Rw4G015240

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
35003805 .. 35006875
3071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015240.1

Sequence Viewer

Length: 2025 bp
ATGGGTTTCTCAATCTGGTTGCTTCTTTTCTTAATCTTAGACCTCATTGTTGTTCCTACCTTAGCCCAAGATTGCTCTCGACGTGACTTCTGCTGGACATGTTCCAATACGGGCAGTTACACTAATGGCAGCATGTACGAACAAAATCTCAACAGCCTCCTCTCCTCCTTCTCTTCCAGCCCTACCCAAAACCAAGCTAACTCCGGCTTTTACAACTCTTCTCTCGGGCAAGACTCCAACAAAGTGAATGCAATTGCAATGTGCCGAGGAGACCTCGGACTCAAAGCCTGTAGTAGCTGTCTCAAGAACAACAGTGTCAATCTGTTGCAAACATGTTTGTATCAAAGGGAAGCAACCTTATGGGCCCCCCATTGTGTGGTACGTTACTCGGACAACTCGATATTTGGTATCGAGAAAGACGATCCTAGTGTGTACGTCCCAAGCCAAAAAAATGTGTCAGACGCCCAAGAGTACGAGCGGGTGCTAAACCCCTTGTTGCAATATTTAAGTGACAAAGCTGCTTCAGGGGATTCTGTTAAAAAGTACGCAGCAGGACATGCAACAGTTCCGGGAAGGGAAATTATATATGCACTTGTGCAGTGCACTCCGGATTTAGACAACCAAAATTGCAGTAATTGCCTTAAAAAGGCCATGTCTGATATTCAGGGCCATATTGGTGCAAAGCGAGGAGGACGAGTTCTTAAACCGAGCTGTACTCTAAGGTATGAGGCCGATCTTTTCTACGAGGCTACATCAGATTCAATAGTAAATGTTTCAACTCCGGTTACTCCAACAACTCCAACAACTCCAGTAACTCCACCATCAGTTCCATCCAAGCAAGGAAAGAGGAGTAACACAAAAAAAACTATTATCATCATCATCATTGTGGTTGTGATTGCATTTGTTACTATGCTTTTCACCGGCATATGCATTTTCTCAAGAGTGAAGCAACAAAGGGGGAAACTTGAAAGTAGGTTATATATGTATGATAATTCAGAAAAATTTAGTTTTGAGGATTCATTACAATATGACTTTGAAATTATAAGATCTGCGACCAATGACTTTTCTGATGCCAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTATGTTATTAAACGGACAGCATATTGCAGTGAAAAGGCTCTGTAAGAATTCTGAACAGGGTGAACGGGAATTTAAAAATGAAGTCATGTTACTCGCTCAACTTCAACACCGGAACGTAGTAAGGCTCCTAGGCTTTTGCTTGACAGGGGAGGAAAGGCTCCTCATTTACGAATATATACCTAATACAAGTCTTAATCACTTCATTTTTGATCCAATCAATCATGGACATTTAGATTGGCAAACACGCTACAAAATTATAGGAGGAATTGGCCGCGGTCTTCTTTACCTCCATGAAGATTCTCGCCTTCGAATTATTCACCGGGATCTCAAACCTAGCAACATTCTGCTAGGTGAAGATATGAACCCTAAAATTGCAGATTTTGGCCTGGCAAAATTATTTGTCATGGATCAAACTCAAGGGGATACAAAGATCATTGTTGGGACCTATGGATATATGGCACCAGAATATGCAATTCACGGCCGCTTTTCTGTCAAGTCGGATGTCTTCAGTTTTGGTGTGTTGGTTCTTGAGATGGTTAGTGGTAAGAAGATTGGAAGTTTTCGGAATGGTGAGAATGAGGAGGACCTTTTAAGCTATGCTTGGAGAAATTGGAGGAGCGATGCAATTCCAAATATCATAGATCCCATGTTGACAATAGGGTCAAGAAATGAAATGATCAGATGCATCCACATTGGTTTACTATGTGTCCAAGAAAATGTGAATGACAGACCAATCATGGCTTCTGTTGTTTCCATGCTTAACAGTCACTCTCTCACACTCCCATTACCTTCAAAACCACCATATTATTCACACTATAACACTGATTCAGATACATTAAGGTCTGCCAAAAGCTCTGTGTATGTGTCGAGAAATCAAGTTTCAAACATTACAGAACCGTATCCTCGCTAG

