RchiOBHm_Chr6g0299011

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
60239522 .. 60242356
2835 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26846

Sequence Viewer

Length: 2004 bp
ATGGTTTCCCCATCAACCTTTGGGCTCTTCTTGTCAATACAACTTGTATTGCTCCTAGCTCAAGACGATCAGTCACGTTTTATATACTACTTTTGCAGCAAGAACGGTAACTACACCCCCGGTAGCACGTATCAGACAAACCTGAACAATCTTCTCGGTTCTCTTTCCTCCACCGGCAACGATAACGGCAACGGTTTCTACAGTTCCTCTGTTGGAGTAAATTCCGACAAAGTTAATGCATTCGGCCTCTGCAGAGGAGATGTCAAGGCTGGTGATTGCGAAAGTTGCGTCAGCCAAGCTATTGATCCTCTCAAAAGAGCTTGTCCTGTCCAGAAGGAGGCCATTATATGGTACGACTATTGCATGTTACGCTACTCGAATGAATCATTATATGGAATCGTGACAACAGACCCTGCTGTGTTTCTGTACAACACACAAAACGTTTCGTCACCGGATGAGTTCAATCGGCAGCTGAAGTTGTTATTGGAAGGACTAATTACTAAAGCTGCAGCAGGAGGTACTGATAGGAAGTTTGAACTGGGCACAAACACAACCTCCAGCTCTGTAACAATATATGGATCTGCACAGTGTACTCCAGATTTGTCGCTGGAAGAATGCACCCAATGCTTAAATGCAGCGTTGGCAAAAATCCCACTATATAGTTATGGGAAGAAAGGTGGGACTGCTGTTGCACCAAGTTGTATCTTAAGGTATGAAGAATACGACTTCTTTTACCCCGCGCCTGATGCACCCGCTTCGTCGCCACAATTAGAAACACCAGTCTCTCCTCCTCCACCACAACCGCCAGGAAAGAAGAAGAACAATACATCTCGGAACATCATCATTGCGGTGACAATCGTTGTTTCTCTGGCACTGATTGCATTGGCAATTTGGATTTATCTGAGATTTTGGAAGACAAAGAAACCACTTGAAGCAGATGAAATTATGAGCGCAGAAGCCTTGCAATTCGAGTTTGATTCCATTAGAGTTGCTACAAATAACTTTTCTGAAGCAAATAAGCTTGGACGAGGAGGATTTGGTGCTGTTTATAAGGGTAGGCTTTGGAACGAAGAGGAGATAGCAGTTAAAAGGCTCTCCAGAGATTCTGCACAAGGAGATATAGAATTTAAAAATGAGGTGGTGCTAGTGGCAAAGCTTCAACATCGAAATTTAGTTAGGCTCCTTGGTTTCTGTCTGGAGAGAAATGAAAGACTTCTTGTCTATGAGTTTGTCCCAAATGCAAGTCTTGATCATTTCGTATTTGATCCAATCAAGCGTGAACAATTGGATTGGGAAATTCGCTACAAGATTATACTAGGGATTGGGCGAGGACTCCTTTACCTTCATGAAGATTCTCGTCTTAGAATTATCCATCGTGATCTCAAAGCAAGTAATATTTTATTAGATGCAGAAATGAACCCCAAAATTGCAGATTTTGGTATGGCAAGATTGTTTAATATAGATCAAACACAAGGCGAAACCAGTCGAGTTGTGGGAACTTATGGATATATGGCTCCTGAGTATGTAATGCGCGGACATTTTTCTGTGAAGTCCGATGTCTATAGCTTTGGTGTGTTGGTTTTGGAGGTAGTAAGCGGACAGAAAAATAGCTCTTTTCGTCATGAAGGAAATTTGGAGGATCTTCTAGGCTATGCATGGAATAGTTGGAAGGGAGGGACATCTTCAAATTTGATAGATCCCATGTTGAGGACTGGTTCGAGGCCTGAAATAGTGAGATGCATCCATATTGGATTGTTATGTGTTCAACAAAGCATAGGTGATAGACCAACCATGGCTGCAGTTATTCAAATGCTTACCAGCAACTCTGTTAATCTCCCAGTACCCTCACAACCAGCATTTTATATGTATAATCAAGGTATTGGATCCTCATCCGACATGTCGTTGGGATTTGAGAGTAGCTCAGGATTGACATGGTCTCACTCTGATCAGTTCAAAAGCAACTCTGCCAACAAACCTATAGTAGAAGCTTCATCTACCCGTTAA

Protein Analysis

667

Amino Acids

73.85

Weight (kDa)

6.16

