Rroxscaffold_4G00328370

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
61377898 .. 61384099
6202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328370.1

Sequence Viewer

Length: 1749 bp
ATGGTACGCTACTCCAACCGCTCCTTTCATCTTGAGCTTTCTCCTAGTTACAATCAATCGACCACGAGAAACCTATCGTCGTCGGATGTCGATTCATTAATCAATGGTGAGCTGGAGAAGTTAATCAGAGGAATGAAATATCAAGCAGCTGCAGGTGGTCTTCAAAAAAAGTTTGCAACGGAAACGAGAAGGGTTAGGTATTCCAACAATCAATCAATATTTGGAAAAGTACAGTGCATTCCGGACTTGTCGGAGGAAGAGTGCCGTGTCTGCTTGGATGAGGGTCTGAGACAGCTTCAGAAATGTTGTTATGGGATGGATTCTGCGACATTTGGTAATCCGAGCTGTAATTTGATGTATGAAGTTTTCACCTCCGATGATCCAGCTAAATATGGTGAACCACGAGCACTATCTCATCCTCCTCCGCCATCAGATAAAAATTCAGGAGGAAATAAGAAGAGCAGCACATCTGCCGGGACCGTCATCATTATTGCTTTGGCAACGGTTGTTTCCTTCTTGATTCTAATTATGTCCATCTGCATCTATCTGAGAGTGAAGTATAAAAGGAAAAGAATTGAAGAAAGAGCAGAAGAAATCAAATCTGCAGAAGCTTTGCAATTCGACTTTCGCTCCATTAGAGCTGCCACAAATAACTTTTCGGAAGCAAATAAACTTGGACGGGGAGGATTTGGTATTGTCTACAGGGGTATACTTCCCGATGATAAGGACATAGCGGTTAAAAGGCTTTCGAGGGATTCTGCACAAGGAGATTTAGAATTCAAAACTGAGGTCTCGCTAGTGGCCAGGCTTCAACATAGGAATTTGGTTAGGCTTCTTGGTTTCTGCCTGGGAAAACATGAAAAGATACTTGTTTATGAGTTTGTCCCTAACGGAAGTCTTGATCAATTCATATTTGGTGAAGTCAAGCACGCACTTTTGGATTGGGATGTTCGCTACAAAATCATAGTAGGCATTGCGAGAGGGCTCCTTTACCTTCATGAAGATTCTCGTCTTAAAATCATTCACCGTGATCTCAAAGCTAGCAACATTCTATTAGATGCGGACATGAACCCCAAAGTTGCAGATTTTGGTATGGCGAGATTGTTTGATCTTGATCAATCACAAGGCGAAACCAGACGAGTTGTGGGAACTTACGGATATATGGCTCCAGAGTATGTGATGCGTGGACAATTTTCGGTTAAGTCTGATGTCTTTAGCTTTGGTGTCCTAGTTTTGGAGATGGTAAGTGGACAAAAGAATAGTTCTTTTCGTAATAGAGGAAATGTGGAGTATCTTCTAAGCTATGTAAGTATAATAGAAACTTGTACTTCTATGTTTCTCTACGAACTAATAACTGTATTAGATGCAACTAGAGAAAGAAAAAGTATTCAGAGCCTAATTTGTTTATGTAATTTCCAATTCATTCAGGCATGGAAAAATTGGAGAGCAGATACGGCTTCAAATATAATAGATCCCATCTTGAGTTCTGGTTCAAGAACTGAGATGATGAGATGCATCAACATTGGATTGTTATGTGTGCAACAAAATATAGCTGATAGGCCAACTATGACTTCAGTTATTCTCATGCTCACTGGCAACTCTCTCACTCTTCCAGTACCCTCACAGCCAGCATTTTTTATGGGTGCATCCGACTTTTCAAAGGTTGTAGAATTGGATCAAGCTCAAAGCAGCAGTTCTGTCCAAAAATCTGTTAATGAGGCTTCAATTACTGAACTATCACCTCGCTAA

Protein Analysis

582

Amino Acids

65.25

Weight (kDa)