Protein Analysis

674

Amino Acids

75.44

Weight (kDa)

8.18

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 33 - 131 6.5e-21 Salt stress response/antifungal
Stress-antifung PF01657 150 - 244 1.8e-13 Salt stress response/antifungal
Pkinase PF00069 356 - 564 2.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 359 - 622 5.7e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1043
AasI GACNNNNNNGTC 1 cut(s) 1774
AccB1I GGYRCC 1 cut(s) 1573
AccB7I CCANNNNNTGG 1 cut(s) 376
AccBSI CCGCTC 1 cut(s) 478
AccII CGCG 1 cut(s) 1389
AccIII TCCGGA 1 cut(s) 607
AciI CCGC 4 cut(s) 478, 1387, 1389, 1597
AclWI GGATC 5 cut(s) 416, 1319, 1446, 1530, 1751
AcoI YGGCCR 2 cut(s) 1384, 1594
AcsI RAATTY 3 cut(s) 1001, 1162, 1184
AcuI CTGAAG 2 cut(s) 507, 1606
AcyI GRCGYC 1 cut(s) 462
AfaI GTAC 6 cut(s) 137, 381, 434, 473, 545, 715
AfiI CCNNNNNNNGG 2 cut(s) 376, 646
AflIII ACRYGT 2 cut(s) 98, 332
AgsI TTSAA 7 cut(s) 762, 777, 968, 1037, 1220, 1908, 1998
AjiI CACGTC 1 cut(s) 83
AjnI CCWGG 1 cut(s) 1500
AjuI GAANNNNNNNTTGG 2 cut(s) 1840, 1872
AloI GAACNNNNNNTCC 2 cut(s) 681, 713
AluBI AGCT 8 cut(s) 197, 297, 518, 711, 1081, 1103, 1710, 1968
AluI AGCT 8 cut(s) 197, 297, 518, 711, 1081, 1103, 1710, 1968
Alw21I GWGCWC 1 cut(s) 605
Alw26I GTCTC 2 cut(s) 264, 305
Alw44I GTGCAC 1 cut(s) 601
AlwI GGATC 5 cut(s) 416, 1319, 1446, 1530, 1751
Ama87I CYCGRG 1 cut(s) 224
Aor13HI TCCGGA 1 cut(s) 607
AoxI GGCC 7 cut(s) 363, 648, 667, 729, 1384, 1498, 1594
ApaI GGGCCC 1 cut(s) 367
ApaLI GTGCAC 1 cut(s) 601
ApeKI GCWGC 3 cut(s) 129, 518, 548
ApoI RAATTY 3 cut(s) 1001, 1162, 1184
AspA2I CCTAGG 1 cut(s) 1243
AspS9I GGNCC 5 cut(s) 363, 364, 667, 1557, 1699
AsuC2I CCSGG 2 cut(s) 570, 1436
AsuHPI GGTGA 5 cut(s) 910, 1187, 1424, 1478, 1697
AsuII TTCGAA 1 cut(s) 1423
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 2 cut(s) 1557, 1699
AvrII CCTAGG 1 cut(s) 1243
BaeGI GKGCMC 2 cut(s) 367, 605
BanI GGYRCC 1 cut(s) 1573
BanII GRGCYC 1 cut(s) 367
BarI GAAGNNNNNNTAC 2 cut(s) 1188, 1220
BbsI GAAGAC 2 cut(s) 1385, 1612