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 32 - 128 1.1e-26 Salt stress response/antifungal
Stress-antifung PF01657 146 - 241 7.1e-12 Salt stress response/antifungal
Pkinase PF00069 336 - 538 2.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 338 - 603 1.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1050
AccB7I CCANNNNNTGG 1 cut(s) 348
AccII CGCG 2 cut(s) 740, 1533
AciI CCGC 6 cut(s) 738, 753, 803, 848, 1533, 1596
AclI AACGTT 1 cut(s) 441
AclWI GGATC 7 cut(s) 299, 586, 1259, 1647, 1691, 1878, 1891
AcsI RAATTY 6 cut(s) 220, 1124, 1168, 1296, 1630, 1687
AcuI CTGAAG 2 cut(s) 494, 1029
AfaI GTAC 5 cut(s) 353, 428, 520, 592, 1842
AfiI CCNNNNNNNGG 3 cut(s) 337, 348, 1707
AflII CTTAAG 1 cut(s) 706
AflIII ACRYGT 1 cut(s) 1896
AgsI TTSAA 8 cut(s) 463, 536, 932, 1160, 1686, 1766, 1808, 1954
AhdI GACNNNNNGTC 2 cut(s) 70, 1217
AjnI CCWGG 1 cut(s) 805
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
Alw26I GTCTC 2 cut(s) 787, 1941
AlwI GGATC 7 cut(s) 299, 586, 1259, 1647, 1691, 1878, 1891
AlwNI CAGNNNCTG 1 cut(s) 413
AoxI GGCC 3 cut(s) 244, 339, 1721
ApeKI GCWGC 6 cut(s) 96, 469, 506, 509, 635, 1796
ApoI RAATTY 6 cut(s) 220, 1124, 1168, 1296, 1630, 1687
ArsI GACNNNNNNTTYG 2 cut(s) 273, 305
Asp700I GAANNNNTTC 1 cut(s) 1212
AspLEI GCGC 3 cut(s) 742, 953, 1533
AsuC2I CCSGG 1 cut(s) 120
AsuHPI GGTGA 4 cut(s) 284, 441, 862, 1790
BaeGI GKGCMC 1 cut(s) 545
BamHI GGATCC 1 cut(s) 1883
BanII GRGCYC 1 cut(s) 27
BbsI GAAGAC 1 cut(s) 920
BbvI GCAGC 6 cut(s) 108, 481, 493, 521, 647, 1783
BccI CCATC 2 cut(s) 19, 1380
BceAI ACGGC 1 cut(s) 202
BcgI CGANNNNNNTGC 2 cut(s) 738, 772
BciT130I CCWGG 1 cut(s) 807
BclI TGATCA 2 cut(s) 1249, 1945
BcnI CCSGG 1 cut(s) 120
BcoDI GTCTC 2 cut(s) 787, 1941
BfaI CTAG 4 cut(s) 56, 1145, 1316, 1646
BfmI CTRYAG 6 cut(s) 199, 250, 507, 1561, 1797, 1977
BfrI CTTAAG 1 cut(s) 706
BisI GCNGC 6 cut(s) 97, 470, 507, 510, 636, 1797
BlsI GCNGC 6 cut(s) 98, 471, 508, 511, 637, 1798
Bme1390I CCNGG 2 cut(s) 120, 807
BmeRI GACNNNNNGTC 2 cut(s) 70, 1217
BmiI GGNNCC 3 cut(s) 1181, 1515, 1885
BmrFI CCNGG 2 cut(s) 120, 807
BmrI ACTGGG 2 cut(s) 548, 1832
BmsI GCATC 4 cut(s) 736, 1396, 1727, 1749
BmuI ACTGGG 2 cut(s) 548, 1832
BpiI GAAGAC 1 cut(s) 920
BplI GAGNNNNNCTC 2 cut(s) 1904, 1936
BpmI CTGGAG 4 cut(s) 541, 579, 1081, 1217
