Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

4420330 .. 4440113

Gene Structure 19784 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG028900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGTTTTCTCAAGTTTTGGATTTGGAATTTTCCTTTCTGTACAACTTCTGGTACTCGTTATCATTGAAGCCGTTGATCTACACTTCGTTTGTTCAAACAACAGGGGTAACTACACCAACGATAGTGTCTATCAGAAAAACCTCGACGACTTTCTCTCCTCCCTCGTCACTAATAAGAGCAGCAACGGCTATGGCTTCTACAAATCCTCTTTTGGCCAAGACGATGATGTCGTCGACAAGGTTCATGCCATCGGGCTTTGTAGACCGGATCTTATACCGGATGCTTCCCTCAGTATCTTCAACGACTCGGCATACAATCTCACAAGGGCTTGTCCAAATCAGAAGGAGGCAATCATATGGAATGGGTATTGCATGGTACGCTACTCCAACCGCTCCTTTCATCTTGAGCTTTCTCCTAGTTACAATCAATCGACCACGAGAAACCTATCGTCGTCGGATGTCGATTCATTCAATGTCGATTCATTCAATTCTGAGCTGGAGCGGTTAATCAGAGGAATGAAATATCAAGCAGCTGCAGGTGGTCTTCACAAAAAGTTTGCAACGGAAACGAGAAGGGTTATGTATTCCAACAATCAATCAATATTTGGAAAAGTACAGTGCATTCCGGACTTGTCGGAGGAAGAGTGCGGTGTCTGCTTGGATGAGGGTCTGAGACAGCTTCAGAAATGTTGTTATGGGATGGATTCTGCGACATTTGGTAATCCGAGCTGTAATTTGATGGGTAGCTACACCACCGGTAGTGTTTATCAGAAAAACCTCAACGACTTTCTCTCCTCCCTCGTCACTAATGACAGCAGCAACGGCTATGGCCTCTACAACTCCTCTTTTAGCCAAGACGATGATATCATCGACAAAGTTTATGCCATCGGGCTTTGTAGACCGGATCTTATACCGGGTGCTTCCCTCAAATCCTTCAAAGACTCGGCATACAATCTCACAAGGGCTTGTCCAAATCAAAAGGAGGCAATCATATGGAATGAGTATTGCATGGTACGCTACTCCAACCGCTCCCTTCATCTTGAGCTTTCTCCTAGCTACAATCAATCGACCACGAAAAACCTATCGTCGTCGAATGTCGTTTCATTCAATCTTGAGCTGGAGGAGTTAATCGGAGGACTGAAAAGTCAAGCAGCTGCAGGTGGTCTTCAGAAAAAGTTTGCAACGGAAAGGAAAAGGGTTACGTATTCCAACAATCAATCAATATCTGGAATCGTACAGTGCATTCCGGACTTGTCGGAGGAGGAGTGCAGTTTCTGCTTGGATGAGGGTTTGAGACAGCTTCAGAACTGTTGTTATGGGATGGATTCTGCGAGATTTGGTAATCCGATCTGCAATTTGAGGTATGATGTTTTCACCTCCAATGATCCAGCTACCACCGATGATCCAACTAAATATCATGAACCACGAGCACTATCTCCTCCTACTCCGCCATCAGCCAATGCACCCAAAAATTCAGGAGGTAAGAGTGCTGCTAAAGATCTGATGGTTCGGCTGTCCAATCACATACGTTCATGTGATGCAAATGCTGAAAAACAACACATGGAACCCGTGCTTAGTGGTTCAATGACTCCGCTTAGAGCACATGCACCAATGGCTGACCCATTGGTCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

544

Amino Acids

60.15

Weight (kDa)

5.41

Isoelectric Point (pI)