Bbv12I GWGCWC 1 cut(s) 605
BbvI GCAGC 3 cut(s) 141, 505, 560
BccI CCATC 3 cut(s) 829, 838, 1642
BceAI ACGGC 1 cut(s) 1609
BciT130I CCWGG 1 cut(s) 1502
BciVI GTATCC 2 cut(s) 1531, 2025
BclI TGATCA 1 cut(s) 1791
BcnI CCSGG 2 cut(s) 570, 1436
BcoDI GTCTC 2 cut(s) 264, 305
BfaI CTAG 5 cut(s) 426, 1244, 1449, 1463, 2023
BfmI CTRYAG 1 cut(s) 289
BfuI GTATCC 2 cut(s) 1531, 2025
BglII AGATCT 1 cut(s) 1046
BisI GCNGC 5 cut(s) 130, 519, 549, 1387, 1597
BlnI CCTAGG 1 cut(s) 1243
BlsI GCNGC 5 cut(s) 131, 520, 550, 1388, 1598
Bme1390I CCNGG 3 cut(s) 570, 1436, 1502
Bme18I GGWCC 2 cut(s) 1557, 1699
BmeT110I CYCGRG 1 cut(s) 224
BmgBI CACGTC 1 cut(s) 83
BmgT120I GGNCC 5 cut(s) 363, 364, 667, 1557, 1699
BmiI GGNNCC 6 cut(s) 365, 366, 1241, 1274, 1558, 1575
BmrFI CCNGG 3 cut(s) 570, 1436, 1502
BmsI GCATC 4 cut(s) 1060, 1726, 1787, 1809
BpiI GAAGAC 2 cut(s) 1385, 1612
BplI GAGNNNNNCTC 4 cut(s) 258, 290, 700, 732
BpmI CTGGAG 1 cut(s) 792
Bpu10I CCTNAGC 1 cut(s) 61
Bpu14I TTCGAA 1 cut(s) 1423
BpuEI CTTGAG 4 cut(s) 287, 922, 1515, 1664
BpuMI CCSGG 2 cut(s) 570, 1436
BsaHI GRCGYC 1 cut(s) 462
BsaI GGTCTC 1 cut(s) 264
BsaJI CCNNGG 4 cut(s) 265, 274, 1243, 1387
BsaWI WCCGGW 3 cut(s) 607, 781, 1224
BsaXI ACNNNNNCTCC 2 cut(s) 681, 711
Bsc4I CCNNNNNNNGG 2 cut(s) 376, 646
Bse118I RCCGGY 1 cut(s) 920
Bse1I ACTGG 1 cut(s) 809
Bse3DI GCAATG 1 cut(s) 264
BseAI TCCGGA 1 cut(s) 607
BseBI CCWGG 1 cut(s) 1502
BseDI CCNNGG 4 cut(s) 265, 274, 1243, 1387
BseGI GGATG 3 cut(s) 830, 1621, 1800
BseLI CCNNNNNNNGG 2 cut(s) 376, 646
BseMI GCAATG 1 cut(s) 264
BseNI ACTGG 1 cut(s) 809
BseRI GAGGAG 8 cut(s) 149, 154, 282, 702, 862, 1265, 1709, 1744
BseSI GKGCMC 2 cut(s) 367, 605
BseX3I CGGCCG 1 cut(s) 1594
BseXI GCAGC 3 cut(s) 141, 505, 560
BsgI GTGCAG 1 cut(s) 617
Bsh1236I CGCG 1 cut(s) 1389
Bsh1285I CGRYCG 1 cut(s) 1597
BshFI GGCC 7 cut(s) 365, 650, 669, 731, 1386, 1500, 1596
BshNI GGYRCC 1 cut(s) 1573
BsiEI CGRYCG 1 cut(s) 1597
BsiHKAI GWGCWC 1 cut(s) 605
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 7 cut(s) 204, 569, 608, 782, 921, 1225, 1435
BslFI GGGAC 2 cut(s) 422, 1570
BslI CCNNNNNNNGG 2 cut(s) 376, 646