Bpu10I CCTNAGC 1 cut(s) 1921
BpuEI CTTGAG 1 cut(s) 45
BpuMI CCSGG 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 129
BsaBI GATNNNNATC 1 cut(s) 1888
BsaI GGTCTC 1 cut(s) 1941
BsaJI CCNNGG 3 cut(s) 118, 1183, 1791
BsaWI WCCGGW 1 cut(s) 451
BsaXI ACNNNNNCTCC 2 cut(s) 539, 569
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 348, 1707
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 5 cut(s) 543, 779, 1482, 1717, 1838
Bse3DI GCAATG 1 cut(s) 843
Bse8I GATNNNNATC 1 cut(s) 1888
BseBI CCWGG 1 cut(s) 807
BseDI CCNNGG 3 cut(s) 118, 1183, 1791
BseGI GGATG 3 cut(s) 460, 1740, 1889
BseJI GATNNNNATC 1 cut(s) 1888
BseLI CCNNNNNNNGG 3 cut(s) 337, 348, 1707
BseMI GCAATG 1 cut(s) 843
BseMII CTCAG 3 cut(s) 893, 1509, 1935
BseNI ACTGG 5 cut(s) 543, 779, 1482, 1717, 1838
BseRI GAGGAG 5 cut(s) 270, 777, 780, 1044, 1088
BseSI GKGCMC 1 cut(s) 545
BseXI GCAGC 6 cut(s) 108, 481, 493, 521, 647, 1783
BsgI GTGCAG 2 cut(s) 567, 1092
Bsh1236I CGCG 2 cut(s) 740, 1533
BshFI GGCC 3 cut(s) 246, 341, 1723
BsiSI CCGG 3 cut(s) 120, 174, 452
BslFI GGGAC 3 cut(s) 694, 1217, 1690
BslI CCNNNNNNNGG 3 cut(s) 337, 348, 1707
BsmAI GTCTC 2 cut(s) 787, 1941
BsmFI GGGAC 3 cut(s) 694, 1217, 1690
BsmI GAATGC 2 cut(s) 239, 620
BsnI GGCC 3 cut(s) 246, 341, 1723
Bso31I GGTCTC 1 cut(s) 1941
Bsp1286I GDGCHC 2 cut(s) 27, 545
Bsp1407I TGTACA 1 cut(s) 426
Bsp19I CCATGG 1 cut(s) 1791
BspACI CCGC 6 cut(s) 738, 753, 803, 848, 1533, 1596
BspANI GGCC 3 cut(s) 246, 341, 1723
BspCNI CTCAG 3 cut(s) 894, 1510, 1934
BspFNI CGCG 2 cut(s) 740, 1533
BspHI TCATGA 2 cut(s) 1345, 1621
BspLI GGNNCC 3 cut(s) 1181, 1515, 1885
BspMAI CTGCAG 3 cut(s) 254, 511, 1801
BspPI GGATC 7 cut(s) 299, 586, 1259, 1647, 1691, 1878, 1891
BspQI GCTCTTC 1 cut(s) 32
BspTI CTTAAG 1 cut(s) 706
BspTNI GGTCTC 1 cut(s) 1941
BsrDI GCAATG 1 cut(s) 843
BsrFI RCCGGY 1 cut(s) 173
BsrGI TGTACA 1 cut(s) 426
BsrI ACTGG 5 cut(s) 543, 779, 1482, 1717, 1838
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 3 cut(s) 118, 1183, 1791
BssT1I CCWWGG 2 cut(s) 1183, 1791
Bst2UI CCWGG 1 cut(s) 807
Bst4CI ACNGT 4 cut(s) 107, 194, 203, 588
Bst6I CTCTTC 2 cut(s) 32, 1065
BstAFI CTTAAG 1 cut(s) 706
BstAPI GCANNNNNTGC 2 cut(s) 624, 878
BstAUI TGTACA 1 cut(s) 426
BstBAI YACGTR 1 cut(s) 129
BstDEI CTNAG 4 cut(s) 902, 1361, 1518, 1921