43.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	31 - 131	3.5e-18	Salt stress response/antifungal
Stress-antifung	PF01657	159 - 246	4.9e-07	Salt stress response/antifungal
Stress-antifung	PF01657	244 - 343	7.2e-16	Salt stress response/antifungal
Stress-antifung	PF01657	364 - 456	6.4e-09	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	527, 1148
AasI	GACNNNNNNGTC	3 cut(s)	227, 1143, 1625
Acc36I	ACCTGC	2 cut(s)	527, 1148
AccBSI	CCGCTC	3 cut(s)	393, 502, 1029
AccI	GTMKAC	3 cut(s)	234, 262, 898
AccIII	TCCGGA	2 cut(s)	625, 1246
AciI	CCGC	6 cut(s)	391, 502, 648, 1027, 1448, 1592
AclWI	GGATC	4 cut(s)	276, 912, 1379, 1397
AcoI	YGGCCR	1 cut(s)	214
AcsI	RAATTY	2 cut(s)	27, 1471
AcuI	CTGAAG	3 cut(s)	665, 1151, 1286
AfaI	GTAC	6 cut(s)	42, 54, 378, 615, 1014, 1236
AgeI	ACCGGT	1 cut(s)	755
AgsI	TTSAA	8 cut(s)	68, 96, 301, 472, 487, 937, 1108, 1584
Alw21I	GWGCWC	2 cut(s)	1432, 1603
Alw26I	GTCTC	2 cut(s)	667, 1288
AlwI	GGATC	4 cut(s)	276, 912, 1379, 1397
AlwNI	CAGNNNCTG	1 cut(s)	1275
Aor13HI	TCCGGA	2 cut(s)	625, 1246
AoxI	GGCC	2 cut(s)	214, 829
ApeKI	GCWGC	7 cut(s)	180, 530, 533, 816, 1151, 1154, 1490
ApoI	RAATTY	2 cut(s)	27, 1471
AsiGI	ACCGGT	1 cut(s)	755
AsuC2I	CCSGG	1 cut(s)	915
AsuHPI	GGTGA	1 cut(s)	1366
BalI	TGGCCA	1 cut(s)	216
BauI	CACGAG	2 cut(s)	436, 1425
BbsI	GAAGAC	2 cut(s)	536, 1157
Bbv12I	GWGCWC	2 cut(s)	1432, 1603
BbvI	GCAGC	7 cut(s)	192, 520, 542, 828, 1141, 1163, 1477
BccI	CCATC	7 cut(s)	257, 694, 733, 893, 1315, 1459, 1498
BceAI	ACGGC	3 cut(s)	56, 202, 838
BcnI	CCSGG	1 cut(s)	915
BcoDI	GTCTC	2 cut(s)	667, 1288
BfaI	CTAG	2 cut(s)	417, 1053
BfmI	CTRYAG	2 cut(s)	534, 1155
BfuAI	ACCTGC	2 cut(s)	527, 1148
BglII	AGATCT	1 cut(s)	1498
BisI	GCNGC	7 cut(s)	181, 531, 534, 817, 1152, 1155, 1491
BlsI	GCNGC	7 cut(s)	182, 532, 535, 818, 1153, 1156, 1492
Bme1390I	CCNGG	1 cut(s)	915
BmiI	GGNNCC	1 cut(s)	1566
BmrFI	CCNGG	1 cut(s)	915
BmsI	GCATC	2 cut(s)	271, 1528
BpiI	GAAGAC	2 cut(s)	536, 1157
BpmI	CTGGAG	2 cut(s)	518, 1139
BpuEI	CTTGAG	3 cut(s)	425, 1061, 1133
BpuMI	CCSGG	1 cut(s)	915
BsaAI	YACGTR	1 cut(s)	1203
BsaWI	WCCGGW	6 cut(s)	265, 277, 625, 755, 901, 1246
BsaXI	ACNNNNNCTCC	8 cut(s)	140, 170, 629, 659, 776, 806, 1250, 1280
Bse118I	RCCGGY	1 cut(s)	755
BseAI	TCCGGA	2 cut(s)	625, 1246
BseGI	GGATG	6 cut(s)	286, 463, 667, 705, 1288, 1326
BseMII	CTCAG	3 cut(s)	304, 483, 662
BseRI	GAGGAG	7 cut(s)	148, 784, 832, 1136, 1274, 1277, 1428
BseXI	GCAGC	7 cut(s)	192, 520, 542, 828, 1141, 1163, 1477
BsgI	GTGCAG	1 cut(s)	1288