BsmAI GTCTC 2 cut(s) 264, 305
BsmFI GGGAC 2 cut(s) 422, 1570
BsmI GAATGC 1 cut(s) 253
BsnI GGCC 7 cut(s) 365, 650, 669, 731, 1386, 1500, 1596
Bso31I GGTCTC 1 cut(s) 264
BsoBI CYCGRG 1 cut(s) 224
Bsp119I TTCGAA 1 cut(s) 1423
Bsp120I GGGCCC 1 cut(s) 363
Bsp1286I GDGCHC 2 cut(s) 367, 605
Bsp13I TCCGGA 1 cut(s) 607
Bsp143I GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
BspACI CCGC 4 cut(s) 478, 1387, 1389, 1597
BspANI GGCC 7 cut(s) 365, 650, 669, 731, 1386, 1500, 1596
BspEI TCCGGA 1 cut(s) 607
BspFNI CGCG 1 cut(s) 1389
BspLI GGNNCC 6 cut(s) 365, 366, 1241, 1274, 1558, 1575
BspPI GGATC 5 cut(s) 416, 1319, 1446, 1530, 1751
BspT104I TTCGAA 1 cut(s) 1423
BspT107I GGYRCC 1 cut(s) 1573
BspTNI GGTCTC 1 cut(s) 264
BsrBI CCGCTC 1 cut(s) 478
BsrDI GCAATG 1 cut(s) 264
BsrFI RCCGGY 1 cut(s) 920
BsrI ACTGG 1 cut(s) 809
BssAI RCCGGY 1 cut(s) 920
BssECI CCNNGG 4 cut(s) 265, 274, 1243, 1387
BssMI GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
BssNI GRCGYC 1 cut(s) 462
BssT1I CCWWGG 1 cut(s) 1243
Bst2UI CCWGG 1 cut(s) 1502
Bst4CI ACNGT 4 cut(s) 314, 565, 1880, 2013
Bst6I CTCTTC 2 cut(s) 178, 223
BstACI GRCGYC 1 cut(s) 462
BstAPI GCANNNNNTGC 2 cut(s) 557, 636
BstBI TTCGAA 1 cut(s) 1423
BstDEI CTNAG 3 cut(s) 37, 61, 719
BstDSI CCRYGG 1 cut(s) 1387
BstENI CCTNNNNNAGG 1 cut(s) 644
BstF5I GGATG 3 cut(s) 830, 1621, 1800
BstFNI CGCG 1 cut(s) 1389
BstKTI GATC 9 cut(s) 424, 736, 1049, 1327, 1441, 1525, 1548, 1759, 1794
BstMAI GTCTC 2 cut(s) 264, 305
BstMBI GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
BstMCI CGRYCG 1 cut(s) 1597
BstMWI GCNNNNNNNGC 2 cut(s) 557, 636
BstNI CCWGG 1 cut(s) 1502
BstNSI RCATGY 4 cut(s) 102, 136, 336, 560
BstSCI CCNGG 3 cut(s) 568, 1434, 1500
BstSFI CTRYAG 1 cut(s) 289
BstSLI GKGCMC 2 cut(s) 367, 605
BstUI CGCG 1 cut(s) 1389
BstV1I GCAGC 3 cut(s) 141, 505, 560
BstV2I GAAGAC 2 cut(s) 1385, 1612
BstX2I RGATCY 3 cut(s) 1046, 1438, 1756
BstYI RGATCY 3 cut(s) 1046, 1438, 1756
BstZI CGGCCG 1 cut(s) 1594
BsuI GTATCC 2 cut(s) 1531, 2025
BsuRI GGCC 7 cut(s) 365, 650, 669, 731, 1386, 1500, 1596
BtgI CCRYGG 1 cut(s) 1387
BtgZI GCGATG 1 cut(s) 1749
BtrI CACGTC 1 cut(s) 83