BstDSI CCRYGG 1 cut(s) 1791
BstF5I GGATG 3 cut(s) 460, 1740, 1889
BstFNI CGCG 2 cut(s) 740, 1533
BstHHI GCGC 3 cut(s) 742, 953, 1533
BstMAI GTCTC 2 cut(s) 787, 1941
BstMWI GCNNNNNNNGC 6 cut(s) 285, 369, 624, 641, 746, 878
BstNI CCWGG 1 cut(s) 807
BstNSI RCATGY 2 cut(s) 367, 1900
BstSCI CCNGG 2 cut(s) 118, 805
BstSFI CTRYAG 6 cut(s) 199, 250, 507, 1561, 1797, 1977
BstSLI GKGCMC 1 cut(s) 545
BstUI CGCG 2 cut(s) 740, 1533
BstV1I GCAGC 6 cut(s) 108, 481, 493, 521, 647, 1783
BstV2I GAAGAC 1 cut(s) 920
BstX2I RGATCY 4 cut(s) 578, 1639, 1696, 1883
BstYI RGATCY 4 cut(s) 578, 1639, 1696, 1883
BsuRI GGCC 3 cut(s) 246, 341, 1723
BtgI CCRYGG 1 cut(s) 1791
BtsCI GGATG 3 cut(s) 460, 1740, 1889
BtsIMutI CAGTG 2 cut(s) 593, 872
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 2 cut(s) 1345, 1621
CfoI GCGC 3 cut(s) 742, 953, 1533
Cfr10I RCCGGY 1 cut(s) 173
CseI GACGC 1 cut(s) 277
Csp6I GTAC 5 cut(s) 352, 427, 519, 591, 1841
CviAII CATG 8 cut(s) 364, 1346, 1622, 1656, 1702, 1792, 1897, 1932
CviQI GTAC 5 cut(s) 352, 427, 519, 591, 1841
DdeI CTNAG 4 cut(s) 902, 1361, 1518, 1921
DraI TTTAAA 1 cut(s) 1129
DriI GACNNNNNGTC 2 cut(s) 70, 1217
Eam1104I CTCTTC 2 cut(s) 32, 1065
Eam1105I GACNNNNNGTC 2 cut(s) 70, 1217
EarI CTCTTC 2 cut(s) 32, 1065
Eco130I CCWWGG 2 cut(s) 1183, 1791
Eco147I AGGCCT 1 cut(s) 1723
Eco24I GRGCYC 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 1941
Eco57I CTGAAG 2 cut(s) 494, 1029
EcoRII CCWGG 1 cut(s) 805
EcoT14I CCWWGG 2 cut(s) 1183, 1791
EcoT22I ATGCAT 3 cut(s) 241, 1657, 1742
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 2 cut(s) 1183, 1791
FaeI CATG 8 cut(s) 367, 1349, 1625, 1659, 1705, 1795, 1900, 1935
FaqI GGGAC 3 cut(s) 694, 1217, 1690
FatI CATG 8 cut(s) 363, 1345, 1621, 1655, 1701, 1791, 1896, 1931
FauI CCCGC 2 cut(s) 745, 760
FbaI TGATCA 2 cut(s) 1249, 1945
Fnu4HI GCNGC 6 cut(s) 97, 470, 507, 510, 636, 1797
FokI GGATG 3 cut(s) 467, 1727, 1876
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 6 cut(s) 97, 470, 507, 510, 636, 1797
FspBI CTAG 4 cut(s) 56, 1145, 1316, 1646
GlaI GCGC 3 cut(s) 741, 952, 1532
GluI GCNGC 6 cut(s) 97, 470, 507, 510, 636, 1797
GsuI CTGGAG 4 cut(s) 541, 579, 1081, 1217
HaeIII GGCC 3 cut(s) 246, 341, 1723
HapII CCGG 3 cut(s) 120, 174, 452
HgaI GACGC 1 cut(s) 277
HhaI GCGC 3 cut(s) 742, 953, 1533