BshFI	GGCC	2 cut(s)	216, 831
BshTI	ACCGGT	1 cut(s)	755
BsiHKAI	GWGCWC	2 cut(s)	1432, 1603
BsiSI	CCGG	7 cut(s)	266, 278, 626, 756, 902, 914, 1247
BsmAI	GTCTC	2 cut(s)	667, 1288
BsmI	GAATGC	2 cut(s)	621, 1242
BsnI	GGCC	2 cut(s)	216, 831
Bsp1286I	GDGCHC	2 cut(s)	1432, 1603
Bsp13I	TCCGGA	2 cut(s)	625, 1246
Bsp1407I	TGTACA	1 cut(s)	40
Bsp143I	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
BspACI	CCGC	6 cut(s)	391, 502, 648, 1027, 1448, 1592
BspANI	GGCC	2 cut(s)	216, 831
BspCNI	CTCAG	3 cut(s)	303, 484, 663
BspEI	TCCGGA	2 cut(s)	625, 1246
BspHI	TCATGA	1 cut(s)	1417
BspLI	GGNNCC	1 cut(s)	1566
BspMAI	CTGCAG	2 cut(s)	538, 1159
BspMI	ACCTGC	2 cut(s)	527, 1148
BspPI	GGATC	4 cut(s)	276, 912, 1379, 1397
BsrBI	CCGCTC	3 cut(s)	393, 502, 1029
BsrFI	RCCGGY	1 cut(s)	755
BsrGI	TGTACA	1 cut(s)	40
BssAI	RCCGGY	1 cut(s)	755
BssMI	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
BssSI	CACGAG	2 cut(s)	436, 1425
Bst2BI	CACGAG	2 cut(s)	436, 1425
Bst4CI	ACNGT	3 cut(s)	618, 1239, 1310
Bst6I	CTCTTC	1 cut(s)	636
BstAPI	GCANNNNNTGC	1 cut(s)	1275
BstAUI	TGTACA	1 cut(s)	40
BstBAI	YACGTR	1 cut(s)	1203
BstDEI	CTNAG	5 cut(s)	290, 492, 671, 1574, 1595
BstF5I	GGATG	6 cut(s)	286, 463, 667, 705, 1288, 1326
BstKTI	GATC	7 cut(s)	79, 271, 907, 1350, 1387, 1405, 1501
BstMAI	GTCTC	2 cut(s)	667, 1288
BstMBI	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
BstMWI	GCNNNNNNNGC	7 cut(s)	186, 378, 654, 822, 1014, 1275, 1613
BstNSI	RCATGY	1 cut(s)	1607
BstSCI	CCNGG	1 cut(s)	913
BstSFI	CTRYAG	2 cut(s)	534, 1155
BstSNI	TACGTA	1 cut(s)	1203
BstV1I	GCAGC	7 cut(s)	192, 520, 542, 828, 1141, 1163, 1477
BstV2I	GAAGAC	2 cut(s)	536, 1157
BstX2I	RGATCY	3 cut(s)	268, 904, 1498
BstYI	RGATCY	3 cut(s)	268, 904, 1498
BsuRI	GGCC	2 cut(s)	216, 831
BtsCI	GGATG	6 cut(s)	286, 463, 667, 705, 1288, 1326
BtsIMutI	CAGTG	2 cut(s)	623, 1244
BveI	ACCTGC	2 cut(s)	527, 1148
CaiI	CAGNNNCTG	1 cut(s)	1275
CciI	TCATGA	1 cut(s)	1417
Cfr10I	RCCGGY	1 cut(s)	755
Csp6I	GTAC	6 cut(s)	41, 53, 377, 614, 1013, 1235
CspAI	ACCGGT	1 cut(s)	755
CviAII	CATG	7 cut(s)	245, 373, 1009, 1418, 1533, 1561, 1604
CviQI	GTAC	6 cut(s)	41, 53, 377, 614, 1013, 1235
DdeI	CTNAG	5 cut(s)	290, 492, 671, 1574, 1595
DpnI	GATC	7 cut(s)	78, 270, 906, 1349, 1386, 1404, 1500
DpnII	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
DrdI	GACNNNNNNGTC	3 cut(s)	227, 1143, 1625
DseDI	GACNNNNNNGTC	3 cut(s)	227, 1143, 1625
EaeI	YGGCCR	1 cut(s)	214
Eam1104I	CTCTTC	1 cut(s)	636
EarI	CTCTTC	1 cut(s)	636