8.64

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 38 - 121 1.3e-07 Salt stress response/antifungal
Pkinase PF00069 220 - 425 1.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 222 - 419 2.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 143
Acc36I ACCTGC 1 cut(s) 143
AccBSI CCGCTC 1 cut(s) 21
AccI GTMKAC 2 cut(s) 699, 709
AccIII TCCGGA 1 cut(s) 241
AciI CCGC 4 cut(s) 19, 425, 734, 1061
AclWI GGATC 3 cut(s) 374, 1466, 1683
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 3 cut(s) 439, 776, 820
AcuI CTGAAG 2 cut(s) 281, 1557
AfaI GTAC 4 cut(s) 6, 231, 1327, 1617
AfiI CCNNNNNNNGG 1 cut(s) 1234
AgsI TTSAA 8 cut(s) 164, 578, 781, 812, 1461, 1494, 1659, 1725
AjnI CCWGG 2 cut(s) 803, 846
AjuI GAANNNNNNNTTGG 2 cut(s) 1555, 1587
Alw21I GWGCWC 1 cut(s) 409
Alw26I GTCTC 2 cut(s) 283, 796
AlwI GGATC 3 cut(s) 374, 1466, 1683
Aor13HI TCCGGA 1 cut(s) 241
AoxI GGCC 2 cut(s) 801, 1559
ApeKI GCWGC 5 cut(s) 146, 149, 462, 641, 1689
ApoI RAATTY 3 cut(s) 439, 776, 820
ArsI GACNNNNNNTTYG 2 cut(s) 774, 806
AseI ATTAAT 1 cut(s) 98
AspS9I GGNCC 1 cut(s) 477
AsuC2I CCSGG 1 cut(s) 475
AsuHPI GGTGA 6 cut(s) 119, 361, 407, 929, 1016, 1731
AsuNHI GCTAGC 1 cut(s) 1040
AvaII GGWCC 1 cut(s) 477
BalI TGGCCA 1 cut(s) 803
BanII GRGCYC 1 cut(s) 987
BauI CACGAG 2 cut(s) 64, 402
BbsI GAAGAC 1 cut(s) 152
Bbv12I GWGCWC 1 cut(s) 409
BbvI GCAGC 5 cut(s) 136, 158, 474, 628, 1701
BccI CCATC 5 cut(s) 310, 436, 542, 1234, 1484
BceAI ACGGC 2 cut(s) 249, 1470
BciT130I CCWGG 2 cut(s) 805, 848
BclI TGATCA 2 cut(s) 901, 1114
BcnI CCSGG 1 cut(s) 475
BcoDI GTCTC 2 cut(s) 283, 796
BfaI CTAG 5 cut(s) 45, 797, 1041, 1229, 1371
BfmI CTRYAG 3 cut(s) 150, 603, 700
BfuAI ACCTGC 1 cut(s) 143
BisI GCNGC 5 cut(s) 147, 150, 463, 642, 1690
BlsI GCNGC 5 cut(s) 148, 151, 464, 643, 1691
Bme1390I CCNGG 3 cut(s) 475, 805, 848
Bme18I GGWCC 1 cut(s) 477
BmgT120I GGNCC 1 cut(s) 477
BmiI GGNNCC 3 cut(s) 478, 986, 1167
BmrFI CCNGG 3 cut(s) 475, 805, 848
BmsI GCATC 7 cut(s) 549, 1048, 1170, 1354, 1502, 1524, 1655
BmtI GCTAGC 1 cut(s) 1044
BpiI GAAGAC 1 cut(s) 152
BpmI CTGGAG 2 cut(s) 134, 1152
BpuEI CTTGAG 2 cut(s) 53, 1501
BpuMI CCSGG 1 cut(s) 475
BsaBI GATNNNNATC 1 cut(s) 1113
BsaI GGTCTC 1 cut(s) 796
BsaJI CCNNGG 1 cut(s) 847
BsaWI WCCGGW 1 cut(s) 241
BsaXI ACNNNNNCTCC 4 cut(s) 245, 275, 614, 644
Bsc4I CCNNNNNNNGG 1 cut(s) 1234
Bse1I ACTGG 2 cut(s) 1597, 1613
Bse3DI GCAATG 1 cut(s) 972
Bse8I GATNNNNATC 1 cut(s) 1113