BtsCI GGATG 3 cut(s) 830, 1621, 1800
BtsI GCAGTG 2 cut(s) 605, 1149
BtsIMutI CAGTG 4 cut(s) 319, 605, 1149, 1935
Cfr10I RCCGGY 1 cut(s) 920
Cfr13I GGNCC 5 cut(s) 363, 364, 667, 1557, 1699
Cfr42I CCGCGG 1 cut(s) 1390
CseI GACGC 1 cut(s) 470
Csp6I GTAC 6 cut(s) 136, 380, 433, 472, 544, 714
CviQI GTAC 6 cut(s) 136, 380, 433, 472, 544, 714
DdeI CTNAG 3 cut(s) 37, 61, 719
DpnI GATC 9 cut(s) 423, 735, 1048, 1326, 1440, 1524, 1547, 1758, 1793
DpnII GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
DraI TTTAAA 1 cut(s) 1189
DrdI GACNNNNNNGTC 1 cut(s) 1774
DseDI GACNNNNNNGTC 1 cut(s) 1774
EaeI YGGCCR 2 cut(s) 1384, 1594
EagI CGGCCG 1 cut(s) 1594
Eam1104I CTCTTC 2 cut(s) 178, 223
EarI CTCTTC 2 cut(s) 178, 223
EclXI CGGCCG 1 cut(s) 1594
Eco130I CCWWGG 1 cut(s) 1243
Eco24I GRGCYC 1 cut(s) 367
Eco31I GGTCTC 1 cut(s) 264
Eco47I GGWCC 2 cut(s) 1557, 1699
Eco52I CGGCCG 1 cut(s) 1594
Eco57I CTGAAG 2 cut(s) 507, 1606
Eco88I CYCGRG 1 cut(s) 224
EcoNI CCTNNNNNAGG 1 cut(s) 644
EcoO109I RGGNCCY 3 cut(s) 364, 1557, 1699
EcoRI GAATTC 1 cut(s) 1162
EcoRII CCWGG 1 cut(s) 1500
EcoT14I CCWWGG 1 cut(s) 1243
EcoT22I ATGCAT 2 cut(s) 932, 1802
EcoT38I GRGCYC 1 cut(s) 367
ErhI CCWWGG 1 cut(s) 1243
FalI AAGNNNNNCTT 2 cut(s) 1699, 1731
FaqI GGGAC 2 cut(s) 422, 1570
FauI CCCGC 1 cut(s) 471
FauNDI CATATG 1 cut(s) 926
FbaI TGATCA 1 cut(s) 1791
Fnu4HI GCNGC 5 cut(s) 130, 519, 549, 1387, 1597
FokI GGATG 3 cut(s) 817, 1628, 1787
FriOI GRGCYC 1 cut(s) 367
Fsp4HI GCNGC 5 cut(s) 130, 519, 549, 1387, 1597
FspBI CTAG 5 cut(s) 426, 1244, 1449, 1463, 2023
GluI GCNGC 5 cut(s) 130, 519, 549, 1387, 1597
GsuI CTGGAG 1 cut(s) 792
HaeIII GGCC 7 cut(s) 365, 650, 669, 731, 1386, 1500, 1596
HapII CCGG 7 cut(s) 204, 569, 608, 782, 921, 1225, 1435
HgaI GACGC 1 cut(s) 470
Hin1I GRCGYC 1 cut(s) 462
HincII GTYRAC 1 cut(s) 1767
HindII GTYRAC 1 cut(s) 1767
HindIII AAGCTT 1 cut(s) 1079
HinfI GANTC 7 cut(s) 233, 279, 530, 758, 1016, 1412, 1940
HpaII CCGG 7 cut(s) 204, 569, 608, 782, 921, 1225, 1435
HphI GGTGA 5 cut(s) 910, 1187, 1424, 1478, 1697
Hpy166II GTNNAC 6 cut(s) 433, 603, 1108, 1178, 1767, 1814
Hpy188III TCNNGA 8 cut(s) 78, 304, 412, 608, 939, 1643, 1779, 1983
