) 7, 591, 1171
HinP1I GCGC 3 cut(s) 7, 591, 1171
HindIII AAGCTT 2 cut(s) 659, 794
HinfI GANTC 6 cut(s) 20, 617, 743, 972, 992, 1598
HpaII CCGG 1 cut(s) 89
HphI GGTGA 3 cut(s) 78, 499, 1430
Hpy166II GTNNAC 2 cut(s) 228, 920
Hpy188I TCNGA 8 cut(s) 471, 540, 649, 1195, 1366, 1468, 1534, 1579
Hpy8I GTNNAC 2 cut(s) 228, 920
HpyAV CCTTC 5 cut(s) 119, 690, 992, 1259, 1303
HpyCH4III ACNGT 3 cut(s) 225, 441, 924
HpyCH4IV ACGT 3 cut(s) 78, 916, 1139
HpyF10VI GCNNNNNNNGC 4 cut(s) 261, 278, 383, 515
HpyF3I CTNAG 4 cut(s) 539, 1001, 1158, 1561
HpySE526I ACGT 3 cut(s) 78, 916, 1139
Hsp92II CATG 8 cut(s) 989, 1084, 1265, 1299, 1345, 1435, 1540, 1575
HspAI GCGC 3 cut(s) 7, 591, 1171
Ksp22I TGATCA 2 cut(s) 889, 1579
KspI CCGCGG 1 cut(s) 378
LmnI GCTCC 3 cut(s) 397, 825, 1159
Lsp1109I GCAGC 5 cut(s) 118, 130, 158, 284, 1423
LweI GCATC 5 cut(s) 42, 373, 1036, 1367, 1389
MaeI CTAG 2 cut(s) 785, 1286
MaeII ACGT 3 cut(s) 78, 916, 1139
MaeIII GTNAC 6 cut(s) 37, 84, 202, 487, 1031, 1556
MbiI CCGCTC 1 cut(s) 392
MfeI CAATTG 1 cut(s) 492
MflI RGATCY 3 cut(s) 1279, 1336, 1523
MhlI GDGCHC 1 cut(s) 182
MlyI GAGTC 3 cut(s) 966, 986, 1592
MmeI TCCRAC 4 cut(s) 90, 906, 1286, 1557
Mph1103I ATGCAT 2 cut(s) 1297, 1382
MroXI GAANNNNTTC 1 cut(s) 852
MseI TTAA 5 cut(s) 266, 344, 768, 1095, 1592
MslI CAYNNNNRTG 2 cut(s) 485, 1448
MspA1I CMGCKG 2 cut(s) 109, 377
MspCI CTTAAG 1 cut(s) 343
MspI CCGG 1 cut(s) 89
MunI CAATTG 1 cut(s) 492
Mva1269I GAATGC 2 cut(s) 257, 325
MvnI CGCG 2 cut(s) 377, 1173
MwoI GCNNNNNNNGC 4 cut(s) 261, 278, 383, 515
NcoI CCATGG 1 cut(s) 1431
NlaIII CATG 8 cut(s) 989, 1084, 1265, 1299, 1345, 1435, 1540, 1575
NlaIV GGNNCC 4 cut(s) 821, 1059, 1155, 1525
NmuCI GTSAC 3 cut(s) 37, 84, 487
NsiI ATGCAT 2 cut(s) 1297, 1382
NspI RCATGY 1 cut(s) 1540
PagI TCATGA 2 cut(s) 985, 1261
PciI ACATGT 1 cut(s) 1536
PctI GAATGC 2 cut(s) 257, 325
PdmI GAANNNNTTC 1 cut(s) 852
PfeI GAWTC 3 cut(s) 20, 617, 743
Pfl23II CGTACG 1 cut(s) 1140
PflFI GACNNNGTC 1 cut(s) 1573
PkrI GCNGC 6 cut(s) 108, 145, 148, 274, 379, 1438
PleI GAGTC 3 cut(s) 966, 986, 1592
PpsI GAGTC 3 cut(s) 966, 986, 1592
PscI ACATGT 1 cut(s) 1536
PshAI GACNNNNGTC 1 cut(s) 996
Psp1406I AACGTT 1 cut(s) 78
PspLI CGTACG 1 cut(s) 1140
PspN4I GGNNCC 4 cut(s) 821, 1059, 1155, 1525
PspPI GGNCC 1 cut(s) 1057
PstI CTGCAG 2 cut(s) 148, 1441
PstNI CAGNNNCTG 1 cut(s) 50
PsuI RGATCY 3 cut(s) 1279, 1336, 1523
PsyI GACNNNGTC 1 cut(s) 1573
PvuII CAGCTG 1 cut(s) 109
RsaI GTAC 4 cut(s) 157, 229, 1142, 1482
RsaNI GTAC 4 cut(s) 156, 228, 1141, 1481
RseI CAYNNNNRTG 2 cut(s) 485, 1448
SacII CCGCGG 1 cut(s) 378
SaqAI TTAA 5 cut(s) 266, 344, 768, 1095, 1592
SatI GCNGC 6 cut(s) 107, 144, 147, 273, 378, 1437
Sau96I GGNCC 1 cut(s) 1057
SchI GAGTC 3 cut(s) 966, 986, 1592
SduI GDGCHC 1 cut(s) 182
SfaNI GCATC 5 cut(s) 42, 373, 1036, 1367, 1389
SfcI CTRYAG 3 cut(s) 144, 1201, 1437
Sfr303I CCGCGG 1 cut(s) 378
SgrBI CCGCGG 1 cut(s) 378
SinI GGWCC 1 cut(s) 1057
SmiMI CAYNNNNRTG 2 cut(s) 485, 1448
SmlI CTYRAG 1 cut(s) 343
SmoI CTYRAG 1 cut(s) 343
SsiI CCGC 8 cut(s) 192, 375, 377, 390, 485, 672, 1173, 1236
SspMI CTAG 2 cut(s) 785, 1286
StyI CCWWGG 2 cut(s) 823, 1431
TaaI ACNGT 3 cut(s) 225, 441, 924
TaiI ACGT 3 cut(s) 81, 919, 1142
TaqI TCGA 5 cut(s) 14, 805, 1101, 1126, 1358
TatI WGTACW 1 cut(s) 227
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 3 cut(s) 20, 617, 743
Tru1I TTAA 5 cut(s) 266, 344, 768, 1095, 1592
Tru9I TTAA 5 cut(s) 266, 344, 768, 1095, 1592
TscAI CASTG 4 cut(s) 180, 230, 516, 729
TseFI GTSAC 3 cut(s) 37, 84, 487
TseI GCWGC 5 cut(s) 106, 143, 146, 272, 1436
Tsp45I GTSAC 3 cut(s) 37, 84, 487
TspDTI ATGAA 8 cut(s) 33, 366, 723, 861, 974, 1002, 1247, 1278
TspGWI ACGGA 2 cut(s) 228, 1158
TspRI CASTG 4 cut(s) 180, 230, 516, 729
Tth111I GACNNNGTC 1 cut(s) 1573
Vha464I CTTAAG 1 cut(s) 343
VpaK11BI GGWCC 1 cut(s) 1057
XapI RAATTY 4 cut(s) 764, 808, 1270, 1327
XceI RCATGY 1 cut(s) 1540
XcmI CCANNNNNNNNNTGG 1 cut(s) 1129
XmnI GAANNNNTTC 1 cut(s) 852
XspI CTAG 2 cut(s) 785, 1286
Zsp2I ATGCAT 2 cut(s) 1297, 1382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.