BseAI TCCGGA 1 cut(s) 241
BseBI CCWGG 2 cut(s) 805, 848
BseDI CCNNGG 1 cut(s) 847
BseGI GGATG 6 cut(s) 91, 283, 321, 415, 952, 1646
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 1 cut(s) 1234
BseMI GCAATG 1 cut(s) 972
BseMII CTCAG 4 cut(s) 278, 539, 777, 1491
BseNI ACTGG 2 cut(s) 1597, 1613
BseRI GAGGAG 1 cut(s) 411
BseXI GCAGC 5 cut(s) 136, 158, 474, 628, 1701
BsgI GTGCAG 1 cut(s) 744
BshFI GGCC 2 cut(s) 803, 1561
BsiHKAI GWGCWC 1 cut(s) 409
BsiSI CCGG 2 cut(s) 242, 474
BslFI GGGAC 2 cut(s) 490, 869
BslI CCNNNNNNNGG 1 cut(s) 1234
BsmAI GTCTC 2 cut(s) 283, 796
BsmFI GGGAC 2 cut(s) 490, 869
BsmI GAATGC 1 cut(s) 237
BsnI GGCC 2 cut(s) 803, 1561
Bso31I GGTCTC 1 cut(s) 796
Bsp1286I GDGCHC 2 cut(s) 409, 987
Bsp13I TCCGGA 1 cut(s) 241
Bsp143I GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
BspACI CCGC 4 cut(s) 19, 425, 734, 1061
BspANI GGCC 2 cut(s) 803, 1561
BspCNI CTCAG 4 cut(s) 279, 540, 778, 1492
BspEI TCCGGA 1 cut(s) 241
BspHI TCATGA 1 cut(s) 997
BspLI GGNNCC 3 cut(s) 478, 986, 1167
BspMAI CTGCAG 2 cut(s) 154, 607
BspMI ACCTGC 1 cut(s) 143
BspOI GCTAGC 1 cut(s) 1044
BspPI GGATC 3 cut(s) 374, 1466, 1683
BspQI GCTCTTC 1 cut(s) 452
BspTNI GGTCTC 1 cut(s) 796
BsrBI CCGCTC 1 cut(s) 21
BsrDI GCAATG 1 cut(s) 972
BsrI ACTGG 2 cut(s) 1597, 1613
BssECI CCNNGG 1 cut(s) 847
BssMI GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
BssNAI GTATAC 1 cut(s) 710
BssSI CACGAG 2 cut(s) 64, 402
Bst1107I GTATAC 1 cut(s) 710
Bst2BI CACGAG 2 cut(s) 64, 402
Bst2UI CCWGG 2 cut(s) 805, 848
Bst4CI ACNGT 5 cut(s) 234, 481, 505, 1028, 1357
Bst6I CTCTTC 3 cut(s) 252, 452, 1614
BstC8I GCNNGC 3 cut(s) 930, 1042, 1629
BstDEI CTNAG 5 cut(s) 287, 548, 786, 1298, 1500
BstF5I GGATG 6 cut(s) 91, 283, 321, 415, 952, 1646
BstKTI GATC 7 cut(s) 382, 904, 1033, 1111, 1117, 1474, 1678
BstMAI GTCTC 2 cut(s) 283, 796
BstMBI GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
BstMWI GCNNNNNNNGC 2 cut(s) 270, 1454
BstNI CCWGG 2 cut(s) 805, 848
BstSCI CCNGG 3 cut(s) 473, 803, 846
BstSFI CTRYAG 3 cut(s) 150, 603, 700
BstV1I GCAGC 5 cut(s) 136, 158, 474, 628, 1701
BstV2I GAAGAC 1 cut(s) 152
BstX2I RGATCY 1 cut(s) 1471
BstYI RGATCY 1 cut(s) 1471
BstZ17I GTATAC 1 cut(s) 710
BsuRI GGCC 2 cut(s) 803, 1561
BtsCI GGATG 6 cut(s) 91, 283, 321, 415, 952, 1646
BtsIMutI CAGTG 2 cut(s) 239, 1590
BveI ACCTGC 1 cut(s) 143
Cac8I GCNNGC 3 cut(s) 930, 1042, 1629
CciI TCATGA 1 cut(s) 997