Hpy8I GTNNAC 6 cut(s) 433, 603, 1108, 1178, 1767, 1814
Hpy99I CGWCG 1 cut(s) 84
HpyAV CCTTC 4 cut(s) 178, 567, 1430, 1914
HpyCH4III ACNGT 4 cut(s) 314, 565, 1880, 2013
HpyCH4IV ACGT 4 cut(s) 82, 382, 435, 1230
HpyF10VI GCNNNNNNNGC 2 cut(s) 557, 636
HpyF3I CTNAG 3 cut(s) 37, 61, 719
HpySE526I ACGT 4 cut(s) 82, 382, 435, 1230
Hsp92I GRCGYC 1 cut(s) 462
Kpn2I TCCGGA 1 cut(s) 607
Ksp22I TGATCA 1 cut(s) 1791
KspI CCGCGG 1 cut(s) 1390
Kzo9I GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
LmnI GCTCC 4 cut(s) 1100, 1245, 1278, 1731
Lsp1109I GCAGC 3 cut(s) 141, 505, 560
LweI GCATC 4 cut(s) 1060, 1726, 1787, 1809
MaeI CTAG 5 cut(s) 426, 1244, 1449, 1463, 2023
MaeII ACGT 4 cut(s) 82, 382, 435, 1230
MalI GATC 9 cut(s) 423, 735, 1048, 1326, 1440, 1524, 1547, 1758, 1793
MbiI CCGCTC 1 cut(s) 478
MboI GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
MboII GAAGA 7 cut(s) 165, 210, 1385, 1421, 1481, 1612, 1675
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 3 cut(s) 1046, 1438, 1756
MhlI GDGCHC 2 cut(s) 367, 605
MlyI GAGTC 2 cut(s) 227, 273
MmeI TCCRAC 4 cut(s) 261, 815, 824, 1593
Mph1103I ATGCAT 2 cut(s) 932, 1802
MroI TCCGGA 1 cut(s) 607
MslI CAYNNNNRTG 2 cut(s) 675, 884
MspA1I CMGCKG 1 cut(s) 1389
MspI CCGG 7 cut(s) 204, 569, 608, 782, 921, 1225, 1435
MspR9I CCNGG 3 cut(s) 570, 1436, 1502
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 253
MvaI CCWGG 1 cut(s) 1502
MvnI CGCG 1 cut(s) 1389
MwoI GCNNNNNNNGC 2 cut(s) 557, 636
NciI CCSGG 2 cut(s) 570, 1436
NdeI CATATG 1 cut(s) 926
NdeII GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
NlaIV GGNNCC 6 cut(s) 365, 366, 1241, 1274, 1558, 1575
NmeAIII GCCGAG 1 cut(s) 290
NmuCI GTSAC 3 cut(s) 83, 509, 1880
NsiI ATGCAT 2 cut(s) 932, 1802
NspI RCATGY 4 cut(s) 102, 136, 336, 560
NspV TTCGAA 1 cut(s) 1423
PciI ACATGT 2 cut(s) 98, 332
PcsI WCGNNNNNNNCGW 2 cut(s) 395, 417
PctI GAATGC 1 cut(s) 253
PfeI GAWTC 5 cut(s) 530, 758, 1016, 1412, 1940
PflMI CCANNNNNTGG 1 cut(s) 376
PfoI TCCNGGA 1 cut(s) 568
PkrI GCNGC 5 cut(s) 131, 520, 550, 1388, 1598
PleI GAGTC 2 cut(s) 227, 273
PpsI GAGTC 2 cut(s) 227, 273