Hin1II CATG 8 cut(s) 367, 1349, 1625, 1659, 1705, 1795, 1900, 1935
Hin6I GCGC 3 cut(s) 740, 951, 1531
HinP1I GCGC 3 cut(s) 740, 951, 1531
HindIII AAGCTT 3 cut(s) 1019, 1154, 1986
HinfI GANTC 6 cut(s) 383, 396, 977, 1103, 1332, 1352
HpaII CCGG 3 cut(s) 120, 174, 452
HphI GGTGA 4 cut(s) 284, 441, 862, 1790
Hpy166II GTNNAC 2 cut(s) 591, 1280
Hpy188I TCNGA 8 cut(s) 135, 226, 834, 903, 1009, 1555, 1894, 1945
Hpy8I GTNNAC 2 cut(s) 591, 1280
Hpy99I CGWCG 1 cut(s) 763
HpyAV CCTTC 5 cut(s) 328, 482, 1352, 1619, 1663
HpyCH4III ACNGT 4 cut(s) 107, 194, 203, 588
HpyCH4IV ACGT 3 cut(s) 76, 128, 441
HpyF10VI GCNNNNNNNGC 6 cut(s) 285, 369, 624, 641, 746, 878
HpyF3I CTNAG 4 cut(s) 902, 1361, 1518, 1921
HpySE526I ACGT 3 cut(s) 76, 128, 441
Hsp92II CATG 8 cut(s) 367, 1349, 1625, 1659, 1705, 1795, 1900, 1935
HspAI GCGC 3 cut(s) 740, 951, 1531
Ksp22I TGATCA 2 cut(s) 1249, 1945
LguI GCTCTTC 1 cut(s) 32
LmnI GCTCC 3 cut(s) 57, 1185, 1519
Lsp1109I GCAGC 6 cut(s) 108, 481, 493, 521, 647, 1783
LweI GCATC 4 cut(s) 736, 1396, 1727, 1749
MaeI CTAG 4 cut(s) 56, 1145, 1316, 1646
MaeII ACGT 3 cut(s) 76, 128, 441
MaeIII GTNAC 7 cut(s) 72, 107, 366, 400, 447, 565, 850
MfeI CAATTG 1 cut(s) 1283
MflI RGATCY 4 cut(s) 578, 1639, 1696, 1883
MhlI GDGCHC 2 cut(s) 27, 545
MlyI GAGTC 1 cut(s) 1326
MmeI TCCRAC 4 cut(s) 193, 249, 1646, 1917
Mph1103I ATGCAT 3 cut(s) 241, 1657, 1742
MroXI GAANNNNTTC 1 cut(s) 1212
MseI TTAA 8 cut(s) 234, 629, 707, 1086, 1128, 1455, 1830, 2002
MslI CAYNNNNRTG 1 cut(s) 848
MspA1I CMGCKG 1 cut(s) 472
MspCI CTTAAG 1 cut(s) 706
MspI CCGG 3 cut(s) 120, 174, 452
MspR9I CCNGG 2 cut(s) 120, 807
MunI CAATTG 1 cut(s) 1283
Mva1269I GAATGC 2 cut(s) 239, 620
MvaI CCWGG 1 cut(s) 807
MvnI CGCG 2 cut(s) 740, 1533
MwoI GCNNNNNNNGC 6 cut(s) 285, 369, 624, 641, 746, 878
NciI CCSGG 1 cut(s) 120
NcoI CCATGG 1 cut(s) 1791
NlaIII CATG 8 cut(s) 367, 1349, 1625, 1659, 1705, 1795, 1900, 1935
NlaIV GGNNCC 3 cut(s) 1181, 1515, 1885
NmuCI GTSAC 4 cut(s) 72, 400, 447, 850
NsiI ATGCAT 3 cut(s) 241, 1657, 1742
NspI RCATGY 2 cut(s) 367, 1900
PagI TCATGA 2 cut(s) 1345, 1621
PceI AGGCCT 1 cut(s) 1723
PciI ACATGT 1 cut(s) 1896
PciSI GCTCTTC 1 cut(s) 32
PctI GAATGC 2 cut(s) 239, 620
PdmI GAANNNNTTC 1 cut(s) 1212
PfeI GAWTC 5 cut(s) 383, 396, 977, 1103, 1352
PflFI GACNNNGTC 1 cut(s) 1933