Cfr13I GGNCC 1 cut(s) 477
Csp6I GTAC 4 cut(s) 5, 230, 1326, 1616
CviAII CATG 5 cut(s) 857, 998, 1066, 1431, 1585
CviQI GTAC 4 cut(s) 5, 230, 1326, 1616
DdeI CTNAG 5 cut(s) 287, 548, 786, 1298, 1500
DpnI GATC 7 cut(s) 381, 903, 1032, 1110, 1116, 1473, 1677
DpnII GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
EaeI YGGCCR 1 cut(s) 801
Eam1104I CTCTTC 3 cut(s) 252, 452, 1614
EarI CTCTTC 3 cut(s) 252, 452, 1614
EciI GGCGGA 1 cut(s) 414
Eco24I GRGCYC 1 cut(s) 987
Eco31I GGTCTC 1 cut(s) 796
Eco47I GGWCC 1 cut(s) 477
Eco57I CTGAAG 2 cut(s) 281, 1557
EcoRI GAATTC 1 cut(s) 776
EcoRII CCWGG 2 cut(s) 803, 846
EcoT22I ATGCAT 1 cut(s) 1517
EcoT38I GRGCYC 1 cut(s) 987
FaeI CATG 5 cut(s) 860, 1001, 1069, 1434, 1588
FaqI GGGAC 2 cut(s) 490, 869
FatI CATG 5 cut(s) 856, 997, 1065, 1430, 1584
FbaI TGATCA 2 cut(s) 901, 1114
FblI GTMKAC 2 cut(s) 699, 709
Fnu4HI GCNGC 5 cut(s) 147, 150, 463, 642, 1690
FokI GGATG 6 cut(s) 98, 290, 328, 402, 959, 1633
FriOI GRGCYC 1 cut(s) 987
Fsp4HI GCNGC 5 cut(s) 147, 150, 463, 642, 1690
FspBI CTAG 5 cut(s) 45, 797, 1041, 1229, 1371
GluI GCNGC 5 cut(s) 147, 150, 463, 642, 1690
GsuI CTGGAG 2 cut(s) 134, 1152
HaeIII GGCC 2 cut(s) 803, 1561
HapII CCGG 2 cut(s) 242, 474
Hin1II CATG 5 cut(s) 860, 1001, 1069, 1434, 1588
HindIII AAGCTT 1 cut(s) 609
HinfI GANTC 5 cut(s) 92, 320, 520, 755, 1004
HpaII CCGG 2 cut(s) 242, 474
HphI GGTGA 6 cut(s) 119, 361, 407, 929, 1016, 1731
Hpy166II GTNNAC 5 cut(s) 398, 700, 710, 1187, 1250
Hpy8I GTNNAC 5 cut(s) 398, 700, 710, 1187, 1250
Hpy99I CGWCG 2 cut(s) 82, 85
HpyAV CCTTC 3 cut(s) 183, 523, 1004
HpyCH4III ACNGT 5 cut(s) 234, 481, 505, 1028, 1357
HpyF10VI GCNNNNNNNGC 2 cut(s) 270, 1454
HpyF3I CTNAG 5 cut(s) 287, 548, 786, 1298, 1500
Hsp92II CATG 5 cut(s) 860, 1001, 1069, 1434, 1588
Kpn2I TCCGGA 1 cut(s) 241
Ksp22I TGATCA 2 cut(s) 901, 1114
Kzo9I GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 4 cut(s) 26, 635, 990, 1171
Lsp1109I GCAGC 5 cut(s) 136, 158, 474, 628, 1701
LweI GCATC 7 cut(s) 549, 1048, 1170, 1354, 1502, 1524, 1655
MaeI CTAG 5 cut(s) 45, 797, 1041, 1229, 1371
MaeIII GTNAC 1 cut(s) 47
MalI GATC 7 cut(s) 381, 903, 1032, 1110, 1116, 1473, 1677
MbiI CCGCTC 1 cut(s) 21
MboI GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
MboII GAAGA 8 cut(s) 152, 269, 469, 590, 602, 1013, 1286, 1601
MflI RGATCY 1 cut(s) 1471
MhlI GDGCHC 2 cut(s) 409, 987
MlsI TGGCCA 1 cut(s) 803
MluNI TGGCCA 1 cut(s) 803