EciI	GGCGGA	1 cut(s)	1437
Eco105I	TACGTA	1 cut(s)	1203
Eco32I	GATATC	1 cut(s)	865
Eco57I	CTGAAG	3 cut(s)	665, 1151, 1286
EcoRV	GATATC	1 cut(s)	865
FaeI	CATG	7 cut(s)	248, 376, 1012, 1421, 1536, 1564, 1607
FatI	CATG	7 cut(s)	244, 372, 1008, 1417, 1532, 1560, 1603
FauNDI	CATATG	2 cut(s)	356, 992
FblI	GTMKAC	3 cut(s)	234, 262, 898
Fnu4HI	GCNGC	7 cut(s)	181, 531, 534, 817, 1152, 1155, 1491
FokI	GGATG	6 cut(s)	293, 470, 674, 712, 1295, 1333
Fsp4HI	GCNGC	7 cut(s)	181, 531, 534, 817, 1152, 1155, 1491
FspBI	CTAG	2 cut(s)	417, 1053
GluI	GCNGC	7 cut(s)	181, 531, 534, 817, 1152, 1155, 1491
GsuI	CTGGAG	2 cut(s)	518, 1139
HaeIII	GGCC	2 cut(s)	216, 831
HapII	CCGG	7 cut(s)	266, 278, 626, 756, 902, 914, 1247
Hin1II	CATG	7 cut(s)	248, 376, 1012, 1421, 1536, 1564, 1607
HincII	GTYRAC	1 cut(s)	235
HindII	GTYRAC	1 cut(s)	235
HinfI	GANTC	8 cut(s)	305, 464, 479, 704, 941, 1230, 1325, 1588
HpaII	CCGG	7 cut(s)	266, 278, 626, 756, 902, 914, 1247
HphI	GGTGA	1 cut(s)	1366
Hpy166II	GTNNAC	3 cut(s)	235, 263, 899
Hpy188III	TCNNGA	8 cut(s)	404, 626, 1040, 1112, 1227, 1247, 1418, 1476
Hpy8I	GTNNAC	3 cut(s)	235, 263, 899
Hpy99I	CGWCG	6 cut(s)	149, 236, 454, 457, 1090, 1093
HpyAV	CCTTC	4 cut(s)	337, 567, 943, 1043
HpyCH4III	ACNGT	3 cut(s)	618, 1239, 1310
HpyCH4IV	ACGT	2 cut(s)	1202, 1528
HpyF10VI	GCNNNNNNNGC	7 cut(s)	186, 378, 654, 822, 1014, 1275, 1613
HpyF3I	CTNAG	5 cut(s)	290, 492, 671, 1574, 1595
HpySE526I	ACGT	2 cut(s)	1202, 1528
Hsp92II	CATG	7 cut(s)	248, 376, 1012, 1421, 1536, 1564, 1607
Kpn2I	TCCGGA	2 cut(s)	625, 1246
Kzo9I	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
LmnI	GCTCC	3 cut(s)	398, 499, 1034
Lsp1109I	GCAGC	7 cut(s)	192, 520, 542, 828, 1141, 1163, 1477
LweI	GCATC	2 cut(s)	271, 1528
MaeI	CTAG	2 cut(s)	417, 1053
MaeII	ACGT	2 cut(s)	1202, 1528
MaeIII	GTNAC	5 cut(s)	107, 166, 419, 802, 1198
MalI	GATC	7 cut(s)	78, 270, 906, 1349, 1386, 1404, 1500
MbiI	CCGCTC	3 cut(s)	393, 502, 1029
MboI	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
MboII	GAAGA	4 cut(s)	289, 536, 653, 1157
MflI	RGATCY	3 cut(s)	268, 904, 1498
MhlI	GDGCHC	2 cut(s)	1432, 1603
MlsI	TGGCCA	1 cut(s)	216
MluCI	AATT	5 cut(s)	27, 487, 733, 1354, 1471
MluNI	TGGCCA	1 cut(s)	216
MlyI	GAGTC	3 cut(s)	299, 935, 1582
MmeI	TCCRAC	8 cut(s)	411, 435, 612, 615, 1047, 1233, 1236, 1430
Mox20I	TGGCCA	1 cut(s)	216
MroI	TCCGGA	2 cut(s)	625, 1246
MscI	TGGCCA	1 cut(s)	216
MseI	TTAA	2 cut(s)	506, 1127
Msp20I	TGGCCA	1 cut(s)	216
MspA1I	CMGCKG	2 cut(s)	533, 1154