PpuMI RGGWCCY 2 cut(s) 1557, 1699
PscI ACATGT 2 cut(s) 98, 332
PsiI TTATAA 1 cut(s) 1043
Psp5II RGGWCCY 2 cut(s) 1557, 1699
Psp6I CCWGG 1 cut(s) 1500
PspGI CCWGG 1 cut(s) 1500
PspN4I GGNNCC 6 cut(s) 365, 366, 1241, 1274, 1558, 1575
PspOMI GGGCCC 1 cut(s) 363
PspPI GGNCC 5 cut(s) 363, 364, 667, 1557, 1699
PspPPI RGGWCCY 2 cut(s) 1557, 1699
PsuI RGATCY 3 cut(s) 1046, 1438, 1756
RsaI GTAC 6 cut(s) 137, 381, 434, 473, 545, 715
RsaNI GTAC 6 cut(s) 136, 380, 433, 472, 544, 714
RseI CAYNNNNRTG 2 cut(s) 675, 884
SacII CCGCGG 1 cut(s) 1390
SatI GCNGC 5 cut(s) 130, 519, 549, 1387, 1597
Sau3AI GATC 9 cut(s) 421, 733, 1046, 1324, 1438, 1522, 1545, 1756, 1791
Sau96I GGNCC 5 cut(s) 363, 364, 667, 1557, 1699
SchI GAGTC 2 cut(s) 227, 273
ScrFI CCNGG 3 cut(s) 570, 1436, 1502
SduI GDGCHC 2 cut(s) 367, 605
SfaNI GCATC 4 cut(s) 1060, 1726, 1787, 1809
SfcI CTRYAG 1 cut(s) 289
Sfr303I CCGCGG 1 cut(s) 1390
SfuI TTCGAA 1 cut(s) 1423
SgrBI CCGCGG 1 cut(s) 1390
SinI GGWCC 2 cut(s) 1557, 1699
SmiMI CAYNNNNRTG 2 cut(s) 675, 884
SmlI CTYRAG 4 cut(s) 302, 937, 1530, 1643
SmoI CTYRAG 4 cut(s) 302, 937, 1530, 1643
SsiI CCGC 4 cut(s) 478, 1387, 1389, 1597
SspI AATATT 1 cut(s) 503
SspMI CTAG 5 cut(s) 426, 1244, 1449, 1463, 2023
StyD4I CCNGG 3 cut(s) 568, 1434, 1500
StyI CCWWGG 1 cut(s) 1243
TaaI ACNGT 4 cut(s) 314, 565, 1880, 2013
TaiI ACGT 4 cut(s) 85, 385, 438, 1233
TaqI TCGA 5 cut(s) 79, 398, 411, 1423, 1982
TatI WGTACW 1 cut(s) 713
TauI GCSGC 2 cut(s) 1389, 1599
TfiI GAWTC 5 cut(s) 530, 758, 1016, 1412, 1940
TscAI CASTG 4 cut(s) 319, 605, 1149, 1942
TseFI GTSAC 3 cut(s) 83, 509, 1880
TseI GCWGC 3 cut(s) 129, 518, 548
Tsp45I GTSAC 3 cut(s) 83, 509, 1880
TspDTI ATGAA 6 cut(s) 1008, 1209, 1306, 1422, 1490, 1800
TspGWI ACGGA 1 cut(s) 1143
TspRI CASTG 4 cut(s) 319, 605, 1149, 1942
Van91I CCANNNNNTGG 1 cut(s) 376
VneI GTGCAC 1 cut(s) 601
VpaK11BI GGWCC 2 cut(s) 1557, 1699
XagI CCTNNNNNAGG 1 cut(s) 644
XapI RAATTY 3 cut(s) 1001, 1162, 1184
XceI RCATGY 4 cut(s) 102, 136, 336, 560
XmaJI CCTAGG 1 cut(s) 1243
XspI CTAG 5 cut(s) 426, 1244, 1449, 1463, 2023
Zsp2I ATGCAT 2 cut(s) 932, 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.