MmeI TCCRAC 5 cut(s) 39, 63, 228, 231, 1674
Mox20I TGGCCA 1 cut(s) 803
Mph1103I ATGCAT 1 cut(s) 1517
MroI TCCGGA 1 cut(s) 241
MscI TGGCCA 1 cut(s) 803
MseI TTAA 6 cut(s) 98, 122, 738, 1014, 1200, 1713
Msp20I TGGCCA 1 cut(s) 803
MspA1I CMGCKG 1 cut(s) 149
MspI CCGG 2 cut(s) 242, 474
MspR9I CCNGG 3 cut(s) 475, 805, 848
Mva1269I GAATGC 1 cut(s) 237
MvaI CCWGG 2 cut(s) 805, 848
MwoI GCNNNNNNNGC 2 cut(s) 270, 1454
NciI CCSGG 1 cut(s) 475
NdeII GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
NheI GCTAGC 1 cut(s) 1040
NlaIII CATG 5 cut(s) 860, 1001, 1069, 1434, 1588
NlaIV GGNNCC 3 cut(s) 478, 986, 1167
NsiI ATGCAT 1 cut(s) 1517
PagI TCATGA 1 cut(s) 997
PaqCI CACCTGC 1 cut(s) 143
PciSI GCTCTTC 1 cut(s) 452
PctI GAATGC 1 cut(s) 237
PfeI GAWTC 5 cut(s) 92, 320, 520, 755, 1004
PkrI GCNGC 5 cut(s) 148, 151, 464, 643, 1691
PshBI ATTAAT 1 cut(s) 98
Psp6I CCWGG 2 cut(s) 803, 846
PspGI CCWGG 2 cut(s) 803, 846
PspN4I GGNNCC 3 cut(s) 478, 986, 1167
PspPI GGNCC 1 cut(s) 477
PstI CTGCAG 2 cut(s) 154, 607
PsuI RGATCY 1 cut(s) 1471
PvuII CAGCTG 1 cut(s) 149
RsaI GTAC 4 cut(s) 6, 231, 1327, 1617
RsaNI GTAC 4 cut(s) 5, 230, 1326, 1616
SapI GCTCTTC 1 cut(s) 452
SaqAI TTAA 6 cut(s) 98, 122, 738, 1014, 1200, 1713
SatI GCNGC 5 cut(s) 147, 150, 463, 642, 1690
Sau3AI GATC 7 cut(s) 379, 901, 1030, 1108, 1114, 1471, 1675
Sau96I GGNCC 1 cut(s) 477
ScrFI CCNGG 3 cut(s) 475, 805, 848
SduI GDGCHC 2 cut(s) 409, 987
SfaNI GCATC 7 cut(s) 549, 1048, 1170, 1354, 1502, 1524, 1655
SfcI CTRYAG 3 cut(s) 150, 603, 700
SinI GGWCC 1 cut(s) 477
SmlI CTYRAG 2 cut(s) 32, 1480
SmoI CTYRAG 2 cut(s) 32, 1480
SsiI CCGC 4 cut(s) 19, 425, 734, 1061
SspI AATATT 1 cut(s) 219
SspMI CTAG 5 cut(s) 45, 797, 1041, 1229, 1371
StyD4I CCNGG 3 cut(s) 473, 803, 846
TaaI ACNGT 5 cut(s) 234, 481, 505, 1028, 1357
TaqI TCGA 4 cut(s) 59, 90, 621, 749
TatI WGTACW 2 cut(s) 229, 1325
TfiI GAWTC 5 cut(s) 92, 320, 520, 755, 1004
Tru1I TTAA 6 cut(s) 98, 122, 738, 1014, 1200, 1713
Tru9I TTAA 6 cut(s) 98, 122, 738, 1014, 1200, 1713
TscAI CASTG 2 cut(s) 239, 1597
TseI GCWGC 5 cut(s) 146, 149, 462, 641, 1689
TspGWI ACGGA 3 cut(s) 194, 906, 1170
TspRI CASTG 2 cut(s) 239, 1597
VpaK11BI GGWCC 1 cut(s) 477
VspI ATTAAT 1 cut(s) 98
XapI RAATTY 3 cut(s) 439, 776, 820
XcmI CCANNNNNNNNNTGG 1 cut(s) 1141
XmiI GTMKAC 2 cut(s) 699, 709
XspI CTAG 5 cut(s) 45, 797, 1041, 1229, 1371
Zsp2I ATGCAT 1 cut(s) 1517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.