MspI	CCGG	7 cut(s)	266, 278, 626, 756, 902, 914, 1247
MspR9I	CCNGG	1 cut(s)	915
Mva1269I	GAATGC	2 cut(s)	621, 1242
MwoI	GCNNNNNNNGC	7 cut(s)	186, 378, 654, 822, 1014, 1275, 1613
NciI	CCSGG	1 cut(s)	915
NdeI	CATATG	2 cut(s)	356, 992
NdeII	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
NlaIII	CATG	7 cut(s)	248, 376, 1012, 1421, 1536, 1564, 1607
NlaIV	GGNNCC	1 cut(s)	1566
NmeAIII	GCCGAG	2 cut(s)	287, 923
NmuCI	GTSAC	2 cut(s)	166, 802
NspI	RCATGY	1 cut(s)	1607
PagI	TCATGA	1 cut(s)	1417
PaqCI	CACCTGC	2 cut(s)	527, 1148
PcsI	WCGNNNNNNNCGW	1 cut(s)	228
PctI	GAATGC	2 cut(s)	621, 1242
PfeI	GAWTC	5 cut(s)	464, 479, 704, 1230, 1325
PinAI	ACCGGT	1 cut(s)	755
PkrI	GCNGC	7 cut(s)	182, 532, 535, 818, 1153, 1156, 1492
PleI	GAGTC	3 cut(s)	299, 935, 1582
PpsI	GAGTC	3 cut(s)	299, 935, 1582
Ppu21I	YACGTR	1 cut(s)	1203
PspN4I	GGNNCC	1 cut(s)	1566
PstI	CTGCAG	2 cut(s)	538, 1159
PstNI	CAGNNNCTG	1 cut(s)	1275
PsuI	RGATCY	3 cut(s)	268, 904, 1498
PvuII	CAGCTG	2 cut(s)	533, 1154
RsaI	GTAC	6 cut(s)	42, 54, 378, 615, 1014, 1236
RsaNI	GTAC	6 cut(s)	41, 53, 377, 614, 1013, 1235
SalI	GTCGAC	1 cut(s)	233
SaqAI	TTAA	2 cut(s)	506, 1127
SatI	GCNGC	7 cut(s)	181, 531, 534, 817, 1152, 1155, 1491
Sau3AI	GATC	7 cut(s)	76, 268, 904, 1347, 1384, 1402, 1498
SchI	GAGTC	3 cut(s)	299, 935, 1582
ScrFI	CCNGG	1 cut(s)	915
SduI	GDGCHC	2 cut(s)	1432, 1603
SfaNI	GCATC	2 cut(s)	271, 1528
SfcI	CTRYAG	2 cut(s)	534, 1155
SmlI	CTYRAG	4 cut(s)	10, 404, 1040, 1112
SmoI	CTYRAG	4 cut(s)	10, 404, 1040, 1112
SnaBI	TACGTA	1 cut(s)	1203
Sse9I	AATT	5 cut(s)	27, 487, 733, 1354, 1471
SsiI	CCGC	6 cut(s)	391, 502, 648, 1027, 1448, 1592
SspI	AATATT	1 cut(s)	603
SspMI	CTAG	2 cut(s)	417, 1053
StyD4I	CCNGG	1 cut(s)	913
TaaI	ACNGT	3 cut(s)	618, 1239, 1310
TaiI	ACGT	2 cut(s)	1205, 1531
TaqI	TCGA	9 cut(s)	144, 234, 431, 462, 477, 870, 1067, 1091, 1629
TasI	AATT	5 cut(s)	27, 487, 733, 1354, 1471
TatI	WGTACW	2 cut(s)	40, 613
TfiI	GAWTC	5 cut(s)	464, 479, 704, 1230, 1325
Tru1I	TTAA	2 cut(s)	506, 1127
Tru9I	TTAA	2 cut(s)	506, 1127
TscAI	CASTG	2 cut(s)	623, 1244
TseFI	GTSAC	2 cut(s)	166, 802
TseI	GCWGC	7 cut(s)	180, 530, 533, 816, 1151, 1154, 1490
Tsp45I	GTSAC	2 cut(s)	166, 802
TspDTI	ATGAA	9 cut(s)	233, 389, 456, 471, 533, 1025, 1092, 1434, 1521
TspGWI	ACGGA	2 cut(s)	578, 1199
TspRI	CASTG	2 cut(s)	623, 1244
XapI	RAATTY	2 cut(s)	27, 1471
XceI	RCATGY	1 cut(s)	1607
XmiI	GTMKAC	3 cut(s)	234, 262, 898
XspI	CTAG	2 cut(s)	417, 1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.