PflMI CCANNNNNTGG 1 cut(s) 348
PkrI GCNGC 6 cut(s) 98, 471, 508, 511, 637, 1798
PleI GAGTC 1 cut(s) 1326
PpsI GAGTC 1 cut(s) 1326
Ppu21I YACGTR 1 cut(s) 129
PscI ACATGT 1 cut(s) 1896
PsiI TTATAA 1 cut(s) 1050
Psp1406I AACGTT 1 cut(s) 441
Psp6I CCWGG 1 cut(s) 805
PspGI CCWGG 1 cut(s) 805
PspN4I GGNNCC 3 cut(s) 1181, 1515, 1885
PsrI GAACNNNNNNTAC 2 cut(s) 95, 127
PstI CTGCAG 3 cut(s) 254, 511, 1801
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 4 cut(s) 578, 1639, 1696, 1883
PsyI GACNNNGTC 1 cut(s) 1933
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 5 cut(s) 353, 428, 520, 592, 1842
RsaNI GTAC 5 cut(s) 352, 427, 519, 591, 1841
RseI CAYNNNNRTG 1 cut(s) 848
SapI GCTCTTC 1 cut(s) 32
SaqAI TTAA 8 cut(s) 234, 629, 707, 1086, 1128, 1455, 1830, 2002
SatI GCNGC 6 cut(s) 97, 470, 507, 510, 636, 1797
SchI GAGTC 1 cut(s) 1326
ScrFI CCNGG 2 cut(s) 120, 807
SduI GDGCHC 2 cut(s) 27, 545
SfaNI GCATC 4 cut(s) 736, 1396, 1727, 1749
SfcI CTRYAG 6 cut(s) 199, 250, 507, 1561, 1797, 1977
SmiMI CAYNNNNRTG 1 cut(s) 848
SmlI CTYRAG 2 cut(s) 60, 706
SmoI CTYRAG 2 cut(s) 60, 706
SseBI AGGCCT 1 cut(s) 1723
SsiI CCGC 6 cut(s) 738, 753, 803, 848, 1533, 1596
SspI AATATT 1 cut(s) 1396
SspMI CTAG 4 cut(s) 56, 1145, 1316, 1646
StuI AGGCCT 1 cut(s) 1723
StyD4I CCNGG 2 cut(s) 118, 805
StyI CCWWGG 2 cut(s) 1183, 1791
TaaI ACNGT 4 cut(s) 107, 194, 203, 588
TaiI ACGT 3 cut(s) 79, 131, 444
TaqI TCGA 5 cut(s) 377, 969, 1165, 1486, 1718
TatI WGTACW 2 cut(s) 426, 590
TfiI GAWTC 5 cut(s) 383, 396, 977, 1103, 1352
Tru1I TTAA 8 cut(s) 234, 629, 707, 1086, 1128, 1455, 1830, 2002
Tru9I TTAA 8 cut(s) 234, 629, 707, 1086, 1128, 1455, 1830, 2002
TscAI CASTG 2 cut(s) 593, 879
TseFI GTSAC 4 cut(s) 72, 400, 447, 850
TseI GCWGC 6 cut(s) 96, 469, 506, 509, 635, 1796
Tsp45I GTSAC 4 cut(s) 72, 400, 447, 850
TspDTI ATGAA 9 cut(s) 396, 729, 954, 1221, 1334, 1362, 1430, 1638, 1980
TspRI CASTG 2 cut(s) 593, 879
Tth111I GACNNNGTC 1 cut(s) 1933
Van91I CCANNNNNTGG 1 cut(s) 348
Vha464I CTTAAG 1 cut(s) 706
XapI RAATTY 6 cut(s) 220, 1124, 1168, 1296, 1630, 1687
XceI RCATGY 2 cut(s) 367, 1900
XcmI CCANNNNNNNNNTGG 1 cut(s) 1489
XmnI GAANNNNTTC 1 cut(s) 1212
XspI CTAG 4 cut(s) 56, 1145, 1316, 1646
Zsp2I ATGCAT 3 cut(s) 241, 1657, 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.